View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19719_low_4 (Length: 419)

Name: NF19719_low_4
Description: NF19719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19719_low_4
NF19719_low_4
[»] chr8 (37 HSPs)
chr8 (225-404)||(39219678-39219857)
chr8 (231-404)||(37667037-37667213)
chr8 (265-404)||(19649143-19649281)
chr8 (251-403)||(33588681-33588829)
chr8 (13-66)||(27074313-27074366)
chr8 (251-404)||(41891819-41891971)
chr8 (264-323)||(3097219-3097278)
chr8 (251-390)||(29970773-29970911)
chr8 (327-400)||(35239434-35239507)
chr8 (249-313)||(20190186-20190250)
chr8 (251-382)||(36779370-36779500)
chr8 (264-317)||(26243167-26243220)
chr8 (251-404)||(41408147-41408299)
chr8 (264-316)||(22936806-22936858)
chr8 (249-316)||(26490977-26491045)
chr8 (251-404)||(35550177-35550330)
chr8 (246-312)||(39210940-39211003)
chr8 (226-261)||(19649271-19649306)
chr8 (251-337)||(31246314-31246399)
chr8 (251-338)||(38715209-38715295)
chr8 (265-316)||(43550935-43550986)
chr8 (265-311)||(10552923-10552969)
chr8 (251-316)||(28425471-28425537)
chr8 (264-317)||(3467576-3467629)
chr8 (330-402)||(12124809-12124881)
chr8 (303-403)||(15115682-15115781)
chr8 (251-315)||(38516343-38516407)
chr8 (264-316)||(40742168-40742220)
chr8 (264-316)||(40742308-40742360)
chr8 (265-316)||(15206740-15206791)
chr8 (265-316)||(42149049-42149100)
chr8 (251-316)||(1373083-1373148)
chr8 (264-316)||(440202-440254)
chr8 (264-316)||(4941794-4941846)
chr8 (264-316)||(6399121-6399173)
chr8 (264-316)||(23018140-23018192)
chr8 (249-316)||(30081648-30081715)
[»] chr3 (50 HSPs)
chr3 (251-404)||(44225514-44225666)
chr3 (227-403)||(10852688-10852864)
chr3 (251-397)||(25181166-25181311)
chr3 (226-404)||(7012591-7012767)
chr3 (226-404)||(23918791-23918969)
chr3 (251-404)||(52736713-52736865)
chr3 (226-383)||(46864264-46864420)
chr3 (264-403)||(30301202-30301338)
chr3 (265-401)||(42644215-42644349)
chr3 (264-391)||(10853280-10853406)
chr3 (251-404)||(53078307-53078459)
chr3 (328-401)||(32901871-32901944)
chr3 (328-404)||(50671880-50671956)
chr3 (226-404)||(29252099-29252273)
chr3 (265-316)||(53179884-53179935)
chr3 (327-377)||(32932188-32932238)
chr3 (264-316)||(10334174-10334226)
chr3 (264-316)||(21225026-21225078)
chr3 (264-316)||(23496353-23496405)
chr3 (272-316)||(25848068-25848112)
chr3 (249-312)||(41459255-41459319)
chr3 (264-316)||(50664794-50664846)
chr3 (226-316)||(31084243-31084334)
chr3 (265-316)||(44224798-44224849)
chr3 (265-316)||(52931586-52931637)
chr3 (344-403)||(53567881-53567940)
chr3 (265-403)||(21023229-21023366)
chr3 (264-317)||(19877452-19877505)
chr3 (264-317)||(38340840-38340893)
chr3 (251-323)||(52966808-52966881)
chr3 (264-316)||(3348279-3348331)
chr3 (265-316)||(4984617-4984668)
chr3 (265-316)||(23207082-23207133)
chr3 (264-307)||(29716699-29716742)
chr3 (265-308)||(30809959-30810002)
chr3 (265-316)||(34561144-34561195)
chr3 (250-316)||(49526667-49526734)
chr3 (264-314)||(16246107-16246157)
chr3 (264-392)||(20813107-20813234)
chr3 (327-405)||(52931827-52931905)
chr3 (249-317)||(14651099-14651167)
chr3 (251-316)||(31766175-31766240)
chr3 (335-403)||(4486762-4486830)
chr3 (264-316)||(15511389-15511441)
chr3 (264-316)||(26519700-26519752)
chr3 (264-316)||(35930774-35930826)
chr3 (264-316)||(38172320-38172372)
chr3 (264-316)||(44939429-44939480)
chr3 (264-316)||(48189455-48189506)
chr3 (225-316)||(51285662-51285754)
[»] chr2 (44 HSPs)
chr2 (230-405)||(23359906-23360081)
chr2 (272-404)||(23377462-23377593)
chr2 (226-404)||(29844135-29844312)
chr2 (251-390)||(12110847-12110984)
chr2 (249-390)||(1763192-1763332)
chr2 (251-403)||(5055128-5055279)
chr2 (219-322)||(27911445-27911549)
chr2 (332-404)||(37543863-37543935)
chr2 (251-316)||(3853945-3854011)
chr2 (272-404)||(42770415-42770544)
chr2 (264-316)||(1945050-1945102)
chr2 (265-317)||(16467130-16467182)
chr2 (264-312)||(38600454-38600502)
chr2 (264-316)||(41580721-41580773)
chr2 (264-316)||(2215297-2215349)
chr2 (264-316)||(7296200-7296252)
chr2 (249-316)||(18511147-18511215)
chr2 (264-316)||(34433317-34433369)
chr2 (264-316)||(39106680-39106732)
chr2 (264-316)||(42089539-42089591)
chr2 (264-315)||(10918649-10918700)
chr2 (334-405)||(37531903-37531974)
chr2 (330-368)||(6737621-6737659)
chr2 (272-313)||(30007572-30007613)
chr2 (264-317)||(31224724-31224777)
chr2 (264-316)||(2213551-2213603)
chr2 (264-316)||(2213692-2213744)
chr2 (348-392)||(3853870-3853914)
chr2 (264-316)||(5916253-5916304)
chr2 (264-316)||(7295359-7295411)
chr2 (264-316)||(7472685-7472736)
chr2 (279-403)||(7741102-7741224)
chr2 (264-316)||(8170358-8170409)
chr2 (264-316)||(9988512-9988564)
chr2 (351-403)||(14532042-14532094)
chr2 (264-316)||(14821208-14821259)
chr2 (226-254)||(23377597-23377625)
chr2 (264-316)||(25747893-25747944)
chr2 (264-316)||(28127298-28127350)
chr2 (264-316)||(30599915-30599967)
chr2 (264-316)||(36312322-36312373)
chr2 (264-316)||(36548244-36548296)
chr2 (264-316)||(39141481-39141532)
chr2 (264-316)||(44619072-44619124)
[»] scaffold0015 (1 HSPs)
scaffold0015 (251-405)||(65448-65601)
[»] chr5 (31 HSPs)
chr5 (225-404)||(22810989-22811168)
chr5 (276-404)||(3748861-3748988)
chr5 (251-387)||(31215372-31215506)
chr5 (277-404)||(43152386-43152512)
chr5 (278-377)||(43045198-43045296)
chr5 (251-404)||(2868350-2868502)
chr5 (328-404)||(32560346-32560422)
chr5 (249-404)||(621289-621443)
chr5 (264-391)||(3060234-3060358)
chr5 (265-316)||(40495369-40495420)
chr5 (251-316)||(2483710-2483776)
chr5 (330-404)||(19204079-19204153)
chr5 (251-316)||(22482239-22482305)
chr5 (285-405)||(33740847-33740966)
chr5 (265-394)||(37036719-37036844)
chr5 (264-316)||(8049061-8049113)
chr5 (264-316)||(9275494-9275546)
chr5 (264-316)||(13253093-13253144)
chr5 (264-316)||(39987977-39988029)
chr5 (264-315)||(19784864-19784915)
chr5 (264-315)||(24045881-24045932)
chr5 (266-316)||(10058124-10058174)
chr5 (264-316)||(2430307-2430358)
chr5 (264-316)||(3667904-3667956)
chr5 (264-316)||(5710396-5710448)
chr5 (264-316)||(20068964-20069016)
chr5 (251-318)||(24036621-24036689)
chr5 (265-313)||(27021181-27021229)
chr5 (249-316)||(33467986-33468054)
chr5 (264-316)||(35760239-35760291)
chr5 (264-316)||(41834942-41834994)
[»] chr4 (62 HSPs)
chr4 (226-404)||(22699676-22699854)
chr4 (226-404)||(46957957-46958135)
chr4 (226-404)||(22980676-22980854)
chr4 (226-404)||(22994262-22994441)
chr4 (251-387)||(39000547-39000681)
chr4 (251-404)||(5025463-5025615)
chr4 (261-404)||(28947759-28947901)
chr4 (225-323)||(4954024-4954123)
chr4 (251-404)||(20231916-20232069)
chr4 (330-404)||(40286223-40286297)
chr4 (220-316)||(48550395-48550492)
chr4 (264-404)||(20676984-20677122)
chr4 (225-317)||(36150624-36150717)
chr4 (248-316)||(2341449-2341517)
chr4 (272-404)||(14597645-14597776)
chr4 (285-404)||(22702482-22702600)
chr4 (285-404)||(22991517-22991635)
chr4 (338-405)||(38306201-38306268)
chr4 (227-316)||(16492948-16493038)
chr4 (264-316)||(16566326-16566378)
chr4 (264-316)||(51922961-51923013)
chr4 (225-316)||(54487193-54487285)
chr4 (264-316)||(56241848-56241900)
chr4 (251-317)||(42944897-42944964)
chr4 (301-399)||(21779858-21779954)
chr4 (274-363)||(28658070-28658156)
chr4 (328-404)||(1589670-1589746)
chr4 (264-316)||(13167546-13167598)
chr4 (264-316)||(14054872-14054924)
chr4 (264-316)||(14564159-14564211)
chr4 (264-316)||(26651861-26651913)
chr4 (225-261)||(40286373-40286409)
chr4 (263-315)||(41866176-41866228)
chr4 (264-316)||(46830082-46830134)
chr4 (264-316)||(49136543-49136595)
chr4 (264-316)||(55638768-55638820)
chr4 (265-316)||(6138634-6138685)
chr4 (226-261)||(22694556-22694591)
chr4 (265-316)||(26426129-26426179)
chr4 (226-261)||(28947708-28947743)
chr4 (251-337)||(38306013-38306098)
chr4 (264-315)||(48550239-48550290)
chr4 (251-337)||(54488607-54488692)
chr4 (265-315)||(523172-523222)
chr4 (265-315)||(2175161-2175211)
chr4 (264-310)||(22694610-22694656)
chr4 (248-317)||(33843802-33843872)
chr4 (265-314)||(14076038-14076086)
chr4 (264-317)||(24512223-24512276)
chr4 (251-315)||(28752537-28752601)
chr4 (272-317)||(33574198-33574243)
chr4 (251-316)||(38740302-38740367)
chr4 (264-316)||(6505222-6505274)
chr4 (264-316)||(19592244-19592296)
chr4 (264-316)||(29149320-29149372)
chr4 (251-315)||(29778982-29779046)
chr4 (264-316)||(39187755-39187807)
chr4 (264-316)||(39636806-39636858)
chr4 (264-316)||(43772136-43772188)
chr4 (272-316)||(46926069-46926113)
chr4 (264-316)||(49519751-49519803)
chr4 (225-261)||(54683480-54683516)
[»] chr1 (35 HSPs)
chr1 (251-374)||(40352394-40352516)
chr1 (251-404)||(4346947-4347099)
chr1 (226-404)||(5930733-5930911)
chr1 (249-384)||(47981794-47981927)
chr1 (249-316)||(25061286-25061354)
chr1 (225-323)||(4369777-4369875)
chr1 (330-404)||(7765362-7765436)
chr1 (330-404)||(36447754-36447828)
chr1 (249-403)||(29438560-29438710)
chr1 (276-404)||(7335905-7336032)
chr1 (251-313)||(13344836-13344898)
chr1 (251-316)||(20800277-20800343)
chr1 (251-316)||(35569202-35569268)
chr1 (251-316)||(40229470-40229536)
chr1 (272-312)||(34718515-34718555)
chr1 (226-261)||(4347104-4347139)
chr1 (265-316)||(12468272-12468323)
chr1 (265-316)||(48510968-48511019)
chr1 (249-383)||(33226136-33226268)
chr1 (251-323)||(7826354-7826427)
chr1 (272-316)||(1199887-1199931)
chr1 (264-316)||(15884287-15884339)
chr1 (264-316)||(31223434-31223486)
chr1 (264-316)||(42850233-42850285)
chr1 (279-403)||(43541650-43541772)
chr1 (264-315)||(27801666-27801717)
chr1 (265-316)||(29759711-29759762)
chr1 (264-316)||(291731-291783)
chr1 (264-312)||(5410703-5410751)
chr1 (264-316)||(10470650-10470701)
chr1 (264-312)||(13056061-13056109)
chr1 (225-316)||(34571084-34571176)
chr1 (220-315)||(47978330-47978426)
chr1 (251-318)||(49178233-49178301)
chr1 (264-316)||(50977354-50977406)
[»] chr7 (35 HSPs)
chr7 (226-404)||(38494186-38494364)
chr7 (265-404)||(20088839-20088977)
chr7 (251-404)||(33936807-33936959)
chr7 (251-403)||(16353399-16353550)
chr7 (251-316)||(39634151-39634217)
chr7 (249-313)||(44274698-44274762)
chr7 (330-404)||(37148675-37148749)
chr7 (264-312)||(36920178-36920226)
chr7 (264-316)||(38230125-38230177)
chr7 (264-316)||(48459767-48459819)
chr7 (226-261)||(33936767-33936802)
chr7 (251-316)||(42752177-42752243)
chr7 (265-382)||(4228539-4228655)
chr7 (264-313)||(10371958-10372007)
chr7 (264-316)||(3342847-3342899)
chr7 (264-316)||(3622460-3622512)
chr7 (264-316)||(3750743-3750795)
chr7 (265-313)||(33746449-33746497)
chr7 (264-316)||(39391137-39391189)
chr7 (225-261)||(43186541-43186577)
chr7 (264-312)||(44967399-44967447)
chr7 (264-315)||(32186998-32187049)
chr7 (264-315)||(41715715-41715766)
chr7 (264-315)||(47217541-47217592)
chr7 (264-314)||(37639489-37639539)
chr7 (251-316)||(15311203-15311268)
chr7 (264-317)||(42740448-42740501)
chr7 (264-317)||(43631696-43631748)
chr7 (264-316)||(9456162-9456213)
chr7 (252-315)||(16079460-16079524)
chr7 (265-317)||(24770912-24770964)
chr7 (251-290)||(37008337-37008377)
chr7 (264-316)||(37562627-37562679)
chr7 (264-316)||(39977609-39977661)
chr7 (264-316)||(47021976-47022028)
[»] scaffold0172 (1 HSPs)
scaffold0172 (251-404)||(15257-15408)
[»] scaffold0009 (1 HSPs)
scaffold0009 (264-404)||(199382-199521)
[»] chr6 (12 HSPs)
chr6 (251-404)||(3605751-3605903)
chr6 (264-316)||(16548175-16548227)
chr6 (264-316)||(33899018-33899070)
chr6 (226-316)||(16442324-16442415)
chr6 (264-317)||(10826126-10826179)
chr6 (264-316)||(29409264-29409316)
chr6 (264-311)||(17830011-17830058)
chr6 (251-312)||(1499996-1500057)
chr6 (264-317)||(5584062-5584114)
chr6 (330-403)||(8551170-8551243)
chr6 (330-363)||(28020528-28020561)
chr6 (264-316)||(21254892-21254943)
[»] scaffold0005 (2 HSPs)
scaffold0005 (272-404)||(219602-219733)
scaffold0005 (264-316)||(253164-253216)
[»] scaffold0184 (1 HSPs)
scaffold0184 (297-404)||(6911-7015)
[»] scaffold0369 (1 HSPs)
scaffold0369 (265-316)||(8485-8536)
[»] scaffold0014 (1 HSPs)
scaffold0014 (276-316)||(118435-118475)
[»] scaffold0217 (1 HSPs)
scaffold0217 (264-315)||(2040-2091)
[»] scaffold0003 (1 HSPs)
scaffold0003 (264-315)||(301562-301613)
[»] scaffold0020 (1 HSPs)
scaffold0020 (251-316)||(138507-138573)
[»] scaffold0983 (1 HSPs)
scaffold0983 (265-314)||(2282-2331)
[»] scaffold0007 (1 HSPs)
scaffold0007 (264-316)||(29136-29187)


Alignment Details
Target: chr8 (Bit Score: 113; Significance: 4e-57; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 225 - 404
Target Start/End: Complemental strand, 39219857 - 39219678
Alignment:
Q  225 tgtgtgtttggttgtgcggtggaaaaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcac 323  Q
    |||||||||||||||||||||||||||||| |||||| | ||||||| ||| |||||||||||||||||||| || ||||||||||||||||||||||||    
T  39219857 tgtgtgtttggttgtgcggtggaaaaaattaattttgatagaattgattttcgttaaaagtgagtttaatatgaagtgatttatgtttggatatcctcac 39219758  T
Q  324 aagcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    || |||||||| |||||||||||||||||||||||||| || || |||||||||||||||||||  ||||||||| |||||    
T  39219757 aa-caaaagtgctttgtatgaaaaatgttgtttggatactcggtgtcaaaattgcttttggatgcataaatgaccgaaatg 39219678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 231 - 404
Target Start/End: Original strand, 37667037 - 37667213
Alignment:
Q  231 tttggttgtgcggtggaaaaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaa 329  Q
    |||||||||||||||| |||||||||||||| | ||||||| ||| ||||||| | |||||||| | ||||||||||| ||||||||| ||||||| |||    
T  37667037 tttggttgtgcggtgggaaaaattgattttgatagaattgattttcgttaaaa-taagtttaatgtgaattgatttatatttggatatactcacaa-caa 37667134  T
Q  330 aagtgatttgtatgaaaaatgttgtttggatattct----gtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    ||||| |||||||||||||| ||||||||||| |||    || |||||||||||||||||| |||||||||||||||||    
T  37667135 aagtgttttgtatgaaaaatattgtttggatactctctcggtgtcaaaattgcttttggatatgtaaatgaccaaaatg 37667213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 265 - 404
Target Start/End: Complemental strand, 19649281 - 19649143
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattc 364  Q
    |||||| |||||||||||||||||| ||| |||| ||||||||||||||||| | ||| || ||||||||||||||||||||||| |||||||||| ||     
T  19649281 aattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggataccttcaaaa-caaaagtgatttgtatgaaaaattttgtttggatgttt 19649183  T
Q  365 tgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    ||  ||| |||||||||| ||||| |||| |||| |||||    
T  19649182 tgagtcagaattgcttttagatgtataaaagacctaaatg 19649143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 251 - 403
Target Start/End: Complemental strand, 33588829 - 33588681
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    ||||||||| || ||||||| |||| ||||||||||||||||| |||| | ||||||||||||||| | |||| | |||||||||||||| | ||| |      
T  33588829 aattgatttagtagaattgattttgattaaaagtgagtttaatgtaaaattatttatgtttggataccttcacca-caaaagtgatttgtttaaaata-- 33588733  T
Q  351 ttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaat 403  Q
     |||||||||||  |||  |||||||| |||||| ||| |||||||| |||||    
T  33588732 -tgtttggatatattgtgacaaaattgattttgggtgtttaaatgactaaaat 33588681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 27074313 - 27074366
Alignment:
Q  13 aatatactgcgtaggttgtcgaccccatggcaactctagtatgtgattttcatg 66  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27074313 aataaactgcgtaggttgtcgagcccatggcaactctagtatgtgattttcatg 27074366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 251 - 404
Target Start/End: Original strand, 41891819 - 41891971
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    |||||||||||| ||||||| ||| |||| ||||||||| |  | |||||||||| |||||||||| | || |   ||||| |||||| ||| ||| |||    
T  41891819 aattgattttgtagaattgattttagttagaagtgagttgagcaaaaattgatttgtgtttggataac-tccctgacaaaaatgatttatataaaatatg 41891917  T
Q  351 ttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    ||||||||| | | || |||||||||| |||||||||||||||| || ||||||    
T  41891918 ttgtttggacagtttgaatcaaaattgattttggatgtgtaaattactaaaatg 41891971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 323
Target Start/End: Original strand, 3097219 - 3097278
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcac 323  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||| |||||    
T  3097219 gaattgattttggttaaaagtgagtttgatatgaattgatttatgtttggatatactcac 3097278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 390
