View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19723_low_23 (Length: 352)

Name: NF19723_low_23
Description: NF19723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19723_low_23
NF19723_low_23
[»] chr4 (61 HSPs)
chr4 (213-335)||(28114530-28114652)
chr4 (239-336)||(28130071-28130168)
chr4 (25-107)||(10139266-10139348)
chr4 (25-110)||(11199445-11199531)
chr4 (25-107)||(17622836-17622918)
chr4 (25-110)||(11968067-11968152)
chr4 (25-113)||(36191112-36191200)
chr4 (25-108)||(53273236-53273319)
chr4 (25-107)||(13892386-13892468)
chr4 (25-107)||(45020225-45020307)
chr4 (25-109)||(1165184-1165269)
chr4 (25-111)||(27289862-27289950)
chr4 (25-107)||(51152625-51152709)
chr4 (25-103)||(17549022-17549101)
chr4 (107-158)||(28114686-28114737)
chr4 (25-107)||(40949552-40949635)
chr4 (25-110)||(7364393-7364479)
chr4 (25-111)||(2414294-2414382)
chr4 (25-81)||(34662816-34662872)
chr4 (26-85)||(6940969-6941028)
chr4 (25-83)||(8150304-8150362)
chr4 (25-107)||(14639437-14639519)
chr4 (27-111)||(28118537-28118622)
chr4 (25-107)||(46047074-46047158)
chr4 (25-85)||(41145418-41145478)
chr4 (25-85)||(55210126-55210186)
chr4 (25-116)||(18137387-18137478)
chr4 (25-116)||(49124595-49124686)
chr4 (27-81)||(7401206-7401260)
chr4 (27-85)||(40848871-40848929)
chr4 (25-107)||(49908891-49908973)
chr4 (25-85)||(10582829-10582889)
chr4 (25-77)||(18003334-18003386)
chr4 (25-85)||(32201830-32201890)
chr4 (25-81)||(55990787-55990843)
chr4 (25-68)||(7404195-7404238)
chr4 (25-68)||(13859444-13859487)
chr4 (25-68)||(22556339-22556382)
chr4 (26-111)||(33505226-33505311)
chr4 (25-78)||(43116604-43116657)
chr4 (26-74)||(5752716-5752764)
chr4 (25-81)||(39656818-39656874)
chr4 (25-85)||(51186764-51186824)
chr4 (25-68)||(347506-347549)
chr4 (26-85)||(35715305-35715364)
chr4 (25-68)||(37874507-37874550)
chr4 (26-68)||(17730738-17730780)
chr4 (25-107)||(23627344-23627429)
chr4 (33-111)||(33505925-33506003)
chr4 (26-68)||(35716036-35716078)
chr4 (26-68)||(47559424-47559466)
chr4 (26-83)||(577596-577653)
chr4 (26-111)||(7646563-7646648)
chr4 (25-74)||(26108909-26108958)
chr4 (26-111)||(29347404-29347489)
chr4 (26-111)||(35833174-35833259)
chr4 (26-109)||(24305280-24305366)
chr4 (25-85)||(24631607-24631667)
chr4 (27-67)||(26098576-26098616)
chr4 (26-78)||(35710995-35711047)
chr4 (25-69)||(55187145-55187189)
[»] chr3 (56 HSPs)
chr3 (25-109)||(54740750-54740834)
chr3 (25-104)||(53021603-53021682)
chr3 (25-107)||(4017530-4017613)
chr3 (25-111)||(2908052-2908138)
chr3 (25-107)||(46756505-46756587)
chr3 (25-107)||(7264043-7264125)
chr3 (25-107)||(14588773-14588855)
chr3 (25-107)||(20997267-20997349)
chr3 (25-107)||(45600321-45600403)
chr3 (25-110)||(22348129-22348214)
chr3 (25-109)||(29498935-29499020)
chr3 (25-110)||(42189146-42189231)
chr3 (25-109)||(36593235-36593319)
chr3 (25-107)||(26880588-26880671)
chr3 (25-107)||(52459427-52459510)
chr3 (25-109)||(33933838-33933923)
chr3 (25-107)||(35530739-35530821)
chr3 (25-107)||(48543723-48543805)
chr3 (30-107)||(7039500-7039577)
chr3 (25-115)||(20859585-20859677)
chr3 (25-110)||(54196913-54196998)
chr3 (25-109)||(13336201-13336285)
chr3 (25-113)||(47671394-47671482)
chr3 (25-81)||(54511431-54511487)
chr3 (25-107)||(35907714-35907796)
chr3 (25-107)||(44223414-44223496)
chr3 (25-107)||(52673092-52673174)
chr3 (25-107)||(29449264-29449349)
chr3 (25-106)||(30270465-30270546)
chr3 (26-107)||(47718587-47718668)
chr3 (25-85)||(19535668-19535728)
chr3 (27-114)||(38360774-38360862)
chr3 (25-81)||(39720357-39720413)
chr3 (25-85)||(46851890-46851950)
chr3 (25-105)||(50931792-50931872)
chr3 (25-108)||(12102408-12102491)
chr3 (27-77)||(874476-874526)
chr3 (25-112)||(13448779-13448868)
chr3 (26-68)||(54112433-54112475)
chr3 (25-109)||(48960201-48960288)
chr3 (33-109)||(33873177-33873253)
chr3 (25-81)||(43317774-43317830)
chr3 (28-104)||(46089930-46090006)
chr3 (25-112)||(13166263-13166350)
chr3 (26-85)||(26039731-26039790)
chr3 (26-68)||(8393837-8393879)
chr3 (26-68)||(11601905-11601947)
chr3 (26-68)||(19895389-19895431)
chr3 (26-109)||(22474644-22474729)
chr3 (26-68)||(28981553-28981595)
chr3 (26-68)||(40831665-40831707)
chr3 (26-111)||(5238198-5238283)
chr3 (34-111)||(21732141-21732218)
chr3 (25-85)||(34435010-34435070)
chr3 (25-85)||(46091048-46091108)
chr3 (26-78)||(48522303-48522355)
[»] chr7 (56 HSPs)
chr7 (25-114)||(12906945-12907034)
chr7 (27-106)||(17276760-17276839)
chr7 (25-107)||(29450104-29450186)
chr7 (25-107)||(32961884-32961966)
chr7 (25-107)||(41425573-41425657)
chr7 (25-110)||(40241296-40241383)
chr7 (25-109)||(40788142-40788226)
chr7 (25-105)||(10998047-10998128)
chr7 (25-109)||(43154803-43154888)
chr7 (25-107)||(23640477-23640560)
chr7 (25-112)||(38044068-38044155)
chr7 (25-106)||(45619251-45619332)
chr7 (25-109)||(18957651-18957735)
chr7 (25-111)||(4493281-4493370)
chr7 (25-107)||(4407631-4407713)
chr7 (27-109)||(8791042-8791124)
chr7 (25-111)||(37670653-37670739)
chr7 (25-85)||(4410655-4410715)
chr7 (25-109)||(27032192-27032276)
chr7 (25-105)||(43110188-43110270)
chr7 (25-107)||(44652800-44652883)
chr7 (26-113)||(47168468-47168555)
chr7 (25-83)||(5525197-5525255)
chr7 (25-112)||(23153712-23153801)
chr7 (25-109)||(40036952-40037037)
chr7 (26-111)||(42830207-42830292)
chr7 (25-85)||(4409336-4409396)
chr7 (25-85)||(5482538-5482598)
chr7 (25-109)||(6605669-6605753)
chr7 (25-113)||(44550244-44550332)
chr7 (27-109)||(4409695-4409780)
chr7 (25-84)||(5484803-5484862)
chr7 (25-109)||(22345787-22345872)
chr7 (25-68)||(37311310-37311353)
chr7 (25-83)||(36758884-36758942)
chr7 (25-83)||(36764652-36764710)
chr7 (27-85)||(41344230-41344288)
chr7 (25-109)||(21135559-21135644)
chr7 (26-85)||(3792510-3792569)
chr7 (26-113)||(11498588-11498674)
chr7 (26-77)||(47839822-47839873)
chr7 (25-91)||(4409598-4409664)
chr7 (26-68)||(9144856-9144898)
chr7 (25-105)||(16934364-16934441)
chr7 (25-105)||(16939747-16939824)
chr7 (26-68)||(21670600-21670642)
chr7 (26-68)||(27737528-27737570)
chr7 (26-68)||(29683853-29683895)
chr7 (26-68)||(39276850-39276892)
chr7 (26-68)||(39650884-39650926)
chr7 (31-68)||(4495219-4495256)
chr7 (26-111)||(17814851-17814936)
chr7 (26-111)||(19052049-19052134)
chr7 (30-83)||(47138854-47138907)
chr7 (27-68)||(48529697-48529738)
chr7 (26-109)||(29683125-29683209)
[»] chr2 (36 HSPs)
chr2 (25-110)||(5165201-5165286)
chr2 (25-109)||(24927145-24927229)
chr2 (26-109)||(36581856-36581939)
chr2 (25-107)||(3325653-3325735)
chr2 (25-109)||(969096-969180)
chr2 (25-109)||(21843650-21843734)
chr2 (25-106)||(8876741-8876822)
chr2 (25-107)||(36579551-36579633)
chr2 (25-109)||(36087025-36087112)
chr2 (25-107)||(31970875-31970958)
chr2 (25-106)||(35422849-35422931)
chr2 (25-106)||(6034719-6034800)
chr2 (25-109)||(36079934-36080018)
chr2 (26-105)||(45473525-45473604)
chr2 (26-104)||(2179119-2179197)
chr2 (25-85)||(669268-669328)
chr2 (25-85)||(1834655-1834715)
chr2 (25-85)||(3244438-3244498)
chr2 (27-83)||(7228651-7228707)
chr2 (25-81)||(18171087-18171143)
chr2 (25-77)||(38961271-38961323)
chr2 (25-81)||(7273757-7273813)
chr2 (25-105)||(10119672-10119751)
chr2 (25-81)||(17052079-17052135)
chr2 (25-77)||(20642872-20642924)
chr2 (25-105)||(32291473-32291553)
chr2 (25-85)||(34911731-34911791)
chr2 (25-85)||(38708810-38708870)
chr2 (26-109)||(9919925-9920009)
chr2 (25-85)||(9922454-9922514)
