View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19719_low_13 (Length: 245)

Name: NF19719_low_13
Description: NF19719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19719_low_13
NF19719_low_13
[»] chr7 (36 HSPs)
chr7 (65-243)||(19830418-19830596)
chr7 (67-243)||(19590525-19590701)
chr7 (66-243)||(37786766-37786943)
chr7 (64-241)||(2659211-2659388)
chr7 (65-241)||(34534162-34534338)
chr7 (62-241)||(32004985-32005164)
chr7 (66-243)||(38858642-38858819)
chr7 (65-241)||(35289272-35289448)
chr7 (70-243)||(29100220-29100393)
chr7 (70-243)||(4641443-4641616)
chr7 (63-227)||(19590909-19591074)
chr7 (73-236)||(23953105-23953268)
chr7 (65-236)||(4478076-4478247)
chr7 (63-225)||(37787153-37787316)
chr7 (63-227)||(38859025-38859190)
chr7 (65-227)||(2658837-2659000)
chr7 (66-227)||(19830804-19830965)
chr7 (65-226)||(32004612-32004774)
chr7 (67-226)||(35288903-35289063)
chr7 (65-227)||(34533789-34533952)
chr7 (61-206)||(38160945-38161090)
chr7 (65-205)||(28583437-28583577)
chr7 (64-184)||(23952727-23952848)
chr7 (80-193)||(29099863-29099976)
chr7 (68-206)||(28584328-28584466)
chr7 (70-227)||(4641828-4641983)
chr7 (66-142)||(49064033-49064109)
chr7 (155-243)||(35579256-35579344)
chr7 (201-236)||(32427397-32427432)
chr7 (197-243)||(35579028-35579074)
chr7 (66-131)||(39137014-39137080)
chr7 (65-118)||(787281-787334)
chr7 (69-226)||(9393738-9393894)
chr7 (200-236)||(9394108-9394144)
chr7 (66-118)||(34595267-34595319)
chr7 (62-118)||(48247582-48247638)
[»] chr6 (36 HSPs)
chr6 (57-243)||(11276951-11277137)
chr6 (67-243)||(10900299-10900475)
chr6 (65-243)||(20741098-20741276)
chr6 (65-243)||(18257135-18257313)
chr6 (66-243)||(15828010-15828187)
chr6 (63-243)||(11444983-11445163)
chr6 (65-241)||(12935528-12935704)
chr6 (57-243)||(28472627-28472812)
chr6 (57-243)||(29859816-29860001)
chr6 (63-243)||(31470685-31470865)
chr6 (67-241)||(1149802-1149977)
chr6 (64-227)||(2319669-2319832)
chr6 (70-243)||(2322588-2322760)
chr6 (64-227)||(12935154-12935318)
chr6 (70-236)||(10899942-10900109)
chr6 (68-243)||(18505288-18505463)
chr6 (53-227)||(22219737-22219912)
chr6 (65-227)||(23075512-23075675)
chr6 (62-227)||(11445371-11445537)
chr6 (66-243)||(23073998-23074164)
chr6 (67-230)||(4811372-4811535)
chr6 (70-193)||(18504922-18505045)
chr6 (66-227)||(31470314-31470476)
chr6 (66-227)||(20741485-20741650)
chr6 (67-184)||(18257565-18257682)
chr6 (66-236)||(11276589-11276760)
chr6 (69-206)||(29033436-29033574)
chr6 (57-206)||(18296135-18296283)
chr6 (70-203)||(3835135-3835268)
chr6 (69-206)||(29035043-29035180)
chr6 (68-193)||(15827639-15827766)
chr6 (67-193)||(4811675-4811801)
chr6 (65-155)||(1149463-1149553)
chr6 (160-242)||(35163557-35163639)
chr6 (67-123)||(22534214-22534270)
chr6 (63-112)||(5120970-5121019)
[»] scaffold0295 (2 HSPs)
scaffold0295 (64-243)||(4790-4969)
scaffold0295 (69-181)||(5222-5334)
[»] chr1 (45 HSPs)
chr1 (66-243)||(50970647-50970824)
chr1 (66-243)||(29869619-29869796)
chr1 (65-243)||(18984117-18984295)
chr1 (70-243)||(15173099-15173272)
chr1 (66-236)||(5540194-5540364)
chr1 (67-236)||(29306953-29307122)
chr1 (66-236)||(15646571-15646741)
chr1 (69-243)||(33144288-33144462)
chr1 (70-243)||(5962947-5963120)
chr1 (67-243)||(21856412-21856588)
chr1 (60-243)||(8678911-8679093)
chr1 (60-243)||(17433209-17433392)
chr1 (63-243)||(9018969-9019149)
chr1 (69-243)||(39154021-39154195)
chr1 (65-241)||(26859431-26859606)
chr1 (67-236)||(29307317-29307487)
chr1 (69-229)||(17433597-17433758)
chr1 (66-227)||(18984503-18984665)
chr1 (65-225)||(50970276-50970437)
chr1 (65-227)||(15646190-15646353)
chr1 (63-227)||(21856038-21856203)
chr1 (67-227)||(29870003-29870164)
chr1 (68-227)||(5539817-5539977)
chr1 (68-184)||(8678542-8678658)
chr1 (68-226)||(4636356-4636515)
chr1 (65-227)||(15173478-15173640)
chr1 (63-236)||(9019338-9019512)
chr1 (66-227)||(39154404-39154566)
chr1 (75-227)||(33143925-33144078)
chr1 (67-184)||(26859059-26859176)
chr1 (66-206)||(52268289-52268429)
chr1 (68-227)||(5962579-5962739)
chr1 (127-241)||(4636033-4636146)
chr1 (63-153)||(2733416-2733506)
chr1 (69-183)||(52269177-52269291)
chr1 (67-227)||(17112282-17112442)
chr1 (69-142)||(47826966-47827039)
chr1 (62-167)||(47827033-47827137)
chr1 (57-229)||(44802555-44802727)
chr1 (203-243)||(39485200-39485240)
chr1 (67-146)||(50419727-50419806)
chr1 (203-237)||(17088516-17088550)
chr1 (69-118)||(50304441-50304490)
chr1 (70-118)||(17641864-17641912)
chr1 (66-118)||(29438929-29438981)
[»] chr5 (49 HSPs)
chr5 (63-243)||(18183338-18183518)
chr5 (65-243)||(2865124-2865302)
chr5 (67-243)||(5819298-5819474)
chr5 (67-243)||(8647438-8647614)
chr5 (67-243)||(19359136-19359312)
chr5 (62-243)||(15708966-15709146)
chr5 (65-243)||(24362205-24362383)
chr5 (65-243)||(8460928-8461106)
chr5 (66-243)||(29455111-29455288)
chr5 (63-243)||(164560-164740)
chr5 (64-239)||(14215616-14215791)
chr5 (63-243)||(15372242-15372422)
chr5 (65-232)||(14463901-14464067)
chr5 (65-227)||(18182968-18183131)
chr5 (63-227)||(8647822-8647987)
chr5 (66-243)||(16018588-16018763)
chr5 (65-227)||(5818927-5819090)
chr5 (65-227)||(19359520-19359683)
chr5 (73-227)||(24361843-24361997)
chr5 (69-227)||(2864756-2864915)
chr5 (66-227)||(8461315-8461477)
chr5 (73-227)||(24325218-24325372)
chr5 (69-243)||(24331929-24332107)
chr5 (69-227)||(14215243-14215402)
chr5 (63-227)||(24331555-24331722)
chr5 (66-229)||(25000471-25000635)
chr5 (89-243)||(25000112-25000266)
chr5 (66-227)||(29454739-29454901)
chr5 (65-229)||(16018969-16019134)
chr5 (67-226)||(164191-164350)
chr5 (67-206)||(7349423-7349562)
chr5 (67-227)||(15709353-15709513)
chr5 (68-187)||(4222147-4222266)
chr5 (67-193)||(7348559-7348685)
chr5 (69-180)||(15371873-15371983)
chr5 (73-205)||(6019177-6019309)
chr5 (67-206)||(4623148-4623285)
chr5 (67-205)||(4219663-4219800)
chr5 (68-209)||(6018315-6018455)
chr5 (80-208)||(4624629-4624757)
chr5 (1-66)||(26606250-26606315)
chr5 (120-206)||(13814134-13814224)
chr5 (184-243)||(24325580-24325639)
chr5 (149-193)||(14462686-14462730)
chr5 (65-142)||(15029780-15029857)
chr5 (197-241)||(32305947-32305991)
chr5 (66-229)||(41834443-41834606)
chr5 (61-120)||(4967264-4967323)
chr5 (197-243)||(16752711-16752757)
[»] scaffold0273 (2 HSPs)
scaffold0273 (65-243)||(4576-4754)
scaffold0273 (106-227)||(4242-4364)
[»] chr8 (36 HSPs)
chr8 (61-243)||(19176659-19176841)
chr8 (64-243)||(44831614-44831793)
chr8 (62-243)||(12571858-12572040)
chr8 (65-240)||(41681132-41681306)
chr8 (63-241)||(11656451-11656630)
chr8 (66-243)||(9930026-9930203)
chr8 (62-243)||(13224636-13224816)
chr8 (70-243)||(33328161-33328334)
chr8 (65-243)||(31133218-31133396)
chr8 (67-243)||(9178005-9178180)
chr8 (66-227)||(13225023-13225185)
chr8 (64-227)||(19176287-19176451)
chr8 (63-227)||(33742918-33743082)
chr8 (66-227)||(44831246-44831408)
chr8 (70-227)||(9928912-9929070)
chr8 (66-227)||(11656841-11657003)
chr8 (63-193)||(34540967-34541097)
chr8 (120-241)||(33743290-33743411)
chr8 (67-184)||(41681562-41681679)
chr8 (61-243)||(4630161-4630337)
chr8 (68-226)||(31133605-31133764)
chr8 (70-227)||(12572235-12572393)
chr8 (69-227)||(33328524-33328683)
chr8 (65-175)||(11336959-11337069)
chr8 (63-205)||(10918122-10918264)
chr8 (65-221)||(4629795-4629952)
chr8 (66-206)||(8073958-8074097)
chr8 (148-206)||(43958266-43958324)
chr8 (197-242)||(18805292-18805337)
chr8 (65-100)||(9177665-9177700)
chr8 (66-107)||(10919691-10919732)
chr8 (64-117)||(35427308-35427361)
chr8 (61-112)||(43958203-43958254)
chr8 (64-118)||(15255850-15255904)
chr8 (159-227)||(9177724-9177793)
chr8 (61-89)||(5730811-5730839)
[»] chr3 (68 HSPs)
chr3 (67-243)||(39555946-39556122)
chr3 (65-243)||(5136978-5137156)
chr3 (65-243)||(31779021-31779199)
chr3 (52-241)||(20840545-20840734)
chr3 (70-243)||(41046703-41046876)
chr3 (63-243)||(24300925-24301105)
chr3 (66-243)||(37726928-37727105)
chr3 (66-243)||(23644461-23644638)
chr3 (69-243)||(25853596-25853770)
chr3 (64-222)||(48452986-48453144)
chr3 (67-236)||(43973441-43973610)
chr3 (71-243)||(22425182-22425354)
chr3 (63-243)||(30104478-30104657)
chr3 (58-241)||(32535330-32535517)
chr3 (66-243)||(27393946-27394123)
chr3 (63-243)||(26837725-26837904)
chr3 (66-243)||(17464860-17465038)
chr3 (59-243)||(26274936-26275119)
chr3 (63-227)||(43973824-43973989)
chr3 (58-227)||(37727314-37727484)
chr3 (65-227)||(4275748-4275911)
chr3 (66-227)||(20840945-20841107)
chr3 (66-227)||(27393660-27393822)
chr3 (66-227)||(39555577-39555739)
chr3 (61-229)||(29801798-29801967)
chr3 (64-227)||(17464488-17464652)
chr3 (66-227)||(30098147-30098309)
chr3 (66-227)||(31778652-31778814)
chr3 (67-227)||(25853234-25853395)
chr3 (70-227)||(32534962-32535120)
chr3 (64-227)||(5137365-5137529)
chr3 (70-206)||(25612383-25612519)
chr3 (63-227)||(22424810-22424975)
chr3 (58-227)||(23644849-23645019)
chr3 (67-208)||(23228412-23228552)
chr3 (67-188)||(29801356-29801477)
chr3 (65-227)||(26837358-26837521)
chr3 (67-206)||(50116815-50116954)
chr3 (70-227)||(24300560-24300717)
chr3 (70-227)||(26274570-26274728)
chr3 (68-206)||(32697107-32697244)
chr3 (58-206)||(51474739-51474888)
chr3 (65-206)||(37220555-37220696)
chr3 (70-227)||(41047083-41047239)
chr3 (65-205)||(45965936-45966076)
chr3 (68-181)||(51473429-51473542)
chr3 (69-205)||(25420548-25420684)
chr3 (86-195)||(18010162-18010271)
chr3 (65-143)||(37222040-37222118)
chr3 (60-244)||(49407789-49407972)
chr3 (63-206)||(25419140-25419283)
chr3 (70-208)||(32695706-32695843)
chr3 (66-206)||(23227261-23227395)
chr3 (67-243)||(55192118-55192293)
chr3 (64-243)||(27200062-27200240)
chr3 (64-243)||(36701466-36701645)
chr3 (183-243)||(29801532-29801592)
chr3 (160-243)||(37075781-37075864)
chr3 (64-118)||(52375826-52375880)
chr3 (62-243)||(50900898-50901078)
chr3 (57-120)||(49952039-49952102)
chr3 (66-118)||(330331-330383)
chr3 (58-118)||(2051286-2051346)
chr3 (70-118)||(22370599-22370647)
chr3 (66-98)||(25611497-25611529)
chr3 (66-118)||(49720856-49720908)
chr3 (66-118)||(51827956-51828008)
chr3 (63-91)||(55390119-55390147)
[»] chr2 (49 HSPs)
chr2 (65-241)||(11090519-11090695)
chr2 (66-243)||(40027139-40027316)
chr2 (63-243)||(40815714-40815894)
chr2 (64-243)||(239350-239528)
chr2 (65-243)||(22374318-22374496)
chr2 (63-243)||(18451200-18451380)
chr2 (66-243)||(26538096-26538273)
chr2 (67-241)||(28616613-28616788)
chr2 (65-243)||(1978106-1978284)
chr2 (70-240)||(14432145-14432315)
chr2 (67-243)||(43058333-43058509)
chr2 (63-236)||(26538454-26538628)
chr2 (64-243)||(3025463-3025641)
chr2 (69-227)||(40815347-40815506)
chr2 (70-236)||(8425736-8425902)
chr2 (66-206)||(20444748-20444888)
chr2 (60-227)||(22374709-22374877)
chr2 (63-227)||(7446730-7446895)
chr2 (66-241)||(7446341-7446519)
chr2 (66-227)||(18450829-18450991)
chr2 (68-206)||(35781069-35781207)
chr2 (65-227)||(11090904-11091067)
chr2 (63-206)||(20440438-20440580)
chr2 (61-227)||(43058717-43058883)
chr2 (70-227)||(40027524-40027682)
chr2 (67-206)||(35779708-35779847)
chr2 (65-226)||(1978494-1978656)
chr2 (66-227)||(28616998-28617160)
chr2 (68-227)||(239736-239896)
chr2 (65-184)||(28847123-28847242)
chr2 (70-226)||(8425358-8425514)
chr2 (63-227)||(14432525-14432690)
chr2 (69-206)||(8972239-8972376)
chr2 (69-206)||(15551501-15551638)
chr2 (67-226)||(3025848-3026006)
chr2 (69-206)||(15552460-15552596)
chr2 (64-243)||(28143400-28143578)
chr2 (70-206)||(3824115-3824251)
chr2 (57-118)||(33921107-33921168)
chr2 (58-118)||(6949939-6949999)
chr2 (58-118)||(38007941-38008001)
chr2 (66-118)||(42192738-42192790)
chr2 (67-118)||(4355755-4355806)
chr2 (66-225)||(31797166-31797324)
chr2 (65-232)||(14942225-14942394)
chr2 (64-118)||(25336095-25336149)
chr2 (58-118)||(20128232-20128292)
chr2 (66-118)||(43216204-43216256)
chr2 (66-118)||(44220140-44220192)
[»] scaffold0019 (1 HSPs)
scaffold0019 (61-243)||(134042-134224)
[»] scaffold0951 (2 HSPs)
scaffold0951 (65-241)||(1665-1841)
scaffold0951 (64-227)||(2051-2215)
[»] scaffold0007 (3 HSPs)
scaffold0007 (57-243)||(64292-64478)
scaffold0007 (70-182)||(64735-64847)
scaffold0007 (69-243)||(205738-205911)
[»] chr4 (69 HSPs)
chr4 (69-243)||(33109686-33109860)
chr4 (69-243)||(46193774-46193948)
chr4 (58-243)||(11153516-11153701)
chr4 (59-243)||(12234321-12234505)
chr4 (65-237)||(25447611-25447783)
chr4 (63-243)||(25937666-25937846)
chr4 (66-243)||(15523603-15523780)
chr4 (62-243)||(22434547-22434726)
chr4 (69-236)||(38962195-38962362)
chr4 (69-243)||(4219559-4219733)
chr4 (69-243)||(23494445-23494619)
chr4 (63-243)||(51020793-51020973)
chr4 (64-243)||(45082429-45082606)
chr4 (66-243)||(22170306-22170482)
chr4 (66-243)||(48526195-48526371)
chr4 (65-243)||(54995437-54995614)
chr4 (70-243)||(2118665-2118837)
chr4 (67-229)||(46193405-46193568)
chr4 (70-227)||(48526565-48526723)
chr4 (67-227)||(22434179-22434340)
chr4 (67-227)||(25447247-25447408)
chr4 (67-227)||(45082808-45082969)
chr4 (64-183)||(23494872-23494991)
chr4 (65-226)||(15523233-15523395)
chr4 (64-227)||(20470895-20471059)
chr4 (67-227)||(12234713-12234874)
chr4 (63-227)||(4219943-4220108)
chr4 (66-226)||(25938056-25938217)
chr4 (65-227)||(54995067-54995230)
chr4 (66-227)||(11153145-11153307)
chr4 (65-193)||(33109883-33110011)
chr4 (70-227)||(18751602-18751760)
chr4 (135-243)||(12503805-12503913)
chr4 (65-227)||(51021180-51021342)
chr4 (64-181)||(18763951-18764068)
chr4 (85-206)||(43243687-43243807)
chr4 (65-206)||(48293592-48293733)
chr4 (69-193)||(2118295-2118419)
chr4 (58-206)||(20958267-20958413)
chr4 (57-206)||(44892554-44892703)
chr4 (85-205)||(43281198-43281317)
chr4 (65-206)||(48713752-48713893)
chr4 (67-206)||(48294948-48295088)
chr4 (66-193)||(10258306-10258433)
chr4 (67-184)||(35363028-35363146)
chr4 (65-203)||(48708293-48708431)
chr4 (70-203)||(16690939-16691072)
chr4 (84-227)||(12503453-12503597)
chr4 (74-205)||(20957196-20957327)
chr4 (68-206)||(44890518-44890656)
chr4 (67-203)||(16691481-16691616)
chr4 (66-137)||(16318251-16318322)
chr4 (125-206)||(43242328-43242409)
chr4 (176-243)||(18751971-18752038)
chr4 (66-243)||(17503973-17504149)
chr4 (128-206)||(44220783-44220861)
chr4 (67-175)||(55189528-55189636)
chr4 (203-243)||(17504329-17504369)
chr4 (203-243)||(35193443-35193483)
chr4 (210-243)||(40160236-40160269)
chr4 (67-194)||(30597939-30598065)
chr4 (66-118)||(55677453-55677505)
chr4 (63-118)||(12593518-12593573)
chr4 (65-123)||(229159-229217)
chr4 (69-186)||(24336190-24336307)
chr4 (69-118)||(44219377-44219426)
chr4 (57-118)||(45838537-45838598)
chr4 (65-118)||(46737150-46737203)
chr4 (62-118)||(33689824-33689880)
[»] scaffold0432 (2 HSPs)
scaffold0432 (70-243)||(10242-10414)
scaffold0432 (70-174)||(9935-10039)
[»] scaffold1223 (2 HSPs)
scaffold1223 (69-243)||(755-928)
scaffold1223 (57-236)||(1116-1296)
[»] scaffold0027 (2 HSPs)
scaffold0027 (61-243)||(42528-42709)
scaffold0027 (70-236)||(42172-42339)
[»] scaffold0176 (2 HSPs)
scaffold0176 (66-234)||(18834-19001)
scaffold0176 (67-164)||(19069-19166)
[»] scaffold0417 (2 HSPs)
scaffold0417 (86-243)||(10640-10797)
scaffold0417 (67-193)||(11042-11168)
[»] scaffold0113 (1 HSPs)
scaffold0113 (66-193)||(28662-28789)
[»] scaffold0157 (2 HSPs)
scaffold0157 (135-243)||(16564-16672)
scaffold0157 (84-227)||(16880-17024)
[»] scaffold1585 (1 HSPs)
scaffold1585 (68-206)||(568-706)
[»] scaffold0057 (2 HSPs)
scaffold0057 (70-206)||(61864-62000)
scaffold0057 (57-141)||(61018-61102)
[»] scaffold1696 (1 HSPs)
scaffold1696 (71-206)||(454-587)
[»] scaffold0076 (1 HSPs)
scaffold0076 (70-170)||(8451-8551)
[»] scaffold0168 (1 HSPs)
scaffold0168 (122-206)||(7694-7778)
[»] scaffold1339 (1 HSPs)
scaffold1339 (64-92)||(30-58)
[»] scaffold0830 (1 HSPs)
scaffold0830 (64-92)||(5352-5380)


