View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19722_high_19 (Length: 328)

Name: NF19722_high_19
Description: NF19722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19722_high_19
NF19722_high_19
[»] chr2 (41 HSPs)
chr2 (1-292)||(1801534-1801841)
chr2 (57-110)||(4350738-4350791)
chr2 (50-102)||(12313135-12313187)
chr2 (50-101)||(5902511-5902562)
chr2 (59-102)||(28677630-28677673)
chr2 (50-104)||(787386-787440)
chr2 (59-104)||(43529829-43529874)
chr2 (61-101)||(8017491-8017531)
chr2 (61-101)||(33256797-33256837)
chr2 (50-105)||(32837376-32837431)
chr2 (57-104)||(33503061-33503108)
chr2 (62-104)||(43530085-43530127)
chr2 (67-104)||(1647290-1647327)
chr2 (59-104)||(4550801-4550846)
chr2 (45-102)||(40158774-40158831)
chr2 (59-104)||(40776068-40776113)
chr2 (65-105)||(43570466-43570507)
chr2 (52-92)||(23974456-23974496)
chr2 (49-101)||(38787684-38787736)
chr2 (59-114)||(42419840-42419893)
chr2 (65-112)||(35378509-35378555)
chr2 (50-101)||(38809383-38809434)
chr2 (59-105)||(41812062-41812109)
chr2 (59-102)||(44606081-44606124)
chr2 (59-101)||(1494417-1494459)
chr2 (58-104)||(16398441-16398487)
chr2 (50-111)||(24100975-24101037)
chr2 (59-93)||(32106770-32106804)
chr2 (59-96)||(2964780-2964817)
chr2 (59-104)||(13220487-13220532)
chr2 (59-104)||(15120237-15120282)
chr2 (60-93)||(16451184-16451217)
chr2 (59-104)||(27237864-27237909)
chr2 (60-101)||(38388744-38388785)
chr2 (50-102)||(40682356-40682409)
chr2 (69-102)||(43827934-43827967)
chr2 (57-93)||(449913-449949)
chr2 (57-93)||(13325636-13325672)
chr2 (59-99)||(18962008-18962048)
chr2 (50-120)||(30331788-30331860)
chr2 (61-93)||(41293135-41293167)
[»] chr1 (41 HSPs)
chr1 (174-286)||(9850292-9850404)
chr1 (50-102)||(38001652-38001704)
chr1 (50-101)||(37811909-37811960)
chr1 (50-92)||(49938814-49938856)
chr1 (60-104)||(10744355-10744399)
chr1 (68-104)||(35925744-35925780)
chr1 (62-102)||(38170664-38170704)
chr1 (50-104)||(2295150-2295205)
chr1 (59-102)||(4549904-4549947)
chr1 (59-102)||(5720982-5721025)
chr1 (50-104)||(31517702-31517756)
chr1 (58-92)||(41505751-41505785)
chr1 (59-104)||(4481984-4482029)
chr1 (61-102)||(10199381-10199422)
chr1 (59-102)||(5741663-5741706)
chr1 (57-104)||(6292547-6292593)
chr1 (45-100)||(49692009-49692064)
chr1 (51-105)||(51929501-51929556)
chr1 (59-104)||(3887602-3887648)
chr1 (50-104)||(4445762-4445816)
chr1 (70-104)||(4699597-4699631)
chr1 (61-102)||(5894151-5894193)
chr1 (50-88)||(9572062-9572100)
chr1 (59-93)||(10233618-10233652)
chr1 (66-112)||(15942725-15942771)
chr1 (66-104)||(24460385-24460423)
chr1 (59-89)||(38247397-38247427)
chr1 (67-101)||(43338173-43338207)
chr1 (57-102)||(47498807-47498853)
chr1 (48-105)||(10280702-10280759)
chr1 (71-104)||(11639399-11639432)
chr1 (59-104)||(37593655-37593700)
chr1 (63-104)||(44422753-44422794)
chr1 (59-103)||(5591937-5591981)
chr1 (50-90)||(6102223-6102262)
chr1 (60-104)||(7262490-7262534)
chr1 (59-95)||(12763386-12763422)
chr1 (50-102)||(19389958-19390010)
chr1 (50-102)||(29929583-29929635)
chr1 (58-105)||(37473456-37473504)
chr1 (67-103)||(37842334-37842370)
[»] chr4 (33 HSPs)
chr4 (174-286)||(54822692-54822805)
chr4 (50-102)||(1137768-1137820)
chr4 (50-105)||(56249577-56249632)
chr4 (50-104)||(7368016-7368070)
chr4 (50-88)||(21731617-21731655)
chr4 (50-100)||(52172783-52172833)
chr4 (59-104)||(1554979-1555024)
chr4 (59-112)||(23459675-23459727)
chr4 (61-102)||(37863927-37863968)
chr4 (50-102)||(28615391-28615442)
chr4 (61-92)||(22030270-22030301)
chr4 (59-102)||(39178237-39178280)
chr4 (59-102)||(42461307-42461350)
chr4 (59-105)||(2996626-2996672)
chr4 (50-104)||(21043197-21043251)
chr4 (50-92)||(29657451-29657493)
chr4 (50-92)||(39603131-39603173)
chr4 (50-104)||(42641601-42641655)
chr4 (50-104)||(50799992-50800046)
chr4 (71-104)||(1965995-1966028)
chr4 (63-104)||(22662222-22662263)
chr4 (63-104)||(22666701-22666742)
chr4 (59-104)||(25571314-25571359)
chr4 (69-110)||(30631871-30631912)
chr4 (61-102)||(44938772-44938813)
chr4 (59-100)||(50742807-50742848)
chr4 (50-105)||(13126537-13126593)
chr4 (50-102)||(19304982-19305034)
chr4 (50-105)||(25904184-25904240)
chr4 (60-92)||(39011099-39011131)
chr4 (61-104)||(49939923-49939967)
chr4 (61-101)||(51560262-51560302)
chr4 (62-105)||(54426096-54426140)
[»] chr8 (34 HSPs)
chr8 (50-112)||(6875484-6875546)
chr8 (59-104)||(42215277-42215322)
chr8 (50-105)||(2213461-2213516)
chr8 (59-102)||(12851232-12851275)
chr8 (59-134)||(25097400-25097474)
chr8 (50-112)||(28763414-28763477)
chr8 (50-104)||(2458528-2458582)
chr8 (50-92)||(26771332-26771374)
chr8 (50-104)||(29169898-29169952)
chr8 (67-104)||(3254279-3254316)
chr8 (59-104)||(7918417-7918462)
chr8 (50-98)||(2487970-2488018)
chr8 (68-104)||(10383939-10383975)
chr8 (65-101)||(13459702-13459738)
chr8 (50-102)||(16162816-16162868)
chr8 (59-102)||(32840956-32841000)
chr8 (50-104)||(1930089-1930144)
chr8 (58-105)||(13958053-13958100)
chr8 (50-101)||(39881683-39881734)
chr8 (57-103)||(926530-926576)
chr8 (60-102)||(8629512-8629554)
chr8 (59-93)||(10120822-10120856)
chr8 (66-104)||(29168643-29168681)
chr8 (58-104)||(32976435-32976481)
chr8 (57-102)||(33808359-33808405)
chr8 (50-104)||(38537645-38537699)
chr8 (59-101)||(40071806-40071848)
chr8 (57-102)||(779030-779075)
chr8 (59-96)||(7646268-7646305)
chr8 (71-104)||(9835883-9835916)
chr8 (52-93)||(10722689-10722730)
chr8 (61-94)||(27754468-27754501)
chr8 (59-103)||(34849158-34849203)
chr8 (50-90)||(42893451-42893491)
[»] chr5 (41 HSPs)
chr5 (50-105)||(10640006-10640062)
chr5 (50-104)||(17258845-17258899)
chr5 (50-104)||(39248153-39248207)
chr5 (59-96)||(499702-499739)
chr5 (50-102)||(11095457-11095509)
chr5 (50-104)||(16457940-16457995)
chr5 (61-104)||(42646945-42646988)
chr5 (50-104)||(37611177-37611231)
chr5 (50-104)||(37787907-37787961)
chr5 (59-104)||(4619761-4619806)
chr5 (59-100)||(12459972-12460013)
chr5 (60-92)||(29925908-29925940)
chr5 (61-104)||(39105518-39105562)
chr5 (67-102)||(2568714-2568749)
chr5 (50-97)||(3977369-3977416)
chr5 (61-92)||(7705970-7706001)
chr5 (50-93)||(11064732-11064775)
chr5 (50-101)||(11714826-11714877)
chr5 (45-104)||(37489040-37489098)
chr5 (57-104)||(38728456-38728503)
chr5 (50-93)||(41419385-41419428)
chr5 (50-104)||(41534495-41534547)
chr5 (70-104)||(3280696-3280730)
chr5 (50-92)||(3735119-3735161)
chr5 (50-92)||(16937844-16937886)
chr5 (66-100)||(17368734-17368768)
chr5 (59-89)||(24030146-24030176)
chr5 (59-107)||(3520628-3520677)
chr5 (59-104)||(6587078-6587123)
chr5 (67-104)||(15405991-15406028)
chr5 (67-104)||(18857377-18857414)
chr5 (50-103)||(32172708-32172761)
chr5 (51-104)||(36646248-36646301)
chr5 (71-104)||(37794681-37794714)
chr5 (59-104)||(38047850-38047895)
chr5 (59-104)||(40769741-40769786)
chr5 (60-93)||(41535447-41535480)
chr5 (52-93)||(42228105-42228146)
chr5 (50-102)||(10125680-10125732)
chr5 (60-104)||(34736498-34736542)
chr5 (51-99)||(36145670-36145718)
[»] chr3 (33 HSPs)
chr3 (50-99)||(49465627-49465676)
chr3 (58-104)||(29427615-29427661)
chr3 (59-104)||(21574544-21574589)
chr3 (50-114)||(34637946-34638007)
chr3 (67-104)||(45541625-45541662)
chr3 (50-102)||(43046722-43046774)
chr3 (69-104)||(5391933-5391968)
chr3 (69-104)||(39723381-39723416)
chr3 (59-104)||(402512-402558)
chr3 (59-93)||(21367733-21367767)
chr3 (59-101)||(54837005-54837047)
chr3 (67-104)||(39723219-39723256)
chr3 (50-103)||(51455764-51455817)
chr3 (59-104)||(53762365-53762410)
chr3 (50-105)||(31365149-31365205)
chr3 (50-102)||(44014760-44014812)
chr3 (48-91)||(3776350-3776393)
chr3 (59-90)||(47904051-47904082)
chr3 (60-98)||(23808036-23808074)
chr3 (59-101)||(24624267-24624309)
chr3 (58-104)||(30573884-30573930)
chr3 (50-92)||(31365270-31365312)
chr3 (61-102)||(34610778-34610820)
chr3 (61-105)||(20880529-20880574)
chr3 (51-92)||(37689296-37689337)
chr3 (60-93)||(46778162-46778195)
chr3 (57-102)||(47249455-47249500)
chr3 (56-104)||(15304315-15304363)
chr3 (65-93)||(22203496-22203524)
chr3 (50-90)||(28881720-28881760)
chr3 (66-98)||(36769949-36769981)
chr3 (61-101)||(39602183-39602223)
chr3 (50-102)||(42745094-42745146)
[»] chr6 (24 HSPs)
chr6 (61-104)||(20368153-20368196)
chr6 (58-104)||(31624144-31624191)
chr6 (59-104)||(10616684-10616729)
chr6 (69-104)||(696496-696531)
chr6 (50-104)||(769192-769246)
chr6 (67-104)||(696656-696693)
chr6 (67-104)||(1575949-1575986)
chr6 (59-104)||(27595538-27595583)
chr6 (50-110)||(32917245-32917305)
chr6 (50-98)||(33887890-33887938)
chr6 (67-102)||(17770593-17770628)
chr6 (61-104)||(28641722-28641765)
chr6 (61-104)||(34404698-34404741)
chr6 (59-104)||(9912161-9912207)
chr6 (50-104)||(26559201-26559255)
chr6 (50-104)||(27857412-27857466)
chr6 (59-100)||(2263250-2263291)
chr6 (45-110)||(9202947-9203012)
chr6 (59-92)||(30926586-30926619)
chr6 (59-104)||(33737624-33737669)
chr6 (61-101)||(8035121-8035161)
chr6 (61-93)||(9559511-9559543)
chr6 (66-102)||(33089562-33089598)
chr6 (66-102)||(33832251-33832287)
[»] chr7 (26 HSPs)
chr7 (50-102)||(36537964-36538016)
chr7 (48-104)||(36598316-36598372)
chr7 (69-104)||(43219785-43219820)
chr7 (59-104)||(425794-425840)
chr7 (67-104)||(15740390-15740427)
chr7 (67-104)||(43219623-43219660)
chr7 (57-102)||(43250668-43250713)
chr7 (57-105)||(48470097-48470146)
chr7 (67-131)||(30812165-30812229)
chr7 (50-93)||(3836645-3836688)
chr7 (59-109)||(17248601-17248652)
chr7 (66-101)||(19719063-19719098)
chr7 (50-104)||(21568456-21568511)
chr7 (50-101)||(29574587-29574638)
chr7 (67-101)||(9038168-9038202)
chr7 (50-92)||(19022546-19022588)
chr7 (50-84)||(19214367-19214401)
chr7 (62-104)||(28340394-28340436)
chr7 (67-104)||(11048081-11048118)
chr7 (59-104)||(18350702-18350747)
chr7 (59-104)||(30535617-30535662)
chr7 (59-92)||(33552822-33552855)
chr7 (70-102)||(1914471-1914503)
chr7 (67-110)||(25635553-25635597)
chr7 (66-105)||(33601387-33601427)
chr7 (50-102)||(33894683-33894735)
[»] scaffold0608 (1 HSPs)
scaffold0608 (59-104)||(9608-9653)
[»] scaffold0072 (1 HSPs)
scaffold0072 (70-110)||(5007-5047)
[»] scaffold0057 (1 HSPs)
scaffold0057 (50-93)||(24687-24730)
[»] scaffold0015 (1 HSPs)
scaffold0015 (59-104)||(68950-68995)


Alignment Details
Target: chr2 (Bit Score: 247; Significance: 1e-137; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 1801841 - 1801534
Alignment:
Q  1 atacaaaataaaaaaggaactacaaattgtgcatttaattgagcagaaa----------------ttgtgatattgtttgggagaacttatgaaaacagc 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||                |||||||||||||||||||||||||||||||||||    