chr2 (26-68)||(10049927-10049969)
chr2 (26-68)||(10823525-10823567)
chr2 (25-83)||(38878218-38878276)
chr2 (27-68)||(9545559-9545600)
chr2 (25-85)||(22077296-22077356)
chr2 (26-109)||(24521791-24521875)
[»] chr8 (40 HSPs)
chr8 (25-109)||(39684353-39684437)
chr8 (25-114)||(7217986-7218075)
chr8 (25-114)||(27466343-27466432)
chr8 (25-109)||(14717874-14717958)
chr8 (25-103)||(45499652-45499730)
chr8 (25-113)||(44907532-44907621)
chr8 (25-105)||(16242263-16242343)
chr8 (25-104)||(29570557-29570636)
chr8 (25-107)||(17047068-17047150)
chr8 (25-85)||(44604427-44604487)
chr8 (25-104)||(36217958-36218037)
chr8 (25-119)||(12261823-12261920)
chr8 (25-106)||(16843949-16844030)
chr8 (25-112)||(6746211-6746302)
chr8 (25-107)||(17314643-17314725)
chr8 (25-107)||(34804398-34804480)
chr8 (25-109)||(43819363-43819448)
chr8 (25-109)||(14451424-14451508)
chr8 (25-85)||(38139687-38139747)
chr8 (25-109)||(39994930-39995014)
chr8 (25-81)||(41359958-41360014)
chr8 (25-110)||(39524509-39524594)
chr8 (25-103)||(41525384-41525464)
chr8 (25-85)||(36060195-36060255)
chr8 (25-85)||(42983083-42983143)
chr8 (25-107)||(40049637-40049724)
chr8 (25-112)||(6656506-6656595)
chr8 (25-112)||(6736908-6736997)
chr8 (25-111)||(38138462-38138548)
chr8 (26-107)||(11923354-11923435)
chr8 (27-68)||(41152875-41152916)
chr8 (26-109)||(3750555-3750641)
chr8 (29-85)||(35003252-35003308)
chr8 (25-68)||(34996633-34996676)
chr8 (26-85)||(41153579-41153638)
chr8 (26-68)||(3749870-3749912)
chr8 (27-109)||(29868268-29868350)
chr8 (26-111)||(22358862-22358946)
chr8 (34-78)||(25346329-25346373)
chr8 (28-107)||(27747545-27747627)
[»] chr6 (25 HSPs)
chr6 (25-107)||(3849159-3849241)
chr6 (25-109)||(557537-557622)
chr6 (25-109)||(29042299-29042386)
chr6 (25-110)||(33946764-33946849)
chr6 (25-109)||(26183496-26183580)
chr6 (25-85)||(29975423-29975483)
chr6 (25-109)||(20790160-20790247)
chr6 (25-85)||(18595536-18595596)
chr6 (25-85)||(19988012-19988072)
chr6 (25-81)||(32244090-32244146)
chr6 (27-81)||(1949458-1949512)
chr6 (25-83)||(17504570-17504628)
chr6 (25-68)||(10944831-10944874)
chr6 (25-107)||(6019398-6019480)
chr6 (26-107)||(174924-175004)
chr6 (26-83)||(34207950-34208007)
chr6 (26-109)||(25530194-25530277)
chr6 (26-68)||(6832543-6832585)
chr6 (26-68)||(15045342-15045384)
chr6 (26-68)||(28193202-28193244)
chr6 (25-67)||(34248679-34248721)
chr6 (26-68)||(34317242-34317284)
chr6 (26-68)||(35133481-35133523)
chr6 (26-111)||(18311423-18311508)
chr6 (26-83)||(28193913-28193970)
[»] scaffold0179 (1 HSPs)
scaffold0179 (25-109)||(33820-33904)
[»] chr5 (39 HSPs)
chr5 (25-109)||(16051832-16051916)
chr5 (25-112)||(666624-666711)
chr5 (25-107)||(5590526-5590611)
chr5 (25-107)||(24757986-24758068)
chr5 (25-111)||(29384836-29384922)
chr5 (25-107)||(24029246-24029328)
chr5 (25-111)||(40306919-40307005)
chr5 (25-106)||(25819749-25819830)
chr5 (29-107)||(2476593-2476671)
chr5 (25-107)||(26378147-26378229)
chr5 (25-109)||(31940892-31940977)
chr5 (25-109)||(6930205-6930289)
chr5 (25-81)||(27178049-27178105)
chr5 (25-114)||(3244544-3244634)
chr5 (25-111)||(42112661-42112746)
chr5 (25-107)||(42321234-42321315)
chr5 (25-85)||(4375903-4375963)
chr5 (25-91)||(16167188-16167254)
chr5 (25-111)||(20338822-20338908)
chr5 (25-83)||(31885709-31885767)
chr5 (25-103)||(42415761-42415839)
chr5 (25-83)||(43395590-43395648)
chr5 (27-84)||(10041889-10041946)
chr5 (25-77)||(16939492-16939544)
chr5 (26-105)||(2529136-2529215)
chr5 (30-81)||(32263357-32263408)
chr5 (26-68)||(33708756-33708798)
chr5 (25-83)||(34442365-34442423)
chr5 (25-85)||(7535738-7535798)
chr5 (25-77)||(37146151-37146203)
chr5 (26-85)||(9813711-9813770)
chr5 (26-85)||(12591469-12591528)
chr5 (26-85)||(12705836-12705895)
chr5 (26-68)||(30140813-30140855)
chr5 (34-111)||(35542078-35542156)
chr5 (27-68)||(35381367-35381408)
chr5 (25-85)||(19358411-19358470)
chr5 (25-85)||(36241415-36241475)
chr5 (26-111)||(43353164-43353251)
[»] chr1 (47 HSPs)
chr1 (27-109)||(3263758-3263841)
chr1 (25-107)||(33641219-33641301)
chr1 (25-107)||(40433592-40433674)
chr1 (25-107)||(43122161-43122243)
chr1 (25-110)||(38799199-38799284)
chr1 (25-112)||(11755262-11755350)
chr1 (25-109)||(51834967-51835051)
chr1 (25-107)||(33375211-33375294)
chr1 (25-105)||(16095945-16096025)
chr1 (25-109)||(25661191-25661275)
chr1 (25-85)||(39328106-39328166)
chr1 (26-85)||(9573815-9573874)
chr1 (25-109)||(36166567-36166653)
chr1 (25-109)||(41902745-41902831)
chr1 (25-107)||(17367321-17367403)
chr1 (25-107)||(33931995-33932077)
chr1 (25-109)||(1323445-1323529)
chr1 (25-85)||(37824971-37825031)
chr1 (25-104)||(45102796-45102875)
chr1 (25-110)||(11582089-11582175)
chr1 (25-107)||(17247992-17248074)
chr1 (27-85)||(51039026-51039084)
chr1 (25-106)||(39730123-39730204)
chr1 (25-81)||(17584535-17584591)
chr1 (25-85)||(33825556-33825616)
chr1 (25-85)||(33878628-33878688)
chr1 (29-85)||(33896596-33896652)
chr1 (25-111)||(31222482-31222570)
chr1 (26-109)||(39880053-39880135)
chr1 (25-85)||(7830574-7830634)
chr1 (25-81)||(24474475-24474531)
chr1 (25-85)||(34077398-34077458)
chr1 (26-113)||(23647234-23647321)
chr1 (31-109)||(45588155-45588233)
chr1 (25-85)||(44825216-44825276)
chr1 (26-85)||(29843879-29843938)
chr1 (26-109)||(52307023-52307106)
chr1 (25-107)||(8946943-8947025)
chr1 (26-68)||(10697888-10697930)
chr1 (26-68)||(19401038-19401080)
chr1 (25-67)||(34651393-34651435)
chr1 (25-83)||(49570304-49570362)
chr1 (26-68)||(52306374-52306416)
chr1 (25-105)||(21966943-21967024)
chr1 (26-83)||(42679406-42679463)
chr1 (25-85)||(43120082-43120142)
chr1 (25-81)||(43123336-43123392)
[»] scaffold0166 (1 HSPs)
scaffold0166 (25-107)||(465-547)
[»] scaffold0710 (1 HSPs)
scaffold0710 (25-109)||(98-182)
[»] scaffold0037 (1 HSPs)
scaffold0037 (25-107)||(5527-5609)
[»] scaffold0003 (1 HSPs)
scaffold0003 (28-112)||(227712-227796)
[»] scaffold0024 (2 HSPs)
scaffold0024 (25-107)||(91771-91853)
scaffold0024 (26-85)||(111430-111489)
[»] scaffold0020 (1 HSPs)
scaffold0020 (25-85)||(123722-123782)
[»] scaffold0178 (1 HSPs)
scaffold0178 (25-83)||(8351-8409)
[»] scaffold0005 (1 HSPs)
scaffold0005 (25-107)||(177773-177855)
[»] scaffold0481 (1 HSPs)
scaffold0481 (25-82)||(4286-4343)
[»] scaffold0684 (1 HSPs)
scaffold0684 (25-81)||(1935-1991)
[»] scaffold0198 (1 HSPs)
scaffold0198 (25-81)||(18024-18080)
[»] scaffold1793 (1 HSPs)
scaffold1793 (25-68)||(1240-1283)
[»] scaffold0032 (1 HSPs)
scaffold0032 (26-85)||(30873-30932)
[»] scaffold0002 (1 HSPs)
scaffold0002 (25-112)||(140638-140725)
[»] scaffold0027 (1 HSPs)
scaffold0027 (27-84)||(138896-138953)
[»] scaffold0016 (1 HSPs)
scaffold0016 (26-111)||(95042-95127)
[»] scaffold0045 (1 HSPs)
scaffold0045 (26-78)||(18612-18664)


Alignment Details
Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 28114652 - 28114530
Alignment:
Q  213 tccatcttagtttcaacaaaataaaaatggcaacaagaaccaaagtttgtatttctttgatgttatttgcagtggcatttatcaatgcaatagatgaatg 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  28114652 tccatcttagtttcaacaaaataaaaatggcaacaagaaccaaagtttgtatttctctaatgttatttgcagtggcatttatcaatgcaatagatgaatg 28114553  T
Q  313 ttcagattttacaatcaatgaat 335  Q
    |||||||||||||||||||||||    
T  28114552 ttcagattttacaatcaatgaat 28114530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 28130168 - 28130071
Alignment:
Q  239 atggcaacaagaaccaaagtttgtatttctttgatgttatttgcagtggcatttatcaatgcaatagatgaatgttcagattttacaatcaatgaatc 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28130168 atggcaacaagaaccaaagtttgtatttctttgatgttatttgcagtggcatttatcaatgcaatagatgaatgttcagattttacaatcgatgaatc 28130071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 10139266 - 10139348
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||| || || |||||||||||||||    
T  10139266 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaagccgggccaaacggtacct 10139348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 11199531 - 11199445
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa-ccaggccaaacggtaccttaa 110  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||| || | ||||||||||||||||    
T  11199531 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctgaaaaaaaagccggaccaaacggtaccttaa 11199445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 17622918 - 17622836
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||| ||||||| || ||||||||||||||||||    
T  17622918 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaaactgaaaaaaagccaggccaaacggtacct 17622836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 11968067 - 11968152
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaa 110  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||| ||  |||| |||||||||||||||    
T  11968067 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaattcaggtcaaacggtaccttaa 11968152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 36191112 - 36191200
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaatat 113  Q
    ||||||||||||||||||||| | |||||| |||||||||||||||||||||| ||||||| || || | |||||||||||| ||||||    
T  36191112 ggtactttattgatattgtgtctggcctaacttctccttaaaaacttagaaaaactgaaaaaaagccggaccaaacggtaccataatat 36191200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 53273319 - 53273236
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctt 108  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||| || ||  |||||||||||||||    
T  53273319 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaacccgagccaaacggtacctt 53273236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 13892386 - 13892468
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||| || || |||||||| ||||||    
T  13892386 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaagccgggccaaacagtacct 13892468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 45020225 - 45020307
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  ||||| |||||||||||||||||||||||| || |  |||||||||||||||    
T  45020225 ggtactttattgatattgtgtttggcctagcttctctttaaaaacttagaaaagctgaaaaaaagctgggccaaacggtacct 45020307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 1165269 - 1165184
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagct-gaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||| ||||| ||| | || ||||||||||||||    
T  1165269 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctggaaaaaaaatcgggtcaaacggtacctta 1165184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 27289862 - 27289950
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa--ccaggccaaacggtaccttaat 111  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| |||  || | |||||||||||| ||||    
T  27289862 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctgaaaaaaaaagccggaccaaacggtaccataat 27289950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 51152709 - 51152625
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa--ccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||| |||  || |||||||||||||||    
T  51152709 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaagctgaaaaaaaaagccgggccaaacggtacct 51152625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 17549022 - 17549101
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagct-gaaaacaaaccaggccaaacggt 103  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| |||||||||| ||||| || ||||||||||||||    
T  17549022 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctggaaaaaaagccaggccaaacggt 17549101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 158
Target Start/End: Complemental strand, 28114737 - 28114686
Alignment:
Q  107 ttaatatattttatccacccaagaaattgacccgaattcaagttactaatat 158  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28114737 ttaatatattttatccacccaagaagttgacccgaattcaagttactaatat 28114686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 40949635 - 40949552
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa-ccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||| ||||||| ||| || |||||||||||||||    
T  40949635 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaaactgaaaaaaaagccgggccaaacggtacct 40949552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 7364479 - 7364393
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagct-gaaaacaaaccaggccaaacggtaccttaa 110  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| |||||||||| ||||| || |  ||||||||||||||||||    
T  7364479 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctggaaaaaaagcggggccaaacggtaccttaa 7364393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 2414294 - 2414382
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg--aaaacaaaccaggccaaacggtaccttaat 111  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  |||||||||||  |||| ||  | |||||||||||||||||||    
T  2414294 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaagctggaaaaaaaagtccggccaaacggtaccttaat 2414382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 34662872 - 34662816
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  34662872 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctg 34662816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 6940969 - 6941028
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||||||||||||||||||||| |||||  |||||||||||||| |||||||||||||||    
T  6940969 gtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaa 6941028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 8150362 - 8150304
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaa 83  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  |||||||||||||    
T  8150362 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaagctgaa 8150304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 14639519 - 14639437
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||| || || | ||||||| |||||    
T  14639519 ggtactttattgatattgtgtttggcctaacttcttcttaaaaacgtagaaaagttgaaaaaaagccggaccaaacgatacct 14639437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 28118537 - 28118622
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg-aaaacaaaccaggccaaacggtaccttaat 111  Q
    ||||||||||||||||||||| |||||  |||||||||||||| ||||||| ||| |||| |||||  | ||||||||||||||||    
T  28118537 tactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaaactgaaaaaaaaaccgaggcaaacggtaccttaat 28118622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 46047074 - 46047158
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg--aaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  |||||||||||  |||| ||||| || |||||| |||||    
T  46047074 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaagctggaaaaaaaaaccgggtcaaacgatacct 46047158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 41145418 - 41145478