Alignment Details
Target: chr7 (Bit Score: 167; Significance: 1e-89; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 65 - 243
Target Start/End: Original strand, 19830418 - 19830596
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19830418 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19830517  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19830518 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 19830596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 67 - 243
Target Start/End: Original strand, 19590525 - 19590701
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  167 tgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19590625 tgcatttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttagacctaccccctatgct 19590701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 66 - 243
Target Start/End: Original strand, 37786766 - 37786943
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  37786766 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37786865  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37786866 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37786943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 64 - 241
Target Start/End: Complemental strand, 2659388 - 2659211
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    ||||||||||||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  2659388 ttaggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttt 2659289  T
Q  164 tgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatg 241  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2659288 tgttgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 2659211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 65 - 241
Target Start/End: Complemental strand, 34534338 - 34534162
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| |||||||||||||||||    
T  34534338 taggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcattttt 34534239  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatg 241  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  34534238 gttgcatttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttagacctaccacctatg 34534162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 62 - 241
Target Start/End: Complemental strand, 32005164 - 32004985
Alignment:
Q  62 atttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatt 161  Q
    |||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||    
T  32005164 attttggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatt 32005065  T
Q  162 tttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatg 241  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32005064 tttgttgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 32004985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 243
Target Start/End: Original strand, 38858642 - 38858819
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||  |||||||||||||||||    
T  38858642 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttg 38858741  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  38858742 ttgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccactatgct 38858819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 65 - 241
Target Start/End: Complemental strand, 35289448 - 35289272
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||     
T  35289448 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttg 35289349  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatg 241  Q
    ||||||||||||||| ||||||||||||||||||| |||||| ||||||||| | ||||||||||||||||||||||    
T  35289348 gttgcatttttcgtcataccccccattttattctctaaaaacgcagagaaataatagttttagacctaccccctatg 35289272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 29100393 - 29100220
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    |||||||||||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29100294  T
Q  170 atttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  29100293 attttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 29100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 4641443 - 4641616
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| ||||| |||||||||||  |||||||||||||||||||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgttgc 4641542  T
Q  170 atttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||| |||||||||||    
T  4641543 atttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttagacctgccccctatgct 4641616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 63 - 227
Target Start/End: Complemental strand, 19591074 - 19590909
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  19591074 tttaggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 19590975  T
Q  163 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  19590974 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 73 - 236
Target Start/End: Complemental strand, 23953268 - 23953105
Alignment:
Q  73 attacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcatt 172  Q
    |||||| |||||||||||||||||||  ||||||||||||||||||  ||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  173 tttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctacccc 236  Q
    ||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||    
T  23953168 tttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttagacatacccc 23953105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 65 - 236
Target Start/End: Complemental strand, 4478247 - 4478076
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||| |||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| || |  || |||||||||||||||||    
T  4478247 taggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcattttt 4478148  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctacccc 236  Q
    ||||||||||||||| || ||| ||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  4478147 gttgcatttttcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttagacctacccc 4478076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 63 - 225
Target Start/End: Complemental strand, 37787316 - 37787153
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  37787316 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcattt 37787217  T
Q  163 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagtttt 225  Q
    |||||||||||||||||||||| || ||||| |  ||||| |||| ||||||||||||||||||    
T  37787216 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 63 - 227
Target Start/End: Complemental strand, 38859190 - 38859025
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  38859190 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcattt 38859091  T
Q  163 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||||||| || ||||| |  ||||| |||| ||||||||||| ||||||||    
T  38859090 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 2658837 - 2659000
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||| |||||||||||||||||    
T  2658837 taggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 2658936  T
Q  165 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||| |||| || ||||| |  |||||||||| |||||||||| |||||||||    
T  2658937 gttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 2659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 19830965 - 19830804
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||| ||||||||||| ||||||||||||||||||    
T  19830965 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttg 19830866  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||| |||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  19830865 ttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttag 19830804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 32004612 - 32004774
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| ||| |||||||||||||||||    
T  32004612 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcattttt 32004711  T
Q  165 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagtttta 226  Q
    ||||||||||||| |||||| || ||||| |  ||||| |||| |||||||||||||||||||    
T  32004712 gttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 67 - 226
Target Start/End: Original strand, 35288903 - 35289063
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 35289002  T
Q  167 tgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagtttta 226  Q
    |||||||||||||||||  |  ||||| |  ||||| ||||||||||||||||||||||||    
T  35289003 tgcatttttcgtcctacttcatattttcaaactccagaaacacagagaaatgacagtttta 35289063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 34533789 - 34533952
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||| |||  ||||||||||||||||    
T  34533789 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcattttt 34533888  T
Q  165 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||| ||||||||| || ||||| |  |||||||||| ||||||||||||| ||||||    
T  34533889 gttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttag 34533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 61 - 206
Target Start/End: Original strand, 38160945 - 38161090
Alignment:
Q  61 tatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcat 160  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |  || |||||||||||||||||||||||  || |||||||||| ||    
T  38160945 tatttaggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattat 38161044  T
Q  161 ttttgttgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  38161045 ttttgttgcatttttcgtcctactccccattttatcctccaaaaac 38161090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 65 - 205
Target Start/End: Original strand, 28583437 - 28583577
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    ||||||||||||||||||||||||||||||||||||||||||| || | ||||  ||||||||||||||| || ||||| || |||||||||||||||||    
T  28583437 taggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcattttt 28583536  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaa 205  Q
     |||||||||||||||||||||||||||||| |||||||||    
T  28583537 attgcatttttcgtcctaccccccattttatcctccaaaaa 28583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 23952727 - 23952848
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcc-tactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  23952727 ttaggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 23952826  T
Q  163 ttgttgcatttttcgtcctacc 184  Q
    | ||||||||||||||||||||    
T  23952827 tggttgcatttttcgtcctacc 23952848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 80 - 193
Target Start/End: Original strand, 29099863 - 29099976
Alignment:
Q  80 ttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcatttttcgtc 179  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  180 ctaccccccatttt 193  Q
    ||||| || |||||    
T  29099963 ctacctcctatttt 29099976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 28584466 - 28584328
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgtt 167  Q
    |||||||||||||||| ||||||||| ||||||||| |||||||| ||||| || ||||||||||||||||||||  || ||||||||||||||||||||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  168 gcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    | |||||||||| ||||||||||||||| ||||||||||    
T  28584366 gtatttttcgtcttaccccccattttatcctccaaaaac 28584328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 70 - 227
Target Start/End: Complemental strand, 4641983 - 4641828
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  170 atttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    || |||||||||||  || ||||| |  ||| | |||| ||||||||||||||||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttag 4641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 49064033 - 49064109
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaa 142  Q
    ||||||||||||||||||||||||||| ||||| ||  ||||||||| |||| |||||  ||| ||| |||||||||    
T  49064033 aggcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaa 49064109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 35579344 - 35579256
Alignment:
Q  155 tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||| ||| ||||| |||| ||| |||| || |||||   ||| |||||| ||| ||||| ||||||||||||||||||||||||||    
T  35579344 tatcatgttttttgcagttttagtcatacctcctattttcaactctaaaaacgcagggaaataacagttttagacctaccccctatgct 35579256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 32427432 - 32427397
Alignment:
Q  201 aaaaacacagagaaatgacagttttagacctacccc 236  Q
    |||||| |||||||||||||||||||||||||||||    
T  32427432 aaaaacgcagagaaatgacagttttagacctacccc 32427397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 35579028 - 35579074
Alignment:
Q  197 ctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||| |||| ||||||||||||| ||||||||||| ||||||||||    
T  35579028 ctccagaaacgcagagaaatgacatttttagacctatcccctatgct 35579074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 39137080 - 39137014
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcc-cttttaaa 131  Q
    ||||||||||||||||||| ||||||| ||||| ||  ||||||||| ||||| |||| ||||||||    
T  39137080 aggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaa 39137014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 787334 - 787281
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    |||| ||||||||||||||||| ||||| ||||| || |||||||||| |||||    
T  787334 taggtttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtc 787281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 9393738 - 9393894
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    |||||||||||||||| ||||||  |||||  |  ||||||||| | ||||||||  ||| |||  ||||||||| || ||  || |||||| ||| |||    
T  9393738 cttaattacacttttgatcctcgcattttgatcagctcacgaaaattgtcttgcctctttcaaatcgaacaaaaccgtccta-aactatcatgttttttg 9393836  T
Q  169 catttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagtttta 226  Q
    |  |||| |||||||| || |||||   ||||| |||||||| |||||||||||||||    
T  9393837 ctgttttagtcctacctcctattttcaactccagaaacacagtgaaatgacagtttta 9393894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 9394144 - 9394108
Alignment:
Q  200 caaaaacacagagaaatgacagttttagacctacccc 236  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  9394144 caaaaacacaaagaaatgacagttttagacttacccc 9394108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 34595319 - 34595267
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    |||||||||||||||||||||||||   ||||| || |||||||||| |||||    
T  34595319 aggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtc 34595267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 48247582 - 48247638
Alignment:
Q  62 atttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    |||||||||||||||||||||||||||| |  |||||  | |||||||||| |||||    
T  48247582 atttaggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtc 48247638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 167; Significance: 1e-89; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 57 - 243
Target Start/End: Complemental strand, 11277137 - 11276951
Alignment:
Q  57 attttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaatta 156  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11277137 attttattttggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaatta 11277038  T
Q  157 tcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  11277037 tcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttagacctaccccctatgct 11276951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 67 - 243
Target Start/End: Complemental strand, 10900475 - 10900299
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  10900475 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 10900376  T
Q  167 tgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10900375 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 10900299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 65 - 243
Target Start/End: Original strand, 20741098 - 20741276
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| ||||||||||    
T  20741098 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcattttt 20741197  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20741198 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 20741276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 65 - 243
Target Start/End: Original strand, 18257135 - 18257313
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  18257135 taggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18257234  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  18257235 gttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 18257313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 66 - 243
Target Start/End: Complemental strand, 15828187 - 15828010
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||| ||||||||||||||||||    
T  15828187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttg 15828088  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  15828087 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 15828010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 63 - 243
Target Start/End: Original strand, 11444983 - 11445163
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||| |||| ||| |||||||||||||||    
T  11444983 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcattt 11445082  T
Q  163 ttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11445083 ttgttgcatttttcgtcctaccctccattttattctctaaaaacacagagaaatgacagttttagacctaccccctatgct 11445163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 65 - 241
Target Start/End: Complemental strand, 12935704 - 12935528
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| || ||||||||||||||||||| |||||||||||||||||    
T  12935704 taggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcattttt 12935605  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatg 241  Q
    ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12935604 gttacatttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttagacctaccccctatg 12935528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 57 - 243
Target Start/End: Original strand, 28472627 - 28472812
Alignment:
Q  57 attttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||| |||||||||||||||||| |||  ||||||||    
T  28472627 attttatttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaatta 28472726  T
Q  157 tcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28472727 tcatttttgttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 28472812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 57 - 243
Target Start/End: Original strand, 29859816 - 29860001
Alignment:
Q  57 attttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||| |||||||||||||||||| |||  ||||||||    
T  29859816 attttatttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaatta 29859915  T
Q  157 tcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29859916 tcatttttgttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29860001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 63 - 243
Target Start/End: Complemental strand, 31470865 - 31470685
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||| |||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||    
T  31470865 tttatgcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcattt 31470766  T
Q  163 ttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||||||    
T  31470765 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaattttagatctaccccttatgct 31470685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 67 - 241
Target Start/End: Complemental strand, 1149977 - 1149802
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| ||||||||||||| ||||||||| |||||||||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgt 1149878  T
Q  167 tgcatttttcgtcctaccccccattttattctcca-aaaacacagagaaatgacagttttagacctaccccctatg 241  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  1149877 tgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttagacctaccccctatg 1149802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 64 - 227
Target Start/End: Original strand, 2319669 - 2319832
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  2319669 ttaggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 2319768  T
Q  164 tgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  2319769 tgttgcatttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 2322760 - 2322588
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    |||||||||||||||||| ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  170 atttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  2322660 atttttcgtcctacccctcattttattctcc-aaaacacagagaaatgacagttttagaccttccccctatgct 2322588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 64 - 227
Target Start/End: Original strand, 12935154 - 12935318
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  12935154 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 12935253  T
Q  164 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  12935254 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 10899942 - 10900109
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  170 atttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttagacctacccc 236  Q
    ||||||||||||||| || ||||| |  ||||| |||| |||||||||||||||||||||||||||||    
T  10900042 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 10900109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 68 - 243
Target Start/End: Complemental strand, 18505463 - 18505288
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgtt 167  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||| || ||||||||||||||| |||||||| || ||||||||||||||||||||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgtt 18505364  T
Q  168 gcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||| | ||| ||||||||||    
T  18505363 gcatttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagttttaaatctaacccctatgct 18505288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 53 - 227
Target Start/End: Complemental strand, 22219912 - 22219737
Alignment:
Q  53 tttgattttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttca 152  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  22219912 tttgatttggtttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttca 22219813  T
Q  153 attatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||||||||||| ||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  22219812 attatcatttttgttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttag 22219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 65 - 227
Target Start/End: Complemental strand, 23075675 - 23075512
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  23075675 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 23075576  T
Q  165 gttgcatttttcgtcctacccccca-ttttattctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||| ||||| || | |||||  |||||||||  ||||||||||||||||||||    
T  23075575 gttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 62 - 227
Target Start/End: Complemental strand, 11445537 - 11445371
Alignment:
Q  62 atttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatt 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||    
T  11445537 atttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatt 11445438  T
Q  162 tttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||||||| || ||||| |  ||| | |||| ||||||||||||||||||||    
T  11445437 tttgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 66 - 243
Target Start/End: Original strand, 23073998 - 23074164
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||            
T  23073998 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattat-------- 23074089  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
       |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||  |||||||    
T  23074090 ---catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccttctatgct 23074164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 67 - 230
Target Start/End: Original strand, 4811372 - 4811535
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    ||||||||||||||||||||||  || |||||| |||||||||||||||||| ||||||||||||| |||| |||||||| |||||||||||||||||||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 4811471  T
Q  167 tgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacc 230  Q
    | ||||||||||| |||||||||||||||||| ||||||| |||| |||| |||||||||||||    
T  4811472 ttcatttttcgtcttaccccccattttattcttcaaaaacgcagataaataacagttttagacc 4811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 18504922 - 18505045
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  170 atttttcgtcctaccccccatttt 193  Q
    ||||||||||||||| || |||||    
T  18505022 atttttcgtcctacctcctatttt 18505045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 31470314 - 31470476
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||  ||||||||| |||||||    
T  31470314 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttg 31470413  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||| || ||||| |  ||||| |||| |||||||||| |||||||||    
T  31470414 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 31470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 20741650 - 20741485
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcat---tt 162  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||   ||    
T  20741650 aggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttt 20741551  T
Q  163 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    || ||||||||||||||||||| || ||||| |  ||||| |||| ||||||||||||| ||||||    
T  20741550 tttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttag 20741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 18257682 - 18257565
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 18257583  T
Q  167 tgcatttttcgtcctacc 184  Q
    | ||||||||||||||||    
T  18257582 tacatttttcgtcctacc 18257565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 66 - 236
Target Start/End: Original strand, 11276589 - 11276760
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||| ||| |||| |||||||||| ||||||| ||||||| || | ||||||||||||||||||||| ||| |||||||| |||||||||    
T  11276589 aggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttg 11276688  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttagacctacccc 236  Q
    || |||||||||||||||| || ||||| |  |||||||||| |||||||||||||||||||| ||||||||    
T  11276689 tttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcctacccc 11276760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 69 - 206
Target Start/End: Original strand, 29033436 - 29033574
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| ||||| |||||||||||||||||||||||| || ||||| |||||||||||||||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttg 29033535  T
Q  169 catttttcgtcctaccccccattttatt-ctccaaaaac 206  Q
    ||  |||| |||||||||||||||| || ||||||||||    
T  29033536 cacatttcatcctaccccccatttttttcctccaaaaac 29033574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 57 - 206
Target Start/End: Original strand, 18296135 - 18296283
Alignment:
Q  57 attttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaatta 156  Q
    ||||| |||||||||||||| | |||| |||||||||||||| | ||||||| ||| || | ||||||||||||||||||||||||| || ||||| |||    
T  18296135 attttttttaggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcattta 18296234  T
Q  157 tcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  18296235 tcatttttgttgcatttttcgtccta-cccccattttatcctccaaaaac 18296283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 70 - 203
Target Start/End: Complemental strand, 3835268 - 3835135
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    |||||||||||||||||||  |||||||| ||||||||||||| ||||| ||||  |||||||||||||||||  || ||| ||||||||||||||| ||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtggc 3835169  T
Q  170 atttttcgtcctaccccccattttattctccaaa 203  Q
    |||||||||||||||||||||||||| |||||||    
T  3835168 atttttcgtcctaccccccattttatcctccaaa 3835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 69 - 206
Target Start/End: Complemental strand, 29035180 - 29035043
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||  || ||| | |||||||||||||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  169 catttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||||||||||| |||| ||||||| | ||||||||||    
T  29035080 catttttcgtcccaccctccattttttcctccaaaaac 29035043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 15827639 - 15827766
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaa--acggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||  || |||||||||||| ||||||  ||||| |||||| |||||||||||    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttg 15827738  T
Q  166 ttgcatttttcgtcctaccccccatttt 193  Q
    ||||||||||||||||||| || |||||    
T  15827739 ttgcatttttcgtcctacctcctatttt 15827766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 67 - 193
Target Start/End: Complemental strand, 4811801 - 4811675
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||||| || |||  |||||||||||||||||||||| |||||||||||||||||||    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgt 4811702  T
