View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19718_high_28 (Length: 238)

Name: NF19718_high_28
Description: NF19718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19718_high_28
NF19718_high_28
[»] chr2 (31 HSPs)
chr2 (22-238)||(31572135-31572351)
chr2 (22-135)||(1000180-1000293)
chr2 (26-134)||(34008789-34008897)
chr2 (24-135)||(203932-204043)
chr2 (24-135)||(44665840-44665951)
chr2 (22-135)||(34008934-34009044)
chr2 (22-135)||(34009078-34009191)
chr2 (22-135)||(44665693-44665805)
chr2 (22-125)||(204175-204278)
chr2 (24-135)||(1000328-1000438)
chr2 (22-132)||(44665477-44665587)
chr2 (25-135)||(203783-203895)
chr2 (22-125)||(27314285-27314388)
chr2 (22-125)||(208316-208418)
chr2 (24-125)||(208159-208259)
chr2 (24-121)||(31571981-31572078)
chr2 (24-116)||(1000501-1000593)
chr2 (22-135)||(20708639-20708747)
chr2 (24-128)||(1000047-1000143)
chr2 (22-87)||(20708777-20708842)
chr2 (22-81)||(27314169-27314228)
chr2 (22-85)||(27314418-27314481)
chr2 (24-135)||(999888-999988)
chr2 (24-87)||(999788-999851)
chr2 (22-74)||(20708552-20708604)
chr2 (22-74)||(208856-208908)
chr2 (24-62)||(34009247-34009285)
chr2 (25-74)||(10424244-10424293)
chr2 (26-62)||(204082-204118)
chr2 (25-65)||(208478-208518)
chr2 (25-61)||(999678-999714)
[»] chr7 (37 HSPs)
chr7 (22-238)||(31097397-31097613)
chr7 (123-238)||(31097667-31097782)
chr7 (22-135)||(31096954-31097067)
chr7 (22-125)||(24774066-24774169)
chr7 (22-133)||(24774328-24774439)
chr7 (24-135)||(31097252-31097362)
chr7 (25-135)||(24774596-24774706)
chr7 (25-135)||(27904199-27904309)
chr7 (22-135)||(31096806-31096919)
chr7 (24-125)||(39031929-39032030)
chr7 (25-135)||(40962915-40963025)
chr7 (22-135)||(16377247-16377360)
chr7 (22-135)||(31097102-31097215)
chr7 (22-125)||(24774781-24774884)
chr7 (26-121)||(24774941-24775036)
chr7 (25-135)||(24775357-24775468)
chr7 (22-135)||(40964214-40964332)
chr7 (22-135)||(21759607-21759724)
chr7 (22-125)||(24775219-24775322)
chr7 (22-121)||(32660633-32660732)
chr7 (52-135)||(40964096-40964179)
chr7 (22-116)||(32656519-32656612)
chr7 (24-81)||(24773950-24774007)
chr7 (22-65)||(27904121-27904164)
chr7 (24-65)||(32660791-32660832)
chr7 (22-62)||(40963060-40963100)
chr7 (22-62)||(40963157-40963197)
chr7 (22-65)||(24774248-24774291)
chr7 (22-65)||(24774518-24774561)
chr7 (25-64)||(24775120-24775159)
chr7 (22-58)||(21759002-21759038)
chr7 (22-50)||(16377184-16377212)
chr7 (22-50)||(21754149-21754177)
chr7 (22-50)||(21754416-21754444)
chr7 (22-50)||(21758743-21758771)
chr7 (22-50)||(39031842-39031870)
chr7 (22-50)||(40966513-40966541)
[»] chr5 (45 HSPs)
chr5 (22-185)||(30089357-30089520)
chr5 (25-185)||(30088973-30089133)
chr5 (57-183)||(30096563-30096689)
chr5 (22-135)||(30096118-30096231)
chr5 (22-135)||(33374615-33374728)
chr5 (22-135)||(16498300-16498413)
chr5 (22-135)||(30089555-30089668)
chr5 (22-135)||(30089929-30090042)
chr5 (22-135)||(30094698-30094811)
chr5 (22-135)||(16498448-16498561)
chr5 (22-135)||(30089703-30089816)
chr5 (22-135)||(30094846-30094959)
chr5 (22-135)||(30095594-30095707)
chr5 (25-135)||(30095970-30096080)
chr5 (22-135)||(30095446-30095559)
chr5 (22-125)||(2417264-2417367)
chr5 (22-121)||(25100248-25100347)
chr5 (22-121)||(25159338-25159437)
chr5 (22-125)||(33827278-33827381)
chr5 (22-135)||(30095072-30095185)
chr5 (22-135)||(30095220-30095333)
chr5 (25-122)||(37608032-37608129)
chr5 (22-125)||(2416945-2417048)
chr5 (25-121)||(2417424-2417520)
chr5 (22-135)||(30095742-30095857)
chr5 (22-125)||(30094498-30094601)
chr5 (22-125)||(33374465-33374568)
chr5 (22-125)||(2417105-2417207)
chr5 (35-116)||(33827052-33827133)
chr5 (22-81)||(2416829-2416888)
chr5 (22-81)||(39878479-39878538)
chr5 (187-238)||(30096435-30096486)
chr5 (186-238)||(30088847-30088899)
chr5 (25-81)||(33827154-33827210)
chr5 (22-81)||(33826930-33826989)
chr5 (186-238)||(30089231-30089283)
chr5 (25-65)||(33374766-33374806)
chr5 (22-65)||(16498596-16498639)
chr5 (25-74)||(7957123-7957172)
chr5 (22-50)||(17913016-17913044)
chr5 (22-50)||(17913282-17913310)
chr5 (22-50)||(25099896-25099924)
chr5 (22-50)||(25100163-25100191)
chr5 (22-50)||(25158986-25159014)
chr5 (22-50)||(25159253-25159281)
[»] chr1 (20 HSPs)
chr1 (22-185)||(28947739-28947902)
chr1 (22-135)||(38542944-38543057)
chr1 (25-135)||(28947937-28948047)
chr1 (22-135)||(38543252-38543365)
chr1 (22-135)||(18848608-18848721)
chr1 (22-135)||(38542796-38542909)
chr1 (24-135)||(38542648-38542759)
chr1 (22-125)||(38543114-38543217)
chr1 (25-135)||(18848360-18848470)
chr1 (22-135)||(38542500-38542613)
chr1 (22-125)||(38543422-38543524)
chr1 (186-238)||(28947613-28947665)
chr1 (186-238)||(29388046-29388098)
chr1 (133-185)||(29388172-29388224)
chr1 (22-81)||(15198120-15198179)
chr1 (22-64)||(38542423-38542465)
chr1 (22-65)||(18848530-18848573)
chr1 (23-81)||(25872865-25872923)
chr1 (23-81)||(25874132-25874190)
chr1 (22-50)||(39727521-39727549)
[»] chr8 (23 HSPs)
chr8 (22-185)||(405639-405802)
chr8 (25-185)||(44831972-44832131)
chr8 (30-185)||(17695221-17695377)
chr8 (22-135)||(27018459-27018572)
chr8 (22-135)||(25876020-25876133)
chr8 (23-135)||(25876168-25876280)
chr8 (25-135)||(18485821-18485931)
chr8 (25-135)||(17694914-17695024)
chr8 (22-125)||(410235-410338)
chr8 (22-121)||(18482509-18482608)
chr8 (22-135)||(9061269-9061382)
chr8 (22-119)||(17695059-17695156)
chr8 (22-125)||(24011348-24011451)
chr8 (22-86)||(9061174-9061238)
chr8 (22-86)||(24011482-24011546)
chr8 (22-81)||(9061417-9061476)
chr8 (22-77)||(18482397-18482452)
chr8 (186-238)||(405513-405565)
chr8 (186-238)||(44831846-44831898)
chr8 (187-238)||(17695452-17695503)
chr8 (22-66)||(18485664-18485708)
chr8 (25-65)||(24014287-24014327)
chr8 (22-65)||(25875942-25875985)
[»] chr3 (36 HSPs)
chr3 (22-185)||(37099325-37099488)
chr3 (22-185)||(37098942-37099105)
chr3 (22-135)||(36078098-36078211)
chr3 (22-135)||(36077649-36077762)
chr3 (22-135)||(39145839-39145952)
chr3 (22-135)||(36077502-36077614)
chr3 (22-135)||(36077950-36078063)
chr3 (22-135)||(36078246-36078359)
chr3 (22-135)||(7606004-7606117)
chr3 (22-127)||(7605543-7605648)
chr3 (22-125)||(7605705-7605808)
chr3 (22-125)||(16652008-16652111)
chr3 (22-125)||(37434654-37434757)
chr3 (22-135)||(36077797-36077915)
chr3 (22-135)||(39145620-39145728)
chr3 (25-125)||(16652171-16652271)
chr3 (23-125)||(7605865-7605967)
chr3 (22-125)||(16651848-16651951)
chr3 (22-125)||(37434014-37434117)
chr3 (22-125)||(37435041-37435144)
chr3 (24-135)||(36220453-36220560)
chr3 (35-125)||(7605363-7605453)
chr3 (25-121)||(37434501-37434597)
chr3 (22-121)||(37434885-37434984)
chr3 (25-121)||(37434248-37434344)
chr3 (58-135)||(36078394-36078476)
chr3 (25-81)||(16652331-16652387)
chr3 (186-238)||(37099179-37099230)
chr3 (186-238)||(37099562-37099614)
chr3 (26-81)||(7605247-7605302)
chr3 (22-65)||(7606235-7606278)
chr3 (22-64)||(36077425-36077467)
chr3 (22-62)||(37434401-37434441)
chr3 (22-65)||(7605457-7605500)
chr3 (24-57)||(39145765-39145798)
chr3 (22-58)||(39145987-39146023)
[»] scaffold0051 (2 HSPs)
scaffold0051 (24-185)||(10509-10669)
scaffold0051 (186-238)||(10383-10435)
[»] chr4 (30 HSPs)
chr4 (22-183)||(19744838-19744999)
chr4 (22-183)||(19794807-19794968)
chr4 (25-182)||(23976993-23977142)
chr4 (24-135)||(41384012-41384123)
chr4 (25-135)||(19744693-19744803)
chr4 (25-135)||(19795003-19795113)
chr4 (22-135)||(19744092-19744205)
chr4 (22-135)||(19744464-19744577)
chr4 (22-135)||(19795229-19795342)
chr4 (22-135)||(19795601-19795714)
chr4 (22-135)||(19744316-19744429)
chr4 (22-135)||(19795377-19795490)
chr4 (25-135)||(37591644-37591754)
chr4 (22-135)||(19743945-19744057)
chr4 (33-135)||(13138073-13138175)
chr4 (34-135)||(19795749-19795850)
chr4 (22-135)||(19796031-19796143)
chr4 (22-121)||(41383854-41383953)
chr4 (22-135)||(41384158-41384268)
chr4 (22-121)||(41383699-41383797)
chr4 (186-238)||(19745076-19745128)
chr4 (186-238)||(19794678-19794730)
chr4 (186-238)||(23976865-23976917)
chr4 (22-65)||(37591932-37591975)
chr4 (22-65)||(37592046-37592089)
chr4 (22-65)||(37592160-37592203)
chr4 (22-65)||(41384303-41384346)
chr4 (22-65)||(13138288-13138331)
chr4 (22-63)||(37592276-37592317)
chr4 (22-50)||(44376738-44376766)
[»] chr6 (23 HSPs)
chr6 (22-159)||(33289231-33289368)
chr6 (22-135)||(918826-918939)
chr6 (22-135)||(2004447-2004558)
chr6 (25-125)||(8658285-8658385)
chr6 (17-135)||(918674-918791)
chr6 (22-125)||(920484-920587)
chr6 (24-135)||(8658740-8658850)
chr6 (22-121)||(33289425-33289524)
chr6 (22-135)||(8658423-8658534)
chr6 (22-125)||(918974-919076)
chr6 (53-135)||(24570898-24570980)
chr6 (24-135)||(33034626-33034742)
chr6 (24-135)||(33034779-33034895)
chr6 (22-88)||(2004593-2004659)
chr6 (22-74)||(24570811-24570863)
chr6 (24-81)||(920646-920703)
chr6 (132-185)||(8657349-8657402)
chr6 (22-75)||(8658038-8658091)
chr6 (186-238)||(8657223-8657275)
chr6 (22-65)||(8658591-8658634)
chr6 (24-65)||(919135-919176)
chr6 (22-65)||(33034930-33034973)
chr6 (22-65)||(8658185-8658228)
[»] scaffold0173 (2 HSPs)
scaffold0173 (22-135)||(23255-23368)
scaffold0173 (22-50)||(23403-23431)
[»] scaffold0097 (1 HSPs)
scaffold0097 (22-74)||(12626-12678)
[»] scaffold0896 (2 HSPs)
scaffold0896 (132-185)||(808-861)
scaffold0896 (186-238)||(935-987)


Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 22 - 238
Target Start/End: Original strand, 31572135 - 31572351
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31572135 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 31572234  T
Q  122 atattaaagttaactaaacatattttgaatcaattatagaaatttctttcaacataatttttgtcttttggcaaaatctcttctgttattaaattataga 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31572235 atattaaagttaactaaacatattttgaatcaattatagaaatttctttcaacataatttttgtcttttggcaaaatctcttctgttattaaattataga 31572334  T
Q  222 ttgctgctcaatgtcac 238  Q
    |||||||||||||||||    
T  31572335 ttgctgctcaatgtcac 31572351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 1000293 - 1000180
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  1000293 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttacccttattgaattttcccccttctcaatttctcgatacatcttcttat 1000194  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  1000193 atattaaagttaac 1000180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 26 - 134
Target Start/End: Complemental strand, 34008897 - 34008789
Alignment:
Q  26 attgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatatat 125  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34008897 attgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttatatat 34008798  T
Q  126 taaagttaa 134  Q
    |||||||||    
T  34008797 taaagttaa 34008789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 203932 - 204043
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatat 123  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  203932 ctattgcataaatttactattttaactctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttatat 204031  T
Q  124 attaaagttaac 135  Q
    ||||||||||||    
T  204032 attaaagttaac 204043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 44665951 - 44665840
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatat 123  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  44665951 ctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttttcgatacatcttcttatat 44665852  T
Q  124 attaaagttaac 135  Q
    ||||||||||||    
T  44665851 attaaagttaac 44665840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 34009044 - 34008934