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  |||| ||||||||||    
T  41145418 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagagaagctgaaaa 41145478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 55210126 - 55210186
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||| |||||||||||||||||| |||||| |||| ||||||||| |||||||||||||||    
T  55210126 ggtattttattgatattgtgtttggcctaacttcttcttaaaaacgtagaaaagctgaaaa 55210186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 18137478 - 18137387
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaatatatt 116  Q
    |||||||||||||||||||||||  ||||  |||||||||||||  |||| |||||||||| || ||   ||||||||||||| ||||||||    
T  18137478 ggtactttattgatattgtgtttgacctaccttctccttaaaaatatagagaagctgaaaaaaagccgaaccaaacggtacctaaatatatt 18137387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 49124686 - 49124595
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaatatatt 116  Q
    |||||||||||||||||||||||  ||||  |||||||||||||  |||| |||||||||| || ||   ||||||||||||| ||||||||    
T  49124686 ggtactttattgatattgtgtttgacctaccttctccttaaaaatatagagaagctgaaaaaaagccgaaccaaacggtacctaaatatatt 49124595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 7401206 - 7401260
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    |||||||||||||||||||||  ||||| |||||||||||||| |||||||||||    
T  7401206 tactttattgatattgtgtttgacctaacttctccttaaaaacgtagaaaagctg 7401260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 40848929 - 40848871
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||| |||||| |||||||||||||  |||||||| ||||||    
T  40848929 tactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaagttgaaaa 40848871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 49908973 - 49908891
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| || ||  |||||||||||||  |||| |||||||||| ||  | |||||||||||||||    
T  49908973 ggtactttattgatattgtgtttggcttagcttctccttaaaaatatagagaagctgaaaagaagtcgggccaaacggtacct 49908891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 10582829 - 10582889
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| |||||  |||||||||||||  |||| ||||||||||    
T  10582829 ggtactttattgatattgtgtttggcctagcttctccttaaaaatgtagagaagctgaaaa 10582889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 18003334 - 18003386
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaa 77  Q
    ||||||||||||||||||| |||||||||| |||||||||||||  |||||||    
T  18003334 ggtactttattgatattgtatttagcctaacttctccttaaaaatgtagaaaa 18003386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 32201830 - 32201890
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  |||| ||||| ||||    
T  32201830 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagagaagctaaaaa 32201890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 55990843 - 55990787
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    |||||||||||||||||||||||  ||||  |||||||||||||| |||||||||||    
T  55990843 ggtactttattgatattgtgtttgacctagcttctccttaaaaacgtagaaaagctg 55990787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 7404195 - 7404238
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    ||||||||||||||||||||||| |||||| |||||||||||||    
T  7404195 ggtactttattgatattgtgtttggcctaacttctccttaaaaa 7404238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 13859487 - 13859444
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    ||||||||||||||||||||||| |||||| |||||||||||||    
T  13859487 ggtactttattgatattgtgtttggcctaacttctccttaaaaa 13859444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 22556382 - 22556339
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  22556382 ggtactttattgatattgtggttagcctaacttctccttaaaaa 22556339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 33505226 - 33505311
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    |||||| |||||||||||  || |||||| |||||||||||||  |||||||| | |||| ||||| || ||||||||| ||||||    
T  33505226 gtacttaattgatattgtacttggcctaacttctccttaaaaatatagaaaagttaaaaaaaaaccgggacaaacggtatcttaat 33505311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 43116657 - 43116604
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaag 78  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||  ||||||||    
T  43116657 ggtactttattgatattgtgtttggcctaacttctacttaaaaatgtagaaaag 43116604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 5752764 - 5752716
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttaga 74  Q
    |||||| ||||||||||||||| |||||| ||||||||||||| |||||    
T  5752764 gtacttaattgatattgtgtttggcctaacttctccttaaaaatttaga 5752716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 39656874 - 39656818
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    ||||||||||||||||||||||| |||||  |||| ||||||||  |||||||||||    
T  39656874 ggtactttattgatattgtgtttggcctagcttcttcttaaaaatgtagaaaagctg 39656818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 51186824 - 51186764
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||| ||||||||||| |||||  |||||||||||||  |||| ||||||||||    
T  51186824 ggtactttattcatattgtgtttggcctagcttctccttaaaaatgtagagaagctgaaaa 51186764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 347506 - 347549
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||||||||||||||||||||  ||||| |||||||||||||    
T  347506 ggtactttattgatattgtgtttgacctaacttctccttaaaaa 347549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 35715305 - 35715364
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||||| ||||||||||| ||| |||||| |||||||||||||  |||||||| ||||||    
T  35715305 gtacttaattgatattgtatttggcctaacttctccttaaaaatgtagaaaagttgaaaa 35715364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 37874507 - 37874550
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    ||||||||| ||||||||||||| |||||| |||||||||||||    
T  37874507 ggtactttactgatattgtgtttggcctaacttctccttaaaaa 37874550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 17730780 - 17730738
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  17730780 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 17730738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 23627429 - 23627344
Alignment:
Q  25 ggtactttattgatattgtg-tttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa--ccaggccaaacggtacct 107  Q
    |||||||||||||||||||| ||| || ||| |||||||||||||  |||| |||||||||| |||   | |||||||||||||||    
T  23627429 ggtactttattgatattgtgttttggcttaacttctccttaaaaatgtagagaagctgaaaaaaaaagtcgggccaaacggtacct 23627344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 33505925 - 33506003
Alignment:
Q  33 attgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    ||||||||||||||| |||||| |||||||||||||  |||| ||| |||||| || || |  |||| |||||||||||    
T  33505925 attgatattgtgtttggcctaacttctccttaaaaatgtagagaagttgaaaaaaagccggatcaaatggtaccttaat 33506003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 35716036 - 35716078
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  35716036 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 35716078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 47559424 - 47559466
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||    
T  47559424 gtacttaattgatattgtgtttggcctaatttttccttaaaaa 47559466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 577596 - 577653