Q  167 tgcatttttcgtcctaccccccatttt 193  Q
    |||||||||| || |||| || |||||    
T  4811701 tgcatttttcatcatacctcctatttt 4811675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 65 - 155
Target Start/End: Original strand, 1149463 - 1149553
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaatt 155  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  1149463 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 242
Target Start/End: Complemental strand, 35163639 - 35163557
Alignment:
Q  160 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgc 242  Q
    ||||| ||||| |||| |||||||| || |||||   ||||||||||||||||||||||||||||||| ||||||||||||||    
T  35163639 ttttttttgcagttttagtcctacctcctattttcaactccaaaaacacagagaaatgacagttttaggcctaccccctatgc 35163557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 22534270 - 22534214
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcc 123  Q
    |||||||||||||||||||||||||| ||||| || |||||||||| ||||| ||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 5121019 - 5120970
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaa 112  Q
    ||||||||||||||||||||||||||| |  ||||| || ||||||||||    
T  5121019 tttaggcttaattacacttttggtccttgcattttgaccaactcacgaaa 5120970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 164; Significance: 9e-88; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 64 - 243
Target Start/End: Original strand, 4790 - 4969
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  4790 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 4889  T
Q  164 tgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  4890 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 4969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 69 - 181
Target Start/End: Complemental strand, 5334 - 5222
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||  ||||||||||||||||||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  169 catttttcgtcct 181  Q
    |||||||||||||    
T  5234 catttttcgtcct 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 162; Significance: 1e-86; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 66 - 243
Target Start/End: Complemental strand, 50970824 - 50970647
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  50970824 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 50970725  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50970724 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 50970647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 66 - 243
Target Start/End: Original strand, 29869619 - 29869796
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  29869619 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttg 29869718  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29869719 ttgcatttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29869796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 65 - 243
Target Start/End: Original strand, 18984117 - 18984295
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  18984117 taggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18984216  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||    
T  18984217 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatgct 18984295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 15173099 - 15173272
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||  |||||||||||||||||||||||||||||||||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgc 15173198  T
Q  170 atttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15173199 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15173272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 66 - 236
Target Start/End: Complemental strand, 5540364 - 5540194
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||| ||||||||||||||||||    
T  5540364 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttg 5540265  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctacccc 236  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5540264 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 5540194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 67 - 236
Target Start/End: Original strand, 29306953 - 29307122
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307052  T
Q  167 tgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctacccc 236  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29307053 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 29307122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 66 - 236
Target Start/End: Complemental strand, 15646741 - 15646571
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||| ||||||||||||||||||    
T  15646741 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 15646642  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctacccc 236  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  15646641 ttgcatttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 15646571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 33144462 - 33144288
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||  |||||| ||||||||||||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttg 33144363  T
Q  169 catttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  33144362 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33144288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 5963120 - 5962947
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| ||  |||||||||||||||||||||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgttgc 5963021  T
Q  170 atttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5963020 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5962947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 67 - 243
Target Start/End: Complemental strand, 21856588 - 21856412
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| || |||| |||||||||||||||||||||| |||||| |||||||||||     
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgc 21856489  T
Q  167 tgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21856488 tgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 21856412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 60 - 243
Target Start/End: Complemental strand, 8679093 - 8678911
Alignment:
Q  60 ttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatca 159  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||  |||||||||||    
T  8679093 ttattttggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatca 8678994  T
Q  160 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||| || |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  8678993 tttttgttgcatttttcgtccta-cctccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8678911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 60 - 243
Target Start/End: Original strand, 17433209 - 17433392
Alignment:
Q  60 ttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatca 159  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||| |||||||  | ||||||||||||||||||||||||||| |||||| |||||    
T  17433209 ttattttggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatca 17433308  T
Q  160 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  17433309 tttttgttgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 17433392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 63 - 243
Target Start/End: Original strand, 9018969 - 9019149
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||  ||||| ||||||||    
T  9018969 tttaggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcattt 9019068  T
Q  163 ttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| | | ||||||| ||||||||||||||    
T  9019069 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaattatatttttagatctaccccctatgct 9019149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 39154021 - 39154195
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    ||||||||||||||||||| || ||||||||| |||||||||||||| || ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  169 catttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||| | ||||||||||    
T  39154121 catttttcgtcctaccccccattctattctccaaaaacgcatagaaatgacagttttagacccatcccctatgct 39154195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 65 - 241
Target Start/End: Complemental strand, 26859606 - 26859431
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||  || ||||||||||||||||||||| ||||| |||||||||||||||||    
T  26859606 taggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcattttt 26859507  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatg 241  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||| | ||||||||||||||| ||||||    
T  26859506 gttgcatttttcgtcctacccccca-tttattctccaaaaacgcagagaaataatagttttagacctacctcctatg 26859431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 67 - 236
Target Start/End: Complemental strand, 29307487 - 29307317
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307388  T
Q  167 tgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttagacctacccc 236  Q
    |||||||||||||||||| || ||||| |  ||||| |||| |||||||||||||||||||||||||||||    
T  29307387 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 29307317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 17433758 - 17433597
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17433659  T
Q  169 catttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttagac 229  Q
    |||||||||||||||| || ||||| |  || || |||| ||||||||||||||||||||||    
T  17433658 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 17433597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 18984665 - 18984503
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  18984665 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18984566  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||| || ||||| |  ||| | ||||||||||||||| |||||||||    
T  18984565 ttgcatttttcgtcctacctcctattttcaaactctagaaacacagagaaatggcagttttag 18984503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 65 - 225
Target Start/End: Original strand, 50970276 - 50970437
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||| |||||||||||||||||    
T  50970276 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcattttt 50970375  T
Q  165 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagtttt 225  Q
    ||||||||||||||||||||  | ||||| |  ||||| |||| ||||||||||||||||||    
T  50970376 gttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 15646190 - 15646353
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||    
T  15646190 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcattttt 15646289  T
Q  165 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||||| |  ||||| |  ||||| |||  ||||||||||||||||||||    
T  15646290 gttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttag 15646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 63 - 227
Target Start/End: Original strand, 21856038 - 21856203
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  21856038 tttagacttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 21856137  T
Q  163 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||| ||||| | || ||||| |  ||||| |||| ||||||||||||||||||||    
T  21856138 ttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 29870164 - 29870003
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||    
T  29870164 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 29870065  T
Q  167 tgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||| || ||||| |  ||  | |||| ||||||||||||||||||||    
T  29870064 tgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttag 29870003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 68 - 227
Target Start/End: Original strand, 5539817 - 5539977
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgtt 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5539916  T
Q  168 gcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    | ||||||||||||||| || ||||| |  ||||| |||| || ||||||| |||||||||    
T  5539917 gtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttag 5539977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 8678542 - 8678658
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgtt 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgtt 8678641  T
Q  168 gcatttttcgtcctacc 184  Q
    |||||||||||||||||    
T  8678642 gcatttttcgtcctacc 8678658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 4636515 - 4636356
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgtt 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| | ||||||||||||||||||||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgtt 4636416  T
Q  168 gcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagtttta 226  Q
    ||||||||||||| ||| || ||||| |  ||||| |||| ||||||||||||| |||||    
T  4636415 gcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaatttta 4636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 65 - 227
Target Start/End: Complemental strand, 15173640 - 15173478
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||| ||| |||||||||||||||||    
T  15173640 taggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcattttt 15173542  T
Q  165 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||||| || ||||| |  ||| | |||| ||||||||||||||||||||    
T  15173541 gttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 63 - 236
Target Start/End: Complemental strand, 9019512 - 9019338
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||  |||| ||||||||||||||||||||||  ||||||||||||||    
T  9019512 tttaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcattt 9019413  T
Q  163 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttagacctacccc 236  Q
    |||||||||||||||||||||| || ||||| |  | ||| |||| ||||||||| |||||||||||||| ||||    
T  9019412 ttgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagacctgcccc 9019338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 39154566 - 39154404
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| ||| ||||||||||||||||||    
T  39154566 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttg 39154467  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||| || ||||| |  || || |||| ||||||||||||| ||||||    
T  39154466 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttag 39154404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 75 - 227
Target Start/End: Original strand, 33143925 - 33144078
Alignment:
Q  75 tacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcatttt 174  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  175 tcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||| || ||||| |  ||| | |||| ||||||||||||||||||||    
T  33144025 tcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 33144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 26859059 - 26859176
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||    
T  26859059 ggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 26859158  T
Q  167 tgcatttttcgtcctacc 184  Q
    ||||||||||||||||||    
T  26859159 tgcatttttcgtcctacc 26859176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 66 - 206
Target Start/End: Original strand, 52268289 - 52268429
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||| ||||| |||||||||||||||||||||||| ||  |||| ||||||||||||    
T  52268289 aggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttg 52268388  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    ||||| |||||||||||||||||||||| | ||||||||||    
T  52268389 ttgcacttttcgtcctaccccccattttttcctccaaaaac 52268429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 68 - 227
Target Start/End: Original strand, 5962579 - 5962739
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgtt 167  Q
    ||||||||||| |||||||||||||||| ||| ||| ||||||||||||||  ||||||||||||||||||||||||||  ||||| |||||||||||||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  168 gcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||| ||||| || ||||| |  ||||| |||||||||| ||||||||||||||    
T  5962679 gcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttag 5962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 241
Target Start/End: Original strand, 4636033 - 4636146
Alignment:
Q  127 ttaaaacagaacaaaacggttcttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagtttta 226  Q
    ||||||||||||||| |||| |||||| ||||||||||||||||||||| || ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagtttta 4636131  T
Q  227 gacctaccccctatg 241  Q
    |||||||||||||||    
T  4636132 gacctaccccctatg 4636146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 2733506 - 2733416
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaa 153  Q
    |||||||||||||| |||||||||||| ||||||||||||| || ||||| ||||| ||||||||||||||||||||||||||| ||||||    
T  2733506 tttaggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 183
Target Start/End: Complemental strand, 52269291 - 52269177
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    |||||||||||||||||||||||||||||| | |||||| ||||  |||  |||||||||||||||||||||||  ||  |||| |||||||||||||||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  169 catttttcgtcctac 183  Q
    || ||||||||||||    
T  52269191 cacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 227
Target Start/End: Original strand, 17112282 - 17112442
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||||| ||| |||||||  ||||||| |||| ||||   |||||||||||| |||| ||||  || ||||||||||||||||| |    
T  17112282 ggcttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcatttttat 17112380  T
Q  167 tgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||| || ||||| |  ||||| |||| |||| |||||| ||||||||    
T  17112381 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttag 17112442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaa 142  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||| | |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 47827137 - 47827033
Alignment:
Q  62 atttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatt 161  Q
    |||| |||||||| ||||||||| ||  | ||||||||||||||||||||| ||||| |||||||||||||||||||||||  || ||| ||||||||||    
T  47827137 attttggcttaat-acacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatt 47827039  T
Q  162 tttgtt 167  Q
    ||||||    
T  47827038 tttgtt 47827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 44802727 - 44802555
Alignment:
Q  57 attttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaatta 156  Q
    ||||| ||||||||||||||||||||||||||| |  ||||| ||  ||||||||| ||||| ||||  ||| |||| ||||||||  || | | || ||    
T  44802727 attttttttaggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaacta 44802628  T
Q  157 tcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagac 229  Q
    |||| ||| ||||| |||| || ||||| || |||||   ||||| ||||||||| |||||||| ||||||||    
T  44802627 tcatgttttttgcagttttagttctacctcctattttcaactccagaaacacagaaaaatgacaattttagac 44802555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 39485200 - 39485240
Alignment:
Q  203 aaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  39485200 aaacacagagagatgacagttttagacctaccccatatgct 39485240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 146
Target Start/End: Complemental strand, 50419806 - 50419727
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggt 146  Q
    ||||||||| ||||||||||| |||  ||| | || |||||||||| ||||| |||| ||||||||  ||||||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggt 50419727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 17088550 - 17088516
Alignment:
Q  203 aaacacagagaaatgacagttttagacctaccccc 237  Q
    |||| ||||||||||||||||||||||||||||||    
T  17088550 aaacgcagagaaatgacagttttagacctaccccc 17088516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 50304441 - 50304490
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    |||||||||||||||||||||||  ||||| || |||||||||| |||||    
T  50304441 cttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtc 50304490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 17641912 - 17641864
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    ||||||||||||||||||||||  ||||| || |||||||||| |||||    
T  17641912 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtc 17641864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 29438929 - 29438981
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    |||||||||||||||||||||||| |  ||||| || |||||||||| |||||    
T  29438929 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtc 29438981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 161; Significance: 6e-86; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 63 - 243
Target Start/End: Complemental strand, 18183518 - 18183338
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  18183518 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 18183419  T
Q  163 ttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  18183418 ttgttgcatttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 18183338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 65 - 243
Target Start/End: Complemental strand, 2865302 - 2865124
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  2865302 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 2865203  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  2865202 gtttcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 2865124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 67 - 243
Target Start/End: Complemental strand, 5819474 - 5819298
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 5819375  T
Q  167 tgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||    
T  5819374 tgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagatctaccccctatgct 5819298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 67 - 243
Target Start/End: Original strand, 8647438 - 8647614
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||| |||||||||||||||||||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgt 8647537  T
Q  167 tgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  8647538 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 8647614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 67 - 243
Target Start/End: Original strand, 19359136 - 19359312
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 19359235  T
Q  167 tgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  19359236 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttctagacctaccccctatgct 19359312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 15708966 - 15709146
Alignment:
Q  62 atttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatt 161  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||    
T  15708966 atttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatt 15709065  T
Q  162 tttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15709066 tttgttgcatatttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15709146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 65 - 243
Target Start/End: Complemental strand, 24362383 - 24362205
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||| ||||||||||    
T  24362383 taggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcattttt 24362284  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||    
T  24362283 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacttatcccctatgct 24362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 65 - 243
Target Start/End: Original strand, 8460928 - 8461106
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  8460928 taggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 8461027  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  8461028 gttgcatttttcgtcataccccccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8461106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 243
Target Start/End: Complemental strand, 29455288 - 29455111
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  29455288 aggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 29455189  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||| | ||||||    
T  29455188 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacatacctcatatgct 29455111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 63 - 243
Target Start/End: Complemental strand, 164740 - 164560
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||||||||||| | ||||| ||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  164740 tttaggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattt 164641  T
Q  163 ttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  164640 ttgttgcattttttgtcctaccccccattttattctccaaaaatgtagagaaatgacagttttagacctaccccctatgct 164560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 64 - 239
Target Start/End: Complemental strand, 14215791 - 14215616
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||| |||||| |||||||||    
T  14215791 ttaggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttt 14215692  T
Q  164 tgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctacccccta 239  Q
    |||||||||||||||| || |||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  14215691 tgttgcatttttcgtcttaacccccattttattctccaaaaacgtagagaaatgacagttttagacctacccccta 14215616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 63 - 243
Target Start/End: Complemental strand, 15372422 - 15372242
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  15372422 tttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattt 15372323  T
Q  163 ttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||| || ||||  ||||||||||| ||||||||| ||||||||||||||||||||||||||| | ||||||    
T  15372322 ttgttgcattttttgttctacatcccattttattttccaaaaacgcagagaaatgacagttttagacctacctcttatgct 15372242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 65 - 232
Target Start/End: Complemental strand, 14464067 - 14463901
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  | ||| |||||||||| ||||||||||| | |||||||||||||||||    
T  14464067 taggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttt 14463968  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagaccta 232  Q
     ||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||    
T  14463967 attgcatttttcgtccta-ccccaattttattctccaaaaacgcagagaaatgacagttttagaccta 14463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 18182968 - 18183131
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  18182968 taggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18183067  T
Q  165 gttgcatttttcgtcctacccccca-ttttattctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||||| || | |||||| | ||| |||| ||||||||||||||||||||    
T  18183068 gttgcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 63 - 227
Target Start/End: Complemental strand, 8647987 - 8647822
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||    
T  8647987 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 8647888  T
Q  163 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||| ||||  | ||||| |  ||||| |||| ||||||||||||||||||||    
T  8647887 ttgttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 66 - 243
Target Start/End: Original strand, 16018588 - 16018763
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| || || ||||||||||||| ||||||||||||| |||||||||| ||||||     
T  16018588 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-attttta 16018686  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||| ||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||    
T  16018687 ttgcattttccgtccta-cccccattttattctccaaaaatatagaaaaatgacagttttagacctaccccctatgct 16018763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 5818927 - 5819090
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  5818927 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 5819026  T
Q  165 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||| |||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  5819027 gttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 65 - 227
Target Start/End: Complemental strand, 19359683 - 19359520
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  19359683 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19359584  T
Q  165 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||| ||||||||||||||| || ||||| |  ||||| ||||  ||||||||| |||||||||    
T  19359583 gttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttag 19359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 73 - 227
Target Start/End: Original strand, 24361843 - 24361997
Alignment:
Q  73 attacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcatt 172  Q
    |||||||||||||||| | ||||||||||||| |||||||||| || ||||||| ||||||||||||||| ||| |||||| ||||||||||||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  173 tttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  24361943 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 69 - 227
Target Start/End: Original strand, 2864756 - 2864915
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    ||||||||||||||||||||| |||||||||||||||||||||| || || ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 2864855  T