T  1801841 atacaaaataaaaaaggaactacaaattgtgcatttaattgagcagaaagcagtggcataagcacttgtgatattgtttgggagaacttatgaaaacagc 1801742  T
Q  85 ttatgacatgttcataagcttattttcatatgttctgcaggatagcttatagattattgataagtggttataagcatgcacaaacctggtaaggacgatg 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1801741 ttatgacatgttcataagcttattttcatatgttctgcaggatagcttatagattattgataagtggttataagcatgcaaaaacctggtaaggacgatg 1801642  T
Q  185 agaaaagttgtgttgataaacatcattagcaatgttattaatttcaaatgcttcaattacttccgcgtttacttgtgctttcatcaaagagtatctctga 284  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1801641 agaaaagttgtgttgataaacatcattagcaatgttattaatttcaaatgcttcaattacttccgcgtttacttgtgctttcatcaaagagtatctctga 1801542  T
Q  285 ataatcat 292  Q
    || |||||    
T  1801541 atcatcat 1801534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 4350791 - 4350738
Alignment:
Q  57 attgtttgggagaacttatgaaaacagcttatgacatgttcataagcttatttt 110  Q
    |||||||| |||||||||||||||||||||||||||||||||||| || |||||    
T  4350791 attgtttgagagaacttatgaaaacagcttatgacatgttcataaactgatttt 4350738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 12313135 - 12313187
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||| |||||||||||||| |||||||||||||||||| ||||||||||||    
T  12313135 ttgtgagattgtttgggagaatttatgaaaacagcttatgccatgttcataag 12313187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 5902511 - 5902562
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataa 101  Q
    |||||| | ||||||| |||||||||||||||||||||||||||||||||||    
T  5902511 ttgtgagactgtttggaagaacttatgaaaacagcttatgacatgttcataa 5902562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 102
Target Start/End: Original strand, 28677630 - 28677673
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  28677630 tgtttgggagaacttatgaaaacagcttatgacattttcataag 28677673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 787440 - 787386
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| | |||||| |||||||||||||||||||||||||||||| ||||||||    
T  787440 ttgtgacactgtttgtgagaacttatgaaaacagcttatgacatgtccataagct 787386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 43529829 - 43529874
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||    
T  43529829 tgtttgggagaatttatgaaaacagcttatgccatgttcataagct 43529874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 8017531 - 8017491
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgacatgttcataa 101  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  8017531 tttgggagaacttatgaaaacagcttatgatatgttcataa 8017491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 33256837 - 33256797
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgacatgttcataa 101  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  33256837 tttgggagagcttatgaaaacagcttatgacatgttcataa 33256797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 32837431 - 32837376
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagctt 105  Q
    |||||| | |||||||||||||||||||||||||||||| |||||| ||| |||||    
T  32837431 ttgtgagactgtttgggagaacttatgaaaacagcttataacatgtccattagctt 32837376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 33503108 - 33503061
Alignment:
Q  57 attgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  33503108 attgtttgggagaatttatgaaatcagcttatgacattttcataagct 33503061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 43530085 - 43530127
Alignment:
Q  62 ttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||||||||||||| |||||||||||||| |||||    
T  43530085 ttgggagaacttatgaaaacagattatgacatgttcacaagct 43530127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 1647327 - 1647290
Alignment:
Q  67 agaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||||||||||||||||||| |||||||||    
T  1647327 agaacttatgaaaacagcttatgacatgctcataagct 1647290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 4550846 - 4550801
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||    
T  4550846 tgtttgggagagcttatggaaacaacttatgacatgttcataagct 4550801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 40158831 - 40158774
Alignment:
Q  45 agaaattgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||| |||||| | || ||||| ||||||||||||||||||||||||||||| |||||    
T  40158831 agaacttgtgagactgattgggggaacttatgaaaacagcttatgacatgtttataag 40158774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 40776068 - 40776113
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||    
T  40776068 tgtttggaagaacttatgaaaacagcttatgacatatgcataagct 40776113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 43570507 - 43570466
Alignment:
Q  65 ggagaacttatgaaaacagcttatgaca-tgttcataagctt 105  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  43570507 ggagaacttatgaaaacagcttatgacattgttcataagctt 43570466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 23974456 - 23974496
Alignment:
Q  52 gtgatattgtttgggagaacttatgaaaacagcttatgaca 92  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  23974456 gtgagattgttttggagaacttatgaaaacagcttatgaca 23974496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 38787684 - 38787736
Alignment:
Q  49 attgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataa 101  Q
    ||||||| |||||||||  |||||||||||||  |||||||||||||||||||    
T  38787684 attgtgagattgtttggaggaacttatgaaaattgcttatgacatgttcataa 38787736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 42419893 - 42419840
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagcttattttcata 114  Q
    |||||||||||||||| |||||||||||||||||| ||  | ||||||||||||||    
T  42419893 tgtttgggagaacttacgaaaacagcttatgacatttt--tcagcttattttcata 42419840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 35378509 - 35378555
Alignment:
Q  65 ggagaacttatgaaaacagcttatgacatgttcataagcttattttca 112  Q
    ||||||||||||||||||||| ||||| |||||||||| |||||||||    
T  35378509 ggagaacttatgaaaacagctgatgacttgttcataag-ttattttca 35378555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 38809434 - 38809383
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataa 101  Q
    |||||| | ||||||||||||||||| ||| |||||||||||||||| ||||    
T  38809434 ttgtgaaaatgtttgggagaacttattaaaccagcttatgacatgttaataa 38809383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 41812062 - 41812109
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgaca-tgttcataagctt 105  Q
    ||||||||||||||| |||||||||||||||||| | |||||||||||    
T  41812062 tgtttgggagaacttttgaaaacagcttatgacatttttcataagctt 41812109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 102
Target Start/End: Original strand, 44606081 - 44606124
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    ||||||| |||||||||||||||| |||||||||||| ||||||    
T  44606081 tgtttggaagaacttatgaaaacaacttatgacatgtccataag 44606124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 1494417 - 1494459
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataa 101  Q
    |||||| |||| ||||||||||||||||||||||||| |||||    
T  1494417 tgtttgagagagcttatgaaaacagcttatgacatgtccataa 1494459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 16398441 - 16398487
Alignment:
Q  58 ttgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||| |||||| |||||||||| |||||||||||| ||||||||    
T  16398441 ttgtttgagagaacatatgaaaacaacttatgacatgtccataagct 16398487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 24101037 - 24100975
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgac-atgttcataagcttattttc 111  Q
    |||||| | |||||||||||||||||| ||||| |||||||| || ||||||||||| |||||    
T  24101037 ttgtgagactgtttgggagaacttatggaaacaccttatgacaatattcataagctttttttc 24100975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 32106770 - 32106804
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacat 93  Q
    |||||| ||||||||||||||||||||||||||||    
T  32106770 tgtttgtgagaacttatgaaaacagcttatgacat 32106804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 2964780 - 2964817
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgtt 96  Q
    |||||| | |||||||||||||||||||||||||||||    
T  2964780 tgtttgagtgaacttatgaaaacagcttatgacatgtt 2964817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 13220532 - 13220487
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| |||||||||| |||||| |||||||| ||||||||||||    
T  13220532 tgtttgagagaacttataaaaacaacttatgacttgttcataagct 13220487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 15120282 - 15120237
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||||| |||||| ||||| |||||||||||||||| ||||    
T  15120282 tgtttgggagagcttatggaaacaacttatgacatgttcattagct 15120237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 16451217 - 16451184
Alignment:
Q  60 gtttgggagaacttatgaaaacagcttatgacat 93  Q
    ||||||||||||||||||||||| ||||||||||    
T  16451217 gtttgggagaacttatgaaaacaacttatgacat 16451184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 27237864 - 27237909
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||| |||||||||  |||||||||||||||||| ||||||||    
T  27237864 tgtttggtagaacttatagaaacagcttatgacatgtacataagct 27237909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 38388785 - 38388744
Alignment:
Q  60 gtttgggagaacttatgaaaacagcttatgacatgttcataa 101  Q
    |||||||||||||||||  |||| ||||||||||||||||||    
T  38388785 gtttgggagaacttatggtaacaacttatgacatgttcataa 38388744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 40682356 - 40682409
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgaca-tgttcataag 102  Q
    |||||| ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  40682356 ttgtgagattgtttgggagaacttgttaaaatagcttatgacattgttcataag 40682409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 102
Target Start/End: Original strand, 43827934 - 43827967
Alignment:
Q  69 aacttatgaaaacagcttatgacatgttcataag 102  Q
    ||||||| ||||||||||||||||||||||||||    
T  43827934 aacttataaaaacagcttatgacatgttcataag 43827967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 449949 - 449913
Alignment:
Q  57 attgtttgggagaacttatgaaaacagcttatgacat 93  Q
    |||||||||||| |||| |||||||||||||||||||    
T  449949 attgtttgggaggacttttgaaaacagcttatgacat 449913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 13325672 - 13325636
Alignment:
Q  57 attgtttgggagaacttatgaaaacagcttatgacat 93  Q
    |||||| |||||||||| |||||||||||||||||||    
T  13325672 attgttcgggagaacttttgaaaacagcttatgacat 13325636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 99
Target Start/End: Original strand, 18962008 - 18962048