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||    
T  34009044 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgataca---tcttat 34008948  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  34008947 atattaaagttaac 34008934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 34009191 - 34009078
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||    
T  34009191 acctattgaataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaatttgcccctttctcaatttctcgatacatcttcttat 34009092  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  34009091 atattaaagttaac 34009078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 44665805 - 44665693
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  44665805 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaa-tttcccccttctcaatttttcgatacatcttcttat 44665707  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  44665706 atattaaagttaac 44665693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 204175 - 204278
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  204175 acctattgcataaatttactatttgaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 204274  T
Q  122 atat 125  Q
    ||||    
T  204275 atat 204278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 1000438 - 1000328
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatat 123  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||    
T  1000438 ctattgcataaatttactattttaaccctgatgctaaattcctttgtttaactttattgaa-ttttccccttctcaatttcttgatacatcttcttatat 1000340  T
Q  124 attaaagttaac 135  Q
    ||||||||||||    
T  1000339 attaaagttaac 1000328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 44665587 - 44665477
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||    
T  44665587 acctattgcataaatttactattttagccttgatgctaaattcctttgtttaaccttattgaattttctcctttctcaatttctcgatacatcttcttat 44665488  T
Q  122 atattaaagtt 132  Q
    |||||||||||    
T  44665487 atattaaagtt 44665477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 135
Target Start/End: Original strand, 203783 - 203895
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatct--tcttata 122  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  203783 tattgcataaatttactattttaaccctgatgttaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttatcttata 203882  T
Q  123 tattaaagttaac 135  Q
    |||||||||||||    
T  203883 tattaaagttaac 203895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 27314388 - 27314285
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  27314388 acctattgcataaatttactattttaaccctgatgctaaattcctttatttaaccttattgaattttcccccttctcaatttcccgatacatcttcttat 27314289  T
Q  122 atat 125  Q
    ||||    
T  27314288 atat 27314285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 208316 - 208418
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||    
T  208316 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaa-ttttccccttctcaatttctcgataaatcttcatat 208414  T
Q  122 atat 125  Q
    ||||    
T  208415 atat 208418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 208159 - 208259
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatat 123  Q
    |||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  208159 ctattgcataaatt-actattttaatcctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttatat 208257  T
Q  124 at 125  Q
    ||    
T  208258 at 208259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 31571981 - 31572078
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||||||||||||||||||||||   |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31571981 ctattgcataaatttactattttaattctgatcctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 31572078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 1000593 - 1000501
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatctt 116  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1000593 ctattgcataaatttactattttaaccatgatactaaattcatttgtttaaccttattgaattttcccccttctcaatttctcgatacatctt 1000501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 20708747 - 20708639
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |     |  |||||||||||||||||||||||    
T  20708747 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcc-----cagaatttctcgatacatcttcttat 20708653  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  20708652 atattaaagttaac 20708639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 1000143 - 1000047
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatat 123  Q
    |||||||||||||||||||||||||||  |||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1000143 ctattgcataaatttactattttaacccagatgctaaattcc--------accttattgaatttttccccttctcaatttctcgatacatcttcttatat 1000052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 20708842 - 20708777
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaattt 87  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20708842 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattt 20708777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 27314228 - 27314169
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttatt 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27314228 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttatt 27314169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 27314481 - 27314418
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaat 85  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27314481 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaat 27314418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 999988 - 999888
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatat 123  Q
    ||||||||||||||||||||||||||| ||||||||||||||        |||||||||||||||||||||| ||||||| ||||||||   ||||||||    
T  999988 ctattgcataaatttactattttaaccctgatgctaaattcc--------accttattgaatttttccccttttcaatttttcgataca---tcttatat 999900  T
Q  124 attaaagttaac 135  Q
    ||||||||||||    
T  999899 attaaagttaac 999888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 999851 - 999788
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaattt 87  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  999851 ctattgcataaatttactattttaaccctgatgctaaatttctttgtttaaccttattgaattt 999788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 20708604 - 20708552
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaa 74  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20708604 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaa 20708552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 208856 - 208908
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaa 74  Q
    ||||||| ||||||||||||||||||||  ||||| |||||||||||||||||    
T  208856 acctattacataaatttactattttaacgctgatgttaaattcctttgtttaa 208908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 34009285 - 34009247
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaat 62  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  34009285 ctattgcataaatttactattttaaccctgatgctaaat 34009247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 10424293 - 10424244
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaa 74  Q
    ||||||||||||||||| |||||||| | ||||| |||||||||||||||    
T  10424293 tattgcataaatttactgttttaaccctaatgcttaattcctttgtttaa 10424244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 204082 - 204118
Alignment:
Q  26 attgcataaatttactattttaaccatgatgctaaat 62  Q
    ||||||||||||||||||||||||| |||||||||||    
T  204082 attgcataaatttactattttaaccctgatgctaaat 204118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 208478 - 208518
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    |||||||||||||||||||||||||  ||||||||||||||    
T  208478 tattgcataaatttactattttaacgctgatgctaaattcc 208518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 999714 - 999678
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaa 61  Q
    |||||||||||||||||||||||||| ||||||||||    
T  999714 tattgcataaatttactattttaaccctgatgctaaa 999678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 22 - 238
Target Start/End: Original strand, 31097397 - 31097613
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  31097397 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatctttttat 31097496  T
Q  122 atattaaagttaactaaacatattttgaatcaattatagaaatttctttcaacataatttttgtcttttggcaaaatctcttctgttattaaattataga 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31097497 atattaaagttaactaaacatattttgaatcaattatagaaatttctttcaacctaatttttgtcttttggcaaaatctcttctgttattaaattataga 31097596  T
Q  222 ttgctgctcaatgtcac 238  Q
    |||||||||||||||||    
T  31097597 ttgctgctcaatgtcac 31097613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 123 - 238
Target Start/End: Original strand, 31097667 - 31097782
Alignment:
Q  123 tattaaagttaactaaacatattttgaatcaattatagaaatttctttcaacataatttttgtcttttggcaaaatctcttctgttattaaattatagat 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31097667 tattaaagttaactaaacatattttgaatcaattatagaaatttctttcaacctaatttttgtcttttggcaaaatctcttctgttattaaattatagat 31097766  T
Q  223 tgctgctcaatgtcac 238  Q
    ||||||||||||||||    
T  31097767 tgctgctcaatgtcac 31097782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 31096954 - 31097067
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  31096954 acctatggcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttttcgatacatcttcttat 31097053  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  31097054 atattaaagttaac 31097067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 24774169 - 24774066
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24774169 acctattgcataaatttactattttaaccatgatgctaaattcctttgtgtaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 24774070  T
Q  122 atat 125  Q
    ||||    
T  24774069 atat 24774066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 24774439 - 24774328
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  24774439 acctattgtataaatttactattttaaccctgatgctaaattcctttgtttaaccttatggaattttcccccttctcaatttctcgatacatcttcttat 24774340  T
Q  122 atattaaagtta 133  Q
    ||||||||||||    
T  24774339 atattaaagtta 24774328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 31097252 - 31097362
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatat 123  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  31097252 ctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaa-tttcccccttctcaatttctcgatacatcttcttatat 31097350  T
Q  124 attaaagttaac 135  Q
    ||||||||||||    
T  31097351 attaaagttaac 31097362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 135
Target Start/End: Complemental strand, 24774706 - 24774596
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatata 124  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  24774706 tattgcataaatttactattttaaccctgatgctaaattcatttgtttaaccttattgaattttccccctactcaatttctcgatacatcttcttatata 24774607  T
Q  125 ttaaagttaac 135  Q
    |||||||||||    
T  24774606 ttaaagttaac 24774596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 135
Target Start/End: Complemental strand, 27904309 - 27904199
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatata 124  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||    
T  27904309 tattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttcttaatacatcttcttatata 27904210  T
Q  125 ttaaagttaac 135  Q
    |||||||||||    