Q  169 catttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  2864856 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 8461477 - 8461315
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  8461477 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttg 8461378  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
     ||||||||||||| |||| || ||||| |  ||||| |||| ||||||||||||| ||||||    
T  8461377 ctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttag 8461315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 73 - 227
Target Start/End: Original strand, 24325218 - 24325372
Alignment:
Q  73 attacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcatt 172  Q
    |||||||||||||||| | ||||||||||||| |||||||||| || ||||||| ||||||||||||||| ||| |||||| |||||||||||| |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  173 tttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  24325318 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 24332107 - 24331929
Alignment:
Q  69 cttaattacactttt-ggtcctcgtgttttggcctactcacgaaactggtcttgccctttt-aaaacagaacaaaacggttcttcaattatcattttt-g 165  Q
    ||||||||||||||| |||| || ||||||||| |||||||||||||| || |||| |||| |||||||||||||||||| || |||||||||||||| |    
T  24332107 cttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttg 24332008  T
Q  166 ttgcattttt-cgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  24332007 ttgcattttttcgtcctaccccccattctattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 24331929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 69 - 227
Target Start/End: Original strand, 14215243 - 14215402
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||| ||| ||||| |||||||||||||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  169 catttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  14215343 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 14215402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 63 - 227
Target Start/End: Original strand, 24331555 - 24331722
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatc--at 160  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||   |    
T  24331555 tttaggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctatt 24331654  T
Q  161 ttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||| ||||| | || ||||| |  ||||| |||| ||||||||||||||||||||    
T  24331655 ttttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 25000635 - 25000471
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||||||||||| || ||||||||||||||||||||| ||||| ||  ||||||||||||||||||| |||  |||||||||||||||||    
T  25000635 aggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttg 25000536  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttagac 229  Q
    ||||||||||||||| ||| || ||||| |  |||||||||| ||||||||||||||||||||||    
T  25000535 ttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagac 25000471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 89 - 243
Target Start/End: Original strand, 25000112 - 25000266
Alignment:
Q  89 tcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcatttttcgtcctacccccc 188  Q
    |||||||||||||||||||||||  ||||| |||||| ||||||||||| |||| ||| ||| ||||||||||||| |||||||||| ||||||||||||    
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  189 attttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||  |||||||||||||||||||| ||||| | ||||||    
T  25000212 attttattctccaaaaacgtagagaaatgacagttttagatctacctcatatgct 25000266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 29454739 - 29454901
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||| ||||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  29454739 aggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttttg 29454838  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
     |||||||||||||||||| || ||||| |  ||||| |||| ||||||||||| ||||||||    
T  29454839 ctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 29454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 65 - 229
Target Start/End: Complemental strand, 16019134 - 16018969
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||||||| ||||| ||| ||||||||| |||| |||| |||||||||||||||||||||    
T  16019134 taggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcattttt 16019035  T
Q  165 gttgcatttttcgtcctacccccca-ttttattctccaaaaacacagagaaatgacagttttagac 229  Q
    |||| ||||||||||||||| || | |||||  ||||| |||| ||||||||||||||||||||||    
T  16019034 gttgtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagac 16018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 67 - 226
Target Start/End: Original strand, 164191 - 164350
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| |||||||||||  ||||||||||| ||||||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatca-ttttgt 164289  T
Q  167 tgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagtttta 226  Q
    |||||||||||||||||| || ||||| |  ||||| |||| ||||||||||||| |||||    
T  164290 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 7349562 - 7349423
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||| ||||||||||| ||||||||  | ||||| |||||||||||||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgt 7349463  T
Q  167 tgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||| ||||| |||||||||||||||| | ||||||||||    
T  7349462 tgcacttttcatcctaccccccattttttcctccaaaaac 7349423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 15709513 - 15709353
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||||| ||| |||||||| |||||||||||||||||| ||| | ||||||||| |||    
T  15709513 ggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgt 15709415  T
Q  167 tgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||| || ||||| |  ||||| || | ||||||||||||||||||||    
T  15709414 tgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttag 15709353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 4222266 - 4222147
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgtt 167  Q
    |||||||||||||||||||||||||||||||| || ||||||||| ||||| |||||||||||||||||||||||  ||  |||| ||||||||||| ||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  168 gcatttttcgtcctaccccc 187  Q
    ||||||||||||||||||||    
T  4222166 gcatttttcgtcctaccccc 4222147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 67 - 193
Target Start/End: Original strand, 7348559 - 7348685
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||| ||||||||||| |||||| | |||||||||||| ||||| ||||||||||||||||||||||||  | ||||  |||||||||||||    
T  7348559 ggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgt 7348658  T
Q  167 tgcatttttcgtcctaccccccatttt 193  Q
    |||| ||||||||||||||||||||||    
T  7348659 tgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 69 - 180
Target Start/End: Original strand, 15371873 - 15371983
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    |||||||||||||||| ||||||| |||||| |||||||||||  ||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15371971  T
Q  169 catttttcgtcc 180  Q
    ||||||||||||    
T  15371972 catttttcgtcc 15371983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 73 - 205
Target Start/End: Complemental strand, 6019309 - 6019177
Alignment:
Q  73 attacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcat- 171  Q
    |||||| |||||||| || ||||||||| |||||||||||||| |||||| |||||||||||||||||||| ||  || ||||||||||||||||||||     
T  6019309 attacatttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcatt 6019211  T
Q  172 ttttcgtcctaccccccattttattctccaaaaa 205  Q
    ||||||||||||| |||||||||| |||||||||    
T  6019210 ttttcgtcctacctcccattttatcctccaaaaa 6019177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 4623148 - 4623285
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||| ||||| ||||  |||||||||||||||||  || ||||||||||||||||| |    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttat 4623247  T
Q  167 tgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
     ||||||| |||||||  ||||||||||| ||||||||||    
T  4623248 ggcattttccgtccta--ccccattttatcctccaaaaac 4623285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 4219663 - 4219800
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||| |||||||||||||| ||| | || ||| ||||| |||| |||||||||||||||||   || ||| | |||||||||||||    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgt 4219762  T
Q  167 tgcatttttcgtcctaccccccattttattctccaaaaa 205  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  4219763 tgcatttttcgtccta-cccccattttatcctccaaaaa 4219800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 209
Target Start/End: Original strand, 6018315 - 6018455
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgtt 167  Q
    ||||||||||| ||||||| |||||||||||  |||||||||||||||||| || ||||||||||||||||||||    |||||||||||||||||||||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaa-ttatcttcaattatcatttttgtt 6018413  T
Q  168 gcatttttcgtcctaccccccattttattctccaaaaacaca 209  Q
    ||| |||| ||||||||| | |||||   |||||||||||||    
T  6018414 gcagttttagtcctaccctctattttcacctccaaaaacaca 6018455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 208
Target Start/End: Complemental strand, 4624757 - 4624629
Alignment:
Q  80 ttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcatttttcgtc 179  Q
    |||| |||||||||||||  ||||||||||||| ||||| || |  ||||||||| ||||||||  |  |||||||||||||| ||||||||||||||||    
T  4624757 ttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtc 4624658  T
Q  180 ctaccccccattttattctccaaaaacac 208  Q
    |||||||||||||||| || |||||||||    
T  4624657 ctaccccccattttatccttcaaaaacac 4624629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26606250 - 26606315
Alignment:
Q  1 tatatattcattaaagtgtaaaaacaaatattgaagaaacacattttctatttttgattttattta 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26606250 tatatattcattaaagtgtaaaaacaaatattgaagaaacacattttctattttttattttattta 26606315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 13814224 - 13814134
Alignment:
Q  120 tgcccttttaaaacagaacaaaacggt----tctt-caattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||||||||||| ||||||||||| ||    |||| |||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  13814224 tgcccttttaaatcagaacaaaactgtcatgtctttcaattatcatttttgttgcacttttcgtcctac-ccccattttatcctccaaaaac 13814134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 24325639 - 24325580
Alignment:
Q  184 cccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||| || ||||||||||    
T  24325639 cccccattttattctccagaagtacagagaaatgacagttttagacttatcccctatgct 24325580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 14462686 - 14462730
Alignment:
Q  149 ttcaattatcatttttgttgcatttttcgtcctaccccccatttt 193  Q
    |||||||||||||||||||||||||||||||||||| || |||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctatttt 14462730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 15029857 - 15029780
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaa 142  Q
    ||||||||||||||||||||||||||   ||||| || |||||||||| ||||||| || |||| |||  ||||||||    
T  15029857 taggcttaattacacttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaa 15029780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 32305947 - 32305991
Alignment:
Q  197 ctccaaaaacacagagaaatgacagttttagacctaccccctatg 241  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||||    
T  32305947 ctccagaaacacagagaaatgacagttttagacttacccgctatg 32305991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 41834606 - 41834443
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcat-tttt 164  Q
    ||||||||||||||||||||||||||  ||||| ||  ||||||||| ||||| ||||  ||| | |  ||||||||| | || | || |||||| ||||    
T  41834606 aggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccg-tcctaaactatcatgtttt 41834508  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagac 229  Q
     ||||| |||| |||||||| || |||||   |||   |||| ||||||||||||||||||||||    
T  41834507 tttgcagttttagtcctacctcctattttcaactcttgaaacgcagagaaatgacagttttagac 41834443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 4967323 - 4967264
Alignment:
Q  61 tatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtctt 120  Q
    ||||||||||||||||||||||||||||||   ||||| || |||||| ||| |||||||    
T  4967323 tatttaggcttaattacacttttggtcctcacattttgaccaactcacaaaaatggtctt 4967264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 16752711 - 16752757
Alignment:
Q  197 ctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||| |||| || |||||||| ||||||||||||||||||||||||    
T  16752711 ctccataaacgcaaagaaatgatagttttagacctaccccctatgct 16752757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 159; Significance: 9e-85; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 65 - 243
Target Start/End: Complemental strand, 4754 - 4576
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||    
T  4754 taggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcattttt 4655  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4654 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 4576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 106 - 227
Target Start/End: Original strand, 4242 - 4364
Alignment:
Q  106 cacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaa 204  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||| || ||||| |  ||| ||||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  205 acacagagaaatgacagttttag 227  Q
    |  ||||||||||||||||||||    
T  4342 atgcagagaaatgacagttttag 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 159; Significance: 9e-85; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 61 - 243
Target Start/End: Complemental strand, 19176841 - 19176659
Alignment:
Q  61 tatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcat 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  19176841 tatttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 19176742  T
Q  161 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||    
T  19176741 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttagacctaccacctatgct 19176659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 64 - 243
Target Start/End: Complemental strand, 44831793 - 44831614
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||    
T  44831793 ttaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttt 44831694  T
Q  164 tgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44831693 tgttgcatttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 44831614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 12571858 - 12572040
Alignment:
Q  62 atttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatt 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||  |||||||||||||    
T  12571858 atttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcatt 12571957  T
Q  162 tttgttgcatttttcgtcct-accccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12571958 tttgttgcatttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 12572040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 65 - 240
Target Start/End: Original strand, 41681132 - 41681306
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  41681132 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 41681231  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctat 240  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||    
T  41681232 gttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttaaacataccccctat 41681306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 63 - 241
Target Start/End: Original strand, 11656451 - 11656630
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||| |||||    
T  11656451 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccattt 11656550  T
Q  163 ttgttgcatttttcgtcctaccccccattttattctcc-aaaaacacagagaaatgacagttttagacctaccccctatg 241  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||| ||||    
T  11656551 ttgttgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatggcagttttagacctaccccttatg 11656630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 243
Target Start/End: Complemental strand, 9930203 - 9930026
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||| ||| |||||| |||||||||||    
T  9930203 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttg 9930104  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||    
T  9930103 ttgcatttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttagacctaccccctatgct 9930026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 13224636 - 13224816
Alignment:
Q  62 atttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatt 161  Q
    |||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||||||||||||    
T  13224636 attttggcataattacacttttggtcttcgtgttttggcctactcacgaaactggtct-gcccttttaaaacagaacaaaacaatccttcaattatcatt 13224734  T
Q  162 tttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13224735 tttgttgaatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 13224816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 33328161 - 33328334
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 33328260  T
Q  170 atttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  33328261 atttttcgtcctaccctcgattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 33328334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 65 - 243
Target Start/End: Original strand, 31133218 - 31133396
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||| |||||||| || |||||| ||||||||||    
T  31133218 taggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcattttt 31133317  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| | ||||||    
T  31133318 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacctcttatgct 31133396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 67 - 243
Target Start/End: Complemental strand, 9178180 - 9178005
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||| |||||| ||||||||||||    
T  9178180 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgt 9178081  T
Q  167 tgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||| || || |||||||||||||||| |||||| ||||||||||||| ||||||||||||| ||||||||    
T  9178080 tgcatttttcatctta-cccccattttattctcaaaaaacgcagagaaatgacaattttagacctacctcctatgct 9178005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 13225185 - 13225023
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13225185 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 13225086  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||| || ||||| |  ||||| |||| |||||||||| |||||||||    
T  13225085 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 13225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 64 - 227
Target Start/End: Original strand, 19176287 - 19176451
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  19176287 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19176386  T
Q  164 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||| ||| || ||||| |  ||||| |||| ||||||||||||| ||||||    
T  19176387 tgttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttag 19176451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 63 - 227
Target Start/End: Original strand, 33742918 - 33743082
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  33742918 tttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcattt 33743016  T
Q  163 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||| |||||||||||||||||| || ||||| || | ||| |||| ||||||||||||||||||||    
T  33743017 ttgatgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 44831246 - 44831408
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||| |||||||||||||    
T  44831246 aggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttg 44831345  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||| || ||||| |  ||||| |||| ||||||||||| ||||||||    
T  44831346 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 70 - 227
Target Start/End: Original strand, 9928912 - 9929070
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  170 atttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||| ||  |||| |  ||||| |||| |||||||||| |||||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttag 9929070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 11657003 - 11656841
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||| ||| ||||||||||||||||||    
T  11657003 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttg 11656904  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||| || ||||| |  ||||| |||| |||||||||  |||||||||    
T  11656903 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttag 11656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 63 - 193
Target Start/End: Complemental strand, 34541097 - 34540967
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| ||| |||||||||||||||    
T  34541097 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcattt 34540998  T
Q  163 ttgttgcatttttcgtcctaccccccatttt 193  Q
    |||||||||||||||||||||| || |||||    
T  34540997 ttgttgcatttttcgtcctacctcctatttt 34540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 120 - 241
Target Start/End: Complemental strand, 33743411 - 33743290
Alignment:
Q  120 tgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgac 219  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  33743411 tgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataac 33743312  T
Q  220 agttttagacctaccccctatg 241  Q
    |||||||||||||| |||||||    
T  33743311 agttttagacctactccctatg 33743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 41681679 - 41681562
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41681580  T
Q  167 tgcatttttcgtcctacc 184  Q
    ||||||||||||||||||    
T  41681579 tgcatttttcgtcctacc 41681562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 61 - 243
Target Start/End: Complemental strand, 4630337 - 4630161
Alignment:
Q  61 tatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcat 160  Q
    |||||| | ||||||||||||||| || ||||||||||| |||||||||||| ||||| |||  ||||||||||||| | |||||| ||||||||||       
T  4630337 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaattat--- 4630241  T
Q  161 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
       ||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  4630240 ---tgttgcatttttcatcctaccccccattttattctccaaaaacgcagaaaaatgacagttttagacctaccccctatgct 4630161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 31133764 - 31133605
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgtt 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||| |||||||||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtt 31133665  T
Q  168 gcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagtttta 226  Q
    |||||||||||| |||| || ||||| |  ||||| |||  |||||||||||| ||||||    
T  31133664 gcatttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggtttta 31133605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 70 - 227
Target Start/End: Complemental strand, 12572393 - 12572235
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  170 atttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||| || ||||| |  ||||| |||| |||||||||  |||||||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttag 12572235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 69 - 227
Target Start/End: Complemental strand, 33328683 - 33328524
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| ||| ||| ||||||||||| ||||||||||| |||||||||||||||||||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  169 catttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||| ||| |||||||| |  ||||| |||| |||||||||| |||||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttag 33328524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 11337069 - 11336959
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||| |||||  ||||||||||||||||| ||||||||  ||||||||||||||||    
T  11337069 taggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcattttt 11336970  T
Q  165 gttgcattttt 175  Q
    |||||||||||    
T  11336969 gttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 63 - 205
Target Start/End: Original strand, 10918122 - 10918264
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||| ||||||||| |||| ||||||||||||||  |||||||||||| ||||||||||   |||||||||| |||||  || |||||| ||||||||    
T  10918122 tttaggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcattt 10918221  T
Q  163 ttgttgcatttttcgtcctaccccccattttattctccaaaaa 205  Q
    |||||||||||||| || ||||||||||||||| |||||||||    
T  10918222 ttgttgcatttttcatcataccccccattttatcctccaaaaa 10918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 65 - 221
Target Start/End: Original strand, 4629795 - 4629952
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    ||||||||||| |||||||  | ||||||||||||| || |||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||||    
T  4629795 taggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcattttt 4629894  T
Q  165 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacag 221  Q
     |||||||||||||| |||| || ||||| |  ||||| |||| || |||||||||||    
T  4629895 attgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 8074097 - 8073958
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||| ||| |||||||||||||||||||||||||| |||||||| || || || ||||||||||||||||||||   | |||||||||||| |||||    
T  8074097 aggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-ttttg 8073999  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    ||||||||| ||||  | |||||||||||  ||||||||||    
T  8073998 ttgcattttacgtcaaaacccccattttaccctccaaaaac 8073958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 43958266 - 43958324
Alignment:
Q  148 cttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  43958266 cttcaattatcatttttgttgcatttttcgtcctaccctctattttattctccaaaaac 43958324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 18805292 - 18805337
Alignment:
Q  197 ctccaaaaacacagagaaatgacagttttagacctaccccctatgc 242  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||    
T  18805292 ctccagaaacacagagaaatgacagttttagacttaccccctatgc 18805337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 100
Target Start/End: Original strand, 9177665 - 9177700
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggc 100  Q
    ||||||||||||||||||||||||||||||||||||    
T  9177665 taggcttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 10919732 - 10919691
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactca 107  Q
    ||||||||||| ||||||||||||||||||||| ||||||||    
T  10919732 aggcttaattatacttttggtcctcgtgttttgacctactca 10919691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 35427361 - 35427308
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggt 117  Q
    ||||||||||||||||||||||||||||  ||||| || |||||||||| ||||    
T  35427361 ttaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggt 35427308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 43958203 - 43958254
Alignment:
Q  61 tatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaa 112  Q
    ||||||| |||||||| |||||||||| ||||||||||  ||||||||||||    
T  43958203 tatttagacttaattatacttttggtcttcgtgttttgatctactcacgaaa 43958254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 15255850 - 15255904
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    |||||||||||||||||||||||||| |  ||||| || |||||||||| |||||    
T  15255850 ttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtc 15255904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 9177724 - 9177793
Alignment:
Q  159 atttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||| ||| ||| |||||||| |  ||||| ||||  |||||||||||||||||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttag 9177793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 89
Target Start/End: Original strand, 5730811 - 5730839
Alignment:
Q  61 tatttaggcttaattacacttttggtcct 89  Q
    |||||||||||||||||||||||||||||    
T  5730811 tatttaggcttaattacacttttggtcct 5730839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 67 - 243
Target Start/End: Complemental strand, 39556122 - 39555946
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||| ||    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgt 39556023  T
Q  167 tgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39556022 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 39555946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 65 - 243
Target Start/End: Original strand, 5136978 - 5137156
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  5136978 taggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 5137077  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5137078 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5137156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 65 - 243
Target Start/End: Complemental strand, 31779199 - 31779021
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  31779199 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 31779100  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||    