Target Start/End: Complemental strand, 29970911 - 29970773
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    |||||| |||||  |||||| ||| |||||||||||||| | | |||| ||||||||||||||||| | | ||||   ||| ||||||||||||||||||    
T  29970911 aattgaatttgtataattgattttagttaaaagtgagttgagtttaaagtgatttatgtttggatacctttacaatagaaa-tgatttgtatgaaaaatg 29970813  T
Q  351 ttgtttggatattctgtatcaaaattgcttttggatgtgt 390  Q
    || |||| ||||| | | | |||||||||||||| |||||    
T  29970812 ttatttgaatattttatgttaaaattgcttttgggtgtgt 29970773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 400
Target Start/End: Complemental strand, 35239507 - 35239434
Alignment:
Q  327 caaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaa 400  Q
    |||||||||||| |||||||| || | |||||||||| || || | ||||||||||||||||||||||||||||    
T  35239507 caaaagtgatttttatgaaaattgatttttggatattttgcattagaattgcttttggatgtgtaaatgaccaa 35239434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 20190250 - 20190186
Alignment:
Q  249 aaaattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttgg 313  Q
    |||||||||||||   |||||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  20190250 aaaattgattttgcataattgattttggttaaaagtgagtttaagataaaatgatttatgtttgg 20190186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 382
Target Start/End: Complemental strand, 36779500 - 36779370
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    |||||||||||| ||||||| |||| ||||||||||||| ||| |||| | ||||||||||||||||  | | ||  ||||||||||  ||| |||| ||    
T  36779500 aattgattttgtagaattgattttgattaaaagtgagttgaatgtaaagtaatttatgtttggatattttta-aattaaaagtgattcatataaaaattg 36779402  T
Q  351 ttgtttggatattctgtatcaaaattgctttt 382  Q
    || |||||||  | | ||||||||||||||||    
T  36779401 ttatttggatcatatatatcaaaattgctttt 36779370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 26243220 - 26243167
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatat 317  Q
    ||||||| ||| ||||||||||||||| |||| |||||||||||||||||||||    
T  26243220 gaattgatttttgttaaaagtgagtttgatatgaattgatttatgtttggatat 26243167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 404
Target Start/End: Complemental strand, 41408299 - 41408147
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    |||| ||||||| ||||||| ||| |||| |||||| || || | |||| ||||||| |||||||| |||| | | |||||||||||| ||| ||| |||    
T  41408299 aattaattttgtagaattgattttagttagaagtgaattgaacaaaaatagatttatatttggata-cctccctaacaaaagtgatttatataaaatatg 41408201  T
Q  351 ttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    ||||||| ||| | |  |||||||||| |||| | ||||||| |||| ||||||    
T  41408200 ttgtttgaatagtttaaatcaaaattgattttaggtgtgtaagtgactaaaatg 41408147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 22936806 - 22936858
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||| ||| | ||||||||||||||||||||    
T  22936806 gaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggata 22936858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 316
Target Start/End: Complemental strand, 26491045 - 26490977
Alignment:
Q  249 aaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||||| | ||||||| |||||||||||||||||| | | ||||||||||| ||||||||||    
T  26491045 aaaattgattttggtagaattgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 26490977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 404
Target Start/End: Complemental strand, 35550330 - 35550177
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    ||||||||||||  |||||| |||  | ||||||||||||| | |||| |||||| |||||||||  | ||| | | | ||||||||  || |||| |||    
T  35550330 aattgattttgtaaaattgatttttatcaaaagtgagtttagtgtaaagtgatttttgtttggatg-cttcata-gtagaagtgattgatacgaaagatg 35550233  T
Q  351 ttgtttggatattctgtatcaaaattgctttt--ggatgtgtaaatgaccaaaatg 404  Q
    ||||||||||||| ||| ||||||||||||||  |||| ||||||| |||||||||    
T  35550232 ttgtttggatattttgtgtcaaaattgcttttggggatatgtaaattaccaaaatg 35550177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 39210940 - 39211003
Alignment:
Q  246 gaaaaaattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttg 312  Q
    ||||||||||||||||| ||||||| |||||||||||   |||| |||||||| |||||||||||||    
T  39210940 gaaaaaattgattttgtagaattgattttggttaaaa---agttgaatataaagtgatttatgtttg 39211003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 261
Target Start/End: Complemental strand, 19649306 - 19649271
Alignment:
Q  226 gtgtgtttggttgtgcggtggaaaaaattgattttg 261  Q
    ||||||||||||||||||||||||||||||||||||    
T  19649306 gtgtgtttggttgtgcggtggaaaaaattgattttg 19649271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 337
Target Start/End: Original strand, 31246314 - 31246399
Alignment:
Q  251 aattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatt 337  Q
    ||||||||||||  ||||||| ||| |||||||||||||| ||| | |||||||||||||||||||| ||| | ||||||||||||||    
T  31246314 aattgattttgttagaattgatttttgttaaaagtgagttgaatgtgaattgatttatgtttggata-cctta-aagcaaaagtgatt 31246399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 38715209 - 38715295
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgattt 338  Q
    |||||||||||  ||||||| ||| ||||||| |||||| | | |||| |||||||||||||| |||| |||||| ||||||||||||    
T  38715209 aattgattttgcagaattgattttagttaaaattgagttaagtgtaaagtgatttatgtttggttatcttcacaa-caaaagtgattt 38715295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 43550986 - 43550935
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||| |||||||||||||||||| ||| | ||||||||||||||||||||    
T  43550986 aattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggata 43550935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 311
Target Start/End: Original strand, 10552923 - 10552969
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgttt 311  Q
    |||||| |||||||||||||||||| ||| |||||||||||||||||    
T  10552923 aattgattttggttaaaagtgagttgaatgtaaattgatttatgttt 10552969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 28425471 - 28425537
Alignment:
Q  251 aattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||||  ||||||| ||||||||||||||||||| |  | ||||||||||||||||||||    
T  28425471 aattgattttgttagaattgattttggttaaaagtgagtttgaggtgaattgatttatgtttggata 28425537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 3467629 - 3467576
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatat 317  Q
    ||||||| |||||||||||||||||| ||| | ||||||||| |||||||||||    
T  3467629 gaattgattttggttaaaagtgagttgaatgtgaattgatttctgtttggatat 3467576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 12124809 - 12124881
Alignment:
Q  330 aagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaa 402  Q
    |||||||||  ||||||||||||||| | ||||| | | ||||||||| |||||| ||||||||||| |||||    
T  12124809 aagtgatttacatgaaaaatgttgttcgaatattttatgtcaaaattgattttggttgtgtaaatgatcaaaa 12124881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 403
Target Start/End: Original strand, 15115682 - 15115781
Alignment:
Q  303 tttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaa 402  Q
    |||||||||||||||| | ||||  | |||||||||||||  |||||||||||||||||   ||| |||||||||||||| | |  | ||||||||||||    
T  15115682 tttatgtttggatatctttacaaa-agaagtgatttgtatataaaatgttgtttggatacagtgtgtcaaaattgcttttaggtacgcaaatgaccaaaa 15115780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 38516407 - 38516343
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggat 315  Q
    |||||||||||| ||||||| ||| | ||| |||||||| ||| |||| ||||||||||||||||    
T  38516407 aattgattttgtagaattgattttcgataatagtgagttgaatgtaaagtgatttatgtttggat 38516343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 40742220 - 40742168
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||  || | ||||||||||||||||||||    
T  40742220 gaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggata 40742168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 40742308 - 40742360
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||| ||||||||||||||| || | ||||||||||||||||||||    
T  40742308 gaattgattttcgttaaaagtgagtttgatctgaattgatttatgtttggata 40742360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 15206791 - 15206740
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||| ||||| |||||||||||| ||| | ||||||||||||||||||||    
T  15206791 aattgattttgggtaaaagtgagttgaatgtgaattgatttatgtttggata 15206740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 42149100 - 42149049
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||| ||||||||||||||||||| |  | ||||||||||||||||||||    
T  42149100 aattgattttggttaaaagtgagtttgaggtgaattgatttatgtttggata 42149049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 316
Target Start/End: Complemental strand, 1373148 - 1373083
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||||  |||||| ||||| |||||||||||| ||  | || |||||||||||||||||    
T  1373148 aattgattttgtaaaattgattttggataaaagtgagttgaagttgaagtgatttatgtttggata 1373083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 440202 - 440254
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||| |||||||  || | ||||||||||||||||||||    
T  440202 gaattgattttggttaaatgtgagttggatgtgaattgatttatgtttggata 440254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 4941794 - 4941846
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| |||||||||||||| |  | ||||||||||||||||||||    
T  4941794 gaattgattttgattaaaagtgagtttgaggtgaattgatttatgtttggata 4941846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 6399121 - 6399173
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| | ||||||||||||||||| || | ||||||||||||||| ||||    
T  6399121 gaattgattatggttaaaagtgagtttgatgtgaattgatttatgtttcgata 6399173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 23018192 - 23018140
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| | ||||||||||| | |||||||| |||||||||||||||    
T  23018192 gaattgattttgatcaaaagtgagttgagtataaatttatttatgtttggata 23018140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 316
Target Start/End: Original strand, 30081648 - 30081715
Alignment:
Q  249 aaaattgattttgtggaa-ttgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||||||| || |||| ||| |||||||||||||| ||  | ||||||||||||||||||||    
T  30081648 aaaattgattttgtgaaaattgattttagttaaaagtgagttaaag-tgaattgatttatgtttggata 30081715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 2e-50; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 251 - 404
Target Start/End: Complemental strand, 44225666 - 44225514
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    |||||||||||| ||||||| ||| |||||||||||||||||| |||| ||||||||||||||||| |||||||| |||||||| |||||||||||||||    
T  44225666 aattgattttgtagaattgattttcgttaaaagtgagtttaatgtaaagtgatttatgtttggataccctcacaa-caaaagtgctttgtatgaaaaatg 44225568  T
Q  351 ttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    ||||||||||| ||  | ||||||||||||||||||||||||||||||||||||    
T  44225567 ttgtttggatactcgatgtcaaaattgcttttggatgtgtaaatgaccaaaatg 44225514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 227 - 403
Target Start/End: Original strand, 10852688 - 10852864
Alignment:
Q  227 tgtgtttggttgtgcggtggaaaaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaa 325  Q
    ||||||||||||||||||||||||||||||||||| |  |||||| |||||||||||||||||| ||| |||| |||||||||||||| || ||||  ||    
T  10852688 tgtgtttggttgtgcggtggaaaaaattgattttggtataattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggcta-cctccaaa 10852786  T
Q  326 gcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaat 403  Q
     |||||||||||| ||||||||||||| ||||||| || ||  ||| ||||||||||  ||||||||| |||||||||    
T  10852787 acaaaagtgatttatatgaaaaatgttatttggatgttttgagtcagaattgcttttaaatgtgtaaaagaccaaaat 10852864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 251 - 397
Target Start/End: Complemental strand, 25181311 - 25181166
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    |||||||||||| ||||||| |||| ||||||||||||||||| |||| | ||||||||||||||| | |||| | |||||||||||||| | ||| |||    
T  25181311 aattgattttgtagaattgattttgattaaaagtgagtttaatgtaaaattatttatgtttggataccttcacca-caaaagtgatttgtttaaaatatg 25181213  T
Q  351 ttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgac 397  Q
    ||||||||||||| ||| ||||||||| |||||| ||| ||||||||    
T  25181212 ttgtttggatattttgtgtcaaaattgattttgggtgtttaaatgac 25181166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 226 - 404
Target Start/End: Complemental strand, 7012767 - 7012591
Alignment:
Q  226 gtgtgtttggttgtgcggtggaaaaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcaca 324  Q
    ||||||||| ||||| ||||||||||||| |||||| | ||||||| |||||||||||||||||| ||| |||| ||||||||||||||||| | ||| |    
T  7012767 gtgtgtttgattgtgtggtggaaaaaattaattttggtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggataccttcaaa 7012668  T
Q  325 agcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    || ||||||||||||||| |||||  |||||||||| || ||  |   |||| ||||| |||||||||| ||||||||||    
T  7012667 ag-aaaagtgatttgtataaaaaaatttgtttggatgttttgagt--gaattacttttagatgtgtaaaagaccaaaatg 7012591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 226 - 404
Target Start/End: Complemental strand, 23918969 - 23918791
Alignment:
Q  226 gtgtgtttggttgtgcggtggaaaaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcaca 324  Q
    |||||||||| |||||||||||||||||| |||||| | ||||| | |||||||||||||||||| ||| |||| |||||||||||||| || |||   |    
T  23918969 gtgtgtttggctgtgcggtggaaaaaattaattttggtagaattaattttggttaaaagtgagttgaatgtaaagtgatttatgtttggtta-cctttaa 23918871  T
Q  325 agcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    | ||||||||||||  ||||||||||||||| |||| || ||   || ||||||||||  ||||||||| ||||||||||    
T  23918870 aacaaaagtgatttagatgaaaaatgttgttaggatgttttgaggcagaattgcttttaaatgtgtaaaagaccaaaatg 23918791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 251 - 404
Target Start/End: Complemental strand, 52736865 - 52736713
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    |||||||||| | ||| ||| |||| ||||||||||| |||||  ||| |||||| ||||||||||   | ||||  ||||||||||||||||||| |||    
T  52736865 aattgattttatagaagtgattttgattaaaagtgaggttaatgaaaagtgatttgtgtttggatacttttacaat-aaaagtgatttgtatgaaatatg 52736767  T
Q  351 ttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    |||||| |||||| ||| |||||||||||||||| ||||||||||| |||||||    
T  52736766 ttgtttagatattttgtgtcaaaattgcttttggttgtgtaaatgatcaaaatg 52736713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 226 - 383
Target Start/End: Complemental strand, 46864420 - 46864264
Alignment:
Q  226 gtgtgtttggttgtgcggtggaaaaaattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaa 325  Q
    ||||||||||||  | |||||  |||||||||||||  ||||||| ||||||||||||||| ||||| ||||| || |||||||||| ||| | ||| ||    
T  46864420 gtgtgtttggttacgtggtggcgaaaattgattttgcagaattgattttggttaaaagtgattttaacataaagtggtttatgtttgtataccttca-aa 46864322  T
Q  326 gcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttg 383  Q
    |||||| ||||||||||| || ||| |||||| ||||| | | |||||||||||||||    
T  46864321 gcaaaattgatttgtatgtaagatgatgtttgaatattttatgtcaaaattgcttttg 46864264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 403
Target Start/End: Original strand, 30301202 - 30301338
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatatt 363  Q
    ||||||| |||| ||||||||||||| ||| || | ||| ||||||||||||  | ||| ||  | ||||||||||||||||| ||||||||||||||||    
T  30301202 gaattgattttgattaaaagtgagttgaatgtatagtgaattatgtttggatcccttcataat-agaagtgatttgtatgaaagatgttgtttggatatt 30301300  T
Q  364 ctgtatcaaaattgcttttggatgtgtaaatgaccaaaat 403  Q
     |||  ||||||||||||||| ||||||||||||||||||    
T  30301301 gtgt--caaaattgcttttgggtgtgtaaatgaccaaaat 30301338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 265 - 401
Target Start/End: Complemental strand, 42644349 - 42644215
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattc 364  Q
    |||||| ||| |||||||||||||| ||| |||| ||||||||||||||||||  | | ||  |||| ||||||||| |||||||||||||||||||||     
T  42644349 aattgattttagttaaaagtgagttgaatgtaaagtgatttatgtttggatatttt-ataataaaaa-tgatttgtaggaaaaatgttgtttggatattt 42644252  T
Q  365 tgtatcaaaattgcttttggatgtgtaaatgaccaaa 401  Q
    ||| | ||||||| |||||| ||||||||||||||||    