T  27904209 ttaaagttaac 27904199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 31096806 - 31096919
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  31096806 acctatggcataaatttactattttaaccctgatgctaaattcatttgtttaaccttattgaattttgccccttctcaatttctcgagacatcttcttat 31096905  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  31096906 atattaaagttaac 31096919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 39032030 - 39031929
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  39032030 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttattatat 39031931  T
Q  124 at 125  Q
    ||    
T  39031930 at 39031929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 25 - 135
Target Start/End: Original strand, 40962915 - 40963025
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatata 124  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  40962915 tattgcataaatttactattttaactctgatgctaaattcgtttgtttaaccttattgaattttcccccttctcaatatctcgatacatcttcttatata 40963014  T
Q  125 ttaaagttaac 135  Q
    |||||||||||    
T  40963015 ttaaagttaac 40963025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 16377360 - 16377247
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | |  |||||||||||||||||||||||||||    
T  16377360 acctattgcataaatttactattttaaccctgatgctaaattcttttgtttaaccttattgaattttccgcaatctcaatttctcgatacatcttcttat 16377261  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  16377260 atattaaagttaac 16377247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 31097102 - 31097215
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||| |||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  31097102 acctatggcataaatttactattttaaccctgatgctaaattattttgtttaaccttattgaattttcccccttctcaatttcacgatacatcttcttat 31097201  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  31097202 atattaaagttaac 31097215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 24774884 - 24774781
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  24774884 acctattgcataaatttaatattttaaccctgatgctaaattcctttgtttaaccttattgaattttccccctactcaatttctcgatacatcttcttat 24774785  T
Q  122 atat 125  Q
    ||||    
T  24774784 atat 24774781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 24775036 - 24774941
Alignment:
Q  26 attgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24775036 attgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 24774941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 25 - 135
Target Start/End: Complemental strand, 24775468 - 24775357
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaa-ccttattgaatttttccccttctcaatttctcgatacatcttcttatat 123  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  24775468 tattgcataaatttactattttaaccctgatgctaaattcctttgtttaaaccttattgaattttctcccttctcaatttatcgatacatcttcttatat 24775369  T
Q  124 attaaagttaac 135  Q
    ||||||||||||    
T  24775368 attaaagttaac 24775357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 40964214 - 40964332
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgataca-----tctt 116  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||     ||||    
T  40964214 acctattgcataaatttactattttaaccctgatgctaaatttctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttctctt 40964313  T
Q  117 cttatatattaaagttaac 135  Q
    |||||||||||||||||||    
T  40964314 cttatatattaaagttaac 40964332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 21759724 - 21759607
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttc---- 117  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||        
T  21759724 acctattgcataaatttactattttaaccctgatgctaaaatcctttgtttaatcttattgaattttcccccttctcaatttctcgatacatcttcttat 21759625  T
Q  118 ttatatattaaagttaac 135  Q
    ||||||||||||||||||    
T  21759624 ttatatattaaagttaac 21759607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 24775322 - 24775219
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  24775322 acctattgcataaatttactattttaatccggatgctaaattcctttgtttaaccttattgaattttccccctactcaatttctcgatacatcttcttat 24775223  T
Q  122 atat 125  Q
    ||||    
T  24775222 atat 24775219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 32660633 - 32660732
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  32660633 acctattgcataaatttgctattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccacttctcaatttctcgatacatcttcttat 32660732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 40964096 - 40964179
Alignment:
Q  52 tgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatatattaaagttaac 135  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  40964096 tgatgctaaattcctttgtttaaccttattgaattttccctcttctcaatttctcgatacatcttcttatatattaaagttaac 40964179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 32656519 - 32656612
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatctt 116  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  32656519 acctattgcataaattttctattttaaccctgatgctaaattcctttgtttaaccttattgaa-tttcccccttctcaatttctcgatacatctt 32656612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 24774007 - 24773950
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttatt 81  Q
    |||||||||||||||||||||| |||| |||| || ||||||||||||||||||||||    
T  24774007 ctattgcataaatttactatttgaaccctgatactgaattcctttgtttaaccttatt 24773950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 27904164 - 27904121
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  27904164 acctattgcataaatttactattttaaccctgatgctaaattcc 27904121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 32660791 - 32660832
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  32660791 ctattgcataaatttactattttaaccctgatgctaaattcc 32660832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 40963060 - 40963100
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaat 62  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  40963060 acctattgcataaatttactattttaaccctgatgctaaat 40963100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 40963157 - 40963197
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaat 62  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  40963157 acctattgcataaatttactattttaaccctgatgctaaat 40963197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 24774291 - 24774248
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    ||||||||||||||||||||||||||||| | ||||||||||||    
T  24774291 acctattgcataaatttactattttaaccctaatgctaaattcc 24774248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 24774561 - 24774518
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||    
T  24774561 acctattgcataaatttactattttaaccctgatgttaaattcc 24774518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 24775159 - 24775120
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattc 64  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  24775159 tattgcataaatttactattttaaccctgatgctaaattc 24775120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 21759038 - 21759002
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgct 58  Q
    ||||||||||||||||||||||||||||||| |||||    
T  21759038 acctattgcataaatttactattttaaccataatgct 21759002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 50
Target Start/End: Complemental strand, 16377212 - 16377184
Alignment:
Q  22 acctattgcataaatttactattttaacc 50  Q
    |||||||||||||||||||||||||||||    
T  16377212 acctattgcataaatttactattttaacc 16377184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 50
Target Start/End: Complemental strand, 21754177 - 21754149
Alignment:
Q  22 acctattgcataaatttactattttaacc 50  Q
    |||||||||||||||||||||||||||||    
T  21754177 acctattgcataaatttactattttaacc 21754149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 50
Target Start/End: Complemental strand, 21754444 - 21754416
Alignment:
Q  22 acctattgcataaatttactattttaacc 50  Q
    |||||||||||||||||||||||||||||    
T  21754444 acctattgcataaatttactattttaacc 21754416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 50
Target Start/End: Complemental strand, 21758771 - 21758743
Alignment:
Q  22 acctattgcataaatttactattttaacc 50  Q
    |||||||||||||||||||||||||||||    
T  21758771 acctattgcataaatttactattttaacc 21758743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 50
Target Start/End: Complemental strand, 39031870 - 39031842
Alignment:
Q  22 acctattgcataaatttactattttaacc 50  Q
    |||||||||||||||||||||||||||||    
T  39031870 acctattgcataaatttactattttaacc 39031842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 50
Target Start/End: Original strand, 40966513 - 40966541
Alignment:
Q  22 acctattgcataaatttactattttaacc 50  Q
    |||||||||||||||||||||||||||||    
T  40966513 acctattgcataaatttactattttaacc 40966541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 22 - 185
Target Start/End: Complemental strand, 30089520 - 30089357
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  30089520 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatagatcttcttat 30089421  T
Q  122 atattaaagttaactaaacatattttgaatcaattatagaaatttctttcaacataatttttgt 185  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30089420 atattaaagttaactaaacatattttgaatcaattatacaaatttctttcaacataatttttgt 30089357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 30089133 - 30088973
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatata 124  Q
    ||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  30089133 tattgtataaatttactattttaaccctgattctaaattcctttgtttaaccttattgaattttcccccttctcaacttctcgatacatcttcttatata 30089034  T
Q  125 ttaaagttaactaaacatattttgaatcaattatagaaatttctttcaacataatttttgt 185  Q
    ||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||    
T  30089033 ttaaagttaactaaacatattttgaatgaattatacaaattcctttcaacataatttttgt 30088973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 30096689 - 30096563
Alignment:
Q  57 ctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatatattaaagttaactaaacatattttgaatcaatt 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30096689 ctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatatattaaagttaactaaacatattttgaatcaatt 30096590  T
Q  157 atagaaatttctttcaacataattttt 183  Q
    ||| ||||| |||||||||||||||||    
T  30096589 atacaaattgctttcaacataattttt 30096563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 30096231 - 30096118
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30096231 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 30096132  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  30096131 atattaaagttaac 30096118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 33374615 - 33374728
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33374615 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 33374714  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  33374715 atattaaagttaac 33374728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 16498300 - 16498413
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16498300 acctattgcataaatttactattttaaccctgatgctaaattcctatgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 16498399  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  16498400 atattaaagttaac 16498413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 30089668 - 30089555
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  30089668 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcctccttctcaatttctcgatacatcttcttat 30089569  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  30089568 atattaaagttaac 30089555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 30090042 - 30089929
