View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1971_high_7 (Length: 235)
Name: NF1971_high_7
Description: NF1971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1971_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 26958220 - 26958002
Alignment:
| Q |
3 |
ttttttcattttgctgtatttaagatgaaatgatttttctcatctgaaaccttttcagcaaattctctgtttcaaccttagatggaagaggattctggtg |
102 |
Q |
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| T |
26958220 |
ttttttcattttgctgtatttaagatgaaatgatttttctcatctgaaaccttttcagcaaattctctgtttcaaccttagatggaagaggattctggtg |
26958121 |
T |
|
| Q |
103 |
cttttgtctatttggctttctttcctcctaattcaaatcattaaggtaagtttccctttcactcactaagaattgtattaagtttttcctttttaaaata |
202 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
26958120 |
cttttgtctatttggttttctttcctcctaattcaaatcattaaggtaagttttcctctcactcactaagaattgtattaagtttttcctttttaaaata |
26958021 |
T |
|
| Q |
203 |
aacaacttattgttggttt |
221 |
Q |
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||||||||||||||||||| |
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| T |
26958020 |
aacaacttattgttggttt |
26958002 |
T |
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