T  31779099 gttgcatttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttagacgtaccccctatgct 31779021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 52 - 241
Target Start/End: Original strand, 20840545 - 20840734
Alignment:
Q  52 ttttgattttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttc 151  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||| ||||    
T  20840545 ttttgatttttcttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttc 20840644  T
Q  152 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatg 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||    
T  20840645 aattatcatttttgttgcatttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttagacctaccccctatg 20840734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 41046703 - 41046876
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  170 atttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41046803 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 41046876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 63 - 243
Target Start/End: Complemental strand, 24301105 - 24300925
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||| ||||||||||| |||| | ||||||||    
T  24301105 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcattt 24301006  T
Q  163 ttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24301005 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 24300925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 66 - 243
Target Start/End: Original strand, 37726928 - 37727105
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||||||||||||||||||||||| || || |||||||||||  ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  37726928 aggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37727027  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37727028 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37727105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 243
Target Start/End: Original strand, 23644461 - 23644638
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||||||||||||||||| || ||||||||||||||||||    
T  23644461 aggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttg 23644560  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  23644561 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 23644638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 25853770 - 25853596
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    |||||||||||||||| |||||||||||||  ||||||||||||||||||||| | |||||||||||||||||| ||| |||||||||||||||||||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  169 catttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  25853670 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 25853596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 64 - 222
Target Start/End: Original strand, 48452986 - 48453144
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||    
T  48452986 ttaggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttt 48453085  T
Q  164 tgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagt 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  48453086 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 67 - 236
Target Start/End: Original strand, 43973441 - 43973610
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| || |  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  167 tgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctacccc 236  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||    
T  43973541 tgcatttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttagacctacccc 43973610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 22425354 - 22425182
Alignment:
Q  71 taattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgca 170  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  171 tttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| | | ||||||| ||||||||||||||    
T  22425254 tttttcgtcctaccccccattttattctccaaaaacgcagagaaattagatttttagatctaccccctatgct 22425182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 63 - 243
Target Start/End: Original strand, 30104478 - 30104657
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||| || | |||||| |||||||||||||||    
T  30104478 tttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcattt 30104577  T
Q  163 ttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||| ||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||    
T  30104578 ttgttgcatttttcgtccta-cccccattttattatctaaaaacgcagagaaatgacagttttagacctaccccctatgct 30104657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 58 - 241
Target Start/End: Complemental strand, 32535517 - 32535330
Alignment:
Q  58 ttttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattat 157  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  32535517 tttttttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattat 32535418  T
Q  158 c-----atttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatg 241  Q
    |     |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  32535417 cattaaatttttgttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatg 32535330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 243
Target Start/End: Complemental strand, 27394123 - 27393946
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||| |||| |||||||||||||||||||| | ||||||||||||||||||    
T  27394123 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttg 27394024  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||| | |||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  27394023 ttgcattttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttagacctaccccatatgct 27393946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 63 - 243
Target Start/End: Complemental strand, 26837904 - 26837725
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||| |||| |||||||||||||  ||||| ||||||||    
T  26837904 tttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcattt 26837806  T
Q  163 ttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||    
T  26837805 ttgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacttaccccctatgct 26837725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 66 - 243
Target Start/End: Complemental strand, 17465038 - 17464860
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||| ||||||||||||||||||||||||| || |||||||||||  ||||||||||| ||||||||||||| ||||||||||||||||||    
T  17465038 aggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttttg 17464939  T
Q  166 ttgcat-ttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||| |||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  17464938 ttgcatttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacctaacccctatgct 17464860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 26275119 - 26274936
Alignment:
Q  59 tttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatc 158  Q
    |||||||||| ||||||| | |||||| ||| |||||||| ||||||||||||||||||| | |||||||||||||||| |||||||| | |||||||||    
T  26275119 tttatttaggtttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatc 26275020  T
Q  159 atttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  26275019 atttttgttgc-tttttcgtcctaccccccattttattctccaaaaccgcagagaaatgacagttttagacctaccccctatgct 26274936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 63 - 227
Target Start/End: Complemental strand, 43973989 - 43973824
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||    
T  43973989 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcattt 43973890  T
Q  163 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||||||| || ||||| || | ||| |||| ||||||||||||||||||||    
T  43973889 ttgttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 58 - 227
Target Start/End: Complemental strand, 37727484 - 37727314
Alignment:
Q  58 ttttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattat 157  Q
    |||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||    
T  37727484 tttttttttggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattat 37727385  T
Q  158 catttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||||||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  37727384 catttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 65 - 227
Target Start/End: Complemental strand, 4275911 - 4275748
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| |||||||||||||    
T  4275911 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcattttt 4275812  T
Q  165 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||||| || ||||| |  ||||| |||| |||||||||| |||||||||    
T  4275811 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 4275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 20841107 - 20840945
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||    
T  20841107 aggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 20841008  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||| || ||||| |  ||||| |||| |||||||||| |||||||||    
T  20841007 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 20840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 27393660 - 27393822
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||    
T  27393660 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttg 27393759  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||||||| ||||| |  | ||| |||| ||||||||||||||||||||    
T  27393760 ttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 39555577 - 39555739
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||| ||||||||||||||||||    
T  39555577 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttg 39555676  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||| ||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  39555677 ttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 29801967 - 29801798
Alignment:
Q  61 tatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcat 160  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  29801967 tatttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcat 29801868  T
Q  161 ttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttagac 229  Q
    |||||||||||||||||||| ||| || ||||| |  ||||| |||| ||||||||||||| ||||||||    
T  29801867 ttttgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagac 29801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 64 - 227
Target Start/End: Original strand, 17464488 - 17464652
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  17464488 ttaggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 17464587  T
Q  164 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||  | |||||||||||||||||    
T  17464588 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttag 17464652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 30098309 - 30098147
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  30098309 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 30098210  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||| || ||||| |  || || |||| |||||| |||||||||||||    
T  30098209 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttag 30098147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 31778652 - 31778814
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||| ||||  ||||||||||||    
T  31778652 aggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttg 31778751  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  31778752 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 67 - 227
Target Start/End: Original strand, 25853234 - 25853395
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 25853333  T
Q  167 tgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||| ||||| || ||||| |  ||||| |||| ||||||||| ||||||||||    
T  25853334 tgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttag 25853395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 70 - 227
Target Start/End: Original strand, 32534962 - 32535120
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 32535061  T
Q  170 atttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||| || ||||| |  ||| | || ||||||||||||||||||||||    
T  32535062 atttttcgtcctacctcctattttcaaactctagaatcacagagaaatgacagttttag 32535120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 64 - 227
Target Start/End: Complemental strand, 5137529 - 5137365
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||| ||||||||| ||| ||||||||||||||||    
T  5137529 ttaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 5137430  T
Q  164 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||| |||||| | || ||||| |  ||||| |||| ||||||||||||||||||||    
T  5137429 tgttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 70 - 206
Target Start/End: Complemental strand, 25612519 - 25612383
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| |||||||||| ||  || ||||||||||||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  170 atttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||||||||||||||||||||||||| ||||||||||    
T  25612419 atttttcgtcctaccccccattttatcctccaaaaac 25612383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 63 - 227
Target Start/End: Original strand, 22424810 - 22424975
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||||||||||||||||||||| |||||||||  ||||||| |||||||||||  || |||||||||||||||||||||||| |||||||||||||||    
T  22424810 tttaggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcattt 22424909  T
Q  163 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||||||| || ||||| |  ||||| |||  ||||||||||||||||||||    
T  22424910 ttgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 58 - 227
Target Start/End: Complemental strand, 23645019 - 23644849
Alignment:
Q  58 ttttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattat 157  Q
    |||| ||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||  |||||||||    
T  23645019 ttttttttcggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattat 23644920  T
Q  158 catttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||| ||||||| || ||||| |  ||| |  ||| ||||||||||||||||||||    
T  23644919 catttttgttgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttag 23644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 67 - 208
Target Start/End: Complemental strand, 23228552 - 23228412
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||||  || ||||||||||||||||| |    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttat 23228454  T
Q  167 tgcatttttcgtcctaccccccattttattctccaaaaacac 208  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  23228453 tgcatttttcgtcctacctcccattttatcctccaaaaacac 23228412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 29801356 - 29801477
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    ||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 29801455  T
Q  167 tgcatttttcgtcctacccccc 188  Q
    ||||||||||||| ||||||||    
T  29801456 tgcatttttcgtcttacccccc 29801477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 26837358 - 26837521
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||| ||||||||| |||||||||| || ||||||||||||||||||| ||||| |||||||||| |||| ||| ||||||| |||||||||||||||||    
T  26837358 taggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcattttt 26837457  T
Q  165 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  26837458 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 50116954 - 50116815
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||| ||||| ||||||||| ||| |||||||||||||  |||| |||||||||||||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgt 50116855  T
Q  167 tgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||| |||||||||||||||||||||| | ||||||||||    
T  50116854 tgcaattttcgtcctaccccccattttttcctccaaaaac 50116815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 70 - 227
Target Start/End: Original strand, 24300560 - 24300717
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    ||||||||| |||||||| |||||||||||| || |||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||    
T  24300560 ttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgc 24300658  T
Q  170 atttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    | ||||||||| ||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  24300659 aattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttag 24300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 70 - 227
Target Start/End: Original strand, 26274570 - 26274728
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    ||||||||| ||||| |||| || |||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26274669  T
Q  170 atttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||| |||| || ||||| |  ||||| |||| |||  |||||||||||||||    
T  26274670 atttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttag 26274728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 32697244 - 32697107
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgtt 167  Q
    ||||||||| | |||||||||||||||||| |||||||||||||| | |||  ||||||||||||||||||||||  || ||||||||||||||||||||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgtt 32697145  T
Q  168 gcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  32697144 gcatttttcgtcctac-ccccattttatcctccaaaaac 32697107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 206
Target Start/End: Complemental strand, 51474888 - 51474739
Alignment:
Q  58 ttttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattat 157  Q
    |||| |||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||  || ||| | ||||    
T  51474888 ttttttttaggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttat 51474789  T
Q  158 catttttgttgcatttttcgtcctacccccca-ttttattctccaaaaac 206  Q
    |||||||||||||||||||||||||||||| | |||||| ||||||||||    
T  51474788 catttttgttgcatttttcgtcctacccccaatttttatcctccaaaaac 51474739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 65 - 206
Target Start/End: Original strand, 37220555 - 37220696
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | |  | || ||| |||||||||||||| ||||  || ||||| |||||||||||    
T  37220555 taggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcattttt 37220654  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||||| |||||||||||||| ||||||||| ||||||||||    
T  37220655 gttgcacttttcgtcctaccctccattttatcctccaaaaac 37220696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 70 - 227
Target Start/End: Complemental strand, 41047239 - 41047083
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    ||||||||||||| | || || ||||||||||||||||||||||||||  || ||||||||||||||| |||||| | ||||||||||||||||||||||    
T  41047239 ttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttttgttgc 41047142  T
Q  170 atttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||| || ||||| |  ||||| |||| |||||||||| |||||||||    
T  41047141 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 41047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 65 - 205
Target Start/End: Original strand, 45965936 - 45966076
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||  |  || ||| ||||||||||| |||||||  || |||| |||||||||| |    
T  45965936 taggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgt 45966035  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaa 205  Q
    |||||||||||||| ||| |||||||||| | |||||||||    
T  45966036 gttgcatttttcgttctaacccccattttctcctccaaaaa 45966076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 181
Target Start/End: Original strand, 51473429 - 51473542
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgtt 167  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||||||||||  || ||||  ||||||||||||||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgtt 51473528  T
Q  168 gcatttttcgtcct 181  Q
    ||| |||| |||||    
T  51473529 gcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 69 - 205
Target Start/End: Complemental strand, 25420684 - 25420548
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    |||||||||||||||| || |||| ||||| ||||||||||||| || ||  |||||||||||| |||| ||||  || |||||||||| ||||||||||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  169 catttttcgtcctaccccccattttattctccaaaaa 205  Q
    ||||||||||| ||||||||||||||| || ||||||    
T  25420584 catttttcgtcataccccccattttatccttcaaaaa 25420548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 86 - 195
Target Start/End: Complemental strand, 18010271 - 18010162
Alignment:
Q  86 tcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcatttttcgtcctaccc 185  Q
    ||||| |||||| | |||||||||||| ||||   ||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||| |||    
T  18010271 tcctcctgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcctgccc 18010172  T
Q  186 cccattttat 195  Q
     |||||||||    
T  18010171 tccattttat 18010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 65 - 143
Target Start/End: Complemental strand, 37222118 - 37222040
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaac 143  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||| ||||| |||| |||||||||||||||||||    
T  37222118 taggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaac 37222040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 244
Target Start/End: Original strand, 49407789 - 49407972
Alignment:
Q  60 ttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatca 159  Q
    ||||||||||||||||||||||||||||||||  ||||| ||  ||||||||| ||||| ||||  ||| ||| |||||||||| || | | || | | |    
T  49407789 ttatttaggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaact-tta 49407887  T
Q  160 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgcta 244  Q
    | |||  | || |||| ||| |||| || |||||   |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  49407888 tgttttgtacagttttagtcatacctcctattttcaactccaaaaacgcagagaaatgacaattttagacctaccccctatgcta 49407972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 206
Target Start/End: Original strand, 25419140 - 25419283
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttc-ttcaattatca-t 160  Q
    |||| |||| |||| |||||||||| ||||||||| || ||||||||||| | ||  |||||||||||||||||||||||| || | ||||||||||| |    
T  25419140 tttaagcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcatt 25419239  T
Q  161 ttttgttgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||| ||||| |||| |||||  |||||||||||  ||||||||||    
T  25419240 tttttttgcagttttagtccttacccccatttta--ctccaaaaac 25419283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 208
Target Start/End: Original strand, 32695706 - 32695843
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    ||||||||| ||||||||||| | |||||||||||| |||||| || |  || | ||||||||||||||||||  || || | ||||| |||||||||||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgc 32695805  T
Q  170 atttttcgtcctaccccccattttattctccaaaaacac 208  Q
    | |||| |||||  ||| |||||||  ||||||||||||    
T  32695806 aattttagtccttaccctcatttta-cctccaaaaacac 32695843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 206
Target Start/End: Original strand, 23227261 - 23227395
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||| ||||| ||||||||||   |||||||||| ||||||||||| ||||| |       | ||||||||||||   || || ||||| |||||||||    
T  23227261 aggctcaattagacttttggtctctgtgttttggcttactcacgaaaatggtcctc------tgaaacagaacaaatttgtcctccaattttcatttttg 23227354  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||||||||||||||| | ||||||||||| ||||||||||    
T  23227355 ttgcatttttcgtccttctccccattttatcctccaaaaac 23227395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 243
Target Start/End: Original strand, 55192118 - 55192293
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcc-cttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||| |||| ||  ||||| ||  ||||||||| |||||| ||| |||| ||| || |||||||| || | | || ||| || |||     
T  55192118 ggcttaattacacttttagtccccgcattttgaccagctcacgaaaatggtctcgcctctttcaaatca-aacaaaaccgtccataaactat-atgtttt 55192215  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||| | |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||||||||||||||    
T  55192216 ttgtagttttagtcctacctcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 55192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 243
Target Start/End: Complemental strand, 27200240 - 27200062
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    |||||||||||||||||||||||||| |  ||||| ||  ||||||||| ||||  ||||  ||| |||  |||||| || || ||  || |||||| ||    
T  27200240 ttaggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtccta-aactatcatgtt 27200142  T
Q  164 tgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    | ||||| |||| ||| |||| || |||||   ||||| |||| |||||||||||||| |||||||||||||| ||||||    
T  27200141 ttttgcagttttagtcatacctcctattttcaactccagaaacgcagagaaatgacaggtttagacctaccccttatgct 27200062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 243
Target Start/End: Complemental strand, 36701645 - 36701466
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    |||| |||||||||||||||||||||||  ||||| ||  ||||||||| ||||| || |  ||| |||  ||||||||   | | | || |||||| ||    
T  36701645 ttagacttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaactatcatgtt 36701546  T
Q  164 tgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    | ||||| |||| ||| |||| || |||||   ||||| ||||||| ||||||| |||||||||||||||||| ||||||    
T  36701545 ttttgcagttttagtcatacctcctattttcaactccagaaacacatagaaatggcagttttagacctaccccatatgct 36701466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 29801532 - 29801592
Alignment:
Q  183 ccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| |||| | ||||||    
T  29801532 ccccccattttattcttcaaaaatgcagagaaatgacagttttagacatacctcatatgct 29801592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 37075781 - 37075864
Alignment:
Q  160 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||| ||||| |||| |||||||| |  |||||   ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  37075781 ttttttttgcagttttagtcctacctcttattttcaactccagaaacgcagagaaatgaccgttttagacctaccccctatgct 37075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 52375880 - 52375826
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    ||||||||||||||||||||||||||||  ||||| || |||||||||| |||||    
T  52375880 ttaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtc 52375826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 50901078 - 50900898
Alignment:
Q  62 atttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatt 161  Q
    ||||||||||||||||||||||||||||||  ||||| ||  ||||| ||| ||| | ||||  ||  |||  ||||||||| || | | || ||| ||     
T  50901078 atttaggcttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactat-atg 50900980  T
Q  162 tttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||| ||||| |||| |||||||| || |||||   ||||| |||| || ||||||  |||||||||| ||||||||||||||    
T  50900979 ttttttgcagtttttgtcctacctcctattttcaactccataaacgcaaagaaattgcagttttagatctaccccctatgct 50900898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 49952102 - 49952039
Alignment:
Q  57 attttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtctt 120  Q
    ||||||||| |||||||||||| |||||||||| |  ||||| || |||||||||| |||||||    
T  49952102 attttattttggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtctt 49952039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 330383 - 330331
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    |||||||||||||| |||||||||||  ||||| || |||||||||| |||||    
T  330383 aggcttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtc 330331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 2051286 - 2051346
Alignment:
Q  58 ttttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    ||||| ||||||||||||||||||||||||||    ||||| || |||||||||| |||||    
T  2051286 ttttagttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtc 2051346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 22370599 - 22370647
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    ||||||||||||||||||||||  ||||| || |||||||||| |||||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtc 22370647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 98
Target Start/End: Original strand, 25611497 - 25611529
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttg 98  Q
    ||||||||||||||||||| |||||||||||||    
T  25611497 aggcttaattacacttttgatcctcgtgttttg 25611529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 49720908 - 49720856
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    ||||||||||||||||||||||||  | ||||| || |||||||||| |||||    
T  49720908 aggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtc 49720856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 51827956 - 51828008
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    |||||||||||||||||||||||| |  ||||| || |||||||||| |||||    
T  51827956 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtc 51828008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 91
Target Start/End: Complemental strand, 55390147 - 55390119
Alignment:
Q  63 tttaggcttaattacacttttggtcctcg 91  Q
    |||||||||||||||||||||||||||||    
T  55390147 tttaggcttaattacacttttggtcctcg 55390119  T