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaa 83  Q
    |||||| ||||||||||| ||| |||||| |||||||||||||  |||||||| ||||    
T  577596 gtacttaattgatattgtatttggcctaacttctccttaaaaatgtagaaaagttgaa 577653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 7646563 - 7646648
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    |||||| |||||||||||  || || |||||||||||||||||  |||| ||| |||||| || || || ||||||||| ||||||    
T  7646563 gtacttaattgatattgtacttggcataatttctccttaaaaatgtagagaagttgaaaaaaatccgggtcaaacggtatcttaat 7646648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 26108958 - 26108909
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttaga 74  Q
    ||||||||||||||||||||||| | |||  |||||||||||||| ||||    
T  26108958 ggtactttattgatattgtgtttggtctagcttctccttaaaaacgtaga 26108909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 29347404 - 29347489
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    |||||| |||||||| |||||| |||||| |||||||||||||  |||| ||| |||||| ||| |    ||||||||||||||||    
T  29347404 gtacttaattgatatcgtgtttggcctaacttctccttaaaaatgtagagaagttgaaaaaaaatcgattcaaacggtaccttaat 29347489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 35833174 - 35833259
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    |||||| ||||||||||||||| |||||| ||||||| ||||| ||||| ||  |||||| || |  || |||| |||||||||||    
T  35833174 gtacttaattgatattgtgtttggcctaacttctcctgaaaaatttagagaaattgaaaaaaagctgggtcaaatggtaccttaat 35833259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 24305280 - 24305366
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa---ccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||  ||||  || ||||||||||  |||| |||||||||| |||   || | |||||||||||||||    
T  24305280 gtactttattgatattgtgtttgtcctatcttttccttaaaaatgtagagaagctgaaaaaaaaaagccggaccaaacggtacctta 24305366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 24631607 - 24631667
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| | |||| |||| ||||||||   ||| ||||||||||    
T  24631607 ggtactttattgatattgtgtttggtctaacttcttcttaaaaatgaagagaagctgaaaa 24631667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 26098576 - 26098616
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaa 67  Q
    ||||||||||||||||||||| | |||| ||||||||||||    
T  26098576 tactttattgatattgtgtttggtctaacttctccttaaaa 26098616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 35710995 - 35711047
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaag 78  Q
    |||||| ||||||||||| ||| |||||| |||||||||||||  ||||||||    
T  35710995 gtacttaattgatattgtatttggcctaacttctccttaaaaatgtagaaaag 35711047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 55187189 - 55187145
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaac 69  Q
    ||||||||||||||||||||||| || ||  ||||||||||||||    
T  55187189 ggtactttattgatattgtgtttggcatagcttctccttaaaaac 55187145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 54740834 - 54740750
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  54740834 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctgaaaaaaaaccgggccaaacggtacctta 54740750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 53021682 - 53021603
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggta 104  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| || || ||||||||||||    
T  53021682 ggtactttattgatattgtgtttggcctaacttctccttaaaaacttagaaaagctgaaaaaaagccgggccaaacggta 53021603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 4017613 - 4017530
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa-ccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||| || |||||||||||||||    
T  4017613 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctgaaaaaaaagccgggccaaacggtacct 4017530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 111
Target Start/End: Complemental strand, 2908138 - 2908052
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||| ||  | |||||||||||||||||||    
T  2908138 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaagtcgggccaaacggtaccttaat 2908052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 46756587 - 46756505
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||  ||||||||||| |||||    
T  46756587 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctgaaaaaaagtcaggccaaacgatacct 46756505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 7264125 - 7264043
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  |||| ||||||||| ||||||||||||||| || || |||||||||||||||    
T  7264125 ggtactttattgatattgtgtttggcctatcttcttcttaaaaacgtagaaaagctgaaaaaaagccgggccaaacggtacct 7264043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 14588773 - 14588855
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||  | || | |||||||||||||    
T  14588773 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctgaaaaatagccggaccaaacggtacct 14588855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 20997267 - 20997349
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||| ||| | || ||||||||||||    
T  20997267 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaagctgaaaaaaaatcggggcaaacggtacct 20997349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 45600321 - 45600403
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||| || |  || ||||||||||||    
T  45600321 ggtactttattgatattgtgtttggcctagcttctccttaaaaacttagaaaagctgaaaaaaagctgggtcaaacggtacct 45600403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 22348129 - 22348214
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaa 110  Q
    |||| |||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||| ||  |||||||||| |||||||||    
T  22348129 ggtattttattgatattgtatttggcctaacttctccttaaaaacgtagaaaagctgaaaaaaagtcaggccaaacagtaccttaa 22348214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 29499020 - 29498935
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagct-gaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| ||||| ||||| |  ||||||||||||||    
T  29499020 ggtactttattgatattgtgtttggcctagtttctccttaaaaacgtagaaaagctggaaaaaaaaccggatcaaacggtacctta 29498935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 42189146 - 42189231
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaa 110  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||| |||||| ||| || || | ||||||||||||||||    
T  42189146 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagagaagctggaaaaaagccggaccaaacggtaccttaa 42189231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 36593235 - 36593319
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    |||||||||||||||||||||||  |||| ||||||||||||||  ||||||||||||||| ||  |||| ||||||||||||||    
T  36593235 ggtactttattgatattgtgtttgtcctagtttctccttaaaaatgtagaaaagctgaaaaaaagtcaggtcaaacggtacctta 36593319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 26880671 - 26880588
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa-ccaggccaaacggtacct 107  Q
    |||| ||||||||||||||||||  ||||| |||||||||||||| || |||||||||||| ||| ||||||||||||||||||    
T  26880671 ggtattttattgatattgtgtttgacctaacttctccttaaaaacgtaaaaaagctgaaaaaaaatccaggccaaacggtacct 26880588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 52459510 - 52459427