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  30090042 acctattgcataaatttactattttaaccttgatgctaaattcctttgtttaaccttattgaattttcctccttctcaatttctcgatacatcttcttat 30089943  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  30089942 atattaaagttaac 30089929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 30094811 - 30094698
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30094811 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaatttttccctttctcaatttctcgatacatcttcttat 30094712  T
Q  122 atattaaagttaac 135  Q
    ||| ||||||||||    
T  30094711 ataataaagttaac 30094698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 16498448 - 16498561
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  16498448 acctattgcataaatttactattttaactctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatatatcttcttat 16498547  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  16498548 atattaaagttaac 16498561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 30089816 - 30089703
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||    
T  30089816 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcctccttctcaatttctcgatacatcttgttat 30089717  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  30089716 atattaaagttaac 30089703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 30094959 - 30094846
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||    
T  30094959 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttccttcttctcaatttctcgatacatcttcttat 30094860  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  30094859 atattaaagttaac 30094846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 30095707 - 30095594
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||    
T  30095707 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcctccttctcaatttctcgatacatcttgttat 30095608  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  30095607 atattaaagttaac 30095594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 135
Target Start/End: Complemental strand, 30096080 - 30095970
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatata 124  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||    
T  30096080 tattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcctccttctcaatttctcaatacatcttcttatata 30095981  T
Q  125 ttaaagttaac 135  Q
    |||||||||||    
T  30095980 ttaaagttaac 30095970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 30095559 - 30095446
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  30095559 accttttgcataaatttactattttaaccctgatgctaaattcatttgtttaaccttattgaattttcctccttctcaatttctcgatacatcttcttat 30095460  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  30095459 atattaaagttaac 30095446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 2417367 - 2417264
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  2417367 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttcccgatacatcttcttat 2417268  T
Q  122 atat 125  Q
    ||||    
T  2417267 atat 2417264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 25100347 - 25100248
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25100347 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 25100248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 25159437 - 25159338
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25159437 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 25159338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 33827381 - 33827278
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33827381 acctattgcataaatttactattttaaccctgatgctaaattcttttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 33827282  T
Q  122 atat 125  Q
    ||||    
T  33827281 atat 33827278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 30095185 - 30095072
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||    
T  30095185 acctatagcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttccttcttctcaatttctcgaaacatcttcttat 30095086  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  30095085 atattaaagttaac 30095072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 30095333 - 30095220
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| | |||||||||||||||||||| |||||||||    
T  30095333 acctattgcataaatttactattttaaccctaatgctaaattccttggtttaaccttattgaattttcctccttctcaatttctcgatacgtcttcttat 30095234  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  30095233 atattaaagttaac 30095220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 37608032 - 37608129
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttata 122  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37608032 tattgcataaatttactattttaaccctgatgctaaattcatttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttata 37608129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 2417048 - 2416945
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||  ||||||||||||||||    
T  2417048 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaagcttattgaattttcccccttctcaattttccgatacatcttcttat 2416949  T
Q  122 atat 125  Q
    ||||    
T  2416948 atat 2416945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 2417520 - 2417424
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2417520 tattgcataaatttactattttaaccctgatgctaaattcttttgtttaaccttattgaatttttccccttctcaatttcccgatacatcttcttat 2417424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 30095857 - 30095742
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||| |||||||||    
T  30095857 acctattgcataaatttactattttaaccctgatgctaaattccttggtttaaccttattgaattttcctccttctcaatttctcgatacgtcttcttat 30095758  T
Q  122 --atattaaagttaac 135  Q
      ||||||||||||||    
T  30095757 atatattaaagttaac 30095742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 30094601 - 30094498
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||| ||||    
T  30094601 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattaaattttcctccttctcaatttctcgatacatcttgttat 30094502  T
Q  122 atat 125  Q
    ||||    
T  30094501 atat 30094498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 33374465 - 33374568
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  33374465 acctattgcataaatttactattttaaccctgatgttaaattcatttgtttaaccttattgaatttccccccttctcaatttctcgatacatcttcttat 33374564  T
Q  122 atat 125  Q
    ||||    
T  33374565 atat 33374568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 2417207 - 2417105
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||    
T  2417207 acctattgcataattttactattttaaccctgatgctaaattcctttgtttaaccttattgaa-tttcccccttctcaatttcccaatacatcttcttat 2417109  T
Q  122 atat 125  Q
    ||||    
T  2417108 atat 2417105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 33827133 - 33827052
Alignment:
Q  35 atttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatctt 116  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33827133 atttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatctt 33827052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 2416888 - 2416829
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttatt 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2416888 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttatt 2416829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 39878479 - 39878538
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttatt 81  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  39878479 acctattgcataaatttactattttaaccctgatgctgaattcctttgtttaaccttatt 39878538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 30096486 - 30096435
Alignment:
Q  187 ttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 238  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30096486 ttttggcaaaatctcttatgttattaaattatagattgctgctcaatgtcac 30096435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 30088899 - 30088847
Alignment:
Q  186 cttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 238  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  30088899 cttttggcaaaacctcttcttttattaaattatagattgctgctcaatgtcac 30088847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 33827210 - 33827154
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttatt 81  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  33827210 tattgcataaatttactatttgaaccctgatgctgaattcctttgtttaaccttatt 33827154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 33826989 - 33826930
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttatt 81  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||| |||||||    
T  33826989 acctattgcataaatttactatttgaaccctgatgctgaattcctttgtttatccttatt 33826930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 30089283 - 30089231
Alignment:
Q  186 cttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 238  Q
    ||||||||||| ||| |||||||||||||||||||||||||| ||||||||||    
T  30089283 cttttggcaaattcttttctgttattaaattatagattgctgttcaatgtcac 30089231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 33374766 - 33374806
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  33374766 tattgcataaatttactattttaaccctgatgctaaattcc 33374806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 16498596 - 16498639
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||    
T  16498596 acctattgcataaatttactattttaaccctgatgttaaattcc 16498639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 7957123 - 7957172
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaa 74  Q
    ||||||||||||||||| |||||||| | ||||| |||||||||||||||    
T  7957123 tattgcataaatttactgttttaaccctaatgcttaattcctttgtttaa 7957172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 50
Target Start/End: Original strand, 17913016 - 17913044
Alignment:
Q  22 acctattgcataaatttactattttaacc 50  Q
    |||||||||||||||||||||||||||||    
T  17913016 acctattgcataaatttactattttaacc 17913044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 50
Target Start/End: Original strand, 17913282 - 17913310
Alignment:
Q  22 acctattgcataaatttactattttaacc 50  Q
    |||||||||||||||||||||||||||||    
T  17913282 acctattgcataaatttactattttaacc 17913310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 50
Target Start/End: Complemental strand, 25099924 - 25099896
Alignment:
Q  22 acctattgcataaatttactattttaacc 50  Q
    |||||||||||||||||||||||||||||    
T  25099924 acctattgcataaatttactattttaacc 25099896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 50
Target Start/End: Complemental strand, 25100191 - 25100163
Alignment:
Q  22 acctattgcataaatttactattttaacc 50  Q
    |||||||||||||||||||||||||||||    
T  25100191 acctattgcataaatttactattttaacc 25100163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 50
Target Start/End: Complemental strand, 25159014 - 25158986
Alignment:
Q  22 acctattgcataaatttactattttaacc 50  Q
    |||||||||||||||||||||||||||||    
T  25159014 acctattgcataaatttactattttaacc 25158986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 50
Target Start/End: Complemental strand, 25159281 - 25159253
Alignment:
Q  22 acctattgcataaatttactattttaacc 50  Q
    |||||||||||||||||||||||||||||    
T  25159281 acctattgcataaatttactattttaacc 25159253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 152; Significance: 1e-80; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 22 - 185
Target Start/End: Complemental strand, 28947902 - 28947739
