View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19722_low_18 (Length: 372)
Name: NF19722_low_18
Description: NF19722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19722_low_18 |
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Alignment Details
Target: chr3 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 37 - 356
Target Start/End: Complemental strand, 26658033 - 26657713
Alignment:
| Q |
37 |
cacaaacgttaatatcacatccacccttacccaaaatatactgatacagggccggaccaacattgtatgaggctggcaaatttaaatatgagaccttttt |
136 |
Q |
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| T |
26658033 |
cacaaacgttaatatcacatccacccttacccaaaatatactgatacagggccggaccaacattgtatgaggctggcaaatttaaatatgagaccttttt |
26657934 |
T |
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| Q |
137 |
attacaaaagcggtataaggcaattgtcttggtgaccttaccctcgggccggtcatgtgttgatatgtagttagaaggaccagagttaccttctgatcat |
236 |
Q |
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| T |
26657933 |
attacaaaagcggtctaaggcaattgtcttggtgaccttacccttgggccggtcatgtgttgatatgtagttagaaggaccagagttaccttctgatcat |
26657834 |
T |
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| Q |
237 |
tccaactcttaccttctaaaccaacccattcactttataaccccaccgaatcagctttacaaatattatatggtgt-aagtgcaatcaacttgttctttc |
335 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |
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| T |
26657833 |
tccaactcttaccttctaaaccaacccattcactttataaccccaccgaatcagctttacaaatattatatgatgtaaagtgcaatcaacttgttctttt |
26657734 |
T |
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| Q |
336 |
aacggtgaaaagtgtaaacac |
356 |
Q |
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||| ||||||||||||||||| |
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| T |
26657733 |
aacagtgaaaagtgtaaacac |
26657713 |
T |
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