View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19721_high_20 (Length: 242)
Name: NF19721_high_20
Description: NF19721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19721_high_20 |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 44199318 - 44199542
Alignment:
| Q |
1 |
ttcgggctatggcctcgctcgcatatcctccttcttccccaaactcatgtggtccgagggatttaccatcgttggatcccctcttgatcattttcaacaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44199318 |
ttcgggctatggcctcgctcgcatatcctccttcttccccaaactcatgtggtctgagggatttaccatcgttggatcccctcttgatcattttcaacaa |
44199417 |
T |
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| Q |
101 |
ctttggcctcaagattatgccaaacactggtgagcgccattaagagtcttacattagatataatatactttgaaaaatacttttcaagtaaaatattatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44199418 |
ctttggcctcaagattatgccaaacactggtgagtgccattaagagtcttacattagatataatatactttgaaaaatacttttcaagtaaaatattatt |
44199517 |
T |
|
| Q |
201 |
tttcaacttatactcgtgtgatatc |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
44199518 |
tttcaacttatactcgtgtgatatc |
44199542 |
T |
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