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28947902 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 28947803  T
Q  122 atattaaagttaactaaacatattttgaatcaattatagaaatttctttcaacataatttttgt 185  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28947802 atattaaagttaactaaacatattttgaatcaattatacaaatttctttcaacataatttttgt 28947739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 38543057 - 38542944
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38543057 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttcccgatacatcttcttat 38542958  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  38542957 atattaaagttaac 38542944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 25 - 135
Target Start/End: Complemental strand, 28948047 - 28947937
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatata 124  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  28948047 tattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttcttgatacatcttcttatata 28947948  T
Q  125 ttaaagttaac 135  Q
    |||||||||||    
T  28947947 ttaaagttaac 28947937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 38543365 - 38543252
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||    
T  38543365 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttccccctgctcaatttcttgatacatcttcttat 38543266  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  38543265 atattaaagttaac 38543252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 18848721 - 18848608
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   || ||||||||||||||||||||||||||||    
T  18848721 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaatttcctccattctcaatttctcgatacatcttcttat 18848622  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  18848621 atattaaagttaac 18848608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 38542909 - 38542796
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  38542909 acctattgcataaatttactattttaaccctgatgctaaattccgttgtttaaccttattgaattttcccccttctcaattttccgatacatcttcttat 38542810  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  38542809 atattaaagttaac 38542796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 38542759 - 38542648
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatat 123  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||    
T  38542759 ctattgcataaatttattattttaaccctgatgctaaattcctttgtttaagcttattgaattttctcccttctcaatttctcgatacatcttcttatat 38542660  T
Q  124 attaaagttaac 135  Q
    ||||||||||||    
T  38542659 attaaagttaac 38542648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 38543217 - 38543114
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  38543217 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttttcccttctcaatttcccgatacatcttcttat 38543118  T
Q  122 atat 125  Q
    ||||    
T  38543117 atat 38543114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 25 - 135
Target Start/End: Original strand, 18848360 - 18848470
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatata 124  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  18848360 tattgcataaatttaatattttaaccctgatgctaaattcttttgtttaaccttattgaattttcccccttctcaatttatcgatacatcttcttatata 18848459  T
Q  125 ttaaagttaac 135  Q
    |||||||||||    
T  18848460 ttaaagttaac 18848470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 38542613 - 38542500
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  38542613 acctattgcataaatttactatgttaatcctgatgctaaattcctttgtttaaccttattgaattttctcccttctcaatttcttgatacatcttcttat 38542514  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  38542513 atattaaagttaac 38542500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 38543524 - 38543422
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||    
T  38543524 acctattgcataaatttactattttaaccctgatgttaaattcctttgtttaaccttattg-attttttcccttctcaatttcccgatacatcttcttat 38543426  T
Q  122 atat 125  Q
    ||||    
T  38543425 atat 38543422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 28947665 - 28947613
Alignment:
Q  186 cttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 238  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28947665 cttttggcaaaatctcttttgttattaaattatagattgctgctcaatgtcac 28947613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 29388098 - 29388046
Alignment:
Q  186 cttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 238  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29388098 cttttggcaaaatctcttatgttattaaattatagattgctgctcaatgtcac 29388046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 29388224 - 29388172
Alignment:
Q  133 aactaaacatattttgaatcaattatagaaatttctttcaacataatttttgt 185  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29388224 aactaaacatattttgaatcaattatacaaatttctttcaacataatttttgt 29388172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 15198179 - 15198120
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttatt 81  Q
    |||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  15198179 acctattgtataaatttactatttgaaccctgatgctgaattcctttgtttaaccttatt 15198120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 38542465 - 38542423
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattc 64  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  38542465 acctattgcataaatttactattttaaccctgatgctaaattc 38542423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 18848573 - 18848530
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||    
T  18848573 acctattgcataaatttactattttaaccctgatgttaaattcc 18848530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 25872865 - 25872923
Alignment:
Q  23 cctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttatt 81  Q
    ||||||||||||||||||| | |||||| | ||||| ||||||||||||||||| ||||    
T  25872865 cctattgcataaatttactgtattaaccctaatgcttaattcctttgtttaaccctatt 25872923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 25874132 - 25874190
Alignment:
Q  23 cctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttatt 81  Q
    ||||||||||||||||||| | |||||| | ||||| ||||||||||||||||| ||||    
T  25874132 cctattgcataaatttactgtattaaccctaatgcttaattcctttgtttaaccctatt 25874190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 50
Target Start/End: Original strand, 39727521 - 39727549
Alignment:
Q  22 acctattgcataaatttactattttaacc 50  Q
    |||||||||||||||||||||||||||||    
T  39727521 acctattgcataaatttactattttaacc 39727549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 148; Significance: 3e-78; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 22 - 185
Target Start/End: Complemental strand, 405802 - 405639
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  405802 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 405703  T
Q  122 atattaaagttaactaaacatattttgaatcaattatagaaatttctttcaacataatttttgt 185  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  405702 atattaaagctaactaaacatattttgaatcaattatacaaatttctttcaacataatttttgt 405639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 44832131 - 44831972
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatata 124  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  44832131 tattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaatttt-ccccttctcaatttctcgataaatcttcttatata 44832033  T
Q  125 ttaaagttaactaaacatattttgaatcaattatagaaatttctttcaacataatttttgt 185  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  44832032 ttaaagttaactaaacatattttgaatcaattatacaaatttctttcaacataatttttgt 44831972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 30 - 185
Target Start/End: Original strand, 17695221 - 17695377
Alignment:
Q  30 cataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatatattaaa 129  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17695221 cataaatttactattttaaccctgatgctaaattcatttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttatatattaaa 17695320  T
Q  130 gttaactaaacatattttgaatcaattatagaaatttctttc-aacataatttttgt 185  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  17695321 gttaactaaacatattttgaatcaattatacaaatttctttcaaacataatttttgt 17695377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 27018459 - 27018572
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27018459 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 27018558  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  27018559 atattaaagttaac 27018572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 25876133 - 25876020
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25876133 acctattgcataaatttactattttaaccctgatgctaaattcgtttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 25876034  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  25876033 atattaaagttaac 25876020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 25876280 - 25876168
Alignment:
Q  23 cctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttata 122  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25876280 cctattgcataaatttactattttaaccctgaagctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttata 25876181  T
Q  123 tattaaagttaac 135  Q
    |||||||||||||    
T  25876180 tattaaagttaac 25876168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 25 - 135
Target Start/End: Complemental strand, 18485931 - 18485821
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatata 124  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18485931 tattgcataaatttactattttaaccctgattctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttatata 18485832  T
Q  125 ttaaagttaac 135  Q
    |||||||||||    
T  18485831 ttaaagttaac 18485821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 135
Target Start/End: Original strand, 17694914 - 17695024
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatata 124  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  17694914 tattgcataaatttactattttaaccctgatgctaaattcctttgttttaccttattgaattttctcccttctcaatttctcgatacatcttcttatata 17695013  T
Q  125 ttaaagttaac 135  Q
    |||||||||||    
T  17695014 ttaaagttaac 17695024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 410338 - 410235
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  410338 acctattgcataaatttactattttaaccctgatactaaattcctttgtttaaccttattgaattttttcccttctcaatttctcgatacatcttcttat 410239  T
Q  122 atat 125  Q
    ||||    
T  410238 atat 410235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 18482608 - 18482509
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18482608 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 18482509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 9061269 - 9061382
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||    
T  9061269 acctattaaataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccgcttctcaatttcccgatacatcttcttat 9061368  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  9061369 atattaaagttaac 9061382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 17695059 - 17695156
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttctt 119  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17695059 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttctt 17695156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 24011451 - 24011348
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24011451 acctattaaataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 24011352  T
Q  122 atat 125  Q
    ||||    
