View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19718_high_21 (Length: 265)
Name: NF19718_high_21
Description: NF19718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19718_high_21 |
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Alignment Details
Target: chr3 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 10 - 248
Target Start/End: Original strand, 54339368 - 54339610
Alignment:
| Q |
10 |
attattcttaggctannnnnnnctgaccaattttatatgctgaggctttataatca----tattacatgcgagtagcgacacccacaaatatatgatatg |
105 |
Q |
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| T |
54339368 |
attattcttaggctatttttttctgaccaattttatatgctaaggctttataatcaatcatattacatgcgagtagcgacacccacaaatatatgatatg |
54339467 |
T |
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| Q |
106 |
attctagttgattcgtctggtgtaccaatttactggnnnnnnnggcagattgcctatatcaggggagttggagaggtacattcacataaaattccaaaat |
205 |
Q |
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| T |
54339468 |
attctagttgattcggctggtgtaccaatttactggaaaaaaaggcagattgcctatatcaggggagttggagaggtacattcacataaaattccaaaat |
54339567 |
T |
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| Q |
206 |
gcatatgaaagtgatcatcataatcataattcataattcataa |
248 |
Q |
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| T |
54339568 |
gcatatgaaagtgatcatcataatcataattcataattcataa |
54339610 |
T |
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