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcat 99  Q
    |||| |||||| |||||||||||||| ||||||||||||||    
T  18962008 tgttcgggagagcttatgaaaacagcatatgacatgttcat 18962048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 30331860 - 30331788
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgac-atgttcataagc-ttattttcatatgttct 120  Q
    |||||| | |||||||||||||||||||||| | |||||||| || |||| |||| ||||||||||| |||||    
T  30331860 ttgtgagactgtttgggagaacttatgaaaaaaccttatgacaattttcacaagctttattttcataagttct 30331788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 41293135 - 41293167
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgacat 93  Q
    ||||||||||||||| |||||||||||||||||    
T  41293135 tttgggagaacttataaaaacagcttatgacat 41293167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 174 - 286
Target Start/End: Original strand, 9850292 - 9850404
Alignment:
Q  174 taaggacgatgagaaaagttgtgttgataaacatcattagcaatgttattaatttcaaatgcttcaattacttccgcgtttacttgtgctttcatcaaag 273  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||| || |    
T  9850292 taagggcgatgagaaaagttatgttgataaacatcattagcaatgttattgatttcaaatgcttcaattacttccgcgattaattgtgctttcataaacg 9850391  T
Q  274 agtatctctgaat 286  Q
    |||||||||||||    
T  9850392 agtatctctgaat 9850404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 38001704 - 38001652
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||| | ||||||||||||||||||||||||||||||||| ||||||||||    
T  38001704 ttgtgagactgtttgggagaacttatgaaaacagcttatgacctgttcataag 38001652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 37811960 - 37811909
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataa 101  Q
    |||||||| || ||| ||||||||||||||||||||||||||||||||||||    
T  37811960 ttgtgatactggttgagagaacttatgaaaacagcttatgacatgttcataa 37811909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 49938856 - 49938814
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgaca 92  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  49938856 ttgtgagattgtttgggagaacttatgaaaacagcttatgaca 49938814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 10744399 - 10744355
Alignment:
Q  60 gtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||    
T  10744399 gtttgggagaacttgtgaaaacagcttatggcatgttcataagct 10744355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 35925780 - 35925744
Alignment:
Q  68 gaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||||||||||||||||||||||||||||    
T  35925780 gaacttatgaaaacagcttatgacatgttcataagct 35925744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 38170664 - 38170704
Alignment:
Q  62 ttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  38170664 ttgggagagcttatgaaaacagcttatgacatgttcataag 38170704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 2295205 - 2295150
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgac-atgttcataagct 104  Q
    |||||| | ||||||||||||||||||||||||||||||||| || ||||||||||    
T  2295205 ttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcataagct 2295150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 102
Target Start/End: Complemental strand, 4549947 - 4549904
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||    
T  4549947 tgtttgggagaacttctgaaaacagattatgacatgttcataag 4549904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 102
Target Start/End: Complemental strand, 5721025 - 5720982
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    ||||||||||||||||||||||||||||||||||  ||||||||    
T  5721025 tgtttgggagaacttatgaaaacagcttatgacaatttcataag 5720982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 31517702 - 31517756
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| | ||||||||||||||||| |||||| || ||||||||||||||||||    
T  31517702 ttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagct 31517756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 41505785 - 41505751
Alignment:
Q  58 ttgtttgggagaacttatgaaaacagcttatgaca 92  Q
    |||||||||||||||||||||||||||||||||||    
T  41505785 ttgtttgggagaacttatgaaaacagcttatgaca 41505751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 4482029 - 4481984
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||    
T  4482029 tgtttgagagaacttatgaaaacaacttattacatgttcataagct 4481984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 10199381 - 10199422
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  10199381 tttgggagaactcatgaaaatagcttatgacatgttcataag 10199422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 102
Target Start/End: Complemental strand, 5741706 - 5741663
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||||||||||||||||||||| |||||||||  ||||||||    
T  5741706 tgtttgggagaacttatgaaaacaacttatgacaatttcataag 5741663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 6292593 - 6292547
Alignment:
Q  57 attgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||||| || | ||||||||||||||||||||||||||||    
T  6292593 attgtttgggagaattttt-aaaacagcttatgacatgttcataagct 6292547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 49692009 - 49692064
Alignment:
Q  45 agaaattgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcata 100  Q
    |||| |||||| | |||||| ||||||||||||||| |||||||||||||| ||||    
T  49692009 agaacttgtgagactgtttgagagaacttatgaaaatagcttatgacatgtccata 49692064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 51929501 - 51929556
Alignment:
Q  51 tgtgatattgtttgggagaacttatgaaaacagcttatgac-atgttcataagctt 105  Q
    ||||| |||||||||||||| | |||||||||||||||||| || |||||||||||    
T  51929501 tgtgagattgtttgggagaattcatgaaaacagcttatgacaattttcataagctt 51929556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 3887602 - 3887648
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgaca-tgttcataagct 104  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||||    
T  3887602 tgtttggaagaacttatgaaaacatcttatgacattgttcataagct 3887648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 4445816 - 4445762
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| | |||||||||||| |||||||| |||||||| ||||||||| |||||    
T  4445816 ttgtgagactgtttgggagaatttatgaaagcagcttataacatgttcagaagct 4445762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 4699597 - 4699631
Alignment:
Q  70 acttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||||||| |||||||||||||||||||||    
T  4699597 acttatgaaaacaacttatgacatgttcataagct 4699631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 5894151 - 5894193
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgaca-tgttcataag 102  Q
    ||||||||||||||||||||||||||||| || ||||||||||    
T  5894151 tttgggagaacttatgaaaacagcttatgtcattgttcataag 5894193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 9572062 - 9572100
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttat 88  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  9572062 ttgtgagactgtttgggagaacttatgaaaacagcttat 9572100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 10233618 - 10233652
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacat 93  Q
    ||||||| |||||||||||||||||||||||||||    
T  10233618 tgtttggaagaacttatgaaaacagcttatgacat 10233652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 15942725 - 15942771
Alignment:
Q  66 gagaacttatgaaaacagcttatgacatgttcataagcttattttca 112  Q
    ||||| ||||||||||| |||||||||||||||||||| | ||||||    
T  15942725 gagaatttatgaaaacaacttatgacatgttcataagcatgttttca 15942771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 24460385 - 24460423
Alignment:
Q  66 gagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  24460385 gagaaattatgaaaatagcttatgacatgttcataagct 24460423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 89
Target Start/End: Complemental strand, 38247427 - 38247397
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatg 89  Q
    |||||||||||||||||||||||||||||||    
T  38247427 tgtttgggagaacttatgaaaacagcttatg 38247397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 43338207 - 43338173
Alignment:
Q  67 agaacttatgaaaacagcttatgacatgttcataa 101  Q
    |||||||||| ||||||||||||||||||||||||    
T  43338207 agaacttatggaaacagcttatgacatgttcataa 43338173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 47498807 - 47498853
Alignment:
Q  57 attgtttgggagaacttatgaaaacagcttatgaca-tgttcataag 102  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||    
T  47498807 attgtttgggagaacttatgaaaatagcttatgatattgttcataag 47498853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 10280759 - 10280702
Alignment:
Q  48 aattgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagctt 105  Q
    |||||||| | ||||  |||||||||||||||||| |||||  |||||||||||||||    
T  10280759 aattgtgacactgttcaggagaacttatgaaaacaacttatttcatgttcataagctt 10280702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 11639399 - 11639432
Alignment:
Q  71 cttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||||||||||||||||||| ||||||||    
T  11639399 cttatgaaaacagcttatgacatgtccataagct 11639432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 37593655 - 37593700
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||| |||| ||||| ||| |||||||||||||||||||||    
T  37593655 tgtttgggaaaactaatgaacacaacttatgacatgttcataagct 37593700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 44422794 - 44422753
Alignment:
Q  63 tgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||| |||||||||| |||||||||||||| ||||||||    
T  44422794 tgggagagcttatgaaaatagcttatgacatgtccataagct 44422753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 5591937 - 5591981
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagc 103  Q
    |||||| |||| |||||||||||||||||||||| || |||||||    
T  5591937 tgtttgagagagcttatgaaaacagcttatgacacgtgcataagc 5591981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 6102262 - 6102223
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatga 90  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  6102262 ttgtgagattgtttgggagaac-tatgaaaacagcttatga 6102223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 7262490 - 7262534
Alignment:
Q  60 gtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||| ||||| ||||| |||||||||| |||||||||||||||||    
T  7262490 gttttggagagcttataaaaacagcttttgacatgttcataagct 7262534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 95
Target Start/End: Complemental strand, 12763422 - 12763386