T  42644251 tgtgttaaaattgtttttgggtgtgtaaatgaccaaa 42644215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 10853280 - 10853406
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatga-aaaatgttgtttggatat 362  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    ||||||||||  |||||    ||||||||||||||     
T  10853280 gaattgattttggttaaaagtgagtttaatataaattgatttatgtttggatatactcac--ttaaaagtgattcttatgagttgatgttgtttggatag 10853377  T
Q  363 tctgtatcaaaattgcttttggatgtgta 391  Q
    | || |||||||||| ||||| |||||||    
T  10853378 tttgaatcaaaattgattttgaatgtgta 10853406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 251 - 404
Target Start/End: Complemental strand, 53078459 - 53078307
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    |||| ||||||| ||||||| ||| |||| || |||||| || | ||||||||||||||||||||| | || | | |||||||||||| ||| ||| |||    
T  53078459 aattaattttgtagaattgattttagttagaaatgagttgaacaaaaattgatttatgtttggataac-tccctaacaaaagtgatttatataaaatatg 53078361  T
Q  351 ttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    ||||||||| | | || |||||||||| |||||||||||||||| || ||||||    
T  53078360 ttgtttggacagtttgaatcaaaattgattttggatgtgtaaattactaaaatg 53078307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 401
Target Start/End: Complemental strand, 32901944 - 32901871
Alignment:
Q  328 aaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaa 401  Q
    |||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||| ||||| ||||||||||    
T  32901944 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtgaatgaccaaa 32901871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 328 - 404
Target Start/End: Original strand, 50671880 - 50671956
Alignment:
Q  328 aaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    |||||||||||  ||||||||||||||||||||||| ||||| ||||||| |||||| ||||||||||| |||||||    
T  50671880 aaaagtgatttacatgaaaaatgttgtttggatattttgtattaaaattgattttggttgtgtaaatgatcaaaatg 50671956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 226 - 404
Target Start/End: Original strand, 29252099 - 29252273
Alignment:
Q  226 gtgtgtttggttgtgcggtggaaaaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcaca 324  Q
    |||||||||||| ||| | || |||||||||||||| | ||||||| |||| | ||||||||||| | | ||||||||||||||||||  |  | ||| |    
T  29252099 gtgtgtttggttctgcagcggtaaaaattgattttgattgaattgattttgatcaaaagtgagttaattgtaaattgatttatgtttgcctg-cttcaaa 29252197  T
Q  325 agcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    |    ||||||||| ||||||| |||||||||| | ||| ||  |||||||||||||||||| ||||||| |||||||||    
T  29252198 a----aagtgatttatatgaaagatgttgtttgaaaattttgcgtcaaaattgcttttggatatgtaaattaccaaaatg 29252273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 53179935 - 53179884
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||| ||||||||||||||||||| || ||||||||||||||||||||||    
T  53179935 aattgattttggttaaaagtgagtttgatgtaaattgatttatgtttggata 53179884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 327 - 377
Target Start/End: Original strand, 32932188 - 32932238
Alignment:
Q  327 caaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattg 377  Q
    |||||||||||||||||||| |||||||||||||||| ||| |||||||||    
T  32932188 caaaagtgatttgtatgaaatatgttgtttggatattttgtgtcaaaattg 32932238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 10334226 - 10334174
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||| |||| ||||| ||||||||||||||||||||    
T  10334226 gaattgattttggttaaaagtcagttgaatatgaattgatttatgtttggata 10334174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 21225078 - 21225026
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||| || ||||||||| ||||||||||||    
T  21225078 gaattgattttggttaaaagtgagtttgatgtaaattgatatatgtttggata 21225026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 23496405 - 23496353
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||| ||| | ||||||||||||||||||||    
T  23496405 gaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggata 23496353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 25848112 - 25848068
Alignment:
Q  272 tttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  25848112 tttggtaaaaagtgagtttaatatgaattgatttatgtttggata 25848068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 312
Target Start/End: Complemental strand, 41459319 - 41459255
Alignment:
Q  249 aaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttg 312  Q
    ||||||||||||| | ||||||| ||||||||||||||| || || |||||||||||||||||||    
T  41459319 aaaattgattttgattgaattgactttggttaaaagtgatttgaagataaattgatttatgtttg 41459255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 50664846 - 50664794
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||| ||| | ||||||||||||||||||||    
T  50664846 gaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggata 50664794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 316
Target Start/End: Complemental strand, 31084334 - 31084243
Alignment:
Q  226 gtgtgtttggttgtgcggtggaaaaaattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||||  |||||||  | |||||||||||   ||||||| |||| ||||||||||||| ||| | ||||||||||||||||||||    
T  31084334 gtgtgtttggtttggcggtggcgagaattgattttgaaagaattgattttgattaaaagtgagttgaatgtgaattgatttatgtttggata 31084243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 44224849 - 44224798
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  44224849 aattgattatggttaaaagtgagtttgatatgaattgatttatgtttggata 44224798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 316
Target Start/End: Original strand, 52931586 - 52931637
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||| ||| |||||||||||||||| | ||||||||||||||||||||||    
T  52931586 aattgattttagttaaaagtgagtttagtgtaaattgatttatgtttggata 52931637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 403
Target Start/End: Complemental strand, 53567940 - 53567881
Alignment:
Q  344 aaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaat 403  Q
    |||||| ||||||||||||| ||| |||||||||||||| | | ||||||||||||||||    
T  53567940 aaaaatattgtttggatattttgtgtcaaaattgcttttcgttatgtaaatgaccaaaat 53567881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 403
Target Start/End: Original strand, 21023229 - 21023366
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattc 364  Q
    |||||| |||||||||| ||||||| ||| | || |||||||||||| ||||   ||| || || ||||||||| |||||||| |   |||||||||||     
T  21023229 aattgattttggttaaatgtgagttgaatttgaagtgatttatgtttagatactttcaaaa-cagaagtgatttttatgaaaactagcgtttggatattt 21023327  T
Q  365 tgtatcaaaattgcttttggatgtgtaaatgaccaaaat 403  Q
    |||||   |||||||||||| ||||| || |||||||||    
T  21023328 tgtatttgaattgcttttgggtgtgtgaaagaccaaaat 21023366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 19877505 - 19877452
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatat 317  Q
    ||||||| ||||||||||||||||||  || ||||||||||||||||| |||||    
T  19877505 gaattgattttggttaaaagtgagttggatgtaaattgatttatgtttagatat 19877452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 38340893 - 38340840
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatat 317  Q
    ||||||| ||||||||||||||||||  || | |||||||||||||||||||||    
T  38340893 gaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggatat 38340840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 52966808 - 52966881
Alignment:
Q  251 aattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcac 323  Q
    ||||||||||| | ||||||| ||||||||||||||| ||| || | ||||||||||||||||| || ||||||    
T  52966808 aattgattttgagagaattgattttggttaaaagtgactttgatgtgaattgatttatgtttgggtaccctcac 52966881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 3348331 - 3348279
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||| |||||||||  || ||||||||||||||||||||||    
T  3348331 gaattgattttggttagaagtgagttggatgtaaattgatttatgtttggata 3348279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 4984668 - 4984617
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||| ||||||||||||||||||  || | ||||||||||||||||||||    
T  4984668 aattgattttggttaaaagtgagttagatgtgaattgatttatgtttggata 4984617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 316
Target Start/End: Original strand, 23207082 - 23207133
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||| ||||||||||| ||||||| || | ||||||||||||||||||||    
T  23207082 aattgattttggttaaaaatgagtttgatgtgaattgatttatgtttggata 23207133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 29716699 - 29716742
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttat 307  Q
    ||||||| |||||||||||||||||| ||||| |||||||||||    
T  29716699 gaattgattttggttaaaagtgagttaaatatgaattgatttat 29716742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 308
Target Start/End: Original strand, 30809959 - 30810002
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatg 308  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||    
T  30809959 aattgagtttggttaaaagtgagttaaatgtgaattgatttatg 30810002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 34561195 - 34561144
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||| |||||||||||||||||| |||   ||||||||||||||||||||    
T  34561195 aattgattttggttaaaagtgagttgaatgcgaattgatttatgtttggata 34561144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 316
Target Start/End: Original strand, 49526667 - 49526734
Alignment:
Q  250 aaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||||||||| | ||||||| |||| |||||||||| || | | ||||||||||||||||||||||    
T  49526667 aaattgattttgatagaattgattttgattaaaagtgaattgattgtaaattgatttatgtttggata 49526734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 314
Target Start/End: Original strand, 16246107 - 16246157
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttgga 314  Q
    ||||||| ||| ||||||||||||||  || ||||||||||||||||||||    
T  16246107 gaattgattttagttaaaagtgagttagatgtaaattgatttatgtttgga 16246157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 392
Target Start/End: Complemental strand, 20813234 - 20813107
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatga-aaaatgttgtttggatat 362  Q
    |||||| |||||||||||||||||||  || | ||||||||| ||||||||||| ||   |  |||||||||||  |||||    ||||||||||||||     
T  20813234 gaattgtgtttggttaaaagtgagttggatttgaattgatttttgtttggatatact--tattcaaaagtgattcttatgagttgatgttgtttggatag 20813137  T
Q  363 tctgtatcaaaattgcttttggatgtgtaa 392  Q
    | || |||||||||| ||||| ||||||||    
T  20813136 tttgaatcaaaattgattttgaatgtgtaa 20813107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 405
Target Start/End: Original strand, 52931827 - 52931905
Alignment:
Q  327 caaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatga 405  Q
    ||||| |||||| ||| | | |||||||||||||| | ||| ||||||||  ||||| |||||||||| ||||||||||    
T  52931827 caaaaatgatttatataatatatgttgtttggatactttgtgtcaaaattaattttgaatgtgtaaattaccaaaatga 52931905  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 14651099 - 14651167
Alignment:
Q  249 aaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatat 317  Q
    ||||||||||||| | ||||||| |||| ||||||||||||| ||||| ||||||||| ||||| |||||    
T  14651099 aaaattgattttgatagaattgattttgattaaaagtgagttgaatat-aattgatttgtgttttgatat 14651167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 31766175 - 31766240
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||||  |||| | ||||| |||||||||||| ||  |||| |||||||||||||||||    
T  31766175 aattgattttgtaaaattaattttggataaaagtgagttgaagttaaagtgatttatgtttggata 31766240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 403
Target Start/End: Complemental strand, 4486830 - 4486762
Alignment:
Q  335 atttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaat 403  Q
    ||||| ||||||||| |||| |||||||| ||| | | |||||||||| | ||||||||||| ||||||    
T  4486830 atttgcatgaaaaatattgtgtggatattttgtgtaacaattgctttttggtgtgtaaatgatcaaaat 4486762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 15511389 - 15511441
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||   | | ||||||||||||||||||||    
T  15511389 gaattgattttggttaaaagtgagttgggtgtgaattgatttatgtttggata 15511441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 26519752 - 26519700
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| | ||||||||||| ||| | ||||||||||||||||||||    
T  26519752 gaattgattttgctaaaaagtgagttgaatgtgaattgatttatgtttggata 26519700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 35930826 - 35930774
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||  |||||||||||||| |||| |||||||||||| |||||||    
T  35930826 gaattgatttttattaaaagtgagtttgatatgaattgatttatgcttggata 35930774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 38172320 - 38172372
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||   || | ||||||||||||||||||||    
T  38172320 gaattgattttggttaaaagtgagtgggatgtgaattgatttatgtttggata 38172372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 44939429 - 44939480
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| ||||||||||||| ||||| |||||| |||||||||||||    
T  44939429 gaattgattttgattaaaagtgagttgaatatgaattga-ttatgtttggata 44939480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 48189455 - 48189506
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| ||||||||||||| ||| |||||||| |||||||||||||    
T  48189455 gaattgattttgattaaaagtgagttgaatgtaaattga-ttatgtttggata 48189506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 316
Target Start/End: Complemental strand, 51285754 - 51285662
Alignment:
Q  225 tgtgtgtttggttgtgcggtggaaaaaattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||||| |||||||  |||||||||||||| | ||||| | | ||| |||||||||||| ||| |||| | ||| ||| |||||||    
T  51285754 tgtgtgtttggttttgcggtgagaaaaattgattttgagtgaatttattatggctaaaagtgagttgaatgtaaagtaattcatgcttggata 51285662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 6e-50; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 230 - 405
Target Start/End: Original strand, 23359906 - 23360081
Alignment:
Q  230 gtttggttgtgcggtggaaaaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagca 328  Q
    |||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||| ||| |||| ||||||||||||||||| | ||| || ||    
T  23359906 gtttggttgtgcggtggaaaaaattgattttggtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggataccttcaaaa-ca 23360004  T
Q  329 aaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatga 405  Q
    ||||||||| |||||||||||||||||||||| || || |||| |||||||||| |||||||||| |||||||||||    
T  23360005 aaagtgattagtatgaaaaatgttgtttggatgttttgaatcagaattgcttttagatgtgtaaaagaccaaaatga 23360081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 272 - 404
Target Start/End: Complemental strand, 23377593 - 23377462
Alignment:
Q  272 tttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatca 371  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||| | ||| || ||||||||||| |||| ||||||||||||||||| || || ||||    
T  23377593 tttggttaaaagtgagttgaatgtaagttgatttatgtttggataccttcaaaa-caaaagtgattagtataaaaaatgttgtttggatgttttgaatca 23377495  T
Q  372 aaattgcttttggatgtgtaaatgaccaaaatg 404  Q
     |||||||||| |||||||||| ||||||||||    
T  23377494 gaattgcttttagatgtgtaaaagaccaaaatg 23377462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 226 - 404
Target Start/End: Complemental strand, 29844312 - 29844135
Alignment:
Q  226 gtgtgtttggttgtgcggtggaaaaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcaca 324  Q
    ||||||||||||||| |||||||||||||||||||| | ||||||| |||||||||||   |||| ||  |||| |||||||||||||| || | ||| |    
T  29844312 gtgtgtttggttgtgtggtggaaaaaattgattttggtagaattgattttggttaaaaaa-agttgaaggtaaagtgatttatgtttggttaccttcaaa 29844214  T
Q  325 agcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    | |||||||||||||||||||||||||||||||||| || ||  ||| |||| ||||| |||||||||| || |||||||    
T  29844213 a-caaaagtgatttgtatgaaaaatgttgtttggatgttttgagtcataattacttttagatgtgtaaaagatcaaaatg 29844135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 251 - 390
Target Start/End: Complemental strand, 12110984 - 12110847
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    ||||||||||||  |||||| |||||||||||||||||| |||||||| ||||||||||||||||| | ||| || || ||||||||| |||||||| ||    
T  12110984 aattgattttgtcaaattgattttggttaaaagtgagttgaatataaagtgatttatgtttggata-cttca-aaacataagtgatttttatgaaaactg 12110887  T
