View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19721_low_31 (Length: 208)

Name: NF19721_low_31
Description: NF19721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19721_low_31
NF19721_low_31
[»] chr3 (1 HSPs)
chr3 (1-99)||(36940078-36940176)


Alignment Details
Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 36940078 - 36940176
Alignment:
1 tgtgtgaccaatgcattttgttgggttgccattgtttgttactatatcgtatgttcaaaagatgccaaactccactattgtttattcaaagatatcatg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
36940078 tgtgtgaccaatgcattttgttgggttgccattgtttgttactatatcgtatgttcaaaagatgccaaactccattatagtttattcaaagatatcatg 36940176  T

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