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Target: chr2 (Bit Score: 157; Significance: 1e-83; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 65 - 241
Target Start/End: Original strand, 11090519 - 11090695
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  11090519 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 11090618  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatg 241  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11090619 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 11090695  T

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Target: chr2; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 66 - 243
Target Start/End: Original strand, 40027139 - 40027316
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  40027139 aggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 40027238  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40027239 ttgcattttttgtcctaccctccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 40027316  T

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Target: chr2; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 63 - 243
Target Start/End: Complemental strand, 40815894 - 40815714
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||||    
T  40815894 tttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcattt 40815795  T
Q  163 ttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  40815794 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 40815714  T

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Target: chr2; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 64 - 243
Target Start/End: Original strand, 239350 - 239528
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||    
T  239350 ttaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 239448  T
Q  164 tgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  239449 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 239528  T

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Target: chr2; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 65 - 243
Target Start/End: Original strand, 22374318 - 22374496
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  22374318 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374417  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||| || |||||||    
T  22374418 gttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttagacctaacctctatgct 22374496  T

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Target: chr2; HSP #6
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 63 - 243
Target Start/End: Complemental strand, 18451380 - 18451200
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||  || |||||| ||||||||    
T  18451380 tttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcattt 18451281  T
Q  163 ttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18451280 ttgttgcatttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 18451200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 66 - 243
Target Start/End: Original strand, 26538096 - 26538273
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||| |||| ||||||||||||||||||    
T  26538096 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttg 26538195  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||    
T  26538196 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttagacctatcctctatgct 26538273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 67 - 241
Target Start/End: Original strand, 28616613 - 28616788
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28616613 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 28616712  T
Q  167 tgcatttttcgtcctaccccccattttattctcc-aaaaacacagagaaatgacagttttagacctaccccctatg 241  Q
    |||| ||||||||||||||||||||||||| ||| |||||| |||||||||  |||||||||||||||||||||||    
T  28616713 tgcaattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagacctaccccctatg 28616788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 65 - 243
Target Start/End: Original strand, 1978106 - 1978284
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  1978106 taggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 1978205  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||| |||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  1978206 gttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 1978284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 70 - 240
Target Start/End: Original strand, 14432145 - 14432315
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||| |||||| |||||||||||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  170 atttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctat 240  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14432245 atttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctat 14432315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 67 - 243
Target Start/End: Original strand, 43058333 - 43058509
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 43058432  T
Q  167 tgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  43058433 tgcatttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 43058509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 63 - 236
Target Start/End: Complemental strand, 26538628 - 26538454
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  26538628 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcattt 26538529  T
Q  163 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttagacctacccc 236  Q
    ||||||||||||||||||||||||||||||| |  | ||| |||| |||||||||||||||||||||||||||||    
T  26538528 ttgttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagacctacccc 26538454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 64 - 243
Target Start/End: Original strand, 3025463 - 3025641
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    ||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||| |||||||||    
T  3025463 ttaggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttt 3025562  T
Q  164 tgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||| |||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||    
T  3025563 tgttgcatttttcgtccta-cccccattttattctcaaaaaacgcaaagaaatgacagttttagacctaccccctatgct 3025641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 69 - 227
Target Start/End: Original strand, 40815347 - 40815506
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttg 40815446  T
Q  169 catttttcgtcctacccccca-ttttattctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||| || | |||||  ||||| |||| ||||||||||||||||||||    
T  40815447 catttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 8425902 - 8425736
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    ||||||||||||||||| || ||||||||| |||||||||||| ||||| ||||||||||||| |||||||||| || ||||||||||||||||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  170 atttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctacccc 236  Q
    |||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  8425802 atttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 8425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 66 - 206
Target Start/End: Original strand, 20444748 - 20444888
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  20444748 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttg 20444847  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    ||||| |||||||||||||||||||||||| ||||||||||    
T  20444848 ttgcagttttcgtcctaccccccattttatcctccaaaaac 20444888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 60 - 227
Target Start/End: Complemental strand, 22374877 - 22374709
Alignment:
Q  60 ttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatca 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  22374877 ttatgtaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatca 22374778  T
Q  160 tttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||||||||| || ||||| |  ||| | |||  ||||||||||||||||||||    
T  22374777 tttttgttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttag 22374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 63 - 227
Target Start/End: Complemental strand, 7446895 - 7446730
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||||||||||||| ||||| ||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  7446895 tttaggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 7446796  T
Q  163 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||||||| || ||||| |  |||||||||| ||||||||||||||||||||    
T  7446795 ttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 66 - 241
Target Start/End: Original strand, 7446341 - 7446519
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||| |||||||||||||| ||||||| |||| ||||| |||||||||||||||||||||||||||  ||||||||||||||||     
T  7446341 aggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttta 7446440  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacag----ttttagacctaccccctatg 241  Q
    |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||    |||||||| |||||||||||    
T  7446441 ttgcatttttcgtcata-cccccattttattctccaaaaacgcagagaaatgacagttaattttagacataccccctatg 7446519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 18450829 - 18450991
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||     
T  18450829 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcatttttt 18450928  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||| |||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  18450929 ttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 35781207 - 35781069
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgtt 167  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||  | ||||||||||||||||||||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  168 gcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  35781107 gcatttttcgtcctaacccccattttatcctccaaaaac 35781069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 65 - 227
Target Start/End: Complemental strand, 11091067 - 11090904
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||    
T  11091067 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattatt 11090968  T
Q  165 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||| ||||||||||||| | || ||||| |  ||||| |||| |||| |||||||| ||||||    
T  11090967 gttgtatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttag 11090904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 63 - 206
Target Start/End: Complemental strand, 20440580 - 20440438
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||  |||| |||||||||    
T  20440580 tttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcattt 20440481  T
Q  163 ttgttgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||||||| ||||||||||| |||||| ||||| ||||||||||    
T  20440480 ttgttgcagttttcgtcctatccccca-tttatcctccaaaaac 20440438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 61 - 227
Target Start/End: Complemental strand, 43058883 - 43058717
Alignment:
Q  61 tatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcat 160  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||||     
T  43058883 tatttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatca- 43058785  T
Q  161 ttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||||||||| || ||||| |  ||||| |||| |||||||||| |||||||||    
T  43058784 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 43058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 70 - 227
Target Start/End: Complemental strand, 40027682 - 40027524
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 40027583  T
Q  170 atttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||| || ||||| |  ||||| |||| ||| |||||| |||||||||    
T  40027582 atttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttag 40027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 35779708 - 35779847
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| ||||| |||| ||||||||||||||||||  || |||||||||||||||||||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgt 35779807  T
Q  167 tgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  35779808 tgcattttttgtcctaccccccattttatcctccaaaaac 35779847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 1978656 - 1978494
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||| || |||||||||||||||||    
T  1978656 taggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcattttt 1978557  T
Q  165 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagtttta 226  Q
    ||||||||||| |||||||| || ||||| |  ||| | ||||||| ||||||| ||||||||    
T  1978556 gttgcattttttgtcctacctcctattttcaaactctagaaacacaaagaaatggcagtttta 1978494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 28617160 - 28616998
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||| ||| ||||||||||||||||||    
T  28617160 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttg 28617061  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||| |||| || ||||| |  ||||| |||| |||||||||  |||||||||    
T  28617060 ttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttag 28616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 68 - 227
Target Start/End: Complemental strand, 239896 - 239736
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgtt 167  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtt 239797  T
Q  168 gcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    || ||||||||| |||| || ||||| |  ||||| |||| |||||||||| |||||||||    
T  239796 gcgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttag 239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 28847242 - 28847123
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||| |||||||||||||||||    
T  28847242 taggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcattttt 28847143  T
Q  165 gttgcatttttcgtcctacc 184  Q
    ||||||||||||||||||||    
T  28847142 gttgcatttttcgtcctacc 28847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 70 - 226
Target Start/End: Original strand, 8425358 - 8425514
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||| || ||||||||||||||||||||| |||||||||||||||| ||||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacgg-tcttcaattatcatttgtgttgc 8425456  T
Q  170 atttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagtttta 226  Q
    ||||||||||||||| || ||||| |  ||||| |||  |||||||||||||||||||    
T  8425457 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 63 - 227
Target Start/End: Complemental strand, 14432690 - 14432525
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    ||||| |||||||||| |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||| |||| |||||||||||||| ||||    
T  14432690 tttagccttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattattt 14432591  T
Q  163 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||| ||||||| || ||||| |  ||| | |||| ||||||||||||||||||||    
T  14432590 ttgttgcatttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 69 - 206
Target Start/End: Original strand, 8972239 - 8972376
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    |||||||||||||||||||||||||||||||| | ||||||||| ||||| |||||||| ||||||||||||||  ||  ||||||||||||||||||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  169 catttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||||||||| |||||||| ||||||| ||||||||||    
T  8972339 catttttcgttctaccccctattttatcctccaaaaac 8972376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 69 - 206
Target Start/End: Original strand, 15551501 - 15551638
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||| |||| |||||||||| |||||||  || ||||| |||||||||||||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  169 catttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||||||||||| |||| ||||||||| ||||||||||    
T  15551601 catttttcgtccaaccctccattttatcctccaaaaac 15551638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 67 - 226
Target Start/End: Complemental strand, 3026006 - 3025848
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||| ||||  ||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  3026006 ggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgt 3025909  T
Q  167 tgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagtttta 226  Q
    |||||||||||||||||| || ||||| |  ||||| |||  |||||||||||||||||||    
T  3025908 tgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 206
Target Start/End: Complemental strand, 15552596 - 15552460
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| || ||  ||||||||||||||||||||||  ||  ||||||||||||||||||||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttg 15552498  T
Q  169 catttttcgtcctaccccccattttattctccaaaaac 206  Q
     |||||||||||||||| |||||||   ||||||||||    
T  15552497 tatttttcgtcctaccctccattttgccctccaaaaac 15552460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 243
Target Start/End: Complemental strand, 28143578 - 28143400
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    |||||||||||| |||||||||||||||  ||||| ||  ||||||||| ||||| ||||  ||| |||  ||||||||  || | | || |||||| ||    
T  28143578 ttaggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgtt 28143479  T
Q  164 tgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    | ||||| |||| |||||||  || |||||   ||||| |||| ||||||||||||||||||||||||||||||||||||    
T  28143478 t-ttgcagttttagtcctacgtcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 28143400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 206
Target Start/End: Complemental strand, 3824251 - 3824115
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    ||||||| |||||||||| |||  ||||  || |||||||||| ||||| ||||||||| |||  ||||||||| |||| |    |||||| ||| ||||    
T  3824251 ttaattatacttttggtcatcgcattttaaccaactcacgaaattggtcatgccctttttaaatcgaacaaaacagttcatatgctatcatgttttttgc 3824152  T
Q  170 atttttcgtcctaccccccattttattctccaaaaac 206  Q
    | |||| || ||| |||||||||||| ||||||||||    
T  3824151 aattttagttctaacccccattttatcctccaaaaac 3824115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 33921168 - 33921107
Alignment:
Q  57 attttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    |||||||||||||||||||||||||||||||||    ||||| || |||||||||| |||||    
T  33921168 attttatttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtc 33921107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 6949999 - 6949939
Alignment:
Q  58 ttttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    |||||||| ||||||||||||||||||||||| |  ||||| || |||||||||| |||||    
T  6949999 ttttattttggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtc 6949939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 38007941 - 38008001
Alignment:
Q  58 ttttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    |||| ||||||||||||||||||||||||||| |  ||||| || |||||||||| |||||    
T  38007941 ttttttttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtc 38008001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 42192790 - 42192738
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    ||||||||||||||||||||||||||  ||||| || |||||||||| |||||    
T  42192790 aggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtc 42192738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 4355755 - 4355806
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    ||||||||||||||||||||||| |  ||||| ||||||||||||| |||||    
T  4355755 ggcttaattacacttttggtccttgcattttgacctactcacgaaattggtc 4355806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 225
Target Start/End: Complemental strand, 31797324 - 31797166
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||||||||||||||   ||||| ||  ||||||||| ||||| ||||  ||| |||  ||||||||| || | | || ||| || |||     
T  31797324 aggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat-atgtttt 31797226  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagtttt 225  Q
    ||||| |||| |||||||| || |||||   ||| | |||| ||||||||||||||||||    
T  31797225 ttgcagttttagtcctacctcctattttcaactctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 232
Target Start/End: Complemental strand, 14942394 - 14942225
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatca--ttt 162  Q
    ||||||||||||||||||||||| |||  ||||| ||  ||||||||| |||||||| |  ||| |||  ||||||||  || | | ||||||||  |||    
T  14942394 taggcttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaattatcatgttt 14942295  T
Q  163 ttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagaccta 232  Q
    || ||||| |||| |||||||  || |||||   ||||| |||  |||||||||  ||||||||||||||    
T  14942294 tttttgcagttttagtcctacatcctattttcaactccagaaatgcagagaaatcgcagttttagaccta 14942225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 25336149 - 25336095
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    |||||||||||||||||||||||||| |  ||||| || |||||||||| |||||    
T  25336149 ttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtc 25336095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 20128292 - 20128232
Alignment:
Q  58 ttttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    |||| ||||||||||||||||||||||||||| |  ||||  || |||||||||| |||||    
T  20128292 ttttttttaggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtc 20128232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 43216256 - 43216204
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    |||||||||||||||||| ||||| | |||||| || |||||||||| |||||    
T  43216256 aggcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtc 43216204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 44220192 - 44220140
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    |||||||||||||||||| |||||||  ||||| || |||||||||| |||||    
T  44220192 aggcttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtc 44220140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 61 - 243
Target Start/End: Complemental strand, 134224 - 134042
Alignment:
Q  61 tatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcat 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| | ||||||||| |||    
T  134224 tatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacat 134125  T
Q  161 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  134124 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 134042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 153; Significance: 3e-81; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 65 - 241
Target Start/End: Original strand, 1665 - 1841
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||    
T  1665 taggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcattttt 1764  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatg 241  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1765 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 64 - 227
Target Start/End: Complemental strand, 2215 - 2051
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||  |||||||||||||||    
T  2215 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 2116  T
Q  164 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||||| || ||||| |  ||||| |||| ||||||||||| ||||||||    
T  2115 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 147; Significance: 1e-77; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 57 - 243
Target Start/End: Original strand, 64292 - 64478
Alignment:
Q  57 attttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaatta 156  Q
    |||| ||| ||||||||||||||||||||||||||||||||| | |||||||||||||| || || |||||||||||||||||||||||| |||||||||    
T  64292 atttaattaaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaatta 64391  T
Q  157 tcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  64392 tcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 64478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 70 - 182
Target Start/End: Complemental strand, 64847 - 64735
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 64748  T
Q  170 atttttcgtccta 182  Q
    |||||||||||||    
T  64747 atttttcgtccta 64735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 205911 - 205738
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    ||||||||||||||| ||||||   ||||| || |||||||||| ||||| ||||  ||| |||  ||||||||| || | | || |||||| ||| |||    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt-ttg 205813  T
Q  169 catttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    || |||| |||||||  || |||||   |||||||||| |||||||||| |||||||||||||||||||||||||    
T  205812 cagttttagtcctacgtcctattttcaactccaaaaacgcagagaaatggcagttttagacctaccccctatgct 205738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 1e-77; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 33109686 - 33109860
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttg 33109785  T
Q  169 catttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  33109786 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33109860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 46193948 - 46193774
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 46193849  T
Q  169 catttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||    
T  46193848 catttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttagacctaccccctatgct 46193774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 11153701 - 11153516
Alignment:
Q  58 ttttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattat 157  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| | ||||||||||    
T  11153701 tttttttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattat 11153602  T
Q  158 catttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||    
T  11153601 catttttgttgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaataacagttttagacttaccccctatgct 11153516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 59 - 243
Target Start/End: Original strand, 12234321 - 12234505
Alignment:
Q  59 tttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatc 158  Q
    |||| ||||||||||||||||||||||||||| ||||||||| || |||||||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  12234321 tttaattaggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatc 12234420  T
Q  159 atttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  12234421 atttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaaacctaccccctatgct 12234505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 25447783 - 25447611
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  25447783 taggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 25447684  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccc 237  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  25447683 gttgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaattacagttttagacctaccccc 25447611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 63 - 243
Target Start/End: Original strand, 25937666 - 25937846
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  25937666 tttaggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 25937765  T
Q  163 ttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||| |||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  25937766 ttgttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 25937846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 243
Target Start/End: Complemental strand, 15523780 - 15523603
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| ||| |||||| |||||||||||    
T  15523780 aggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttg 15523681  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  15523680 ttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 15523603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 22434726 - 22434547
Alignment:
Q  62 atttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatt 161  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||  |||||||||||||    
T  22434726 atttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcatt 22434628  T
Q  162 tttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22434627 tttgttgcatttttcgtcctaccccc-attttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 22434547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 38962362 - 38962195
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    |||||||||| |||||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  169 catttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctacccc 236  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  38962262 catttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctacccc 38962195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 4219559 - 4219733
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||| | |||||||| || |||||||||||||||||||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  169 catttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||    
T  4219659 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaaacctatcccctatgct 4219733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 23494445 - 23494619
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||| ||||||||||||||||| |||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattg 23494544  T
Q  169 catttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||    
T  23494545 catttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttagacctacctcatatgct 23494619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 63 - 243
Target Start/End: Original strand, 51020793 - 51020973