Q  351 ttgtttggatattctgtatcaaaattgcttttggatgtgt 390  Q
     |||||| ||||| || || | ||||||||||||||||||    
T  12110886 gtgtttgaatattttgcattagaattgcttttggatgtgt 12110847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 249 - 390
Target Start/End: Complemental strand, 1763332 - 1763192
Alignment:
Q  249 aaaattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaa 348  Q
    ||||||||||||||  |||||| ||||||||||| |||||| ||| |||| |||||||||||| |||| | ||| || || ||||||||| ||||||||     
T  1763332 aaaattgattttgtaaaattgattttggttaaaattgagttgaatttaaagtgatttatgtttagataccttca-aaacagaagtgatttttatgaaaac 1763234  T
Q  349 tgttgtttggatattctgtatcaaaattgcttttggatgtgt 390  Q
    || |||||||||||| ||||| | |||||||||||| |||||    
T  1763233 tgatgtttggatattttgtattagaattgcttttgggtgtgt 1763192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 251 - 403
Target Start/End: Complemental strand, 5055279 - 5055128
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    |||| ||||||  ||||||| ||||||||||||||||||||| ||||| || ||| |||||| ||| | ||| | |||||| ||||||||||| || |||    
T  5055279 aattaattttgcagaattgattttggttaaaagtgagtttaacataaagtggtttgtgtttgaataccttca-atgcaaaattgatttgtatgtaagatg 5055181  T
Q  351 ttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaat 403  Q
     |||||||||||| ||| |||||||||||||||   ||| |||||||||||||    
T  5055180 atgtttggatattttgtgtcaaaattgcttttgagcgtggaaatgaccaaaat 5055128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 27911549 - 27911445
Alignment:
Q  219 tcttactgtgtgtttggttgtgcggtggaaaaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatat 317  Q
    ||||| |||||||||||||  |||| ||  | ||||||||||| | ||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  27911549 tcttagtgtgtgtttggttcggcggcggcgataattgattttgatagaattgagtttggttaaaagtgagtttgatgtgaattgatttatgtttggatat 27911450  T
Q  318 cctca 322  Q
     ||||    
T  27911449 actca 27911445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 37543935 - 37543863
Alignment:
Q  332 gtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    |||||||||||||||||||||| ||| || || ||| | ||||||| |||| |||||||||||||||||||||    
T  37543935 gtgatttgtatgaaaaatgttgattgaattttttgtgttaaaattgtttttagatgtgtaaatgaccaaaatg 37543863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 316
Target Start/End: Complemental strand, 3854011 - 3853945
Alignment:
Q  251 aattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||| | ||||||| |||| ||||||||||||| ||| ||||||||||||||||||||||    
T  3854011 aattgattttgatagaattgattttgattaaaagtgagttgaatgtaaattgatttatgtttggata 3853945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 404
Target Start/End: Original strand, 42770415 - 42770544
Alignment:
Q  272 tttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatca 371  Q
    |||| ||||||||||||| |||  |||||||| |||||||||||||| | |  |  ||||||||||  ||||| | |||||||||||||||  ||| |||    
T  42770415 tttgattaaaagtgagttgaatgaaaattgatctatgtttggatatctttaagat-aaaagtgattcttatgagagatgttgtttggatat--tgtgtca 42770511  T
Q  372 aaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    ||||||||||| | | || ||||||||||||||    
T  42770512 aaattgcttttagttatgaaaatgaccaaaatg 42770544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 1945050 - 1945102
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||| ||| | ||||||||||||||||||||    
T  1945050 gaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggata 1945102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 16467182 - 16467130
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatat 317  Q
    |||||| ||||||||||||||||||  || |||||||||||||||||||||||    
T  16467182 aattgattttggttaaaagtgagttagatgtaaattgatttatgtttggatat 16467130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 312
Target Start/End: Original strand, 38600454 - 38600502
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttg 312  Q
    ||||||| ||||||||||||||||||| || ||||||||||||||||||    
T  38600454 gaattgattttggttaaaagtgagtttgatgtaaattgatttatgtttg 38600502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 41580721 - 41580773
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||| || |||||| |||||||||||||||    
T  41580721 gaattgattttggttaaaagtgagtttgatgtaaattaatttatgtttggata 41580773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 2215349 - 2215297
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||| |  | ||||||||||||||||||||    
T  2215349 gaattgattttggttaaaagtgagtttgaggtgaattgatttatgtttggata 2215297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 7296252 - 7296200
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||| ||||||| || | ||||||||||||||||||||    
T  7296252 gaattgattttggttaaaaatgagtttgatgtgaattgatttatgtttggata 7296200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 316
Target Start/End: Complemental strand, 18511215 - 18511147
Alignment:
Q  249 aaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||||| |  |||||| ||||||||||||||| || ||| | ||||||||||||||||||||    
T  18511215 aaaattgattttgatataattgattttggttaaaagtgatttaaatgttaattgatttatgtttggata 18511147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 34433317 - 34433369
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| ||||||||||||| ||| | ||||||||||||||||||||    
T  34433317 gaattgattttgattaaaagtgagttgaatgtgaattgatttatgtttggata 34433369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 39106680 - 39106732
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||| |||||||||||| |||||||||| || |||||||||||    
T  39106680 gaattgattttggtaaaaagtgagtttgatataaattgtttaatgtttggata 39106732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 42089539 - 42089591
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| ||||||||||||| ||| | ||||||||||||||||||||    
T  42089539 gaattgattttgattaaaagtgagttgaatgtgaattgatttatgtttggata 42089591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 10918700 - 10918649
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggat 315  Q
    ||||||| ||||| |||||||||||| ||| |||| ||||||||||||||||    
T  10918700 gaattgattttggataaaagtgagttgaatgtaaagtgatttatgtttggat 10918649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 405
Target Start/End: Original strand, 37531903 - 37531974
Alignment:
Q  334 gatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatga 405  Q
    ||||||||||||  || |||||| |||||| ||| ||||||||| |||| | ||| ||||||||||||||||    
T  37531903 gatttgtatgaatgatattgtttagatattttgtgtcaaaattgattttcgttgtataaatgaccaaaatga 37531974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 368
Target Start/End: Complemental strand, 6737659 - 6737621
Alignment:
Q  330 aagtgatttgtatgaaaaatgttgtttggatattctgta 368  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  6737659 aagtgatttgtatgaaaaatattgtttggatattgtgta 6737621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 30007572 - 30007613
Alignment:
Q  272 tttggttaaaagtgagtttaatataaattgatttatgtttgg 313  Q
    |||||||||||||||||| ||| | |||||||||||||||||    
T  30007572 tttggttaaaagtgagttgaatgtgaattgatttatgtttgg 30007613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 31224777 - 31224724
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatat 317  Q
    ||||||| ||| ||||||||||||||  || | |||||||||||||||||||||    
T  31224777 gaattgattttagttaaaagtgagttggatgtgaattgatttatgtttggatat 31224724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 2213603 - 2213551
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| | ||||||||||| ||| | ||||||||||||||||||||    
T  2213603 gaattgattttgctaaaaagtgagttgaatgtgaattgatttatgtttggata 2213551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 2213744 - 2213692
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||| || | ||||||||| | ||||||||    
T  2213744 gaattgattttggttaaaagtgagtttgatgtgaattgatttgtctttggata 2213692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 3853914 - 3853870
Alignment:
Q  348 atgttgtttggatattctgtatcaaaattgcttttggatgtgtaa 392  Q
    |||||||||||||| | || |||||||||||||||| ||||||||    
T  3853914 atgttgtttggatagtttgaatcaaaattgcttttgaatgtgtaa 3853870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 5916253 - 5916304
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||| ||| | |||||| |||||||||||||    
T  5916253 gaattgattttggttaaaagtgagttgaatgtgaattga-ttatgtttggata 5916304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 7295359 - 7295411
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| | ||||||||| ||||||| |  ||||||||||||||||||||||    
T  7295359 gaattgattctggttaaaaatgagtttgacgtaaattgatttatgtttggata 7295411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 7472685 - 7472736
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||| || | |||||| |||||||||||||    
T  7472685 gaattgattttggttaaaagtgagtttgatgtgaattga-ttatgtttggata 7472736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 403
Target Start/End: Original strand, 7741102 - 7741224
Alignment:
Q  279 aaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgc 378  Q
    ||||||||||| || || || ||| ||||||||||||| ||| | |||   ||||||||| ||| ||| |||||||||||||| | ||  | ||||||||    
T  7741102 aaaagtgagttgaaaatgaaatgagttatgtttggata-ccttaaaagtgtaagtgatttatatcaaatatgttgtttggataatttgact-aaaattgc 7741199  T
Q  379 ttttggatgtgtaaatgaccaaaat 403  Q
    |||||  ||||||||| ||||||||    
T  7741200 ttttgagtgtgtaaattaccaaaat 7741224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 8170409 - 8170358
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| ||||||||||||| ||| |||||||| |||||||||||||    
T  8170409 gaattgattttgattaaaagtgagttgaatgtaaattga-ttatgtttggata 8170358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 9988512 - 9988564
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||| ||||||||||||||  || | ||||||||||||||||||||    
T  9988512 gaattgatttttgttaaaagtgagttggatgtgaattgatttatgtttggata 9988564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 403
Target Start/End: Original strand, 14532042 - 14532094
Alignment:
Q  351 ttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaat 403  Q
    |||||||| ||||  || ||||||||| |||||| ||||||||||||||||||    
T  14532042 ttgtttgggtatttcgtgtcaaaattgtttttggttgtgtaaatgaccaaaat 14532094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 14821259 - 14821208
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||| |||||||||||||||||| | |||||| |||||||||||||    
T  14821259 gaattgattttagttaaaagtgagtttaatgtgaattga-ttatgtttggata 14821208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 254
Target Start/End: Complemental strand, 23377625 - 23377597
Alignment:
Q  226 gtgtgtttggttgtgcggtggaaaaaatt 254  Q
    |||||||||||||||||||||||||||||    
T  23377625 gtgtgtttggttgtgcggtggaaaaaatt 23377597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 25747893 - 25747944
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| ||||||||||||| ||| ||| ||||||||||||||||||    
T  25747893 gaattgattttgattaaaagtgagttgaatgtaa-ttgatttatgtttggata 25747944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 28127298 - 28127350
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| | ||||||||||| ||| | ||||||||||||||||||||    
T  28127298 gaattgattttgctaaaaagtgagttgaatgtgaattgatttatgtttggata 28127350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 30599915 - 30599967
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||| | | | ||||||||| ||||||||||    
T  30599915 gaattgattttggttaaaagtgagttgagtgtcaattgatttgtgtttggata 30599967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 36312373 - 36312322
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||| ||| | |||||| |||||||||||||    
T  36312373 gaattgattttggttaaaagtgagttgaatgtgaattga-ttatgtttggata 36312322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 36548296 - 36548244
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| |||||||||||| | || | ||||||||||||||||||||    
T  36548296 gaattgattttgattaaaagtgagtctgatgtgaattgatttatgtttggata 36548244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 39141481 - 39141532
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||    
T  39141481 gaattgattttggttaaaagtgagttggatatgaattga-ttatgtttggata 39141532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 44619072 - 44619124
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||| |    ||||||||||||||||||||    
T  44619072 gaattgattttggttaaaagtgagtttgaggggaattgatttatgtttggata 44619124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 251 - 405
Target Start/End: Complemental strand, 65601 - 65448
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    |||||||| |||| |||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||     
T  65601 aattgattctgtgaaattgattttggttaaaaatgagtttaatgtaaagtgatttatgtttggatatcctcacaa-caaaagtgatttgtatgaaaaata 65503  T
Q  351 ttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatga 405  Q
    ||||||||||| | ||| ||||||||| |||||| ||||||||||||||||||||    
T  65502 ttgtttggatactttgtgtcaaaattgattttgggtgtgtaaatgaccaaaatga 65448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 225 - 404
Target Start/End: Complemental strand, 22811168 - 22810989
Alignment:
Q  225 tgtgtgtttggttgtgcggtggaaaaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcac 323  Q
    ||||| ||||||||||||||||||||||||||| ||| | ||||||| |||||||||||||||||| ||| |||| ||||||||||||||||| | |||     
T  22811168 tgtgtatttggttgtgcggtggaaaaaattgatcttggtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggataccttcaa 22811069  T
Q  324 aagcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    || ||||||||||| ||||||||||||||||||| || || ||  ||| |||||||||| |||||||||| || |||||||    
T  22811068 aa-caaaagtgattagtatgaaaaatgttgtttgcatgttttgagtcagaattgcttttagatgtgtaaaagatcaaaatg 22810989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 276 - 404
Target Start/End: Complemental strand, 3748988 - 3748861
Alignment:
Q  276 gttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaat 375  Q
    |||||||||||||||||| |||| || ||||||||||| || | ||||||    |||| |||||||||||| || |||||||||||||  || |||||||    
T  3748988 gttaaaagtgagtttaatgtaaagtggtttatgtttggttaccttcacaa-ttgaagttatttgtatgaaagattttgtttggatatttggtgtcaaaat 3748890  T
Q  376 tgcttttggatgtgtaaatgaccaaaatg 404  Q
    | ||||||| |||||||||||||||||||    
T  3748889 tacttttgggtgtgtaaatgaccaaaatg 3748861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 251 - 387
Target Start/End: Original strand, 31215372 - 31215506
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    |||||||||  | |||| |||||| |||||||||||||| || | ||||||||| ||||||||||| | |||||| |||||||||||| ||| ||| |||    
T  31215372 aattgatttaatagaatcgagtttagttaaaagtgagttaaacaaaaattgatt-atgtttggataccttcacaa-caaaagtgatttatataaaatatg 31215469  T
Q  351 ttgtttggatattctgtatcaaaattgcttttggatg 387  Q
    ||||| ||||| | || ||||||||||||||||||||    
T  31215470 ttgttcggatagtttgaatcaaaattgcttttggatg 31215506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 404
Target Start/End: Original strand, 43152386 - 43152512
Alignment:
Q  277 ttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaatt 376  Q
    ||||||||||||| |||  ||| ||||||||||||||||| | |  | |  | |||||||||  ||||||||||||||||||||||| ||| ||||||||    
T  43152386 ttaaaagtgagttgaatgaaaagtgatttatgtttggatacctttgcgat-agaagtgatttacatgaaaaatgttgtttggatattttgtgtcaaaatt 43152484  T
Q  377 gcttttggatgtgtaaatgaccaaaatg 404  Q
    | |||||| |||||||||||||||||||    
T  43152485 gattttggttgtgtaaatgaccaaaatg 43152512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 278 - 377
Target Start/End: Original strand, 43045198 - 43045296
Alignment:
Q  278 taaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattg 377  Q
    |||||||||||||| | |||||| |||||||||| |||| | | |  | |||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  43045198 taaaagtgagtttagtgtaaattaatttatgtttagatacctttatta-caaaagtgatttgtatgaaatatgttgtttggatattttgtatcaaaattg 43045296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 251 - 404
Target Start/End: Original strand, 2868350 - 2868502
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    |||| ||||||| ||||||| ||| |||||||||||||| ||| |||| ||||||| |||||||| |  | | || ||||||||||||  || ||| |||    
T  2868350 aattaattttgtagaattgattttagttaaaagtgagttgaatgtaaagtgatttaagtttggatgttttaagaa-caaaagtgatttacattaaagatg 2868448  T
