View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19718_low_7 (Length: 475)
Name: NF19718_low_7
Description: NF19718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19718_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 455; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 1 - 463
Target Start/End: Original strand, 34078319 - 34078781
Alignment:
| Q |
1 |
ccgtgcaaaaacatctttaacaagatgttgtgcttcttcttgacgatgttttgagaaggattcaagtctctttgtagttagtaagtgttccatgcaaatt |
100 |
Q |
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| T |
34078319 |
ccgtgcaaaaacatctttaacaagatgttgtgcttcttcttgacgatgttttgagaaggattcaagtctctttgtagttagtaagtgttccatgcaaatt |
34078418 |
T |
|
| Q |
101 |
cttctcattcgcttccaatgaggtcctaatggtgccaatgcaacatcaccacacccatatgctaaatgaattgcagcaagagtgcgtggacgagaggcaa |
200 |
Q |
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| T |
34078419 |
cttctcattcgcttccaatgaggtcctaatggtgccaatgcaacatcaccacacccatatgctaaatgaattgcagcaagagtgcgtggacgagaggcaa |
34078518 |
T |
|
| Q |
201 |
aaacatcatcttgagaaagaagtatttcacgtataatatcagggtcattagtagtaatagcatcaatatttcctaattttaaataaactaagggtccata |
300 |
Q |
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| T |
34078519 |
aaacatcatcttgagaaagaagtatttcacgtataatatcagggtcattagtagtaatagcatcaatatttcctaattttaaataaactaagggtccata |
34078618 |
T |
|
| Q |
301 |
tttatcacataatgatgctaagtctctatgaggaagttgccctaattggagaaggttaccaacaataggccaccttggtgggccaggaggaaggttattt |
400 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34078619 |
tttatcgcataatgatgctaagtctctatgaggaagttgccctaattggagaaggttaccaacaataggccaccttggtgggccaggaggaaggttattt |
34078718 |
T |
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| Q |
401 |
ttcttatgcaaagatggagattttcctatatgcctatctcgaatgatttttgagactaatatt |
463 |
Q |
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| T |
34078719 |
ttcttatccaaagatggagattttcctatatgcctatctcgaatgatttttgagactaatatt |
34078781 |
T |
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