View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19721_low_28 (Length: 226)
Name: NF19721_low_28
Description: NF19721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19721_low_28 |
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Alignment Details
Target: chr1 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 46 - 208
Target Start/End: Complemental strand, 52042451 - 52042289
Alignment:
| Q |
46 |
aggggagtttaagcatgaggcaatctaaaatttatgtttcctccatatataaatacaatttaaaaatttgtcgaatgattcatttacctctgttggcaac |
145 |
Q |
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| T |
52042451 |
aggggagtttaagcatgaggcaatctaaaatttatgtttcctccatatataaatacaatttataaatttgtcgaatgattcatttacgtctgttggcaac |
52042352 |
T |
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| Q |
146 |
cgcttatgacagctttcaccataatctatttttgaacctgccttgcaaattgcatcattacct |
208 |
Q |
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| T |
52042351 |
cgcttacgacagctttcaccataatctatttttgaacctgccttgcaaattgcatcattacct |
52042289 |
T |
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