Q  351 ttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
     ||||||||||   || ||||||||||||||| | ||||||||| |||||||||    
T  2868449 gtgtttggatagcttgaatcaaaattgcttttaggtgtgtaaattaccaaaatg 2868502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 404
Target Start/End: Original strand, 32560346 - 32560422
Alignment:
Q  328 aaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    ||||||||||  |||||||||||||||||||||||| ||| |||||||||||||| | | || ||||||||||||||    
T  32560346 aaaagtgattcatatgaaaaatgttgtttggatattttgtgtcaaaattgcttttagttatgaaaatgaccaaaatg 32560422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 249 - 404
Target Start/End: Original strand, 621289 - 621443
Alignment:
Q  249 aaaattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaa 348  Q
    ||||||||||||||  |||||| ||||||||||| | |||| ||| |||| ||||||||| ||||||| | ||| || || ||||||||| ||||||||     
T  621289 aaaattgattttgtaaaattgattttggttaaaattcagttgaatttaaagtgatttatgattggataccttca-aaacagaagtgatttttatgaaaac 621387  T
Q  349 tgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    || |||||||||||  ||||| | ||||| | |||| ||||| || ||| ||||||    
T  621388 tggtgtttggatatgttgtattataattgttgttgggtgtgtgaaagactaaaatg 621443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 3060234 - 3060358
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatatt 363  Q
    ||||||| |||| |||||||||||||| |||| |||| |||||||||||||||| |||||     |||||||||  |||||   |||||||||||||| |    
T  3060234 gaattgattttgattaaaagtgagttttatatgaattaatttatgtttggatatactcac---ttaaagtgattcttatgagttatgttgtttggatagt 3060330  T
Q  364 ctgtatcaaaattgcttttggatgtgta 391  Q
     || |||||||||| ||||| |||||||    
T  3060331 ttgaatcaaaattgattttgaatgtgta 3060358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 316
Target Start/End: Original strand, 40495369 - 40495420
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||| ||||||||||||||||||| || ||||||||||||||||||||||    
T  40495369 aattgattttggttaaaagtgagtttgatgtaaattgatttatgtttggata 40495420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 2483710 - 2483776
Alignment:
Q  251 aattgattttgt-ggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||||||||| |||||||| ||| |||||||||||||| ||| | ||||||||||||||||||||    
T  2483710 aattgattttgttggaattgattttagttaaaagtgagttgaatgtgaattgatttatgtttggata 2483776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 19204079 - 19204153
Alignment:
Q  330 aagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    ||||||||  |||||||||| ||||||||||||| ||| |||||||||||||| | | || ||||||||||||||    
T  19204079 aagtgattcatatgaaaaatattgtttggatattttgtgtcaaaattgcttttagttatgaaaatgaccaaaatg 19204153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 316
Target Start/End: Complemental strand, 22482305 - 22482239
Alignment:
Q  251 aattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||| | ||||||| |||||||||||||||||| ||| | ||||||||||||||||||||    
T  22482305 aattgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggata 22482239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 405
Target Start/End: Complemental strand, 33740966 - 33740847
Alignment:
Q  285 gagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttgg 384  Q
    ||||||||| |||| || |||||||||||||| | | ||||  | |||||||| || || |||  ||||||| |||||| ||| |||||||||| ||| |    
T  33740966 gagtttaatttaaagtggtttatgtttggatacctttacaaa-agaagtgattcgtgtgtaaatagttgtttagatattttgtgtcaaaattgcgtttag 33740868  T
Q  385 atgtgtaaatgaccaaaatga 405  Q
     ||||||||||||||||||||    
T  33740867 gtgtgtaaatgaccaaaatga 33740847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 37036719 - 37036844
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattc 364  Q
    |||||| |||| | ||||||||||||| | |||| |||||||| |||||||  | ||| | | | ||||||||| ||||||| |||||||||| |||||     
T  37036719 aattgattttgatcaaaagtgagtttagtgtaaagtgatttatctttggatg-cttcata-gtataagtgatttatatgaaagatgttgtttgaatattg 37036816  T
Q  365 tgtatcaaaattgcttttggatgtgtaaat 394  Q
    |||  ||||||||||||||||| |||||||    
T  37036817 tgt--caaaattgcttttggatatgtaaat 37036844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 8049061 - 8049113
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||| |  | ||||||||||||||||||||    
T  8049061 gaattgattttggttaaaagtgagtttgaggttaattgatttatgtttggata 8049113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 9275494 - 9275546
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||  || | ||||||||||||||||||||    
T  9275494 gaattgattttggttaaaagtgagttagatgttaattgatttatgtttggata 9275546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 13253093 - 13253144
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||| ||||| |||||| |||||||||||||    
T  13253093 gaattgattttggttaaaagtgagttgaatatgaattga-ttatgtttggata 13253144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 39987977 - 39988029
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||| |  | ||||||||||||||||||||    
T  39987977 gaattgattttggttaaaagtgagtttgaggtgaattgatttatgtttggata 39988029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 19784915 - 19784864
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggat 315  Q
    ||||||| |||||||||||||||||| ||| |||| || |||||||||||||    
T  19784915 gaattgattttggttaaaagtgagttgaatgtaaagtggtttatgtttggat 19784864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 24045932 - 24045881
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggat 315  Q
    ||||||| ||||||||||||||||| | || | |||||||||||||||||||    
T  24045932 gaattgattttggttaaaagtgagtctgatgtgaattgatttatgtttggat 24045881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 10058174 - 10058124
Alignment:
Q  266 attgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||| ||||||||||||||||||  | || ||||||||||||||||||||    
T  10058174 attgattttggttaaaagtgagttggaaatgaattgatttatgtttggata 10058124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 2430307 - 2430358
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||| || || |||||| |||||||||||||    
T  2430307 gaattgattttggttaaaagtgagttgaacatgaattga-ttatgtttggata 2430358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 3667956 - 3667904
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| | ||||||||||| ||| | ||||||||||||||||||||    
T  3667956 gaattgattttgttaaaaagtgagttgaatgtgaattgatttatgtttggata 3667904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 5710396 - 5710448
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||||  | | ||||| ||||||||||||||    
T  5710396 gaattgattttggttaaaagtgagtttggtgtgaattgctttatgtttggata 5710448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 20069016 - 20068964
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||| ||||||||||| | | |||||| |||||||||||||||    
T  20069016 gaattgattttggtcaaaagtgagttgagtttaaatttatttatgtttggata 20068964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 318
Target Start/End: Complemental strand, 24036689 - 24036621
Alignment:
Q  251 aattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatc 318  Q
    ||||||||||| | ||||||| |||| | ||||||||||| ||| |||| ||||||||||||| |||||    
T  24036689 aattgattttgatagaattgattttgatgaaaagtgagttgaatgtaaaatgatttatgtttgaatatc 24036621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 313
Target Start/End: Complemental strand, 27021229 - 27021181
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttgg 313  Q
    |||||| ||||||||||| |||||| ||| | |||||||||||||||||    
T  27021229 aattgattttggttaaaaatgagttaaatgtgaattgatttatgtttgg 27021181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 316
Target Start/End: Original strand, 33467986 - 33468054
Alignment:
Q  249 aaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||||| | ||| ||| |||||||||||||||||| | | || |||||||| ||||||||||    
T  33467986 aaaattgattttgatagaactgattttggttaaaagtgagttgagtgtatattgatttgtgtttggata 33468054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 35760291 - 35760239
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| | ||||||||||| ||| | ||||||||||||||||||||    
T  35760291 gaattgattttgctaaaaagtgagttgaatgtgaattgatttatgtttggata 35760239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 41834994 - 41834942
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||  |  | ||||||||||||||||||||    
T  41834994 gaattgattttggttaaaagtgagttggaagtgaattgatttatgtttggata 41834942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 9e-40; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 226 - 404
Target Start/End: Complemental strand, 22699854 - 22699676
Alignment:
Q  226 gtgtgtttggttgtgcggtggaaaaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcaca 324  Q
    |||||||||||||||||||| ||||||||||||||| | ||||||| ||||||||||||| |||| ||| |||| ||||||||||||||||| | ||| |    
T  22699854 gtgtgtttggttgtgcggtgaaaaaaattgattttggtagaattgattttggttaaaagtaagttgaatgtaaagtgatttatgtttggataccttcaaa 22699755  T
Q  325 agcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    | ||||||||||||||||||||||| |||||||||| || ||  ||| ||||||||||  |||| |||| ||||||||||    
T  22699754 a-caaaagtgatttgtatgaaaaattttgtttggatgttttgagtcataattgcttttacatgtataaaagaccaaaatg 22699676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 226 - 404
Target Start/End: Complemental strand, 46958135 - 46957957
Alignment:
Q  226 gtgtgtttggttgtgcggtggaaaaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcaca 324  Q
    |||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||| ||  |||| | |||||||||||| || | ||| |    
T  46958135 gtgtgtttggttgtgcggtggaaaaaattgattttgatagaattgattttggttaaaagtgagttgaacgtaaagtaatttatgtttggttaccttcaaa 46958036  T
Q  325 agcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    | || ||||| ||||||||||||||||||||||||| || ||| ||| |||||||||| |||||||||| || |||||||    
T  46958035 a-cagaagtgctttgtatgaaaaatgttgtttggatgttttgtgtcagaattgcttttagatgtgtaaaagatcaaaatg 46957957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 226 - 404
Target Start/End: Original strand, 22980676 - 22980854
Alignment:
Q  226 gtgtgtttggttgtgcggtggaaaaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcaca 324  Q
    ||||||||||||||| |||| ||||||||||||||| | ||||||| ||||||||||||| |||| ||| |||| ||||||||||||||||| | ||| |    
T  22980676 gtgtgtttggttgtgtggtgaaaaaaattgattttggtagaattgattttggttaaaagtaagttgaatgtaaagtgatttatgtttggataccttcaaa 22980775  T
Q  325 agcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    | ||||||||||||||||||||||| |||||||||| || ||  ||| ||||||||||  |||| |||| ||||||||||    
T  22980776 a-caaaagtgatttgtatgaaaaattttgtttggatgttttgagtcataattgcttttacatgtataaaagaccaaaatg 22980854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 226 - 404
Target Start/End: Original strand, 22994262 - 22994441
Alignment:
Q  226 gtgtgtttggttgtgc-ggtggaaaaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcac 323  Q
    |||||||||||||||  |||| ||||||||||||||| | ||||||| ||||||||||||| |||| ||| |||| ||||||||||||||||| | |||     
T  22994262 gtgtgtttggttgtgatggtgaaaaaaattgattttggtagaattgattttggttaaaagtaagttgaatgtaaagtgatttatgtttggataccttcaa 22994361  T
Q  324 aagcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    || ||||||||||||||||||||||| |||||||||| || ||  ||| ||||||||||  |||| |||| ||||||||||    
T  22994362 aa-caaaagtgatttgtatgaaaaattttgtttggatgttttgagtcataattgcttttacatgtataaaagaccaaaatg 22994441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 251 - 387
Target Start/End: Original strand, 39000547 - 39000681
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    |||||||||||| ||||||||||| |||||||||||| |||||| ||| ||||||||||||||||| | |||||| ||||| |||||| ||| ||| ||     
T  39000547 aattgattttgtagaattgagtttagttaaaagtgagcttaataaaaaatgatttatgtttggataccttcacaa-caaaa-tgatttatataaaatatt 39000644  T
Q  351 ttgtttggatattctgtatcaaaattgcttttggatg 387  Q
    | ||||||||| | || |||| |||||||||||||||    
T  39000645 tagtttggatagtttgaatcataattgcttttggatg 39000681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 251 - 404
Target Start/End: Complemental strand, 5025615 - 5025463
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    |||||||||||| ||||||| ||| |||| ||||||||| |  | ||||||||||||||||||||| |||| | | ||||||| |||| ||| ||| |||    
T  5025615 aattgattttgtagaattgattttagttagaagtgagttgagcaaaaattgatttatgtttggata-cctccctaacaaaagtaatttatataaaatatg 5025517  T
Q  351 ttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    ||||||||||| | || |||||||||| ||||||  |||||||| || ||||||    
T  5025516 ttgtttggatagtttgaatcaaaattgattttgggcgtgtaaattactaaaatg 5025463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 261 - 404
Target Start/End: Original strand, 28947759 - 28947901
Alignment:
Q  261 gtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggat 360  Q
    |||||||||| |||||||||||||||||| ||  |||| |||||||||||||| || | ||| ||  | ||||| |||||||||||||| ||||||| ||    
T  28947759 gtggaattgattttggttaaaagtgagttgaacgtaaagtgatttatgtttggttaccttcaaaat-agaagtgttttgtatgaaaaatattgtttgaat 28947857  T
Q  361 attctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
     || ||| ||| |||||||||| |||||||| | ||||||||||    
T  28947858 gttttgtgtcagaattgcttttagatgtgtagaagaccaaaatg 28947901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 4954024 - 4954123
Alignment:
Q  225 tgtgtgtttggttgtgcggtggaaaaaattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcac 323  Q
    ||||||||| |||  |||||||| ||||||||||||| | ||||||| ||||||||||||||||||| || | ||||||||||||||||| || ||||||    
T  4954024 tgtgtgttttgtttggcggtggagaaaattgattttgagagaattgattttggttaaaagtgagtttgatgtgaattgatttatgtttgggtaccctcac 4954123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 251 - 404
Target Start/End: Complemental strand, 20232069 - 20231916
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagttt-aatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaat 349  Q
    |||||||||| |  |||||| ||||||||||||| ||||| |||  ||| || ||||||||| |||||  | ||||  | ||||||||||||||||| ||    
T  20232069 aattgattttataaaattgattttggttaaaagttagtttgaatgaaaagtgttttatgtttagatatatttacaat-agaagtgatttgtatgaaatat 20231971  T
Q  350 gttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    ||||||| |||||| ||| |||||||||||||||| | | || ||||||||||||    
T  20231970 gttgtttagatattttgtgtcaaaattgcttttggttatatagatgaccaaaatg 20231916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 330 - 404
Target Start/End: Complemental strand, 40286297 - 40286223
Alignment:
Q  330 aagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    |||||||||  |||||||||||||||||| |||| ||| ||||||||| |||||| |||||||||||||||||||    
T  40286297 aagtgatttacatgaaaaatgttgtttggctattttgtgtcaaaattgattttggttgtgtaaatgaccaaaatg 40286223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 220 - 316
Target Start/End: Original strand, 48550395 - 48550492
Alignment:
Q  220 cttactgtgtgtttggttgtgcggtggaaaaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||| |||||||||||||  ||||||| || ||||||||||| | ||||||| ||||||||||||||||||  || | ||||||||||||||||||||    
T  48550395 cttagtgtgtgtttggtttggcggtgggaagaattgattttgatagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggata 48550492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 404
Target Start/End: Complemental strand, 20677122 - 20676984
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatatt 363  Q
    ||||||| |||| | |||||||| |||| | |||| ||||||||||||||||| | ||| | | | ||||||||| ||  |||  |||||||||||||||    
T  20677122 gaattgattttgatcaaaagtgaatttagtgtaaagtgatttatgtttggata-cttcata-gtagaagtgatttatacaaaagttgttgtttggatatt 20677025  T
Q  364 ctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
     ||| |||||||||||||||||| ||||||| |||||||||    
T  20677024 ttgtgtcaaaattgcttttggatatgtaaattaccaaaatg 20676984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 225 - 317
Target Start/End: Complemental strand, 36150717 - 36150624
Alignment:
Q  225 tgtgtgtttggttgtgcggtggaaaaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatat 317  Q
    |||||||||||||||||||||   | ||||||||||| |  |||||| |||| ||||||||||||| ||| |||| ||||||||||||||||||    
T  36150717 tgtgtgtttggttgtgcggtgacgagaattgattttgatataattgattttgattaaaagtgagttgaatgtaaagtgatttatgtttggatat 36150624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 316
Target Start/End: Complemental strand, 2341517 - 2341449