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgt 95  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  12763422 tgttttggagaacttacgaaaacagcttatgacatgt 12763386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 19390010 - 19389958
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||| | ||||||||||||| |||||||| | ||||||| |||||||||||    
T  19390010 ttgtgacactgtttgggagaacgtatgaaaaaaacttatgatatgttcataag 19389958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 29929583 - 29929635
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||||| ||||| ||||| |||||||||||| || ||||||||| ||||||    
T  29929583 ttgtgatactgttttggagagcttatgaaaacaactcatgacatgtgcataag 29929635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 37473504 - 37473456
Alignment:
Q  58 ttgtttgggagaacttatgaaaacagcttatgaca-tgttcataagctt 105  Q
    |||||||||||||||| |||||||| ||||||||| | |||||||||||    
T  37473504 ttgtttgggagaacttttgaaaacaacttatgacatttttcataagctt 37473456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 37842334 - 37842370
Alignment:
Q  67 agaacttatgaaaacagcttatgacatgttcataagc 103  Q
    |||||||||||||||| || |||||||||||||||||    
T  37842334 agaacttatgaaaacatctaatgacatgttcataagc 37842370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 6e-34; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 174 - 286
Target Start/End: Original strand, 54822692 - 54822805
Alignment:
Q  174 taaggacgatgagaaaagttgtgttgataaacatcattagcaatgtta-ttaatttcaaatgcttcaattacttccgcgtttacttgtgctttcatcaaa 272  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||| |||| ||| |||||||||||| ||     
T  54822692 taagggcgatgagaaaagttatgttgataaacatcattagcaatgttatttgatttcaaatgcttcaattactttcgcgattaattgtgctttcataaat 54822791  T
Q  273 gagtatctctgaat 286  Q
    ||||||||||||||    
T  54822792 gagtatctctgaat 54822805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 1137820 - 1137768
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||| | ||||| |||||||||||||||||| |||||||||||||||||||    
T  1137820 ttgtgacactgtttaggagaacttatgaaaacatcttatgacatgttcataag 1137768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 56249632 - 56249577
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagctt 105  Q
    |||||| ||||||||| | ||||||| ||||||||||||||||| |||||||||||    
T  56249632 ttgtgagattgtttggaacaacttatcaaaacagcttatgacattttcataagctt 56249577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 7368016 - 7368070
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| | ||||||||||| || ||||||||||||||||||||||| |||||||    
T  7368016 ttgtgagactgtttgggagagctcatgaaaacagcttatgacatgtttataagct 7368070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 21731617 - 21731655
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttat 88  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  21731617 ttgtgagattgtttgggagaacttatgaaaacagcttat 21731655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 52172833 - 52172783
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcata 100  Q
    |||||| | |||| |||| ||||||||||||||||||||||||||||||||    
T  52172833 ttgtgagactgttggggaaaacttatgaaaacagcttatgacatgttcata 52172783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 1554979 - 1555024
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| ||||| ||||||||| |||||||||||||||||||||||    
T  1554979 tgtttgagagaatttatgaaaatagcttatgacatgttcataagct 1555024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 23459727 - 23459675
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagcttattttca 112  Q
    ||||| |||||||||||||||| ||||||||||||||| ||||| |||||||||    
T  23459727 tgtttcggagaacttatgaaaaaagcttatgacatgttaataag-ttattttca 23459675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 37863927 - 37863968
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  37863927 tttgagagaacttatgaaaacagcttatgacacgttcataag 37863968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 28615442 - 28615391
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  28615442 ttgtgagattgtttgg-agaacttatgaaaacagctaatgacattttcataag 28615391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 92
Target Start/End: Complemental strand, 22030301 - 22030270
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgaca 92  Q
    ||||||||||||||||||||||||||||||||    
T  22030301 tttgggagaacttatgaaaacagcttatgaca 22030270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 102
Target Start/End: Original strand, 39178237 - 39178280
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||    
T  39178237 tgtttgggagaacttatgaaaaccgcttatgacacgttaataag 39178280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 102
Target Start/End: Complemental strand, 42461350 - 42461307
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||    
T  42461350 tgtttgggagaacttatgaaaatagcctatgacgtgttcataag 42461307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 2996672 - 2996626
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagctt 105  Q
    |||||| |||| |||||||||||| |||||||||||| |||||||||    
T  2996672 tgtttgagagagcttatgaaaacaacttatgacatgtccataagctt 2996626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 21043197 - 21043251
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| | |||||||||||  ||||| ||||||||||||||| |||||||||||    
T  21043197 ttgtgagactgtttgggagaggttatggaaacagcttatgacacgttcataagct 21043251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 29657493 - 29657451
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgaca 92  Q
    |||||| |||| ||| |||||||||||||||||||||||||||    
T  29657493 ttgtgagattgcttgagagaacttatgaaaacagcttatgaca 29657451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 39603131 - 39603173
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgaca 92  Q
    |||||| | |||||||||||||||| |||||||||||||||||    
T  39603131 ttgtgagactgtttgggagaacttaggaaaacagcttatgaca 39603173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 42641601 - 42641655
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||| |||||   |||||||||||||||| ||||||||||||||| |||||    
T  42641601 ttgtgatactgttttcaagaacttatgaaaacaccttatgacatgttcacaagct 42641655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 50799992 - 50800046
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| |||||||||||||||| ||| ||||| ||||||||||||  |||||||    
T  50799992 ttgtgagattgtttgggagaactaatgtaaacaacttatgacatgtctataagct 50800046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 1966028 - 1965995
Alignment:
Q  71 cttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||| |||||||||||||||||||||    
T  1966028 cttatgaaaacaacttatgacatgttcataagct 1965995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 22662222 - 22662263
Alignment:
Q  63 tgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||||||||| | ||||||| |||||||||||||    
T  22662222 tgggagaacttatgaaaaaaacttatgatatgttcataagct 22662263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 22666701 - 22666742
Alignment:
Q  63 tgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||||||||| | ||||||| |||||||||||||    
T  22666701 tgggagaacttatgaaaaaaacttatgatatgttcataagct 22666742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 25571359 - 25571314
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||| |||||||||||| |||||| |||||| |||||||||||||    
T  25571359 tgtttaggagaacttatggaaacagtttatgatatgttcataagct 25571314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 30631912 - 30631871
Alignment:
Q  69 aacttatgaaaacagcttatgacatgttcataagcttatttt 110  Q
    ||||||| |||||| |||||| ||||||||||||||||||||    
T  30631912 aacttataaaaacaacttatggcatgttcataagcttatttt 30631871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 44938813 - 44938772
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||| |||||||||||||||||| ||||||||| ||||||||    
T  44938813 tttgagagaacttatgaaaacaggttatgacatattcataag 44938772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 100
Target Start/End: Original strand, 50742807 - 50742848
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcata 100  Q
    |||||| |||||||||||||||||| | ||||||||||||||    
T  50742807 tgtttgagagaacttatgaaaacagttcatgacatgttcata 50742848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 13126537 - 13126593
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgt-tcataagctt 105  Q
    |||||| | ||||||| ||||||||| ||||||||||||||||| | ||||||||||    
T  13126537 ttgtgagactgtttggaagaacttataaaaacagcttatgacatttatcataagctt 13126593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 19305034 - 19304982
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||| ||||| |||||||| || || |||||||||||||||||| ||||||    
T  19305034 ttgtgagattgtgtgggagaatttgtggaaacagcttatgacatgtccataag 19304982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 25904184 - 25904240
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgaca-tgttcataagctt 105  Q
    |||||| | ||||||||||| ||||||||||||||||||| || | |||||||||||    
T  25904184 ttgtgagactgtttgggagagcttatgaaaacagcttatgccatttttcataagctt 25904240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 39011099 - 39011131
Alignment:
Q  60 gtttgggagaacttatgaaaacagcttatgaca 92  Q
    |||||||||||| ||||||||||||||||||||    
T  39011099 gtttgggagaacatatgaaaacagcttatgaca 39011131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 49939923 - 49939967
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgaca-tgttcataagct 104  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||||    
T  49939923 tttggaagaacttatgaaaagagcttatgacattgttcataagct 49939967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 51560262 - 51560302
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgacatgttcataa 101  Q
    ||||||||| |||||||||||| ||||| ||||||||||||    
T  51560262 tttgggagaccttatgaaaacaccttatcacatgttcataa 51560302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 54426140 - 54426096
Alignment:
Q  62 ttgggagaacttatgaaaacagcttatgac-atgttcataagctt 105  Q
    ||||||||||||| |||||||||||||||| || |||||||||||    
T  54426140 ttgggagaacttaggaaaacagcttatgacaattttcataagctt 54426096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 8e-18; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 6875484 - 6875546
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagcttattttca 112  Q
    |||||||| ||||||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  6875484 ttgtgataatgtttgggagaacatatgaaaacagattatgatatgttcataagcttattttca 6875546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 42215277 - 42215322
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||    