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||||||||||||||||||| ||||| |||||||||  | |||| ||||||||| ||||||||||||||||||||||||| | |||||||||||||||    
T  51020793 tttaggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcattt 51020892  T
Q  163 ttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||    
T  51020893 ttgttgcatttttcgtcctaccccccattttattcttcaaaaacgtagagaaatgacagttttagacctaccccctatgct 51020973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 64 - 243
Target Start/End: Original strand, 45082429 - 45082606
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    ||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||||| ||||||||||||||||    
T  45082429 ttaggtttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttt 45082527  T
Q  164 tgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  45082528 tgttgcatttttcgtccta-cccccattttattctccaaaaacacagagaaatgacaattttagacctaccccctatgct 45082606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 243
Target Start/End: Complemental strand, 22170482 - 22170306
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||| || || |||| |||||||||| |||||||||||  |||||||||||||||||    
T  22170482 aggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttg 22170384  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  22170383 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacgtaccccctatgct 22170306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 243
Target Start/End: Original strand, 48526195 - 48526371
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||    
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 48526294  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||    
T  48526295 ttgcatttttcgtccta-cccccattttattctccaaaaatgcagagaaatgacagttttagatctaccccctatgct 48526371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 65 - 243
Target Start/End: Complemental strand, 54995614 - 54995437
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||| |||||| ||||| ||||    
T  54995614 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-tttt 54995516  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||| |||||||||||||||| |||||| || |||||||| ||||||||||||||| ||||||||    
T  54995515 gttgcatttttcgtcctaacccccattttattctctaaaaacgcaaagaaatgatagttttagacctaccacctatgct 54995437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 2118837 - 2118665
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    |||||||||||||||||| |||||||||||||| |||| |||||||||| |  |||||||||||| |||||||||||  |||||||||||||||||||||    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgttgc 2118738  T
Q  170 atttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  2118737 atttttcgtcctac-ccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 2118665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 67 - 229
Target Start/End: Original strand, 46193405 - 46193568
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgt 46193504  T
Q  167 tgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttagac 229  Q
    |||||||||||||||||| || ||||| |  ||||| |||| ||||||||||||||||||||||    
T  46193505 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 46193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 70 - 227
Target Start/End: Complemental strand, 48526723 - 48526565
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgttgc 48526624  T
Q  170 atttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  48526623 atttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 67 - 227
Target Start/End: Original strand, 22434179 - 22434340
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  22434179 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22434278  T
Q  167 tgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    || ||||||||||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  22434279 tgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 67 - 227
Target Start/End: Original strand, 25447247 - 25447408
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 25447346  T
Q  167 tgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||| || ||||| |  ||||| |||| ||||||||||||| ||||||    
T  25447347 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 45082969 - 45082808
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  45082969 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 45082870  T
Q  167 tgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||| || ||||| |  ||| | |||| ||||||||||||||||||||    
T  45082869 tgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 64 - 183
Target Start/End: Complemental strand, 23494991 - 23494872
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  23494991 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 23494892  T
Q  164 tgttgcatttttcgtcctac 183  Q
    ||||||||||||||||||||    
T  23494891 tgttgcatttttcgtcctac 23494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 15523233 - 15523395
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||    
T  15523233 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttt 15523332  T
Q  165 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagtttta 226  Q
     ||||||||||||||||||| || ||||| |  ||| | |||| |||||||||||||||||||    
T  15523333 tttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagtttta 15523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 64 - 227
Target Start/End: Complemental strand, 20471059 - 20470895
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||  |||||||||||||||    
T  20471059 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttt 20470960  T
Q  164 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||||| || ||||| |  ||||| |||| ||||||||||| ||||||||    
T  20470959 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 12234874 - 12234713
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 12234775  T
Q  167 tgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||| || ||||| |  | ||| |||  ||||||||||||||||||||    
T  12234774 tgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttag 12234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 63 - 227
Target Start/End: Complemental strand, 4220108 - 4219943
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattt 162  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||| |||  ||||||||||||||    
T  4220108 tttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcattt 4220009  T
Q  163 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||||||| || ||||| |  || ||||||| ||||||||| ||||||||||    
T  4220008 ttgttgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 25938217 - 25938056
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||| || ||||||||||||||||||    
T  25938217 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttg 25938118  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagtttta 226  Q
    |||||||||| |||||||| || ||||| |  ||||| ||||||| ||||||| ||||||||    
T  25938117 ttgcattttttgtcctacctcctattttcaaactccagaaacacaaagaaatggcagtttta 25938056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 54995067 - 54995230
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||| | ||||||||||||||||||||||||| |||||||||||||||||    
T  54995067 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 54995166  T
Q  165 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||||| || ||||| |  ||||| |||   |||||||||||||||||||    
T  54995167 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 54995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 11153145 - 11153307
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| |||| |||||||| ||||||||||||||||||    
T  11153145 aggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttg 11153244  T
Q  166 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||||||||||| || ||||| |  | ||| |||| ||||||||||||||||||||    
T  11153245 ttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 65 - 193
Target Start/End: Complemental strand, 33110011 - 33109883
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  33110011 taggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcattttt 33109912  T
Q  165 gttgcatttttcgtcctaccccccatttt 193  Q
    |||||||||||||||||||| || |||||    
T  33109911 gttgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 70 - 227
Target Start/End: Original strand, 18751602 - 18751760
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgttgc 18751701  T
Q  170 atttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    ||||||||||| ||| || ||||| |  ||||| |||| |||| ||||| |||||||||    
T  18751702 atttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttag 18751760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 135 - 243
Target Start/End: Complemental strand, 12503913 - 12503805
Alignment:
Q  135 gaacaaaacggttcttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctacc 234  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 12503814  T
Q  235 ccctatgct 243  Q
    |||||||||    
T  12503813 ccctatgct 12503805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 65 - 227
Target Start/End: Complemental strand, 51021342 - 51021180
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||| |||||||| ||||    
T  51021342 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatca-tttt 51021244  T
Q  165 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    |||||||||||||||||||| || ||||| |  ||||| |||| |||||||||| || ||||||    
T  51021243 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttag 51021180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 64 - 181
Target Start/End: Complemental strand, 18764068 - 18763951
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttt 163  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||  ||||| |||||||||    
T  18764068 ttagacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttt 18763969  T
Q  164 tgttgcatttttcgtcct 181  Q
    ||||||||||||||||||    
T  18763968 tgttgcatttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 43243807 - 43243687
Alignment:
Q  85 gtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcatttttcgtcctacc 184  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||     
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctac- 43243709  T
Q  185 ccccattttattctccaaaaac 206  Q
    ||||||||||| ||||||||||    
T  43243708 ccccattttatcctccaaaaac 43243687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 65 - 206
Target Start/End: Original strand, 48293592 - 48293733
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| || || || |  ||||||||| |||||||  ||||||||||||||||||||    
T  48293592 taggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcattttt 48293691  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||||||||||| |||| ||| ||||||||||||||||||||    
T  48293692 gttgcatttttcatcctgccctccattttattctccaaaaac 48293733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 2118295 - 2118419
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| |||||||  || |||||||||||||||||||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttg 2118394  T
Q  169 catttttcgtcctaccccccatttt 193  Q
    |||||||||||||||| || |||||    
T  2118395 catttttcgtcctacctcctatttt 2118419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 58 - 206
Target Start/End: Complemental strand, 20958413 - 20958267
Alignment:
Q  58 ttttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattat 157  Q
    |||| |||| |||||||||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||   || ||||||||||    
T  20958413 ttttctttacgcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattat 20958314  T
Q  158 catttttgttgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||||||||||||||||| |||||| |||||||||||| ||||||||||    
T  20958313 catttttgttgcattttt-gtccta-cccccattttatcctccaaaaac 20958267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 44892703 - 44892554
Alignment:
Q  57 attttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaatta 156  Q
    |||||| ||| ||||||||| | ||||||||||||||||||| ||||||||||||| ||||  |||| ||||||||||||||||||| ||  ||||||||    
T  44892703 attttaattaagcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaatta 44892604  T
Q  157 tcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    |  |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  44892603 tattttttgttgcatttttcgtcctaccctccattttatcctccaaaaac 44892554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 43281317 - 43281198
Alignment:
Q  85 gtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcatttttcgtcctacc 184  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  43281317 gtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacc 43281219  T
Q  185 ccccattttattctccaaaaa 205  Q
    ||||||||||| ||| |||||    
T  43281218 ccccattttatcctcaaaaaa 43281198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 65 - 206
Target Start/End: Complemental strand, 48713893 - 48713752
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||| ||||||||||||||  | |||||||||| ||||||||| |||| ||||| ||| |||||||||||||||||||  || |||||||||||||||||    
T  48713893 taggtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcattttt 48713794  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||    
T  48713793 gttgcatttttcgtcctcccctccattttatcctccaaaaac 48713752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 48295088 - 48294948
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||| |||||||| ||||||||||  |||||||||||| ||||||||||  ||||||||| |||||||  ||  ||||||||||||||||||    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgt 48294989  T
Q  167 tgcattttt-cgtcctaccccccattttattctccaaaaac 206  Q
    ||||||||| ||||||||||||||||||||  |||||||||    
T  48294988 tgcatttttccgtcctaccccccattttatcttccaaaaac 48294948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 10258433 - 10258306
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||| ||||| |||||||||||||||||  ||||  ||| |||||||||||||||||    
T  10258433 aggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttttg 10258334  T
Q  166 ttgcatttttcgtcctaccccccatttt 193  Q
    ||||| |||| ||| ||||||| |||||    
T  10258333 ttgcagttttagtcttaccccctatttt 10258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 35363146 - 35363028
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgccctttt-aaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||| ||||| |||| | |||||||||||  |||||||||||||||||    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttg 35363047  T
Q  166 ttgcatttttcgtcctacc 184  Q
    ||||||||||||| |||||    
T  35363046 ttgcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 65 - 203
Target Start/End: Original strand, 48708293 - 48708431
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    ||||||||||||||||||||||||  |||||||||||||  ||||||| || || ||||||||||||||| |||||||| || |||||||||||||||||    
T  48708293 taggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcattttt 48708392  T
Q  165 gttgcatttttcgtcctaccccccattttattctccaaa 203  Q
    ||||||||| |  ||||||| | |||||||| |||||||    
T  48708393 gttgcatttataatcctaccactcattttatcctccaaa 48708431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 70 - 203
Target Start/End: Original strand, 16690939 - 16691072
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    ||||||||| |||||||||| ||||||||  |||||||||||| ||||| ||||  ||||||||| |||||||   | ||||||||||||||||||||||    
T  16690939 ttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgttgc 16691038  T
Q  170 atttttcgtcctaccccccattttattctccaaa 203  Q
    |||||||||||||||||| ||||||| |||||||    
T  16691039 atttttcgtcctacccccgattttatcctccaaa 16691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 12503453 - 12503597
Alignment:
Q  84 ggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcatttttcgtcctac 183  Q
    ||||||||||||||| | |||||||||||||| ||  ||| ||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  184 cccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    | || ||||| |  ||||| |||| ||||||||| ||||||||||    
T  12503553 ctcctattttcaaactccagaaacgcagagaaattacagttttag 12503597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 20957196 - 20957327
Alignment:
Q  74 ttacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcattt 173  Q
    ||||| |||||||||||| |||||||| ||||||||||| ||||| | | ||||||||||| |||||||  || |||||||||||| |||||||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  174 ttcgtcctaccccccattttattctccaaaaa 205  Q
    |||||| ||| ||||||||||||||| |||||    
T  20957296 ttcgtcatactccccattttattctcaaaaaa 20957327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 44890518 - 44890656
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgtt 167  Q
    ||||||||||| |||||||||| |||||||| |||| |||||||| ||||| |||||||||||||||||||||||   | ||| ||||||  ||||||||    
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgtt 44890617  T
Q  168 gcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    ||||||||| || ||||||||||||||| ||| ||||||    
T  44890618 gcatttttcatcataccccccattttatcctcaaaaaac 44890656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 67 - 203
Target Start/End: Complemental strand, 16691616 - 16691481
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||||||||||| |||  |||||||| ||||||||||||| ||||| ||||  |||||| || |||||||  || ||| |||||| ||||||||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaa-cataacaaaattgtcctttaattattatttttgt 16691518  T
Q  167 tgcatttttcgtcctaccccccattttattctccaaa 203  Q
    ||||||||||||| |||| |||||||||| |||||||    
T  16691517 tgcatttttcgtcatacctcccattttatcctccaaa 16691481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 16318322 - 16318251
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaa 137  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||    
T  16318322 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 206
Target Start/End: Original strand, 43242328 - 43242409
Alignment:
Q  125 ttttaaaacagaacaaaacggttcttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||| || |||||||  |||||||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaattttatcatccaaaaac 43242409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 18752038 - 18751971
Alignment:
Q  176 cgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||| |||||||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  18752038 cgtcctaccccctattttattctccaaaaatgcagagaaataacagttttagacctaccccctatgct 18751971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 243
Target Start/End: Original strand, 17503973 - 17504149
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||||||||| ||| ||||||||||  ||||| ||  ||||||||| ||||| ||||  ||| |||  ||||| ||| || ||  || |||||| |||     
T  17503973 aggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtccta-aactatcatgtttt 17504071  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||| |||| |||||||| || |||||   ||||| ||||  |||||||||||||||||||||||||||||||||||    
T  17504072 ttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttagacctaccccctatgct 17504149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 44220861 - 44220783
Alignment:
Q  128 taaaacagaacaaaacggttcttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||||||||||||||  || ||||| |||||||||||||| |||||||||| |||||||  ||||||| ||||||||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacccctaattttatcctccaaaaac 44220783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 175
Target Start/End: Original strand, 55189528 - 55189636
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    |||||||||| | ||||| ||||||||||||| |||| |||  ||| ||||  ||||||||||||| |||||||||  ||  |||||||||||||||||     
T  55189528 ggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttttgc 55189627  T
Q  167 tgcattttt 175  Q
    | |||||||    
T  55189628 tacattttt 55189636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 17504369 - 17504329
Alignment:
Q  203 aaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  17504369 aaacgcagagaaatgacagttttagacctaccccctatgct 17504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 35193443 - 35193483
Alignment:
Q  203 aaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  35193443 aaacgcagagaaatgacagttttagacctaccccctatgct 35193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 40160236 - 40160269
Alignment:
Q  210 gagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||||||||||||||||||||||||||||||    
T  40160236 gagaaatgacagttttagacctaccccctatgct 40160269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 30598065 - 30597939
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgg-tcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    ||||| |||||||||||||||||||||||||| || ||||||| || ||| |||  | |||||||| | ||||||||  || | | |||||| |||||||    
T  30598065 ggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatc-gaacaaaatcgtccctaaattat-atttttg 30597968  T
Q  166 ttgcatttttcgtcctaccccccatttta 194  Q
    ||||| |||| |||||| |||| ||||||    
T  30597967 ttgcacttttggtcctaacccctatttta 30597939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 55677505 - 55677453
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    |||||||||||||||||||||||| || ||||| || |||||||||| |||||    
T  55677505 aggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtc 55677453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 12593573 - 12593518
Alignment:
Q  63 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    ||||||||||||||||||||||||||| |  ||||| || |||||||||| |||||    
T  12593573 tttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtc 12593518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 229159 - 229217
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcc 123  Q
    |||| ||||||||||||||||||||||| ||||| ||  ||| ||||| ||||||||||    
T  229159 taggtttaattacacttttggtcctcgtattttgaccagctcgcgaaaatggtcttgcc 229217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 186
Target Start/End: Complemental strand, 24336307 - 24336190
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    |||||||||||||||| ||||||  ||||| |   ||||||||| ||||| ||||  ||| |||  ||||||||| |||| | ||||||||| ||| |||    
T  24336307 cttaattacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgttcctaaattatcatgttttttg 24336208  T
Q  169 catttttcgtcctacccc 186  Q
    |  |||| ||||||||||    
T  24336207 ctcttttagtcctacccc 24336190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 44219377 - 44219426
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    |||||||||||||||||||||||| ||||  || |||||||||| |||||    
T  44219377 cttaattacacttttggtcctcgtattttaaccaactcacgaaattggtc 44219426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 45838537 - 45838598
Alignment:
Q  57 attttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    ||||| |||||||||| |||||||||||||||| || ||||| || ||||||| || |||||    
T  45838537 attttttttaggcttatttacacttttggtccttgtattttgaccaactcacgtaattggtc 45838598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 46737203 - 46737150
Alignment:
Q  65 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    ||||||||||||||||||||||||| |  ||||| || |||||||||| |||||    
T  46737203 taggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtc 46737150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 33689824 - 33689880
Alignment:
Q  62 atttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 118  Q
    |||||||||||||||||||||||||||| |  ||||| || |||||| ||| |||||    
T  33689824 atttaggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtc 33689880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 10414 - 10242
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  170 atttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||| |||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  10314 atttttcgtcctac-ccccattttattctccaaaaattcagagaaatgacagttttaaacctaccccctatgct 10242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 9935 - 10039
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||||| |    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttac 10034  T
Q  170 atttt 174  Q
    |||||    
T  10035 atttt 10039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 135; Significance: 2e-70; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 755 - 928
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 168  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttg 853  T
Q  169 catttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||| ||||||    
T  854 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacataccccttatgct 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 57 - 236
Target Start/End: Complemental strand, 1296 - 1116
Alignment:
Q  57 attttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaatta 156  Q
    |||| |||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  1296 atttcattttggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 1197  T
Q  157 tcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttagacctacccc 236  Q
    ||||||||||||||| |||||||||||| || ||||| |  | ||| |||| |||| ||||| |||||||||||| |||||    
T  1196 tcatttttgttgcatctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttagacccacccc 1116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 61 - 243
Target Start/End: Complemental strand, 42709 - 42528
Alignment:
Q  61 tatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcat 160  Q
    |||||||||||||||| |||||||| ||||||||||||| ||||||| ||||||| |  ||||||||||||||||||||||||||| ||||| |||||||    
T  42709 tatttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcat 42610  T
Q  161 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42609 ttttgtttcatttttcgtcctac-ccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 42528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 42172 - 42339
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    |||||||||||||| || |||||||||||| ||| ||||||||||| || |||| ||||||||||||||||||||||  |||||||||||||||||||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 42271  T
Q  170 atttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttagacctacccc 236  Q
    |||||| ||| |||| || ||||| |  || || |||| |||||||||||||||||||||||||||||    
T  42272 attttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacctacccc 42339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 66 - 234
Target Start/End: Original strand, 18834 - 19001
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  18834 aggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttg 18933  T
Q  166 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctacc 234  Q
    ||||||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||||||||| ||||    
T  18934 ttgcatttttcatccta-cccccattttattctccaaaaacgcagagaaataacagttttagacttacc 19001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 67 - 164
Target Start/End: Complemental strand, 19166 - 19069
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  19166 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 86 - 243
Target Start/End: Original strand, 10640 - 10797
Alignment:
Q  86 tcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcatttttcgtcctaccc 185  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccc 10739  T
Q  186 cccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 243  Q
     |||||||||||||||||||  |||||||||||||||||||||| |||||||||||||    
T  10740 tccattttattctccaaaaatgcagagaaatgacagttttagacgtaccccctatgct 10797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 67 - 193
Target Start/End: Complemental strand, 11168 - 11042
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 166  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 11069  T
Q  167 tgcatttttcgtcctaccccccatttt 193  Q
    |||||||||||||||||| || |||||    
T  11068 tgcatttttcgtcctacctcctatttt 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 28789 - 28662
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttg 165  Q
    |||| ||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||    
T  28789 aggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 28690  T
Q  166 ttgcatttttcgtcctaccccccatttt 193  Q
    ||||| |||||||||| |||||||||||    
T  28689 ttgcagttttcgtccttccccccatttt 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 135 - 243
Target Start/End: Original strand, 16564 - 16672
Alignment:
Q  135 gaacaaaacggttcttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctacc 234  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 16663  T
Q  235 ccctatgct 243  Q
    |||||||||    
T  16664 ccctatgct 16672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 17024 - 16880
Alignment:
Q  84 ggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcatttttcgtcctac 183  Q
    ||||||||||||||| | |||||||||||||| ||  ||| ||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  184 cccccatttt-attctccaaaaacacagagaaatgacagttttag 227  Q
    | || ||||| |  ||||| |||| ||||||||| ||||||||||    
T  16924 ctcctattttcaaactccagaaacgcagagaaattacagttttag 16880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 568 - 706
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgtt 167  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || || |||||||||||||||||||||||| || ||||||||||||||||||||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgtt 667  T
Q  168 gcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    | ||||||||||  ||| ||||||| || ||||||||||    
T  668 gtatttttcgtctcacctcccatttgatcctccaaaaac 706  T