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagct-gaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||    
T  52459510 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctggaaaaaaaaccgggtcaaacggtacct 52459427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 33933838 - 33933923
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa---ccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |  |||||||||||| |||   ||||||||||||||||||||    
T  33933838 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgt--aaaagctgaaaaaaaaaagccaggccaaacggtacctta 33933923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 35530739 - 35530821
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| | |||| |||||||||||||  |||| |||||||||| || || |||||||||||||||    
T  35530739 ggtactttattgatattgtgtttggtctaacttctccttaaaaatatagagaagctgaaaaaaagccgggccaaacggtacct 35530821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 48543805 - 48543723
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| || |||| ||||||| || || |||||||||||||||    
T  48543805 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtaaaaaaactgaaaaaaagccgggccaaacggtacct 48543723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 7039577 - 7039500
Alignment:
Q  30 tttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    |||||||||||||||||| || ||  |||||||||||||| ||||||||||||||| ||||| || ||||||||||||    
T  7039577 tttattgatattgtgtttggcgtagcttctccttaaaaacgtagaaaagctgaaaaaaaaccgggtcaaacggtacct 7039500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 115
Target Start/End: Original strand, 20859585 - 20859677
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg--aaaacaaaccaggccaaacggtaccttaatatat 115  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  |||| ||||||  |||| ||||| | |||||||||||||||| ||||    
T  20859585 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagagaagctgaaaaaaaaaaccggaccaaacggtaccttaacatat 20859677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 54196913 - 54196998
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaa 110  Q
    |||| |||||| ||||||||||| |||||| |||||||||||||  |||| |||||||||| ||| | ||||||||||||||||||    
T  54196913 ggtattttattcatattgtgtttggcctaacttctccttaaaaatgtagagaagctgaaaaaaaatccggccaaacggtaccttaa 54196998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 13336285 - 13336201
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    |||||||||||||||||||||||  ||||  |||||||||||||  |||| |||||||||| || || |||||||||||||||||    
T  13336285 ggtactttattgatattgtgtttgacctagcttctccttaaaaatgtagagaagctgaaaaaaagccgggccaaacggtacctta 13336201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 47671394 - 47671482
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaatat 113  Q
    ||||||||||||||||||||||| |||||| ||||| |||||||  || |||||||||||| ||  | ||||||||||||||| |||||    
T  47671394 ggtactttattgatattgtgtttggcctaacttctctttaaaaatgtacaaaagctgaaaaaaagtcgggccaaacggtacctgaatat 47671482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 54511431 - 54511487
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  54511431 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctg 54511487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 35907714 - 35907796
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    |||||||||||||||||||||||  ||||| |||||||||||||  |||| |||||||||| ||| | ||||||| |||||||    
T  35907714 ggtactttattgatattgtgtttgacctaacttctccttaaaaatgtagagaagctgaaaaaaaatcgggccaaatggtacct 35907796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 44223496 - 44223414
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||| |||| |||||||||||||| |||||| ||| ||    |||||||||||||||    
T  44223496 ggtactttattgatattgtgtttggcctaacttcttcttaaaaacttagagaagctggaaaaaagttgggccaaacggtacct 44223414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 52673174 - 52673092
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    |||||||||||||||||||||||  ||||  |||||||||||||| |||||||||| |||| || || || ||||||||||||    
T  52673174 ggtactttattgatattgtgtttgacctagcttctccttaaaaacgtagaaaagctaaaaaaaagccgggtcaaacggtacct 52673092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 29449349 - 29449264
Alignment:
Q  25 ggtactttattgatat--tgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa-ccaggccaaacggtacct 107  Q
    ||||||||||||||||  ||||||| |||||  |||||||||||||  ||||||||||||||| ||| || |||||||||||||||    
T  29449349 ggtactttattgatatagtgtgtttggcctagcttctccttaaaaatgtagaaaagctgaaaaaaaagccgggccaaacggtacct 29449264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 30270465 - 30270546
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacc 106  Q
    |||||||||||||||||||||||  ||||  |||||||||||||  ||||||||||||||| ||  | || |||||||||||    
T  30270465 ggtactttattgatattgtgtttgacctagcttctccttaaaaatgtagaaaagctgaaaaaaagtcgggtcaaacggtacc 30270546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 47718668 - 47718587
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||| |||||| |||||  |||||||||||||  |||||||||| |||| || || | |||||||||||||    
T  47718668 gtactttattgatatggtgtttggcctagcttctccttaaaaatgtagaaaagctcaaaaaaagccggaccaaacggtacct 47718587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 19535728 - 19535668
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||| ||||||||||||| |||||| |||||||||||||  |||||||| ||||||    
T  19535728 ggtactttagtgatattgtgtttggcctaacttctccttaaaaatgtagaaaagttgaaaa 19535668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 38360862 - 38360774
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa-ccaggccaaacggtaccttaatata 114  Q
    ||||||||||||||||||||| |||||  |||| ||| ||||  ||||||||||||||| |||  |||| ||||||||||| |||||||    
T  38360862 tactttattgatattgtgtttggcctagcttctactttaaaatgtagaaaagctgaaaaaaaagtcaggtcaaacggtaccataatata 38360774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 39720413 - 39720357
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||  |||||||||||    
T  39720413 ggtactttattgatattgtctttggcctaacttctccttaaaaatgtagaaaagctg 39720357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 46851890 - 46851950
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||| | |||||| |||||||||||||  |||| ||||||||||    
T  46851890 ggtactttattgatattgtgtgtggcctaacttctccttaaaaatatagagaagctgaaaa 46851950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 50931872 - 50931792
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtac 105  Q
    |||||||||||||||||||||||  ||||| |||||||||||||| || | ||| || ||| || || |||||||||||||    
T  50931872 ggtactttattgatattgtgtttgacctaacttctccttaaaaacgtaaagaaggtggaaaaaagccgggccaaacggtac 50931792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 12102408 - 12102491
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctt 108  Q
    ||||||||||||||||||||||| |||||  ||||||||||||   |||| |||||||||| || |  || |||||||||||||    
T  12102408 ggtactttattgatattgtgtttggcctagcttctccttaaaattgtagagaagctgaaaaaaagctgggtcaaacggtacctt 12102491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 874526 - 874476
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaa 77  Q
    ||||||||||||||||||||| |||||  |||||||||||||| |||||||    
T  874526 tactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaa 874476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 13448868 - 13448779
