View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19717_low_32 (Length: 247)
Name: NF19717_low_32
Description: NF19717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19717_low_32 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 6 - 247
Target Start/End: Original strand, 34261738 - 34261979
Alignment:
| Q |
6 |
gaagaatataaagaaaataatctaaattattcttttcttgagagaagttaaagaacaagattttagatttggatcaaaagtgcatgacacacccttttgt |
105 |
Q |
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| T |
34261738 |
gaagaatataaagaaaataatctaaattattcttttcttgagagaagttaaagaacaagattttagatttggatcaaaagtgcatgacacacccttttgt |
34261837 |
T |
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| Q |
106 |
cagttaaccatgatgcttcataattacaaaacataatttcaaaatttgaagaaaaattctatgcttgtagctattaaagtagctcttttctttattcttt |
205 |
Q |
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| T |
34261838 |
cagttaaccatgaggcttcataattacaaaacataatttcaaaatttgaagaaaaattccatgcttgtagctattaaagtagctcttttctttattcttt |
34261937 |
T |
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| Q |
206 |
gaaatcaacctttttctttttcaattattccaaaacatagtt |
247 |
Q |
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| T |
34261938 |
gaaatcaacctttttctttttcaattattccaaaacatagtt |
34261979 |
T |
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