T  42215277 tgtttgggagaactaatgaaaacagcttatgacttgttcataagct 42215322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 2213516 - 2213461
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagctt 105  Q
    |||||||| ||||||| || | ||||||||||||||||||||||||| ||||||||    
T  2213516 ttgtgatactgtttggtagtagttatgaaaacagcttatgacatgttgataagctt 2213461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 102
Target Start/End: Complemental strand, 12851275 - 12851232
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    ||||||||| |||||||||||||||||||| |||||||||||||    
T  12851275 tgtttgggaaaacttatgaaaacagcttataacatgttcataag 12851232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 25097474 - 25097400
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagcttattttcatatgttctgcaggatagcttat 134  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||||   |||||||| | ||| |||||||||||||    
T  25097474 tgtttgggagaacatatgagaacagctcatgacatgttcataagc-agttttcataagctctccaggatagcttat 25097400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 28763477 - 28763414
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgac-atgttcataagcttattttca 112  Q
    |||||| | |||||||||||||||||||||||||||||| || || ||||||||||| ||||||    
T  28763477 ttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctttttttca 28763414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 2458528 - 2458582
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| ||| ||| |||||||||||||| |||||||||| ||||||||||||||    
T  2458528 ttgtgacattcttttggagaacttatgaagacagcttatggcatgttcataagct 2458582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 26771374 - 26771332
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgaca 92  Q
    |||||| | ||||||||||||||||||||||||||||||||||    
T  26771374 ttgtgagactgtttgggagaacttatgaaaacagcttatgaca 26771332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 29169898 - 29169952
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| ||||||||||||| |||||||||||||| |||||||| | ||||||||    
T  29169898 ttgtgaaattgtttgggagagcttatgaaaacagcatatgacatatccataagct 29169952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 3254316 - 3254279
Alignment:
Q  67 agaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||| |||||||||||||||||||||||||||||    
T  3254316 agaacttaagaaaacagcttatgacatgttcataagct 3254279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 7918417 - 7918462
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||||| |||||||||||| |||| ||||||||||||||||    
T  7918417 tgtttgggagagcttatgaaaacaacttaagacatgttcataagct 7918462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 2487970 - 2488018
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttca 98  Q
    |||||| | |||||||||||||||||||||||| ||||| |||||||||    
T  2487970 ttgtgagactgtttgggagaacttatgaaaacaacttataacatgttca 2488018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 10383975 - 10383939
Alignment:
Q  68 gaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||||||||||||||||| ||||||||||    
T  10383975 gaacttatgaaaacagcttatgacattttcataagct 10383939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 13459738 - 13459702
Alignment:
Q  65 ggagaacttatgaaaacagcttatgacatgttcataa 101  Q
    ||||||||||||||||||||||||||||| |||||||    
T  13459738 ggagaacttatgaaaacagcttatgacattttcataa 13459702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 16162868 - 16162816
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||| | |||||| || ||||||||||||||||||||||| ||||||||||    
T  16162868 ttgtgagactgtttgagaaaacttatgaaaacagcttatgacctgttcataag 16162816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 102
Target Start/End: Original strand, 32840956 - 32841000
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgaca-tgttcataag 102  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||    
T  32840956 tgtttgggagaacttatgaaaacaacttatgacattgttcataag 32841000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 1930144 - 1930089
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgaca-tgttcataagct 104  Q
    |||||| ||| ||||||||||||| ||||||||| |||||||| ||||||||||||    
T  1930144 ttgtgacattatttgggagaacttgtgaaaacagtttatgacattgttcataagct 1930089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 13958053 - 13958100
Alignment:
Q  58 ttgtttgggagaacttatgaaaacagcttatgacatgttcataagctt 105  Q
    |||||||||||||||| ||||||||  ||||||||| |||||||||||    
T  13958053 ttgtttgggagaacttttgaaaacaaattatgacattttcataagctt 13958100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 39881683 - 39881734
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataa 101  Q
    |||||| ||||||||| ||| ||| |||||| ||||||||||||||||||||    
T  39881683 ttgtgagattgtttggaagagcttgtgaaaatagcttatgacatgttcataa 39881734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 926576 - 926530
Alignment:
Q  57 attgtttgggagaacttatgaaaacagcttatgacatgttcataagc 103  Q
    |||| ||||||||| |||| |||||| ||||||||||||||||||||    
T  926576 attggttgggagaatttatcaaaacaacttatgacatgttcataagc 926530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 102
Target Start/End: Complemental strand, 8629554 - 8629512
Alignment:
Q  60 gtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||    
T  8629554 gtttgagagaacttatgaaaacaacttatgacatgatcataag 8629512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 93
Target Start/End: Complemental strand, 10120856 - 10120822
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacat 93  Q
    |||||| ||||||||||||||||||||||||||||    
T  10120856 tgtttgagagaacttatgaaaacagcttatgacat 10120822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 29168643 - 29168681
Alignment:
Q  66 gagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  29168643 gagagcttatgaaaacagcttatgacatgtccataagct 29168681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 32976481 - 32976435
Alignment:
Q  58 ttgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||||||||| ||||||| | | |||||||||||||||||||    
T  32976481 ttgtttgggagaactaatgaaaataccatatgacatgttcataagct 32976435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 33808405 - 33808359
Alignment:
Q  57 attgtttgggagaacttatgaaaacagcttatgaca-tgttcataag 102  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||    
T  33808405 attgtttgggagaacttatgaaaatagcttatgatattgttcataag 33808359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 38537699 - 38537645
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| |||||| ||| ||||||||||||||| |||| |||||| |||||||||    
T  38537699 ttgtgacattgttcgggggaacttatgaaaacaacttacgacatgctcataagct 38537645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 40071848 - 40071806
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataa 101  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||    
T  40071848 tgtttgggagagcttatggaaacaacttatgacatgttcataa 40071806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 779030 - 779075
Alignment:
Q  57 attgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    ||||||||  |||||||| ||||||| |||||||||||||||||||    
T  779030 attgtttgaaagaacttacgaaaacaacttatgacatgttcataag 779075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 7646305 - 7646268
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgtt 96  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  7646305 tgtttgggagaatttatgaaaactgcttatgacatgtt 7646268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 9835883 - 9835916
Alignment:
Q  71 cttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| |||||||||||||||||||||||||||    
T  9835883 cttatgtaaacagcttatgacatgttcataagct 9835916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 10722730 - 10722689
Alignment:
Q  52 gtgatattgtttgggagaacttatgaaaacagcttatgacat 93  Q
    |||| |||||||||||||| ||||| ||||||||||||||||    
T  10722730 gtgagattgtttgggagaatttatggaaacagcttatgacat 10722689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 27754501 - 27754468
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgacatg 94  Q
    ||||||||||||||||||||||| ||||||||||    
T  27754501 tttgggagaacttatgaaaacagtttatgacatg 27754468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 34849203 - 34849158
Alignment:
Q  59 tgtttgggagaacttatgaaaacagc-ttatgacatgttcataagc 103  Q
    |||||||||||||| ||||||||| | |||||||||||||||||||    
T  34849203 tgtttgggagaactaatgaaaacaactttatgacatgttcataagc 34849158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 42893451 - 42893491
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatga 90  Q
    ||||| || ||||||||||||||||| ||||||||||||||    
T  42893451 ttgtgctagtgtttgggagaacttataaaaacagcttatga 42893491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 10640062 - 10640006
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgaca-tgttcataagctt 105  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  10640062 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatttttcataagctt 10640006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 17258845 - 17258899
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| ||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  17258845 ttgtgacattctttgggagaacctatgaaaatagcttatgacatgttcataagct 17258899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 39248207 - 39248153
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| | ||||||||||||||||| ||||||||||||||| ||||||||||||    
T  39248207 ttgtgagactgtttgggagaacttataaaaacagcttatgacttgttcataagct 39248153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 499702 - 499739
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgtt 96  Q
    ||||||||||||||||||||||||||||||||||||||    
T  499702 tgtttgggagaacttatgaaaacagcttatgacatgtt 499739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 11095457 - 11095509
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    ||||||||||||||| |||||||| || |||||||||||||||||| ||||||    
T  11095457 ttgtgatattgtttgagagaacttgtggaaacagcttatgacatgtccataag 11095509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 16457940 - 16457995
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgaca-tgttcataagct 104  Q
    |||||| | |||||||||||||||||||||||||||||||||| | ||||||||||    
T  16457940 ttgtgagactgtttgggagaacttatgaaaacagcttatgacagttttcataagct 16457995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 42646988 - 42646945
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  42646988 tttggaagaacttatgaaaatagcttatgacatgttcataagct 42646945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 37611177 - 37611231