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Target: scaffold0057 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 70 - 206
Target Start/End: Complemental strand, 62000 - 61864
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||||| | ||||||||||| |||||||||   |  ||||| |||||||||||||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  170 atttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||||||||||||||||||||||| | ||||||||||    
T  61900 atttttcgtcctaccccccattttgtcctccaaaaac 61864  T

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Target: scaffold0057; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 141
Target Start/End: Original strand, 61018 - 61102
Alignment:
Q  57 attttatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaa 141  Q
    ||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||| || || |||| |||||||| ||||||||    
T  61018 attttatataggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

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Target: scaffold1696 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 71 - 206
Target Start/End: Original strand, 454 - 587
Alignment:
Q  71 taattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgca 170  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||||| ||  ||||||||||| |||| ||  || |||||||||||||||||||||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  171 tttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||||||||||| | |||||||||| ||| ||||||    
T  553 tttttcgtccta-cacccattttatcctcaaaaaac 587  T

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Target: scaffold0076 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 8551 - 8451
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 169  Q
    |||||||||||||||||| || |||||||| ||||| |||||||||||| | ||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgc 8452  T
Q  170 a 170  Q
    |    
T  8451 a 8451  T

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Target: scaffold0168 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 7778 - 7694
Alignment:
Q  122 cccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac 206  Q
    |||||||||||||||||||||| ||  |||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  7778 cccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctattttatcctccaaaaac 7694  T

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Target: scaffold1339 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 92
Target Start/End: Complemental strand, 58 - 30
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgt 92  Q
    |||||||||||||||||||||||||||||    
T  58 ttaggcttaattacacttttggtcctcgt 30  T

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Target: scaffold0830 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0830
Description:

Target: scaffold0830; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 92
Target Start/End: Complemental strand, 5380 - 5352
Alignment:
Q  64 ttaggcttaattacacttttggtcctcgt 92  Q
    |||||||||||||||||||||||||||||    
T  5380 ttaggcttaattacacttttggtcctcgt 5352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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