Alignment:
Q  248 aaaaattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||||||| ||||||| ||  ||| |||||||||||||||||||  ||||||||||||||||    
T  2341517 aaaaattgattttgtagaattgatttcagtttaaagtgagtttaatataaaaagatttatgtttggata 2341449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 404
Target Start/End: Original strand, 14597645 - 14597776
Alignment:
Q  272 tttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatca 371  Q
    |||| ||||||||||||| |||  ||| ||||||||||||||||||| | |  |  | ||||||||  ||||| | |||||||||||||||| ||| |||    
T  14597645 tttgattaaaagtgagttgaatgaaaagtgatttatgtttggatatctttaagat-agaagtgattcttatgagagatgttgtttggatattttgtgtca 14597743  T
Q  372 aaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    ||||||||||| | | || ||||||||||||||    
T  14597744 aaattgcttttagttatgaaaatgaccaaaatg 14597776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 22702482 - 22702600
Alignment:
Q  285 gagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttgg 384  Q
    ||||| || ||||| |||||||||||||| || | ||| ||  | ||||| |||||||||||||| ||||| |||| || ||| ||| |||||||||| |    
T  22702482 gagttgaacataaagtgatttatgtttggttaccttcaaaat-agaagtgttttgtatgaaaaatattgttcggatgttttgtgtcagaattgcttttag 22702580  T
Q  385 atgtgtaaatgaccaaaatg 404  Q
    ||||||||| ||||||||||    
T  22702581 atgtgtaaaagaccaaaatg 22702600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 22991635 - 22991517
Alignment:
Q  285 gagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttgg 384  Q
    ||||| || ||||| |||||||||||||| || | ||| ||  | ||||| |||||||||||||| ||||| |||| || ||| ||| |||||||||| |    
T  22991635 gagttgaacataaagtgatttatgtttggttaccttcaaaat-agaagtgttttgtatgaaaaatattgttcggatgttttgtgtcagaattgcttttag 22991537  T
Q  385 atgtgtaaatgaccaaaatg 404  Q
    ||||||||| ||||||||||    
T  22991536 atgtgtaaaagaccaaaatg 22991517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 405
Target Start/End: Original strand, 38306201 - 38306268
Alignment:
Q  338 tgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatga 405  Q
    |||||||||||||||||||||||||| | | | |||||| ||||||| | ||||||||||||||||||    
T  38306201 tgtatgaaaaatgttgtttggatattttatgttaaaattacttttgggtatgtaaatgaccaaaatga 38306268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 227 - 316
Target Start/End: Complemental strand, 16493038 - 16492948
Alignment:
Q  227 tgtgtttggttgtgcggtggaaaaaattgattttgtgg-aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||| | ||||| |||||||||||||||    ||||||||||| ||||||||||||| ||| | |||| |||||||||||||||    
T  16493038 tgtgtttggttcttcggtgaaaaaaattgattttgaaataattgagtttgattaaaagtgagttgaatgtgaatttatttatgtttggata 16492948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 16566378 - 16566326
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||| ||| | ||||||||||||||||||||    
T  16566378 gaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggata 16566326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 51923013 - 51922961
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||| ||| | ||||||||||||||||||||    
T  51923013 gaattgattttggttaaaagtgagttgaatctgaattgatttatgtttggata 51922961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 316
Target Start/End: Original strand, 54487193 - 54487285
Alignment:
Q  225 tgtgtgtttggttgtgcggtggaaaaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||||| |||| ||  ||||||||| |||| | ||||||| || | | ||||||||||| ||| ||||||||||||||||||||||    
T  54487193 tgtgtgtttggttatgcgatgataaaaattgagtttgatagaattgatttcgatcaaaagtgagttgaatgtaaattgatttatgtttggata 54487285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 56241848 - 56241900
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| |||||||||||||| |||| ||||||||||||||||||||    
T  56241848 gaattgattttgattaaaagtgagtttgatatgaattgatttatgtttggata 56241900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 42944897 - 42944964
Alignment:
Q  251 aattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatat 317  Q
    ||||||||||| | ||||||| |||||||||||||||||| ||| | ||||||||||||||| |||||    
T  42944897 aattgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttagatat 42944964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 399
Target Start/End: Original strand, 21779858 - 21779954
Alignment:
Q  301 gatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgacca 399  Q
    |||||||||||||||||| | ||||  |||| ||||||||||||||| | || |||||||| | ||||||||||||| |||| | ||| ||||||||||    
T  21779858 gatttatgtttggatatctttacaataaaaa-tgatttgtatgaaaa-tattatttggatactttgtatcaaaattgattttaggtgtataaatgacca 21779954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 363
Target Start/End: Complemental strand, 28658156 - 28658070
Alignment:
Q  274 tggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatatt 363  Q
    ||||| |||||||||| || ||||| ||||||||||||  ||| | ||| || || |||||||||||||||||||| |||||||||||||    
T  28658156 tggttgaaagtgagttaaacataaaatgatttatgttt--ataccttcaaaa-cataagtgatttgtatgaaaaatattgtttggatatt 28658070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 404
Target Start/End: Original strand, 1589670 - 1589746
Alignment:
Q  328 aaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    |||| ||||||||||||||| | ||||||||||||| | | |  ||||||||||| | | |||||||||||||||||    
T  1589670 aaaattgatttgtatgaaaagtattgtttggatattttatgttgaaattgctttttggtttgtaaatgaccaaaatg 1589746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 13167598 - 13167546
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||| ||| | ||||||||||| ||||||||    
T  13167598 gaattgattttggttaaaagtgagttgaatgtgaattgatttatatttggata 13167546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 14054924 - 14054872
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||| || |||||||||||| || | ||||||||||||||||||||    
T  14054924 gaattgagtttagtcaaaagtgagtttgatgtgaattgatttatgtttggata 14054872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 14564159 - 14564211
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||| |||||||  |||| ||||||||||||||||||||    
T  14564159 gaattgattttggttaaatgtgagttggatatgaattgatttatgtttggata 14564211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 26651861 - 26651913
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||| ||| | ||||||||||||||| ||||    
T  26651861 gaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttagata 26651913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 261
Target Start/End: Complemental strand, 40286409 - 40286373
Alignment:
Q  225 tgtgtgtttggttgtgcggtggaaaaaattgattttg 261  Q
    ||||||||||||||||||||||| |||||||||||||    
T  40286409 tgtgtgtttggttgtgcggtggacaaaattgattttg 40286373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 41866228 - 41866176
Alignment:
Q  263 ggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggat 315  Q
    |||||||||||| ||||||||||||||  || | |||||||||||||||||||    
T  41866228 ggaattgagtttagttaaaagtgagttggatgtgaattgatttatgtttggat 41866176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 46830082 - 46830134
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||  || | ||||||||||||||||||||    
T  46830082 gaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggata 46830134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 49136595 - 49136543
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| | ||||||||||||||||| || | ||||||||||||||||||||    
T  49136595 gaattgattatggttaaaagtgagtttgatgtgaattgatttatgtttggata 49136543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 55638768 - 55638820
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||||    
T  55638768 gaattgatttttgttaaaagtgagttaaatgtaaattgatttatgtttagata 55638820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 316
Target Start/End: Original strand, 6138634 - 6138685
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||| ||||||||||||||||||  || | ||||||||||||||||||||    
T  6138634 aattgattttggttaaaagtgagttggatgtgaattgatttatgtttggata 6138685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 261
Target Start/End: Original strand, 22694556 - 22694591
Alignment:
Q  226 gtgtgtttggttgtgcggtggaaaaaattgattttg 261  Q
    |||||||||||||||||||||||| |||||||||||    
T  22694556 gtgtgtttggttgtgcggtggaaagaattgattttg 22694591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 316
Target Start/End: Original strand, 26426129 - 26426179
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||| ||||||||||||||||||  ||||||||||| |||||||||||||    
T  26426129 aattgattttggttaaaagtgagttagatataaattga-ttatgtttggata 26426179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 261
Target Start/End: Original strand, 28947708 - 28947743
Alignment:
Q  226 gtgtgtttggttgtgcggtggaaaaaattgattttg 261  Q
    |||||||||||||||||||||||| |||||||||||    
T  28947708 gtgtgtttggttgtgcggtggaaagaattgattttg 28947743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 337
Target Start/End: Complemental strand, 38306098 - 38306013
Alignment:
Q  251 aattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatt 337  Q
    ||||||||||||  ||||||| ||| |||||||||||||| |||   |||||||||||||||||||| ||| | ||||||||||||||    
T  38306098 aattgattttgttagaattgatttttgttaaaagtgagttgaatgcgaattgatttatgtttggata-cctta-aagcaaaagtgatt 38306013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 48550290 - 48550239
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggat 315  Q
    ||||||| |||| |||||||||||||  || |||||||||||||||||||||    
T  48550290 gaattgattttgattaaaagtgagttagatgtaaattgatttatgtttggat 48550239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 337
Target Start/End: Complemental strand, 54488692 - 54488607
Alignment:
Q  251 aattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatt 337  Q
    ||||||||||||  ||||||| ||| |||||||||||||| ||| | |||||||||||||||| ||| ||| | ||||||||||||||    
T  54488692 aattgattttgttagaattgatttttgttaaaagtgagttgaatgtgaattgatttatgtttgaata-cctta-aagcaaaagtgatt 54488607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 523222 - 523172
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggat 315  Q
    |||||| |||||  ||||||||||| ||||| |||||||||||||||||||    
T  523222 aattgattttgggaaaaagtgagttcaatatgaattgatttatgtttggat 523172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 315
Target Start/End: Original strand, 2175161 - 2175211
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggat 315  Q
    |||||| |||| |||||||||||||| || | |||||||||||||||||||    
T  2175161 aattgattttgattaaaagtgagtttgatgtgaattgatttatgtttggat 2175211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 22694610 - 22694656
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtt 310  Q
    ||||||| |||||||||||||||||| || ||||| |||||||||||    
T  22694610 gaattgattttggttaaaagtgagttgaacataaagtgatttatgtt 22694656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 317
Target Start/End: Complemental strand, 33843872 - 33843802
Alignment:
Q  248 aaaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatat 317  Q
    |||||||||||||| | ||||||| | ||| ||||||||||||  || |||| ||||||||||||||||||    
T  33843872 aaaaattgattttgattgaattgattctggctaaaagtgagttggatgtaaagtgatttatgtttggatat 33843802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 14076086 - 14076038
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttgga 314  Q
    |||||| |||||||||| |||||||| || ||||||||||||||||||||    
T  14076086 aattgattttggttaaa-gtgagtttgatgtaaattgatttatgtttgga 14076038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 24512276 - 24512223
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatat 317  Q
    ||||||| |||| |||||||| ||||||| |||| || ||||||||||||||||    
T  24512276 gaattgattttgattaaaagtaagtttaaaataacttaatttatgtttggatat 24512223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 28752601 - 28752537
Alignment:
Q  251 aattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggat 315  Q
    ||||||||||||  ||||||| |||||||||||||||| || | |||| |||||||||||||||||    
T  28752601 aattgattttgtctgaattgattttggttaaaagtgag-ttgacataatttgatttatgtttggat 28752537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 33574243 - 33574198
Alignment:
Q  272 tttggttaaaagtgagtttaatataaattgatttatgtttggatat 317  Q
    |||||||||||||||||| ||| | |||||||||||||||| ||||    
T  33574243 tttggttaaaagtgagttgaatgtgaattgatttatgtttgaatat 33574198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 38740302 - 38740367
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||||  |||||| ||||| |||||||||||| ||  | || |||||||||||||||||    
T  38740302 aattgattttgtaaaattgattttggataaaagtgagttgaagttgaagtgatttatgtttggata 38740367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 6505274 - 6505222
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||| ||||||| || | ||||||||||||||| ||||    
T  6505274 gaattgattttggttaaaaatgagtttgatgtgaattgatttatgtttagata 6505222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 19592244 - 19592296
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||  |  | ||||||||||||||||||||    
T  19592244 gaattgattttggttaaaagtgagttggaagtgaattgatttatgtttggata 19592296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 29149320 - 29149372
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| | ||||||||||| ||| | ||||||||||||||||||||    
T  29149320 gaattgattttgctaaaaagtgagttgaatgtgaattgatttatgtttggata 29149372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 315
Target Start/End: Original strand, 29778982 - 29779046
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggat 315  Q
    |||||||| |||  |||||| | ||| |||||||||||| |||||||| |||||||| |||||||    
T  29778982 aattgattgtgtaaaattgattatggataaaagtgagttgaatataaagtgatttatctttggat 29779046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 39187807 - 39187755
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||| | || ||| | ||||||||||||||||||||    
T  39187807 gaattgattttggttaaaagtaatttgaatgtgaattgatttatgtttggata 39187755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 39636858 - 39636806
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| |||||||||||||  || | ||||||||||||||||||||    
T  39636858 gaattgattttgattaaaagtgagttggatgtgaattgatttatgtttggata 39636806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 43772136 - 43772188
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||  || | ||| ||||||||||||||||    
T  43772136 gaattgattttggttaaaagtgagttggatgtgaatcgatttatgtttggata 43772188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 46926113 - 46926069
Alignment:
Q  272 tttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||||||||||  || | ||||||||||||||||||||    
T  46926113 tttggttaaaagtgagttagatgtgaattgatttatgtttggata 46926069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 49519803 - 49519751
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||  || | |||| |||||||||||||||    
T  49519803 gaattgattttggttaaaagtgagttggatgtgaatttatttatgtttggata 49519751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 261
Target Start/End: Complemental strand, 54683516 - 54683480
Alignment:
Q  225 tgtgtgtttggttgtgcggtggaaaaaattgattttg 261  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  54683516 tgtgtgtttggttctgcggtgaaaaaaattgattttg 54683480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 9e-40; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 251 - 374
Target Start/End: Complemental strand, 40352516 - 40352394
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||| ||||||||     
T  40352516 aattgattttgtggaattgattttggttaaaagtgagtttaatgtaaagtgatttatgtttggatatcctcacaa-caaaagtgatttgtgtgaaaaata 40352418  T
Q  351 ttgtttggatattctgtatcaaaa 374  Q
    ||||||| ||| || |||||||||    
T  40352417 ttgtttgaatactccgtatcaaaa 40352394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 251 - 404
Target Start/End: Complemental strand, 4347099 - 4346947
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    |||||||||||| ||||||| |||||||||||||||||| ||| |||| ||||||||||||||||| | ||| || |||||||||||||||||||||||     
T  4347099 aattgattttgtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggataccttca-aaacaaaagtgatttgtatgaaaaatt 4347001  T
Q  351 ttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    |||||||||| || ||  | | |||||||||| |||||||||| ||||||||||    