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| |||||||| |||| |||||||||||| ||| |||||||||||||||||    
T  37611177 ttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagct 37611231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 37787907 - 37787961
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| |||||||| |||| |||||||||||| ||| |||||||||||||||||    
T  37787907 ttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagct 37787961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 4619806 - 4619761
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||||| |||||||||||| || ||||||||||||||||||    
T  4619806 tgtttgggagagcttatgaaaacaactaatgacatgttcataagct 4619761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 100
Target Start/End: Original strand, 12459972 - 12460013
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcata 100  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  12459972 tgtttgggagaacctatgaaaacaacttatgacatgttcata 12460013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 29925940 - 29925908
Alignment:
Q  60 gtttgggagaacttatgaaaacagcttatgaca 92  Q
    |||||||||||||||||||||||||||||||||    
T  29925940 gtttgggagaacttatgaaaacagcttatgaca 29925908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 39105562 - 39105518
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgaca-tgttcataagct 104  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||    
T  39105562 tttgggagaatttatgaaaacagcttatgacattgttcataagct 39105518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 102
Target Start/End: Complemental strand, 2568749 - 2568714
Alignment:
Q  67 agaacttatgaaaacagcttatgacatgttcataag 102  Q
    ||||||||||||||||||||||||||| ||||||||    
T  2568749 agaacttatgaaaacagcttatgacatattcataag 2568714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 3977416 - 3977369
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttc 97  Q
    |||||| ||||||| | | |||||||||||||||||||||||||||||    
T  3977416 ttgtgagattgtttagaaaaacttatgaaaacagcttatgacatgttc 3977369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 92
Target Start/End: Original strand, 7705970 - 7706001
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgaca 92  Q
    ||||||||||||||||||||||||||||||||    
T  7705970 tttgggagaacttatgaaaacagcttatgaca 7706001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 11064775 - 11064732
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacat 93  Q
    |||||| |||||||| ||||||||||||||| ||||||||||||    
T  11064775 ttgtgagattgtttgagagaacttatgaaaatagcttatgacat 11064732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 11714826 - 11714877
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataa 101  Q
    |||||| || |||||||||||||||| ||||||| ||| |||||||||||||    
T  11714826 ttgtgagatagtttgggagaacttataaaaacagattaggacatgttcataa 11714877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 37489040 - 37489098
Alignment:
Q  45 agaaattgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||| |||||| |||||||||  ||||||||||||||| ||||||||||||| |||||||    
T  37489040 agaacttgtgagattgtttggc-gaacttatgaaaacaacttatgacatgttgataagct 37489098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 38728503 - 38728456
Alignment:
Q  57 attgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||||||| |||||||||| ||||||||||||| || ||||||    
T  38728503 attgtttgggagagcttatgaaaatagcttatgacatgctcctaagct 38728456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 41419428 - 41419385
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacat 93  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||    
T  41419428 ttgtgagattgtttgggataacttgtgaaaacagcttatgacat 41419385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 41534547 - 41534495
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| ||||||||||| ||||| |||||||||||||||||  |||||||||||    
T  41534547 ttgtgagattgtttgggataacttgtgaaaacagcttatgac--gttcataagct 41534495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 3280696 - 3280730
Alignment:
Q  70 acttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||||||||||||||| ||||||||||    
T  3280696 acttatgaaaacagcttatgacatcttcataagct 3280730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 3735119 - 3735161
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgaca 92  Q
    |||||||| ||||||| |||||| |||||||||||||||||||    
T  3735119 ttgtgatactgtttggtagaactgatgaaaacagcttatgaca 3735161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 16937844 - 16937886
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgaca 92  Q
    |||||| | ||||||| ||||||||||||||||||||||||||    
T  16937844 ttgtgagagtgtttggaagaacttatgaaaacagcttatgaca 16937886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 17368768 - 17368734
Alignment:
Q  66 gagaacttatgaaaacagcttatgacatgttcata 100  Q
    ||||||||||||||||| |||||||||||||||||    
T  17368768 gagaacttatgaaaacaacttatgacatgttcata 17368734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 89
Target Start/End: Original strand, 24030146 - 24030176
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatg 89  Q
    |||||||||||||||||||||||||||||||    
T  24030146 tgtttgggagaacttatgaaaacagcttatg 24030176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 3520677 - 3520628
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgac-atgttcataagcttat 107  Q
    |||||||||||||||||||||||| ||||||||  | |||||||||||||    
T  3520677 tgtttgggagaacttatgaaaacatcttatgacttttttcataagcttat 3520628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 6587078 - 6587123
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||| ||||||||  |||||||||||||||| |||||||||||    
T  6587078 tgtttggaagaacttaaaaaaacagcttatgacaggttcataagct 6587123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 15405991 - 15406028
Alignment:
Q  67 agaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  15405991 agaacttaccaaaacagcttatgacatgttcataagct 15406028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 18857377 - 18857414
Alignment:
Q  67 agaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  18857377 agaatttatgaaaacagctaatgacatgttcataagct 18857414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 32172761 - 32172708
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagc 103  Q
    |||||| || |||||||||| |||||| ||||| |||||||||||| |||||||    
T  32172761 ttgtgagatagtttgggagagcttatggaaacaacttatgacatgtccataagc 32172708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 36646301 - 36646248
Alignment:
Q  51 tgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||| |||| |||||| ||||| |||| ||||||||||||| |||||||||    
T  36646301 tgtgatactgttcgggagagcttataaaaatagcttatgacatggtcataagct 36646248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 37794681 - 37794714
Alignment:
Q  71 cttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||| |||||||||||||||||||||    
T  37794681 cttatgaaaacaacttatgacatgttcataagct 37794714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 38047850 - 38047895
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||||| |||||| ||||| |||||||||||| ||||||||    
T  38047850 tgtttgggagagcttatggaaacaacttatgacatgtccataagct 38047895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 40769741 - 40769786
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||| |||||||||| |||||||||||||| ||||| ||||||||    
T  40769741 tgtttaggagaacttacgaaaacagcttatgccatgtccataagct 40769786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 41535480 - 41535447
Alignment:
Q  60 gtttgggagaacttatgaaaacagcttatgacat 93  Q
    ||||||||||||||||||||||| ||||||||||    
T  41535480 gtttgggagaacttatgaaaacaacttatgacat 41535447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 42228146 - 42228105
Alignment:
Q  52 gtgatattgtttgggagaacttatgaaaacagcttatgacat 93  Q
    |||| |||||||||||||||||||| |||||||||| |||||    
T  42228146 gtgagattgtttgggagaacttatggaaacagcttaagacat 42228105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 10125680 - 10125732
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||| ||||| || ||||||||||| ||||| ||||||||||||| |||||    
T  10125680 ttgtgacattgtctgagagaacttatgtaaacaacttatgacatgttgataag 10125732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 34736498 - 34736542
Alignment:
Q  60 gtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||||| |||| |||||| |||||||||| |||||||    
T  34736498 gtttgggagaacttttgaacacagctaatgacatgtttataagct 34736542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 36145718 - 36145670
Alignment:
Q  51 tgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcat 99  Q
    ||||| |||| ||||||||| ||||||||||| |||| |||||||||||    
T  36145718 tgtgagattgattgggagaatttatgaaaacaacttacgacatgttcat 36145670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 49465627 - 49465676
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcat 99  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  49465627 ttgtgatattgtttcggagaacttatgaaaacagcttattacatgttcat 49465676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 29427615 - 29427661
Alignment:
Q  58 ttgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||    
T  29427615 ttgtttgggagaacttatgaaaacacctaatgacatgttcataagct 29427661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 21574589 - 21574544
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||    
T  21574589 tgtttgggagagcttatgaaaacaacttatgacatgttcataagct 21574544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 34637946 - 34638007
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagcttattttcata 114  Q
    |||||| |||||||||||||||||||||||||||||||| |||  ||||||||| ||||||||||    
T  34637946 ttgtgagattgtttgggagaacttatgaaaacagcttataaca--ttcataagc-tattttcata 34638007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 45541662 - 45541625
Alignment:
Q  67 agaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||||||||||||||||||||||||||||||||    
T  45541662 agaacttatgaaaacagcttatgacatgttcataagct 45541625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 43046774 - 43046722
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||| | |||||||||||||||||||||||||||| ||| |||||||||||    
T  43046774 ttgtgagactgtttgggagaacttatgaaaacagcttttgaaatgttcataag 43046722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 104
Target Start/End: Complemental strand, 5391968 - 5391933
Alignment:
Q  69 aacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  5391968 aacttatgaaaacagcttatgacatgttcataagct 5391933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 39723381 - 39723416
Alignment:
Q  69 aacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  39723381 aacttatgaaaacagcttatgacatgttcataagct 39723416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 402512 - 402558
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgaca-tgttcataagct 104  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||    
T  402512 tgtttgggagaacgtatgaaaacagcttatgacattgttcataagct 402558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 93
Target Start/End: Complemental strand, 21367767 - 21367733
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacat 93  Q
    |||||||||||||||||||||||||||||||||||    
T  21367767 tgtttgggagaacttatgaaaacagcttatgacat 21367733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 54837005 - 54837047
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataa 101  Q
    ||||||| |||| ||||||||||||||||||||||||||||||    
T  54837005 tgtttggaagaatttatgaaaacagcttatgacatgttcataa 54837047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 39723219 - 39723256
Alignment:
Q  67 agaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  39723219 agaacttatcaaaacagcttatgacatgttcataagct 39723256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 51455764 - 51455817
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagc 103  Q
    |||| ||||||||||||||| ||||||||||||   ||||||||||||||||||    
T  51455764 ttgttatattgtttgggagagcttatgaaaacaatgtatgacatgttcataagc 51455817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 53762365 - 53762410
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||| ||||||| || ||||||||||||||||||||||||||||||    
T  53762365 tgttagggagaaattttgaaaacagcttatgacatgttcataagct 53762410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 31365149 - 31365205
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgac-atgttcataagctt 105  Q
    |||||| | ||||||||||||||||||||| ||||||||||| || |||||||||||    
T  31365149 ttgtgagactgtttgggagaacttatgaaagcagcttatgacaattttcataagctt 31365205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 44014760 - 44014812
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||| | |||||| || ||||||||||||||||||||||| ||||||||||    
T  44014760 ttgtgagactgtttgagaaaacttatgaaaacagcttatgacctgttcataag 44014812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 3776350 - 3776393
Alignment:
Q  48 aattgtgatattgtttgggagaacttatgaaaacagcttatgac 91  Q
    |||||||| | |||||| ||||||||||||||||||||||||||    
T  3776350 aattgtgagaatgtttgagagaacttatgaaaacagcttatgac 3776393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 90
Target Start/End: Original strand, 47904051 - 47904082
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatga 90  Q
    ||||||||||||||||||||||||||||||||    
T  47904051 tgtttgggagaacttatgaaaacagcttatga 47904082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 23808036 - 23808074
Alignment:
Q  60 gtttgggagaacttatgaaaacagcttatgacatgttca 98  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  23808036 gtttgggaaaacttatgaaagcagcttatgacatgttca 23808074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 24624309 - 24624267
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataa 101  Q
    ||||||| ||| ||||||||||||||||||||||||| |||||    
T  24624309 tgtttggaagagcttatgaaaacagcttatgacatgtccataa 24624267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 30573884 - 30573930
Alignment:
Q  58 ttgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||| |||||||||||||||||  ||||| ||||||||||||||    
T  30573884 ttgtttgtgagaacttatgaaaacaaattatggcatgttcataagct 30573930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 31365270 - 31365312
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgaca 92  Q
    |||||| | |||||||||||||||||||| |||||||||||||    
T  31365270 ttgtgacactgtttgggagaacttatgaatacagcttatgaca 31365312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 34610778 - 34610820
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgaca-tgttcataag 102  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  34610778 tttgggagaacttatgaaaactgcttatgacattgttcataag 34610820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 20880574 - 20880529
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgac-atgttcataagctt 105  Q
    ||||||||||| ||||||||||||||||||| || |||||||||||    
T  20880574 tttgggagaacctatgaaaacagcttatgacaattttcataagctt 20880529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 37689337 - 37689296
Alignment:
Q  51 tgtgatattgtttgggagaacttatgaaaacagcttatgaca 92  Q
    ||||||| ||| |||||||||||| |||||||||||||||||    
T  37689337 tgtgatactgtatgggagaacttaagaaaacagcttatgaca 37689296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 46778162 - 46778195
Alignment:
Q  60 gtttgggagaacttatgaaaacagcttatgacat 93  Q
    ||||||||||||||||||||||| ||||||||||    
T  46778162 gtttgggagaacttatgaaaacaacttatgacat 46778195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 47249455 - 47249500
Alignment:
Q  57 attgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    ||||||||  |||||||||||||||  |||||||||||||||||||    
T  47249455 attgtttgaaagaacttatgaaaaccacttatgacatgttcataag 47249500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 15304315 - 15304363
Alignment:
Q  56 tattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||||| ||||||| ||| ||| ||||| |||||||||||||||    
T  15304315 tattgtttgggggaacttacgaacacaacttatcacatgttcataagct 15304363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 93
Target Start/End: Complemental strand, 22203524 - 22203496
Alignment:
Q  65 ggagaacttatgaaaacagcttatgacat 93  Q
    |||||||||||||||||||||||||||||    
T  22203524 ggagaacttatgaaaacagcttatgacat 22203496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 28881720 - 28881760
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatga 90  Q
    |||||| ||| ||||||||| ||||||||||||||||||||    
T  28881720 ttgtgagattatttgggagagcttatgaaaacagcttatga 28881760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 98
Target Start/End: Original strand, 36769949 - 36769981
Alignment:
Q  66 gagaacttatgaaaacagcttatgacatgttca 98  Q
    |||||||||||||||||||| ||||||||||||    
T  36769949 gagaacttatgaaaacagctcatgacatgttca 36769981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 39602183 - 39602223
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgacatgttcataa 101  Q
    ||||| ||| |||||||| ||||||||||||||||||||||    
T  39602183 tttggaagagcttatgaagacagcttatgacatgttcataa 39602223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 42745146 - 42745094
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||||||| ||| | |||| ||||| ||||| |||||||||||||||||||    
T  42745146 ttgtgatattatttagaagaatttatgtaaacaacttatgacatgttcataag 42745094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 20368153 - 20368196
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  20368153 tttgggagaacttatgaaaacaacttatgacatgttcataagct 20368196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 31624191 - 31624144
Alignment:
Q  58 ttgtttggga-gaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  31624191 ttgtttgggaagaacttatgaaaacagcttatgacatgttcataagct 31624144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 10616684 - 10616729
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||    
T  10616684 tgtttgggagaacttatcaaaacaccttatgacatgttcataagct 10616729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 104
Target Start/End: Complemental strand, 696531 - 696496
Alignment:
Q  69 aacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  696531 aacttatgaaaacagcttatgacatgttcataagct 696496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 769246 - 769192
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| | |||||||  ||||||||||||||| |||||||||||||||||||||    
T  769246 ttgtgagactgtttggatgaacttatgaaaacatcttatgacatgttcataagct 769192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 696693 - 696656
Alignment:
Q  67 agaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  696693 agaacttatcaaaacagcttatgacatgttcataagct 696656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 1575986 - 1575949
Alignment:
Q  67 agaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||||||| |||||||||||||||||||||    
T  1575986 agaacttatgaaaacaacttatgacatgttcataagct 1575949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 27595538 - 27595583
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||| ||||| ||||| |||||||||||||||||||||    
T  27595538 tgtttgggagaatttatggaaacaacttatgacatgttcataagct 27595583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 32917305 - 32917245
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagcttatttt 110  Q
    |||||| | ||||||||||| |||||| ||||| |||||||||||| ||||||||| ||||    
T  32917305 ttgtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagcttttttt 32917245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 33887938 - 33887890
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttca 98  Q
    |||||| |||||||| ||||| ||||||||| |||||||||||||||||    
T  33887938 ttgtgacattgtttgagagaatttatgaaaatagcttatgacatgttca 33887890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 102
Target Start/End: Original strand, 17770593 - 17770628
Alignment:
Q  67 agaacttatgaaaacagcttatgacatgttcataag 102  Q
    ||||||| ||||||||||||||||||||||||||||    
T  17770593 agaacttgtgaaaacagcttatgacatgttcataag 17770628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 28641722 - 28641765
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||| ||| |||||||||||||||||| |||||||||||||||    
T  28641722 tttggcagagcttatgaaaacagcttataacatgttcataagct 28641765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 34404698 - 34404741
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||||||||||| | |||||||||||| ||||||||    
T  34404698 tttgggagaacttatgaaaatatcttatgacatgtacataagct 34404741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 9912161 - 9912207
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgaca-tgttcataagct 104  Q
    ||||| ||||||||||||||| |||||||||||| ||||||||||||    
T  9912161 tgtttcggagaacttatgaaaccagcttatgacattgttcataagct 9912207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 26559201 - 26559255
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| | ||||||| |||||||||||||||| ||||||| ||||||| |||||    
