View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19718_high_22 (Length: 253)
Name: NF19718_high_22
Description: NF19718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19718_high_22 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 14 - 253
Target Start/End: Complemental strand, 27600568 - 27600326
Alignment:
| Q |
14 |
ttatactagaatggtagatagtcctattgagttgaatgtgaaatatgttcatttga---tgttcatctaccggatcccactttatatcacactttggttg |
110 |
Q |
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| T |
27600568 |
ttatactagaatggtagatagtcctattgagttgaatgtgaaatatgttcatttgacgatgttcacctaccagatcccactttagatcacactttggttg |
27600469 |
T |
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| Q |
111 |
aaatctcggtgtatctcacaattactagacttggaatggcttatagtgtttatgttttcatttaaattttcttttctactacgatatattaaatatttgt |
210 |
Q |
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| T |
27600468 |
aaatctcggtatatctcacaattactagacctggaatggcttatagtgtttatgttttcatttaatttttcttttctcctacgatatattaaatatttgt |
27600369 |
T |
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| Q |
211 |
tcttcgcatccttcactatcatcaaggcaattcaaaacgaaca |
253 |
Q |
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| T |
27600368 |
tcttcgcatccttcactatcattaaggcaattcaaaacgaaca |
27600326 |
T |
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