View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19718_high_18 (Length: 302)
Name: NF19718_high_18
Description: NF19718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19718_high_18 |
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Alignment Details
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 24 - 264
Target Start/End: Original strand, 52512413 - 52512657
Alignment:
| Q |
24 |
ctatatgaatgcaattaattaagttaatgatgag----tgagtgagtaattgaaattgaattgaaactcgtatataaacatacatacataccttggagga |
119 |
Q |
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| T |
52512413 |
ctatatgaatgcaattaattaagttaatgatgagtgagtgagtgagtaattgaaattgaattgaaactcatatataaacatacatacataccttggagga |
52512512 |
T |
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| Q |
120 |
agaatgatatccttgattttgaggaagagtggatttaacaataaaacaacgcgtccttcctgtttgtttgatggaagttggaggaaggcatcgaggaata |
219 |
Q |
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| T |
52512513 |
agaatgatatccttgattttgaggaagagtggatttaacaataaaacaacgcgtccttcctgtttgtttgatggaagttggaggaaggcatcgaggaata |
52512612 |
T |
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| Q |
220 |
acagacgcctgcaaattgcaatccattgagatatgaagaatagag |
264 |
Q |
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| T |
52512613 |
acagacgcctgcaaattgcaatccattgagatatgaagaatagag |
52512657 |
T |
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