T  24011351 atat 24011348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 9061174 - 9061238
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatt 86  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9061174 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaatt 9061238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 24011546 - 24011482
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatt 86  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24011546 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaatt 24011482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 9061417 - 9061476
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttatt 81  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9061417 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttatt 9061476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 18482452 - 18482397
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaacct 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18482452 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaacct 18482397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 405565 - 405513
Alignment:
Q  186 cttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 238  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  405565 cttttggcaaaatctcttatgttattaaattatagattgctgctcaatgtcac 405513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 44831898 - 44831846
Alignment:
Q  186 cttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 238  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44831898 cttttggcaaaatctcttatgttattaaattatagattgctgctcaatgtcac 44831846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 17695452 - 17695503
Alignment:
Q  187 ttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 238  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17695452 ttttggcaaaatctcttatgttattaaattatagattgctgctcaatgtcac 17695503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 18485708 - 18485664
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcct 66  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  18485708 acctattgcataaatttactattttaaccctgatgctaaattcct 18485664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 24014327 - 24014287
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  24014327 tattgcataaatttactattttaaccctgatgctaaattcc 24014287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 25875985 - 25875942
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    |||||||||||| |||||||||||||||  ||||||||||||||    
T  25875985 acctattgcatatatttactattttaacgctgatgctaaattcc 25875942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 3e-78; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 22 - 185
Target Start/End: Original strand, 37099325 - 37099488
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37099325 acctattgcataaatttactatttaaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 37099424  T
Q  122 atattaaagttaactaaacatattttgaatcaattatagaaatttctttcaacataatttttgt 185  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37099425 atattaaagttaactaaacatattttgaatcaattatacaaatttctttcaacataatttttgt 37099488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 22 - 185
Target Start/End: Original strand, 37098942 - 37099105
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37098942 acctattgcataaatttactattttaactctgatgctaaatttctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 37099041  T
Q  122 atattaaagttaactaaacatattttgaatcaattatagaaatttctttcaacataatttttgt 185  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  37099042 atattaaagttaactaaacatattttaaatcaattatacaaatttctttcaacataatttttgt 37099105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 36078211 - 36078098
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36078211 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 36078112  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  36078111 atattaaagttaac 36078098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 36077762 - 36077649
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36077762 acctattgcataaatttactattttaaccctgatgctaaattcatttgtttaaccttattgaatttttcctcttctcaatttctcgatacatcttcttat 36077663  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  36077662 atattaaagttaac 36077649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 39145839 - 39145952
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  39145839 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatgcatcttcttat 39145938  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  39145939 atattaaagttaac 39145952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 36077614 - 36077502
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  36077614 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaa-tttcccccttctcaatttctcgatacatcttcttat 36077516  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  36077515 atattaaagttaac 36077502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 36078063 - 36077950
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  36078063 acctattgcataaatttactatttcaaccctgatgctaaattcctttgtttaatcttattgaatttctccccttctcaatttctcgatacatcttcttat 36077964  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  36077963 atattaaagttaac 36077950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 36078359 - 36078246
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  36078359 acctattgcataaatttacaattttaaccctgatgctaaattcctttgtttaaccttattgaatttctccccttctcaatttctcgatacatcttctgat 36078260  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  36078259 atattaaagttaac 36078246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 7606117 - 7606004
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  7606117 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccctttctcaatttctctatacatcttcttat 7606018  T
Q  122 atattaaagttaac 135  Q
    |||||| |||||||    
T  7606017 atattacagttaac 7606004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 7605648 - 7605543
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  7605648 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttctctcttctcaatttctcgatacatcttcttat 7605549  T
Q  122 atatta 127  Q
    ||||||    
T  7605548 atatta 7605543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 7605808 - 7605705
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  7605808 acctattgcataaatttactattttaaccatgatgctaaattccttggtttaaccttattgaattttcctcctactcaatttctcgatacatcttcttat 7605709  T
Q  122 atat 125  Q
    ||||    
T  7605708 atat 7605705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 16652008 - 16652111
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  16652008 accttttgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttcccgatacatcttcttat 16652107  T
Q  122 atat 125  Q
    ||||    
T  16652108 atat 16652111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 37434654 - 37434757
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  37434654 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattaaatttccccccttctcaatttctcgatacatcttcttat 37434753  T
Q  122 atat 125  Q
    ||||    
T  37434754 atat 37434757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 36077915 - 36077797
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatc-----tt 116  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||     ||    
T  36077915 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccctttctcaatttctcgatacatcttctctt 36077816  T
Q  117 cttatatattaaagttaac 135  Q
    |||||||||||||||||||    
T  36077815 cttatatattaaagttaac 36077797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 39145620 - 39145728
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||     ||||||||||| ||||||||||||||||||||||||||||||||    
T  39145620 acctattgcataaatttactattttaaccctgatgctaaattcctttgttt-----tattgaattttcccccttctcaatttctcgatacatcttcttat 39145714  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  39145715 atattaaagttaac 39145728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 16652171 - 16652271
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatata 124  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  16652171 tattgcataaatttactattttaactctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttcccgatacatcttcttatata 16652270  T
Q  125 t 125  Q
    |    
T  16652271 t 16652271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 7605967 - 7605865
Alignment:
Q  23 cctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttata 122  Q
    |||||||||||| ||||||||||||||| || || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7605967 cctattgcataattttactattttaaccctggtgttaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttata 7605868  T
Q  123 tat 125  Q
    |||    
T  7605867 tat 7605865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 16651848 - 16651951
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  16651848 acctattgcataactttactattttaaccctgatgctaaattcctttgttgaaccttattgaattttcccccttcttaatttcccgatacatcttcttat 16651947  T
Q  122 atat 125  Q
    ||||    
T  16651948 atat 16651951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 37434014 - 37434117
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||  ||||||||||||||| ||||||||||||||||    
T  37434014 acctattgcataaatttactattttaaccctgatgctaaattcatttgtttaaccttattaaatttccccccttctcaatttcccgatacatcttcttat 37434113  T
Q  122 atat 125  Q
    ||||    
T  37434114 atat 37434117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 37435041 - 37435144
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  || |||||||||||| |||| |||||||||||    
T  37435041 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaatttccccacttctcaatttcccgatgcatcttcttat 37435140  T
Q  122 atat 125  Q
    ||||    
T  37435141 atat 37435144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 36220453 - 36220560
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatat 123  Q
    ||||||||||||||||||||||||||| ||   ||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  36220453 ctattgcataaatttactattttaaccctg---ctaaatttctttgtttaaccttattgaatttc-ccccttctcaatttctcgatacatcttcttatat 36220548  T
Q  124 attaaagttaac 135  Q
    ||||||||||||    
T  36220549 attaaagttaac 36220560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 7605453 - 7605363
Alignment:
Q  35 atttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatatat 125  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||    
T  7605453 atttactattttaaccctgatgctaaattcctttgtttaaccttattaaatttccccccttctcaatttctcgatacatcttcttatatat 7605363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 37434501 - 37434597
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||  ||||||||||||||  | ||||||||||||||    
T  37434501 tattgcataaatttaccattttaaccctgctgctaaattcctttgtttaaccttattgaatttccccccttctcaattttccaatacatcttcttat 37434597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 37434885 - 37434984
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcg-atacatcttctta 120  Q
    ||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||  |||||||||||||| ||| |||||||||||||    
T  37434885 acctattgcataaatttaccattttaaccctgctgctaaattcctttgtttaaccttattgaatttccccccttctcaattt-tcgaatacatcttctta 37434983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 37434248 - 37434344
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcg-atacatcttcttat 121  Q
    |||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||  |||||||||||||| ||| ||||||||||||||    