T  4347000 ttgtttggatgttttgagtgagaattgcttttagatgtgtaaaagaccaaaatg 4346947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 226 - 404
Target Start/End: Complemental strand, 5930911 - 5930733
Alignment:
Q  226 gtgtgtttggttgtgcggtggaaaaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcaca 324  Q
    ||||||||||||||||||||||||||||| |||| | | ||||||| ||||||||||||| | || ||| |||| |||||||||||||| || | ||| |    
T  5930911 gtgtgtttggttgtgcggtggaaaaaattaatttagatagaattgattttggttaaaagtaaattgaatgtaaagtgatttatgtttggttaccttcaaa 5930812  T
Q  325 agcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    | ||||||||||||||||||||||||||||||| || || ||  | | |||||||||| |||||||||| ||||||||||    
T  5930811 a-caaaagtgatttgtatgaaaaatgttgtttgaatgttttgagtgagaattgcttttagatgtgtaaaagaccaaaatg 5930733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 47981794 - 47981927
Alignment:
Q  249 aaaattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaa 348  Q
    ||||||||||||||  |||| | ||||||||||| |||||| ||| |||| ||||||||||||||||| | ||| || || ||||||||| ||| |||||    
T  47981794 aaaattgattttgtaaaattaattttggttaaaattgagttgaatttaaagtgatttatgtttggataccttca-aaacagaagtgatttttat-aaaaa 47981891  T
Q  349 tgttgtttggatattctgtatcaaaattgcttttgg 384  Q
    |  |||||||||||| ||||| | ||||||||||||    
T  47981892 ttgtgtttggatattttgtattagaattgcttttgg 47981927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 316
Target Start/End: Complemental strand, 25061354 - 25061286
Alignment:
Q  249 aaaattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||||| | ||||||| |||||||||||||||||| || |||||||||||||||||||||||    
T  25061354 aaaattgattttggttgaattgattttggttaaaagtgagttgaacataaattgatttatgtttggata 25061286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 4369777 - 4369875
Alignment:
Q  225 tgtgtgtttggttgtgcggtggaaaaaattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcac 323  Q
    |||||||||||||  |||||||| ||||||||||||| | ||||||| |||||||||||||||| || || | ||||||||||||||||| || ||||||    
T  4369777 tgtgtgtttggtttggcggtggagaaaattgattttgagagaattgattttggttaaaagtgag-ttgatgtgaattgatttatgtttgggtaccctcac 4369875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 7765362 - 7765436
Alignment:
Q  330 aagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    ||||||||  |||||||||||||||||||||||| ||| |||||||||||||| | | || ||||||||||||||    
T  7765362 aagtgattcatatgaaaaatgttgtttggatattttgtgtcaaaattgcttttagttatgaaaatgaccaaaatg 7765436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 36447754 - 36447828
Alignment:
Q  330 aagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    ||||||||| ||| ||| |||||||||||||||| ||| |||||||||||||||||| ||||||| | |||||||    
T  36447754 aagtgatttatataaaagatgttgtttggatattttgtgtcaaaattgcttttggatatgtaaattatcaaaatg 36447828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 403
Target Start/End: Complemental strand, 29438710 - 29438560
Alignment:
Q  249 aaaattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaa 348  Q
    |||||||||||||  ||||||| |||| | ||||||||||| |||||||| || |||||||||  ||| | |     |||||| ||||||||||| ||||    
T  29438710 aaaattgattttgcagaattgattttgatgaaaagtgagttcaatataaagtggtttatgtttatataccttt----gcaaaaatgatttgtatgtaaaa 29438615  T
Q  349 tgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaat 403  Q
    | ||||||||||||| ||| ||||| ||||||||   | || |||||||||||||    
T  29438614 tattgtttggatattgtgtgtcaaacttgcttttaagtatgcaaatgaccaaaat 29438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 276 - 404
Target Start/End: Original strand, 7335905 - 7336032
Alignment:
Q  276 gttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaat 375  Q
    |||||||||||||| ||| |||| ||||||||||||| || |  | |||| ||||||||||||  || ||| ||| ||||||||||   || ||||||||    
T  7335905 gttaaaagtgagttgaatgtaaagtgatttatgtttgaatgttttaacaa-caaaagtgatttacatcaaagatggtgtttggatagcttgaatcaaaat 7336003  T
Q  376 tgcttttggatgtgtaaatgaccaaaatg 404  Q
    ||||||| | ||||||||| |||||||||    
T  7336004 tgcttttaggtgtgtaaattaccaaaatg 7336032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 13344898 - 13344836
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttgg 313  Q
    |||||||||||| ||||||| |||||||||||||||||| ||  |||| ||||||||||||||    
T  13344898 aattgattttgtagaattgattttggttaaaagtgagttgaacgtaaagtgatttatgtttgg 13344836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 20800277 - 20800343
Alignment:
Q  251 aattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||| | ||||||| |||||||||||||||||| ||| | ||||||||||||||||||||    
T  20800277 aattgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggata 20800343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 35569202 - 35569268
Alignment:
Q  251 aattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||| | ||||||| |||||||||||||||||| ||| | ||||||||||||||||||||    
T  35569202 aattgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggata 35569268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 40229470 - 40229536
Alignment:
Q  251 aattgattttgt-ggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||||||||| |||||||| ||||||||||||||||||| |  | ||||||||||||||||||||    
T  40229470 aattgattttgttggaattgattttggttaaaagtgagtttgaggtgaattgatttatgtttggata 40229536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 34718555 - 34718515
Alignment:
Q  272 tttggttaaaagtgagtttaatataaattgatttatgtttg 312  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  34718555 tttggttaaaagtgagtttgatataaattgatttatgtttg 34718515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 261
Target Start/End: Complemental strand, 4347139 - 4347104
Alignment:
Q  226 gtgtgtttggttgtgcggtggaaaaaattgattttg 261  Q
    ||||||||||||||||||||||||||||||||||||    
T  4347139 gtgtgtttggttgtgcggtggaaaaaattgattttg 4347104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 12468323 - 12468272
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||| ||||||||||||||||||| || ||||||||||||| ||||||||    
T  12468323 aattgattttggttaaaagtgagtttgatgtaaattgatttatatttggata 12468272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 48511019 - 48510968
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||| |||||||||||||||||| ||| | ||||||||||||||||||||    
T  48511019 aattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggata 48510968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 383
Target Start/End: Original strand, 33226136 - 33226268
Alignment:
Q  249 aaaattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaa 348  Q
    |||||||||||| | ||||||||||| | ||||| ||| || |  | |||||||||||||||||||||   |||||| ||||||| |||| ||| ||| |    
T  33226136 aaaattgattttttagaattgagtttagctaaaa-tgatttgagcaaaaattgatttatgtttggataatttcacaa-caaaagtaatttatataaaata 33226233  T
Q  349 tgttgtttggatattctgtatcaaaattgcttttg 383  Q
    |||||| | |||| | || ||||||||||||||||    
T  33226234 tgttgtctagatagtttgaatcaaaattgcttttg 33226268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 7826354 - 7826427
Alignment:
Q  251 aattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcac 323  Q
    ||||||||||| | ||||||| |||||||||||||||| || || | ||||||||||||||||| || ||||||    
T  7826354 aattgattttgagagaattgattttggttaaaagtgagcttgatgtgaattgatttatgtttgggtaccctcac 7826427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 1199931 - 1199887
Alignment:
Q  272 tttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||    
T  1199931 tttggttaaaagtgagttgaatgtgaattgatttatgtttggata 1199887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 15884339 - 15884287
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||  || | ||||||||||||||||||||    
T  15884339 gaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggata 15884287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 31223486 - 31223434
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||  || | ||||||||||||||||||||    
T  31223486 gaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggata 31223434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 42850233 - 42850285
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||  || | ||||||||||||||||||||    
T  42850233 gaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggata 42850285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 403
Target Start/End: Original strand, 43541650 - 43541772
Alignment:
Q  279 aaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgc 378  Q
    ||||||||||| || || || ||||||||||||||||| ||| | |||   ||||||||| ||| ||| |||||||||||||| | || |  ||||| ||    
T  43541650 aaaagtgagttgaaaatgaagtgatttatgtttggata-ccttaaaagtgtaagtgatttatatcaaatatgttgtttggataatttg-actaaaatcgc 43541747  T
Q  379 ttttggatgtgtaaatgaccaaaat 403  Q
    |||||| ||||||||| ||||||||    
T  43541748 ttttgggtgtgtaaattaccaaaat 43541772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 27801666 - 27801717
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggat 315  Q
    ||||||| |||| |||||||||||||  || |||||||||||||||||||||    
T  27801666 gaattgattttgattaaaagtgagttagatgtaaattgatttatgtttggat 27801717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 29759762 - 29759711
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||| | |||||||||||||||| ||| |||| |||||||||||||||||    
T  29759762 aattgattatggttaaaagtgagttgaatgtaaaatgatttatgtttggata 29759711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 291731 - 291783
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| |||||||||||||| | || ||||| ||||||||||||||    
T  291731 gaattgattttgattaaaagtgagtttgagatgaattggtttatgtttggata 291783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 5410751 - 5410703
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttg 312  Q
    ||||||| |||| |||||||||||||  || ||||||||||||||||||    
T  5410751 gaattgattttgattaaaagtgagttggatgtaaattgatttatgtttg 5410703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 10470701 - 10470650
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| ||||||||||||| ||| |||||||| |||||||||||||    
T  10470701 gaattgattttgattaaaagtgagttgaatgtaaattga-ttatgtttggata 10470650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 13056109 - 13056061
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttg 312  Q
    ||||||| |||||||||||||||||| | | | ||||||||||||||||    
T  13056109 gaattgattttggttaaaagtgagttgagtgtgaattgatttatgtttg 13056061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 316
Target Start/End: Original strand, 34571084 - 34571176
Alignment:
Q  225 tgtgtgtttggttgtgcggtggaaaaaattgatttt-gtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||||| |||||||  |||||||||||||  |  |||||| | || ||||||||||||| ||| ||| || |||||| ||||||||    
T  34571084 tgtgtgtttggttatgcggtgacaaaaattgattttcataaaattgattctgattaaaagtgagttgaatgtaagttcatttatatttggata 34571176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 47978330 - 47978426
Alignment:
Q  220 cttactgtgtgtttggttgtgcggtggaaaaaattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggat 315  Q
    |||| ||| ||| ||||| |||||||  || |||| |||||| | ||||||| ||||| |||||||||||| ||| |||| ||||||||| ||||||    
T  47978330 cttagtgtatgtatggttttgcggtgacaagaattcattttgagtgaattgattttgggtaaaagtgagttgaatgtaaagtgatttatggttggat 47978426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 318
Target Start/End: Complemental strand, 49178301 - 49178233
Alignment:
Q  251 aattgattttg-tggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatc 318  Q
    ||||||||||| | ||||||| ||| ||||||| ||| |  |||||||||||||||||||||| |||||    
T  49178301 aattgattttgattgaattgatttttgttaaaaatgactcgaatataaattgatttatgtttgaatatc 49178233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 50977354 - 50977406
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||||  | | ||||| ||||||||||||||    
T  50977354 gaattgattttggttaaaagtgagtttggtgtgaattgttttatgtttggata 50977406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 5e-35; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 226 - 404
Target Start/End: Complemental strand, 38494364 - 38494186
Alignment:
Q  226 gtgtgtttggttgtgcggtggaaaaaattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcaca 324  Q
    |||||||||||||||||||||  ||||||||||||||  ||||||| |||||||||||||||||| ||| | || || ||||||||||| || | |||||    
T  38494364 gtgtgtttggttgtgcggtggcgaaaattgattttgtttgaattgattttggttaaaagtgagttgaatgtgaagtggtttatgtttggttaccttcaca 38494265  T
Q  325 agcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    |  | ||||||||||||||||| || |||||||||||||  || ||||||||| |||||  |||||||||||||||||||    
T  38494264 at-agaagtgatttgtatgaaatattttgtttggatatttggtgtcaaaattgtttttgagtgtgtaaatgaccaaaatg 38494186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 265 - 404
Target Start/End: Complemental strand, 20088977 - 20088839
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattc 364  Q
    |||||| |||||||||||||||||| ||  |||| |||||||||||||| || | | | ||||| ||| | ||||||||||||||||||||||||| ||     
T  20088977 aattgattttggttaaaagtgagttgaacgtaaagtgatttatgtttggttaccttta-aagcagaagagctttgtatgaaaaatgttgtttggatgttt 20088879  T
Q  365 tgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    ||| ||| |||||||||| |||||||||| ||||||||||    
T  20088878 tgtgtcagaattgcttttagatgtgtaaaagaccaaaatg 20088839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 251 - 404
Target Start/End: Original strand, 33936807 - 33936959
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    ||||||||| || |||||   ||||||| ||||| | || ||| |||| |||||||||||||  || | ||| || ||||||||||||||||||||||||    
T  33936807 aattgatttcgtagaattacttttggttcaaagttaattgaatgtaaagtgatttatgtttgcttaccttcaaaa-caaaagtgatttgtatgaaaaatg 33936905  T
Q  351 ttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    |||||||||| || || |||| | |||||||| |||||||||| ||||||||||    
T  33936906 ttgtttggatgttttgaatcagacttgcttttagatgtgtaaaagaccaaaatg 33936959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 251 - 403
Target Start/End: Complemental strand, 16353550 - 16353399
Alignment:
Q  251 aattgattttgtggaattgagtttggtt-aaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaat 349  Q
    |||||||||||  ||||||| ||| | | ||||||||||||||| |||| || |||||||||| ||||| |  |||  |||| | ||||||||| |||||    
T  16353550 aattgattttgcagaattgatttttgatgaaaagtgagtttaatctaaagtggtttatgtttgaatatctttgcaa--aaaaataatttgtatgtaaaat 16353453  T
Q  350 gttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaat 403  Q
    |||||||||||| | ||| |||||||||||||| | |||| |||||||||||||    
T  16353452 gttgtttggatactgtgtgtcaaaattgcttttaggtgtgcaaatgaccaaaat 16353399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 39634151 - 39634217
Alignment:
Q  251 aattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||||  ||||||| |||||||||||||||||| ||||| ||||||||||||||||||||    
T  39634151 aattgattttgttagaattgattttggttaaaagtgagttgaatatgaattgatttatgtttggata 39634217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 44274762 - 44274698
Alignment:
Q  249 aaaattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttgg 313  Q
    |||||||||||||   |||||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  44274762 aaaattgattttgcataattgattttggttaaaagtgagtttaagataaaatgatttatgtttgg 44274698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 37148675 - 37148749
Alignment:
Q  330 aagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    ||||||||||||||||  || ||||||||||||| | | ||||||||| |||| | |||||||||||||||||||    
T  37148675 aagtgatttgtatgaatgatattgtttggatattttatgtcaaaattgattttcgttgtgtaaatgaccaaaatg 37148749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 312
Target Start/End: Original strand, 36920178 - 36920226
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttg 312  Q
    ||||||| ||||||||||||||||||  |||||||||||||||||||||    
T  36920178 gaattgattttggttaaaagtgagttagatataaattgatttatgtttg 36920226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 38230177 - 38230125
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||| ||| | ||||||||||||||||||||    
T  38230177 gaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggata 38230125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 48459819 - 48459767
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||| ||| | ||||||||||||||||||||    