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa--ccaggccaaacggtaccttaata 112  Q
    |||||||||| ||||||||||||  ||||  |||||||||||||| ||||||| || |||| |||   |||| |||||||||||||||||    
T  13448868 ggtactttatggatattgtgtttgacctagcttctccttaaaaacgtagaaaaactaaaaaaaaaagtcaggtcaaacggtaccttaata 13448779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 54112475 - 54112433
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||||||||||||||||||| |||||| |||||||||||||    
T  54112475 gtactttattgatattgtgtttcgcctaacttctccttaaaaa 54112433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 48960288 - 48960201
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg---aaaacaaaccaggccaaacggtacctta 109  Q
    |||||||||||||||||| ||||  ||||| |||| ||||||||  |||| ||||||   |||| |||||||| ||||||||||||||    
T  48960288 ggtactttattgatattgagtttgacctaacttctgcttaaaaatgtagagaagctgaaaaaaaaaaaccaggtcaaacggtacctta 48960201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 33873253 - 33873177
Alignment:
Q  33 attgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||| ||| |||||| |||||||||||||  |||| ||| |||||| ||||| || ||||||||| ||||    
T  33873253 attgatattgtatttggcctaacttctccttaaaaatgtagagaagttgaaaaaaaaccgggtcaaacggtatctta 33873177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 43317774 - 43317830
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    |||| |||||||||||||||||| |||||| |||||||||||||  |||| ||||||    
T  43317774 ggtattttattgatattgtgtttggcctaacttctccttaaaaatatagagaagctg 43317830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 46089930 - 46090006
Alignment:
Q  28 actttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggta 104  Q
    |||||||||||||||||||| ||| |  |||||||||||||  |||| |||||||||| ||| |  |||||||||||    
T  46089930 actttattgatattgtgtttggcccagcttctccttaaaaatgtagagaagctgaaaaaaaatcgagccaaacggta 46090006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 13166263 - 13166350
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaata 112  Q
    |||||||||||||||||||||||  ||||| |||||||| ||||  |||| ||| |||||| ||  | || |||||||||||| ||||    
T  13166263 ggtactttattgatattgtgtttgtcctaacttctccttgaaaatgtagagaagttgaaaaaaagtcggggcaaacggtacctaaata 13166350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 26039731 - 26039790
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||||| |||||||||| |||| |||||| |||||||||||||| |||| ||| ||||||    
T  26039731 gtacttaattgatattgcgtttggcctaacttctccttaaaaacgtagagaagttgaaaa 26039790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 8393879 - 8393837
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  8393879 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 8393837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 11601905 - 11601947
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  11601905 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 11601947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 19895389 - 19895431
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  19895389 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 19895431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 22474729 - 22474644
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg--aaaacaaaccaggccaaacggtacctta 109  Q
    |||||| ||||||||||| ||| |||||| |||||||||||||  |||||||| ||  |||| ||||| || ||||||||| ||||    
T  22474729 gtacttaattgatattgtatttggcctaacttctccttaaaaatgtagaaaagttggaaaaaaaaaccgggtcaaacggtatctta 22474644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 28981553 - 28981595
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  28981553 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 28981595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 40831665 - 40831707
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  40831665 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 40831707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 111
Target Start/End: Complemental strand, 5238283 - 5238198
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    |||||| ||||||||||||||| |||||| || ||||||||||  |||| ||| |||||| || |  || |||||||||| |||||    
T  5238283 gtacttaattgatattgtgtttggcctaacttatccttaaaaatgtagagaagttgaaaaaaagcagggtcaaacggtacattaat 5238198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 21732141 - 21732218
Alignment:
Q  34 ttgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    |||||||||| ||| |||||| |||||||||||||  |||| ||| |||||| || || || ||||||||| ||||||    
T  21732141 ttgatattgtatttggcctaacttctccttaaaaatgtagagaagttgaaaaaaacccgggtcaaacggtatcttaat 21732218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 34435010 - 34435070
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||| |||||||||||| |||| || ||| |||||||||||||  |||| ||||||||||    
T  34435010 ggtacattattgatattgcgtttggcttaacttctccttaaaaatgtagagaagctgaaaa 34435070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 46091048 - 46091108
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||| ||||||||||||||||||  ||||  |||||||||||||  |||| ||||||||||    
T  46091048 ggtattttattgatattgtgtttgacctagcttctccttaaaaatgtagagaagctgaaaa 46091108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 48522303 - 48522355
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaag 78  Q
    |||||| ||||||||||||||| |||||| |||| ||||||||  ||||||||    
T  48522303 gtacttaattgatattgtgtttggcctaacttcttcttaaaaatgtagaaaag 48522355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 12907034 - 12906945
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaatata 114  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||| || || ||||||||||||||||| ||||    
T  12907034 ggtactttattgatattgtgtttggcctagcttctccttaaaaacttagaaaagctgaaaaaaagccgggccaaacggtaccttagtata 12906945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 17276839 - 17276760
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacc 106  Q
    ||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||| || || ||||||||||||||    
T  17276839 tactttattgatattgtgtttggcctagcttctccttaaaaacttagaaaagctgaaaaaaagccgggccaaacggtacc 17276760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 29450104 - 29450186
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||| || || |||||||||||||||    
T  29450104 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaagccgggccaaacggtacct 29450186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 32961884 - 32961966
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||| ||  |||||||||||||||||    
T  32961884 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaagacaggccaaacggtacct 32961966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 41425657 - 41425573
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg--aaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||  |||| ||||| |||||||||||||||    
T  41425657 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctggaaaaaaaaaccgggccaaacggtacct 41425573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 40241296 - 40241383
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa--ccaggccaaacggtaccttaa 110  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| |||  || ||| ||||||||||||||    
T  40241296 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctgaaaaaaaaagccgggctaaacggtaccttaa 40241383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 40788226 - 40788142
