View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19718_high_14 (Length: 315)
Name: NF19718_high_14
Description: NF19718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19718_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 44370356 - 44370099
Alignment:
| Q |
18 |
tttgtttgggttgtaaataagataattttcgggtttgtttaaatgcaacattactatcaaatgagagaacgtgtttgacttgatttgtagttgtatatat |
117 |
Q |
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| T |
44370356 |
tttgtttgggttgtaaataagataattttcgggtttgtttaaatgcaacattactatcaaatgagagaacgtgtttgacttgatttgtagttgtatatat |
44370257 |
T |
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| Q |
118 |
tttgtggaaattagttcctagtttgtagttgttcatggcacaaaacggaacaattgcttagacagacgaacccatttatgttttgctgaatgaaaggaaa |
217 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
44370256 |
tttgtggaaattagttcccagtttgtagttgttcatggcacaaaacagaacaattgcttaggcagacgaacccatttatgttttgctgaatgaaaggaaa |
44370157 |
T |
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| Q |
218 |
caaaagaagtagaaatgaaacctaagcgagggtaggagtgttatttagataaatttga |
275 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
44370156 |
caaaagaagtagaaatgaaacctaagcgagggtgagagtgttatttagataaatttga |
44370099 |
T |
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