T  48459819 gaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggata 48459767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 261
Target Start/End: Original strand, 33936767 - 33936802
Alignment:
Q  226 gtgtgtttggttgtgcggtggaaaaaattgattttg 261  Q
    ||||||||||||||||||||||||||||||||||||    
T  33936767 gtgtgtttggttgtgcggtggaaaaaattgattttg 33936802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 42752177 - 42752243
Alignment:
Q  251 aattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||||  ||||||| ||| |||||||||||||| ||| | ||||||||||||||||||||    
T  42752177 aattgattttgttagaattgatttttgttaaaagtgagttgaatgtgaattgatttatgtttggata 42752243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 265 - 382
Target Start/End: Complemental strand, 4228655 - 4228539
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattc 364  Q
    |||||| |||| ||||||||||||| |||  ||| ||||||||||||||||| | | |  |  | ||||||||  ||||||| |||||||||| |||||     
T  4228655 aattgattttgattaaaagtgagttgaatgaaaagtgatttatgtttggatacctttaagat-agaagtgattcatatgaaagatgttgtttgaatattt 4228557  T
Q  365 tgtatcaaaattgctttt 382  Q
    ||| ||||||||||||||    
T  4228556 tgtgtcaaaattgctttt 4228539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 10371958 - 10372007
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttgg 313  Q
    ||||||| |||||||||||||||||| ||| | |||||||||||||||||    
T  10371958 gaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttgg 10372007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 3342899 - 3342847
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||| ||||||||||||||  |||| ||||||||||||||||||||    
T  3342899 gaattgattttagttaaaagtgagttggatatgaattgatttatgtttggata 3342847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 3622460 - 3622512
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||  || | ||||||||||||||||||||    
T  3622460 gaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggata 3622512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 3750795 - 3750743
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||  || | ||||||||||||||||||||    
T  3750795 gaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggata 3750743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 313
Target Start/End: Complemental strand, 33746497 - 33746449
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttgg 313  Q
    |||||| |||| ||||||||||||| ||||||||||||||| |||||||    
T  33746497 aattgattttgattaaaagtgagttgaatataaattgatttttgtttgg 33746449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 39391137 - 39391189
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||| |  | ||||||||||||||||||||    
T  39391137 gaattgattttggttaaaagtgagtttgaggtgaattgatttatgtttggata 39391189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 261
Target Start/End: Original strand, 43186541 - 43186577
Alignment:
Q  225 tgtgtgtttggttgtgcggtggaaaaaattgattttg 261  Q
    ||||||||||||||||||||||| |||||||||||||    
T  43186541 tgtgtgtttggttgtgcggtggataaaattgattttg 43186577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 312
Target Start/End: Original strand, 44967399 - 44967447
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttg 312  Q
    ||||||| |||||||||||||||||| ||| | ||||||||||||||||    
T  44967399 gaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttg 44967447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 32187049 - 32186998
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggat 315  Q
    ||||||| |||| |||||||||||||  || |||||||||||||||||||||    
T  32187049 gaattgattttgattaaaagtgagttagatgtaaattgatttatgtttggat 32186998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 41715766 - 41715715
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggat 315  Q
    ||||||| |||| |||||||||||||  || |||||||||||||||||||||    
T  41715766 gaattgattttgattaaaagtgagttagatgtaaattgatttatgtttggat 41715715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 47217541 - 47217592
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggat 315  Q
    ||||||| |||| |||||||||||||| || | |||||||||||||||||||    
T  47217541 gaattgattttgattaaaagtgagtttgatgtgaattgatttatgtttggat 47217592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 314
Target Start/End: Complemental strand, 37639539 - 37639489
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttgga 314  Q
    ||||||| ||||||||||||||| || ||| | ||||||||||||||||||    
T  37639539 gaattgattttggttaaaagtgaattgaatgtgaattgatttatgtttgga 37639489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 15311203 - 15311268
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||||| |||  |||||| | |||||||||||||||| ||| || | |||||||||||||||||    
T  15311203 aattgattgtgtaaaattgaatatggttaaaagtgagttgaatgtatagtgatttatgtttggata 15311268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 42740501 - 42740448
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatat 317  Q
    ||||||| ||||||||||||| |||| ||| | ||||||||||||||| |||||    
T  42740501 gaattgattttggttaaaagtaagttgaatgttaattgatttatgtttagatat 42740448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 43631696 - 43631748
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatat 317  Q
    ||||||| ||||||||||||||||||  |||| |||||| ||||||||||||||    
T  43631696 gaattgattttggttaaaagtgagttagatatgaattga-ttatgtttggatat 43631748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 9456213 - 9456162
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||||||||| |  |||||||| |||||||||||||    
T  9456213 gaattgattttggttaaaagtgagtttgaggtaaattga-ttatgtttggata 9456162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 315
Target Start/End: Complemental strand, 16079524 - 16079460
Alignment:
Q  252 attgatttt-gtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggat 315  Q
    ||||||||| || ||||||| ||||||| |||||||||| |||  ||| ||||||||||||||||    
T  16079524 attgattttagtagaattgattttggtttaaagtgagttgaatgaaaagtgatttatgtttggat 16079460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 24770912 - 24770964
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatat 317  Q
    |||||| ||||||||||||||||||  || ||||||||||||| ||| |||||    
T  24770912 aattgattttggttaaaagtgagttggatgtaaattgatttatatttagatat 24770964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 290
Target Start/End: Original strand, 37008337 - 37008377
Alignment:
Q  251 aattgattttgt-ggaattgagtttggttaaaagtgagttt 290  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  37008337 aattgattttgttggaattgattttggttaaaagtgagttt 37008377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 37562679 - 37562627
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||| ||||||||||||||  || | ||||||||||||||||||||    
T  37562679 gaattgatttttgttaaaagtgagttggatgtgaattgatttatgtttggata 37562627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 39977661 - 39977609
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||| || |||||||||||| |||| ||||||||||| ||||||||    
T  39977661 gaattgattttagtcaaaagtgagtttgatatgaattgatttatttttggata 39977609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 47022028 - 47021976
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| ||||||||||||| |||| ||  | ||||||||||||||||||||    
T  47022028 gaattgattttggttaaaagtaagttgaaagtgaattgatttatgtttggata 47021976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 251 - 404
Target Start/End: Original strand, 15257 - 15408
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatg 350  Q
    ||||||||||||  |||||| |||||||||||||||||| |||||||| ||||||||||||||||| | ||| || || ||||||||| |||||||| ||    
T  15257 aattgattttgtcaaattgattttggttaaaagtgagttgaatataaagtgatttatgtttggata-cttca-aaacataagtgatttttatgaaaactg 15354  T
Q  351 ttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
     |||||| ||||| || || | |||||||||||||||||| || ||| ||||||    
T  15355 gtgtttgaatattttgcattagaattgcttttggatgtgtgaaagactaaaatg 15408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 404
Target Start/End: Original strand, 199382 - 199521
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatatt 363  Q
    ||||||| |||||||||||||||||| ||  |||| |||||||||||||| || | ||| ||  | ||||| ||||||||||||||||||||||||| ||    
T  199382 gaattgattttggttaaaagtgagttgaacgtaaagtgatttatgtttggttaccttcaaaat-ataagtgctttgtatgaaaaatgttgtttggatgtt 199480  T
Q  364 ctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
     ||| ||| |||||||||| || ||||||| ||||||||||    
T  199481 ttgtgtcagaattgcttttagaagtgtaaaagaccaaaatg 199521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 251 - 404
Target Start/End: Original strand, 3605751 - 3605903
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatatcctc-acaagcaaaagtgatttgtatgaaaaat 349  Q
    |||||||||||| ||||||| |||| ||||||||||||| | |  ||| ||||||||||||||| | |||| || |  | |||||||||  |||||||||    
T  3605751 aattgattttgtagaattgattttgattaaaagtgagttgagtgaaaagtgatttatgtttggaca-cctctaccat-agaagtgatttacatgaaaaat 3605848  T
Q  350 gttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    ||||||||  |||| ||| ||||||||| |||||| |||||||||||||||||||    
T  3605849 gttgtttgactattttgtgtcaaaattgattttggttgtgtaaatgaccaaaatg 3605903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 16548227 - 16548175
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||| ||| | ||||||||||||||||||||    
T  16548227 gaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggata 16548175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 33899018 - 33899070
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| |||||||||||||| |||| ||||||||||||||||||||    
T  33899018 gaattgattttgattaaaagtgagtttgatatgaattgatttatgtttggata 33899070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 316
Target Start/End: Original strand, 16442324 - 16442415
Alignment:
Q  226 gtgtgtttggttgtgcggtggaaaaaattgattttgtg-gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||||  |||||||  | ||||||||||| | ||||||| ||| |||| ||||||||| ||| | ||||||||||||||||||||    
T  16442324 gtgtgtttggtttggcggtggggagaattgattttgagagaattgattttagttacaagtgagttgaatgtgaattgatttatgtttggata 16442415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 10826179 - 10826126
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatat 317  Q
    ||||||| |||||||||||||||||| ||| | ||||||||| |||||||||||    
T  10826179 gaattgattttggttaaaagtgagttgaatttgaattgatttttgtttggatat 10826126  T

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Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 29409264 - 29409316
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| |||||||||||||| || | ||||||||||||||||||||    
T  29409264 gaattgattttgattaaaagtgagtttgatgtgaattgatttatgtttggata 29409316  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 17830011 - 17830058
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgttt 311  Q
    ||||||| |||||||||||||||||| ||| | |||||||||||||||    
T  17830011 gaattgattttggttaaaagtgagttgaatgtgaattgatttatgttt 17830058  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 312
Target Start/End: Complemental strand, 1500057 - 1499996
Alignment:
Q  251 aattgattttgtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttg 312  Q
    ||||||||||||  |||||| ||||| |||||| ||||| | | ||||||||||||||||||    
T  1500057 aattgattttgtaaaattgattttggctaaaagcgagttgagtgtaaattgatttatgtttg 1499996  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 5584062 - 5584114
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggatat 317  Q
    ||||||| ||||  |||||||||||||||| ||| |||||||||||||||||||    
T  5584062 gaattgattttgactaaaagtgagtttaatgtaa-ttgatttatgtttggatat 5584114  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 403
Target Start/End: Original strand, 8551170 - 8551243
Alignment:
Q  330 aagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatgaccaaaat 403  Q
    ||||||||| ||| ||||||||||||||  |||| || |||| ||||| |||| |||||  |||||||||||||    
T  8551170 aagtgatttatataaaaaatgttgtttgactattttgcatcataattgattttagatgtacaaatgaccaaaat 8551243  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 363
Target Start/End: Original strand, 28020528 - 28020561
Alignment:
Q  330 aagtgatttgtatgaaaaatgttgtttggatatt 363  Q
    |||||||||||| |||||||||||||||||||||    
T  28020528 aagtgatttgtacgaaaaatgttgtttggatatt 28020561  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 21254892 - 21254943
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||| ||||||||||||| ||| ||| ||||||||||||||||||    
T  21254892 gaattgaatttgattaaaagtgagttgaatgtaa-ttgatttatgtttggata 21254943  T

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Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 404
Target Start/End: Complemental strand, 219733 - 219602
Alignment:
Q  272 tttggttaaaagtgagtttaatataaattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatca 371  Q
    |||| ||||||||||||| |||  ||| ||||||||||||||||||| | |  |  | ||||||||  ||||| | |||||||||||||||| ||| |||    
T  219733 tttgattaaaagtgagttgaatgaaaagtgatttatgtttggatatctttaagat-agaagtgattcttatgagagatgttgtttggatattttgtgtca 219635  T
Q  372 aaattgcttttggatgtgtaaatgaccaaaatg 404  Q
    ||||||||||| | | || ||||||||||||||    
T  219634 aaattgcttttagttatgaaaatgaccaaaatg 219602  T

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Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 253216 - 253164
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||| |||||||  |||| ||||||||||||||||||||    
T  253216 gaattgattttggttaaatgtgagttggatatgaattgatttatgtttggata 253164  T

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Target: scaffold0184 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 404
Target Start/End: Complemental strand, 7015 - 6911
Alignment:
Q  297 aattgatttatgtttggatatcctcacaagcaaaagtgatttgtatgaaaaatgttgtttggatattctgtatcaaaattgcttttggatgtgtaaatga 396  Q
    |||| ||||||||||||||| | ||| || |||||||||||||||| ||| |||||||||  ||||| | | ||||||||| ||||| ||||||||||||    
T  7015 aattaatttatgtttggata-cttcaaaa-caaaagtgatttgtataaaatatgttgtttaaatatt-tatgtcaaaattgattttgaatgtgtaaatga 6919  T
Q  397 ccaaaatg 404  Q
    ||||||||    
T  6918 ccaaaatg 6911  T

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Target: scaffold0369 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 8536 - 8485
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||| ||||||||||||||||||| || | ||||||||||||||||||||    
T  8536 aattgattttggttaaaagtgagtttgatgtgaattgatttatgtttggata 8485  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 118435 - 118475
Alignment:
Q  276 gttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  118435 gttaaaagtgagtttgatgtaaattgatttatgtttggata 118475  T

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Target: scaffold0217 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 2040 - 2091
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggat 315  Q
    ||||||| ||||||| ||| ||||||| |||| |||||||||||||||||||    
T  2040 gaattgattttggttcaaaatgagtttgatatgaattgatttatgtttggat 2091  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 301613 - 301562
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggat 315  Q
    ||||||| |||||| ||||||||||| | |||||||| ||||||||||||||    
T  301613 gaattgattttggtcaaaagtgagttgagtataaatttatttatgtttggat 301562  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 138507 - 138573
Alignment:
Q  251 aattgatttt-gtggaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    |||||||||| || ||||| | ||| |||||||||||| | || |||||||||||||||||||||||    
T  138507 aattgattttagttgaattaattttagttaaaagtgagctgaacataaattgatttatgtttggata 138573  T

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Target: scaffold0983 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 2282 - 2331
Alignment:
Q  265 aattgagtttggttaaaagtgagtttaatataaattgatttatgtttgga 314  Q
    |||||| ||||||||||||||||||| |  | ||||||||||||||||||    
T  2282 aattgattttggttaaaagtgagtttgaggtgaattgatttatgtttgga 2331  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 29136 - 29187
Alignment:
Q  264 gaattgagtttggttaaaagtgagtttaatataaattgatttatgtttggata 316  Q
    ||||||| |||||||||||||||||| ||| | |||||| |||||||||||||    
T  29136 gaattgattttggttaaaagtgagttgaatgtgaattga-ttatgtttggata 29187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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