View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19722_high_27 (Length: 217)
Name: NF19722_high_27
Description: NF19722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19722_high_27 |
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Alignment Details
Target: chr8 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 32881421 - 32881604
Alignment:
| Q |
18 |
ctaatcatatatcctatattgtccatcgaataaactactataaaatatcaatggccccaagcttgctggttcaaacaaatgcacgtgcttgaagtttgaa |
117 |
Q |
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| T |
32881421 |
ctaatcatatatcctatattgtccatcgaataaacta---taaaatatcaatggccccaagcttgctggttcaaacaaatgcacgtgcttgaagtttgaa |
32881517 |
T |
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| Q |
118 |
ttccaaagaggnnnnnnngtgattcatttctaatttgtgcaaaatgaaaagtgtgtatatattgtatagcttgttacatatctgtgc |
204 |
Q |
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| T |
32881518 |
ttccaaagaggaaaaaaagtgaataatttctaatttgtgcaaaatgaaaagtgtgtatatattggatagcttgttacatatctgtgc |
32881604 |
T |
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