T  26559201 ttgtgagactgtttggaagaacttatgaaaacaacttatgatatgttcacaagct 26559255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 27857466 - 27857412
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| | ||||||||||| |||||||||||| |||||||||| | ||||||||    
T  27857466 ttgtgaaactgtttgggagagcttatgaaaacaacttatgacatctccataagct 27857412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 100
Target Start/End: Complemental strand, 2263291 - 2263250
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcata 100  Q
    |||||| ||||||||||||||||| | |||||||||||||||    
T  2263291 tgtttgagagaacttatgaaaacaacatatgacatgttcata 2263250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 9202947 - 9203012
Alignment:
Q  45 agaaattgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagcttatttt 110  Q
    ||||||||||| | |||||| ||||||||||||||| | || ||| ||||||||||| || |||||    
T  9202947 agaaattgtgagactgtttgagagaacttatgaaaataactcatggcatgttcataaactgatttt 9203012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 30926619 - 30926586
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgaca 92  Q
    ||||||| ||||||||||||||||||||||||||    
T  30926619 tgtttggaagaacttatgaaaacagcttatgaca 30926586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 33737669 - 33737624
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| ||||||||||||| ||| |||||| ||||||||||||||    
T  33737669 tgtttgagagaacttatgaacacaacttatggcatgttcataagct 33737624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 8035121 - 8035161
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgacatgttcataa 101  Q
    |||||||||||||| ||||||| ||||||||||| ||||||    
T  8035121 tttgggagaacttaagaaaacaacttatgacatggtcataa 8035161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 9559511 - 9559543
Alignment:
Q  61 tttgggagaacttatgaaaacagcttatgacat 93  Q
    |||||||||||||||||||||| ||||||||||    
T  9559511 tttgggagaacttatgaaaacaacttatgacat 9559543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 33089598 - 33089562
Alignment:
Q  66 gagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||||||||||||||||||| |||||||| |||||    
T  33089598 gagaacttatgaaaacagcttaggacatgtttataag 33089562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 102
Target Start/End: Original strand, 33832251 - 33832287
Alignment:
Q  66 gagaacttatgaaaacagcttatgacatgttcataag 102  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  33832251 gagaacttatgaaaacaacttatgacatgtttataag 33832287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000008; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 36538016 - 36537964
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||| |||||||| ||||||||||| ||||| |||||||||||||||||||    
T  36538016 ttgtgagattgtttgagagaacttatggaaacaacttatgacatgttcataag 36537964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 36598316 - 36598372
Alignment:
Q  48 aattgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||| |||||||| |||| |||||| ||||| |||||||||||||||||||||    
T  36598316 aattgtgagattgtttgagagagcttatggaaacatcttatgacatgttcataagct 36598372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 43219785 - 43219820
Alignment:
Q  69 aacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  43219785 aacttatgaaaacagcttatgacatgttcataagct 43219820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 425794 - 425840
Alignment:
Q  59 tgtttgggagaacttatgaaaa-cagcttatgacatgttcataagct 104  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  425794 tgtttgggagaacttacgaaaaacagcttatgacatgttcataagct 425840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 15740390 - 15740427
Alignment:
Q  67 agaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||||||||||| |||||||||||||||||||||    
T  15740390 agaacttatgaaaacaacttatgacatgttcataagct 15740427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 43219623 - 43219660
Alignment:
Q  67 agaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  43219623 agaacttatcaaaacagcttatgacatgttcataagct 43219660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 43250668 - 43250713
Alignment:
Q  57 attgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||||||||  |||||||||||||||||||||||||||| ||||    
T  43250668 attgtttgggattacttatgaaaacagcttatgacatgttcgtaag 43250713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 105
Target Start/End: Complemental strand, 48470146 - 48470097
Alignment:
Q  57 attgtttgggagaacttatgaaaacagcttatgaca-tgttcataagctt 105  Q
    ||||||||||||||||||||||||||||||||| || | |||||||||||    
T  48470146 attgtttgggagaacttatgaaaacagcttatggcatttttcataagctt 48470097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 30812229 - 30812165
Alignment:
Q  67 agaacttatgaaaacagcttatgacatgttcataagcttattttcatatgttctgcaggatagct 131  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||| |||| | ||| || |||||||    
T  30812229 agaacttattaaaacggcttatgacatcttcataagcttatttccataagctctccatgatagct 30812165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 93
Target Start/End: Original strand, 3836645 - 3836688
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacat 93  Q
    |||||| | |||||||||||||||||||||| ||||||||||||    
T  3836645 ttgtgaaactgtttgggagaacttatgaaaatagcttatgacat 3836688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 17248652 - 17248601
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgaca-tgttcataagcttattt 109  Q
    ||||||||||||||||| |||||||||||| ||| |||||||||||| ||||    
T  17248652 tgtttgggagaacttataaaaacagcttataacattgttcataagctgattt 17248601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 101
Target Start/End: Complemental strand, 19719098 - 19719063
Alignment:
Q  66 gagaacttatgaaaacagcttatgacatgttcataa 101  Q
    ||||||||||||||||| ||||||||||||||||||    
T  19719098 gagaacttatgaaaacaacttatgacatgttcataa 19719063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 21568456 - 21568511
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgac-atgttcataagct 104  Q
    |||||| | |||||||||||||||||||||||||||||| || || ||||||||||    
T  21568456 ttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagct 21568511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 29574587 - 29574638
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataa 101  Q
    |||||| | ||||| |||||||||||| |||||||||||||||||| |||||    
T  29574587 ttgtgagactgtttcggagaacttatggaaacagcttatgacatgtccataa 29574638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 9038202 - 9038168
Alignment:
Q  67 agaacttatgaaaacagcttatgacatgttcataa 101  Q
    ||||||||| |||||||||||||||||||||||||    
T  9038202 agaacttataaaaacagcttatgacatgttcataa 9038168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 19022546 - 19022588
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgaca 92  Q
    |||||| |||||||||||||| ||||||||||| |||||||||    
T  19022546 ttgtgagattgtttgggagaatttatgaaaacaacttatgaca 19022588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Original strand, 19214367 - 19214401
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagc 84  Q
    |||||| ||||||||||||||||||||||||||||    
T  19214367 ttgtgagattgtttgggagaacttatgaaaacagc 19214401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 28340394 - 28340436
Alignment:
Q  62 ttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||||| |||||||||||| |||||||||||| ||||||||    
T  28340394 ttgggagagcttatgaaaacaacttatgacatgtccataagct 28340436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 11048118 - 11048081
Alignment:
Q  67 agaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  11048118 agaacttatcaaaacaacttatgacatgttcataagct 11048081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 18350702 - 18350747
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||| |||||||||||||||| ||||||  |||||||||||||||    
T  18350702 tgttttggagaacttatgaaaatagcttaaaacatgttcataagct 18350747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 30535662 - 30535617
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||| |||||||||||||||||| ||||||| |||||| ||||||    
T  30535662 tgttttggagaacttatgaaaacaacttatgatatgttcgtaagct 30535617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 33552822 - 33552855
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgaca 92  Q
    |||||||||||||||| |||||||||||||||||    
T  33552822 tgtttgggagaacttacgaaaacagcttatgaca 33552855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 102
Target Start/End: Complemental strand, 1914503 - 1914471
Alignment:
Q  70 acttatgaaaacagcttatgacatgttcataag 102  Q
    |||||| ||||||||||||||||||||||||||    
T  1914503 acttataaaaacagcttatgacatgttcataag 1914471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 25635553 - 25635597
Alignment:
Q  67 agaacttatgaaaacagcttatgaca-tgttcataagcttatttt 110  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||    
T  25635553 agaacttatgaaaacaacttatgatattgttcataagcttatttt 25635597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 33601387 - 33601427
Alignment:
Q  66 gagaacttatgaaaacagcttatgaca-tgttcataagctt 105  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  33601387 gagaacttatgaaaacagcttatgacacttttcataagctt 33601427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 33894735 - 33894683
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcataag 102  Q
    |||||| | |||||| |||| |||||||||||||| |||||||||| ||||||    
T  33894735 ttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccataag 33894683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 9608 - 9653
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||    
T  9608 tgtttgagagaacttatgaaaacaacttattacatgttcataagct 9653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 5047 - 5007
Alignment:
Q  70 acttatgaaaacagcttatgacatgttcataagcttatttt 110  Q
    |||||||||||||||||||||||||| |||||||| |||||    
T  5047 acttatgaaaacagcttatgacatgtccataagctgatttt 5007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 24730 - 24687
Alignment:
Q  50 ttgtgatattgtttgggagaacttatgaaaacagcttatgacat 93  Q
    |||||| | ||||||||||||||||| |||||||||||||||||    
T  24730 ttgtgagactgtttgggagaacttatcaaaacagcttatgacat 24687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 68950 - 68995
Alignment:
Q  59 tgtttgggagaacttatgaaaacagcttatgacatgttcataagct 104  Q
    ||||||||| |||||||||||||||| ||||||||||  |||||||    
T  68950 tgtttgggaaaacttatgaaaacagcgtatgacatgtctataagct 68995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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