T  37434248 tattgcataaatttaccattttaaccctgctgctaaattcctttgtttaaccttattgaatttccccccttctcaattt-tcgaatacatcttcttat 37434344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 36078476 - 36078394
Alignment:
Q  58 taaattcctttgtttaaccttattgaatttttccccttctcaatttctcgataca-----tcttcttatatattaaagttaac 135  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||     |||||||||||||||||||||||    
T  36078476 taaattcctttgtttaaccttattgaattttccctcttctcaatttctcgatacattttctcttcttatatattaaagttaac 36078394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 16652331 - 16652387
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttatt 81  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  16652331 tattgcataaatttactatttgaaccctgatgctgaattcctttgtttaaccttatt 16652387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 37099179 - 37099230
Alignment:
Q  186 cttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 238  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37099179 cttttggcaaaatctctt-tgttattaaattatagattgctgctcaatgtcac 37099230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 37099562 - 37099614
Alignment:
Q  186 cttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 238  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  37099562 cttttggcaaaatctcttatgttattaaattatagattgttgctcaatgtcac 37099614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 7605302 - 7605247
Alignment:
Q  26 attgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttatt 81  Q
    |||||||||||||||||||| |||| ||||||| |||||||| |||||||||||||    
T  7605302 attgcataaatttactatttgaaccctgatgctgaattccttcgtttaaccttatt 7605247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 7606278 - 7606235
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  7606278 acctattgcataaatttactattttaaccctgatgctaaattcc 7606235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 36077467 - 36077425
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattc 64  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  36077467 acctattgcataaatttactattttaaccctgatgctaaattc 36077425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 37434401 - 37434441
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaat 62  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  37434401 acctattgcataaatttactattttaaccctgatgctaaat 37434441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 7605500 - 7605457
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||    
T  7605500 acctattgcataaatttactatttgaaccctgatgctgaattcc 7605457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 39145765 - 39145798
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgc 57  Q
    ||||||||||||||||||||||||||| ||||||    
T  39145765 ctattgcataaatttactattttaaccctgatgc 39145798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 39145987 - 39146023
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgct 58  Q
    |||||||||||||||||||||||| |||| |||||||    
T  39145987 acctattgcataaatttactatttaaaccctgatgct 39146023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 146; Significance: 5e-77; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 24 - 185
Target Start/End: Complemental strand, 10669 - 10509
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatat 123  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10669 ctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaatttt-ccccttctcaatttctcgatacatcttcttatat 10571  T
Q  124 attaaagttaactaaacatattttgaatcaattatagaaatttctttcaacataatttttgt 185  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10570 attaaagttaactaaacatattttgaatcaattatataaatttctttcaacataatttttgt 10509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 10435 - 10383
Alignment:
Q  186 cttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10435 cttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 10383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 1e-74; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 22 - 183
Target Start/End: Original strand, 19744838 - 19744999
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  19744838 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttctcccttctcaatttctcgatacatcttcttat 19744937  T
Q  122 atattaaagttaactaaacatattttgaatcaattatagaaatttctttcaacataattttt 183  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  19744938 atattaaagttaactaaacatattttgaatcaattatacaaatttctttcaacataaatttt 19744999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 22 - 183
Target Start/End: Complemental strand, 19794968 - 19794807
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  19794968 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttctcccttctcaatttctcgatacatcttcttat 19794869  T
Q  122 atattaaagttaactaaacatattttgaatcaattatagaaatttctttcaacataattttt 183  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  19794868 atattaaagttaactaaacatattttgaatcaattatacaaatttctttcaacataaatttt 19794807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 23977142 - 23976993
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatata 124  Q
    |||| ||||||||||||||||||||| ||||        |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23977142 tattacataaatttactattttaaccctgat--------cctttgattaaccttattgaattttcccccttctcaatttctcgatacatcttcttatata 23977051  T
Q  125 ttaaagttaactaaacatattttgaatcaattatagaaatttctttcaacataatttt 182  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  23977050 ttaaagttaactaaacatattttgaatcaattatacaaatttcttttaacataatttt 23976993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 41384012 - 41384123
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatat 123  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41384012 ctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttatat 41384111  T
Q  124 attaaagttaac 135  Q
    ||||||||||||    
T  41384112 attaaagttaac 41384123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 25 - 135
Target Start/End: Original strand, 19744693 - 19744803
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatata 124  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19744693 tattgcataaatttactattttaaccttgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttatata 19744792  T
Q  125 ttaaagttaac 135  Q
    |||||||||||    
T  19744793 ttaaagttaac 19744803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 25 - 135
Target Start/End: Complemental strand, 19795113 - 19795003
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatata 124  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19795113 tattgcataaatttactattttaaccttgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttatata 19795014  T
Q  125 ttaaagttaac 135  Q
    |||||||||||    
T  19795013 ttaaagttaac 19795003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 19744092 - 19744205
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  19744092 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttcccaatttctcgatacatcttcttat 19744191  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  19744192 atattaaagttaac 19744205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 19744464 - 19744577
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19744464 acctattgcataaattcactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 19744563  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  19744564 atattaaagttaac 19744577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 19795342 - 19795229
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19795342 acctattgcataaattcactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 19795243  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  19795242 atattaaagttaac 19795229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 19795714 - 19795601
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19795714 acctattgcgtaaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 19795615  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  19795614 atattaaagttaac 19795601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 19744316 - 19744429
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19744316 acctattgcataaatttactattttaaccctaatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 19744415  T
Q  122 atattaaagttaac 135  Q
    ||||||||| ||||    
T  19744416 atattaaagctaac 19744429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 19795490 - 19795377
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19795490 acctattgcataaatttactattttaaccctaatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 19795391  T
Q  122 atattaaagttaac 135  Q
    ||||||||| ||||    
T  19795390 atattaaagctaac 19795377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 135
Target Start/End: Original strand, 37591644 - 37591754
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatata 124  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  37591644 tattgcataaatttaatattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttatcgatacatcttcttatata 37591743  T
Q  125 ttaaagttaac 135  Q
    |||||||||||    
T  37591744 ttaaagttaac 37591754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 19743945 - 19744057
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19743945 acctattgcataaatttactattttaaccctgatgctaaatttcttggtt-aaccttattgaattttcccccttctcaatttctcgatacatcttcttat 19744043  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  19744044 atattaaagttaac 19744057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 13138073 - 13138175
Alignment:
Q  33 aaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatatattaaagtt 132  Q
    |||||||||||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13138073 aaatttactattttaatcctgatgctaaattcatttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttatatattaaagtt 13138172  T
Q  133 aac 135  Q
    |||    
T  13138173 aac 13138175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 19795850 - 19795749
Alignment:
Q  34 aatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatatattaaagtta 133  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||    
T  19795850 aatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttcccaatttctcgatacatcttcttatatattaaagcta 19795751  T
Q  134 ac 135  Q
    ||    
T  19795750 ac 19795749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 19796143 - 19796031
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  19796143 acctattgcataaatttactattttaaccctgatgctaaatttcttggtt-aaccttattgaattttcccccttcccaatttctcgatacatcttcttat 19796045  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  19796044 atattaaagttaac 19796031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 41383854 - 41383953
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  41383854 acctattacataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcctccttctcaatttctcgatacatcttcttat 41383953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 41384158 - 41384268
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||   ||||||    
T  41384158 acctattgcataaatttactattttaaccctgatgctaaattcatttgtttaaccttattgaattttcccctttctcaatttctcgataca---tcttat 41384254  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  41384255 atattaaagttaac 41384268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 41383699 - 41383797
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  41383699 acctattgcataaatttactattttaaccctgatgttaaattcctt-gtttaaccttattgaatttccccccttctcaatttctcgatacatcttcttat 41383797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 19745076 - 19745128
Alignment:
Q  186 cttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19745076 cttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 19745128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 19794730 - 19794678
Alignment:
Q  186 cttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19794730 cttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 19794678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 23976917 - 23976865
Alignment:
Q  186 cttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23976917 cttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 23976865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 37591975 - 37591932
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  37591975 acctattgcataaatttactattttaaccctgatgctaaattcc 37591932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 37592089 - 37592046
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  37592089 acctattgcataaatttactattttaaccctgatgctaaattcc 37592046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 37592203 - 37592160
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  37592203 acctattgcataaatttactattttaaccctgatgctaaattcc 37592160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 41384303 - 41384346
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    ||||||||||||||||||||||||||||  ||||||||||||||    
T  41384303 acctattgcataaatttactattttaacgctgatgctaaattcc 41384346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 13138288 - 13138331
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    |||||||||||||||||||||||||||   ||||||||||||||    
T  13138288 acctattgcataaatttactattttaatgctgatgctaaattcc 13138331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 37592317 - 37592276
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaatt 63  Q
    ||||||||||||||||||||||||||||  ||||| ||||||    
T  37592317 acctattgcataaatttactattttaactctgatgttaaatt 37592276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 50
Target Start/End: Complemental strand, 44376766 - 44376738
Alignment:
Q  22 acctattgcataaatttactattttaacc 50  Q
    |||||||||||||||||||||||||||||    
T  44376766 acctattgcataaatttactattttaacc 44376738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 122; Significance: 1e-62; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 22 - 159
Target Start/End: Complemental strand, 33289368 - 33289231
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33289368 acctcttgcataaatttactattttaatcctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 33289269  T
Q  122 atattaaagttaactaaacatattttgaatcaattata 159  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33289268 atattaaagttaactaaacatattttgaatcaattata 33289231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 918826 - 918939
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  918826 acctattacataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 918925  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  918926 atattaaagttaac 918939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 2004447 - 2004558
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2004447 acctattgcataaatttactattttaacc-tgatgctaaattcctttgtttaaccttattgaatttt-ccccttctcaatttctcgatacatcttcttat 2004544  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  2004545 atattaaagttaac 2004558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 8658385 - 8658285
Alignment:
Q  25 tattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatata 124  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8658385 tattgcataaatttactattttaaccctgatgctaaattcatttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttatata 8658286  T
Q  125 t 125  Q
    |    
T  8658285 t 8658285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 918674 - 918791
Alignment:
Q  17 actagacctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatctt 116  Q
    |||| ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||| || |||||||||||||||||||| ||||||||||    
T  918674 actaaacctattgcataaatttactattttaactctgatgctaaattcctttctttaaccttatt-aaattttccccttctcaatttcttgatacatctt 918772  T
Q  117 cttatatattaaagttaac 135  Q
    |||||||||||||||||||    
T  918773 cttatatattaaagttaac 918791  T

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Target: chr6; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 920484 - 920587
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  920484 acctattgcataaatttactattttaaacctgatgctaaattcctttgtttaaccttattgaattttcccccttctcaattttccgatacatcttcttat 920583  T
Q  122 atat 125  Q
    ||||    
T  920584 atat 920587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 8658850 - 8658740
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatat 123  Q
    |||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  8658850 ctattgcataaatttactatttaaactctgatgctaaattcttttgtttaaccttattgaattttcccccttctcaatttctcga-acatcttcttatat 8658752  T
Q  124 attaaagttaac 135  Q
    ||||||||||||    
T  8658751 attaaagttaac 8658740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 33289524 - 33289425
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  33289524 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaatcttattgaattttcccccttctcaatttctcgatacatcttattat 33289425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 8658534 - 8658423
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||    
T  8658534 acctattgcataaatttactattttaaccctgatgataaattcatttgtttaaccttattgaa-tttcccccttctcaatttctcga-acatcttcttat 8658437  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  8658436 atattaaagttaac 8658423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 918974 - 919076
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||    
T  918974 acctattgcataaatttaatattttaaccctgatgctaaattcctttgtttaaccttattgaa-tttcccccttctcaatttcccgatacatcttcttat 919072  T
Q  122 atat 125  Q
    ||||    
T  919073 atat 919076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 24570980 - 24570898
Alignment:
Q  53 gatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttatatattaaagttaac 135  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24570980 gatgttaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttatatattaaagttaac 24570898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 33034626 - 33034742
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatct------tc 117  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||      ||    
T  33034626 ctattgcataagtttactattttaaccctgatgctaaattcctttgtttaaccttattgaa-ttttccccctctcaatttctcgatacatcttatatatc 33034724  T
Q  118 ttatatattaaagttaac 135  Q
    ||||||||||||||||||    
T  33034725 ttatatattaaagttaac 33034742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 33034779 - 33034895
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatct------tc 117  Q
    |||||||||||||||||||||||| || | ||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||      ||    
T  33034779 ctattgcataaatttactattttatccctaatgttaaattcctttgtttaaccttattgaa-ttttccccctctcaatttctcgatacatcttatatatc 33034877  T
Q  118 ttatatattaaagttaac 135  Q
    ||||||||||||||||||    
T  33034878 ttatatattaaagttaac 33034895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 2004593 - 2004659
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttt 88  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2004593 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaaccttattgaatttt 2004659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 24570863 - 24570811
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaa 74  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24570863 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaa 24570811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 920646 - 920703
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttatt 81  Q
    |||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  920646 ctattgcataaatttactatttgaaccctgatgctaaattcatttgtttaaccttatt 920703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 8657402 - 8657349
Alignment:
Q  132 taactaaacatattttgaatcaattatagaaatttctttcaacataatttttgt 185  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  8657402 taactaaacatattttgaatcaattatacaaatttcttttaacataatttttgt 8657349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 8658091 - 8658038
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaac 75  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  8658091 acctattgcataaatttactattttaaccctgatgctaaattcatttgtttaac 8658038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 8657275 - 8657223
Alignment:
Q  186 cttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 238  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  8657275 cttttggcaaaatctcttctattattaaattatagattgttgctcaatgtcac 8657223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 8658634 - 8658591
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  8658634 acctattgcataaatttactattttaaccctgatgctaaattcc 8658591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 919135 - 919176
Alignment:
Q  24 ctattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  919135 ctattgcataaatttactattttaaccctgatgctaaattcc 919176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 33034930 - 33034973
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    ||||||||||||||||||||||||||||  ||||||||||||||    
T  33034930 acctattgcataaatttactattttaacgttgatgctaaattcc 33034973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 8658228 - 8658185
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcc 65  Q
    ||||||||||||||| ||||||||||||| | ||||||||||||    
T  8658228 acctattgcataaatgtactattttaaccctaatgctaaattcc 8658185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 23255 - 23368
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaaccttattgaatttttccccttctcaatttctcgatacatcttcttat 121  Q
    ||||||||||||||||||||| ||||||| | || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23255 acctattgcataaatttactactttaaccctaatactaaattcctttgtttaaccttattgaattttcccccttctcaatttctcgatacatcttcttat 23354  T
Q  122 atattaaagttaac 135  Q
    ||||||||||||||    
T  23355 atattaaagttaac 23368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 50
Target Start/End: Original strand, 23403 - 23431
Alignment:
Q  22 acctattgcataaatttactattttaacc 50  Q
    |||||||||||||||||||||||||||||    
T  23403 acctattgcataaatttactattttaacc 23431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 12678 - 12626
Alignment:
Q  22 acctattgcataaatttactattttaaccatgatgctaaattcctttgtttaa 74  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12678 acctattgcataaatttactattttaaccctgatgctaaattcctttgtttaa 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 808 - 861
Alignment:
Q  132 taactaaacatattttgaatcaattatagaaatttctttcaacataatttttgt 185  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  808 taactaaacatattttgaatcaattatacaaatttcttttaacataatttttgt 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 935 - 987
Alignment:
Q  186 cttttggcaaaatctcttctgttattaaattatagattgctgctcaatgtcac 238  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  935 cttttggcaaaatctcttctattattaaattatagattgttgctcaatgtcac 987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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