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| || |||||||||||| || || |||||||||||||||||    
T  40788226 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtaaaaaagctgaaaaaaagccgggccaaacggtacctta 40788142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 10998128 - 10998047
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagct-gaaaacaaaccaggccaaacggtac 105  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||| || ||  ||||||||||||    
T  10998128 ggtactttattgatattgtgtttggcctaacttctccttaaaaacttagaaaagctagaaaaaaagccgcgccaaacggtac 10998047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 43154888 - 43154803
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg-aaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||| ||| |||| ||||| | |||||||||||||||    
T  43154888 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaaactgaaaaaaaaaccggaccaaacggtacctta 43154803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 23640477 - 23640560
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagct-gaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| |||||||||| ||||| ||  |||||||||||||||||    
T  23640477 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctggaaaaaaagtcaggccaaacggtacct 23640560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 38044155 - 38044068
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaata 112  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||| |||||||| |||||| || || | ||||||||||| ||||||    
T  38044155 ggtactttattgatattgtatttggcctaacttctccttaaaaacgtagaaaagttgaaaaaaagccggaccaaacggtactttaata 38044068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 45619332 - 45619251
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacc 106  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||| ||  | ||| ||||||||||    
T  45619332 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaagtcgggctaaacggtacc 45619251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 18957651 - 18957735
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||| ||||||||| |||||  |||||||||||||| ||||||||||||||| ||  | |||||||| ||||||||    
T  18957651 ggtactttattgaaattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaagtcgggccaaaccgtacctta 18957735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 4493281 - 4493370
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa---ccaggccaaacggtaccttaat 111  Q
    ||||||||||||||||||||||| |||||  |||||||||||||  ||||||||||||||| |||   || ||||||||||| |||||||    
T  4493281 ggtactttattgatattgtgtttggcctatcttctccttaaaaatgtagaaaagctgaaaaaaaaaatccgggccaaacggtgccttaat 4493370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 4407631 - 4407713
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    |||||||||||||||||||||||  ||||| |||||||||||||  |||| |||||||||| ||  | |||||||||||||||    
T  4407631 ggtactttattgatattgtgtttgacctaacttctccttaaaaatgtagagaagctgaaaaaaagtcgggccaaacggtacct 4407713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 8791124 - 8791042
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||| ||||| |||||| || ||||||||||| ||||||||||||||| || || || ||||| ||||||||    
T  8791124 tactttattgatattatgtttggcctaacttttccttaaaaacgtagaaaagctgaaaaaaagccgggtcaaactgtacctta 8791042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 37670653 - 37670739
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    ||||||||||||||||||||||| | |||  ||||||||||||   ||||||||||||||| ||  | |||||||||||||||||||    
T  37670653 ggtactttattgatattgtgtttggtctagcttctccttaaaattgtagaaaagctgaaaaaaagtcgggccaaacggtaccttaat 37670739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 4410655 - 4410715
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||  |||||||||||||||    
T  4410655 ggtactttattaatattgtgtttggcctaacttctccttaaaaatgtagaaaagctgaaaa 4410715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 27032192 - 27032276
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    |||||||||||||||||||||||  | ||| ||||| |||||||| ||||||| ||||||| ||  | |||||||||||||||||    
T  27032192 ggtactttattgatattgtgtttgacttaacttctctttaaaaacgtagaaaaactgaaaaaaagtcgggccaaacggtacctta 27032276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 43110270 - 43110188
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg--aaaacaaaccaggccaaacggtac 105  Q
    ||||||||||||||||||||||| |||||| |||| |||||||   |||||||||||  |||| ||||| |||||||||||||    
T  43110270 ggtactttattgatattgtgtttggcctaacttcttcttaaaattgtagaaaagctggaaaaaaaaaccgggccaaacggtac 43110188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 44652800 - 44652883
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa-ccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| | |||| ||||||||||||   |||| |||||||||| ||| | ||||||||||||||||    
T  44652800 ggtactttattgatattgtgtttggtctaacttctccttaaaattgtagagaagctgaaaaaaaagctaggccaaacggtacct 44652883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 47168468 - 47168555
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaatat 113  Q
    |||||| ||||| ||||||||| |||||| |||||||||||||  |||| ||| |||||| ||||| || |||||| |||||||||||    
T  47168468 gtacttaattgaaattgtgtttggcctaacttctccttaaaaatgtagagaagttgaaaaaaaaccgggtcaaacgataccttaatat 47168555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 5525255 - 5525197
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaa 83  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  |||| ||||||||    
T  5525255 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagagaagctgaa 5525197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 23153801 - 23153712
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg--aaaacaaaccaggccaaacggtaccttaata 112  Q
    ||||||||||||||||||||||| |||||  |||||||||||||  |||||||| ||  |||| ||||| || ||||| |||||||||||    
T  23153801 ggtactttattgatattgtgtttggcctagcttctccttaaaaatgtagaaaagttgaaaaaaaaaaccgggtcaaacagtaccttaata 23153712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 40036952 - 40037037
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg-aaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||  || ||||| || |||| |||||||  ||||||||||||||    
T  40036952 ggtactttattgatattgtgtttggcctaacttcttcttaaaaatgtaaaaaagttgaaaaaaaaaccagatcaaacggtacctta 40037037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 42830207 - 42830292
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    |||||| ||||||||||| ||| |||||| |||||||||||||  |||| ||| |||||| || ||||| ||||||||| ||||||    
T  42830207 gtacttaattgatattgtatttggcctaacttctccttaaaaatgtagagaagttgaaaaaaacccaggtcaaacggtatcttaat 42830292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 4409336 - 4409396
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||| |||||||||||||||||| | |||| |||||||||||||| |||| ||||||||||    
T  4409336 ggtattttattgatattgtgtttggtctaacttctccttaaaaacgtagagaagctgaaaa 4409396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 5482598 - 5482538
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| |||||  |||| ||||||||  |||||||||||||||    
T  5482598 ggtactttattgatattgtgtttggcctagcttcttcttaaaaatgtagaaaagctgaaaa 5482538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 6605753 - 6605669
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||| ||||||||||| |||||  |||||||||||||| |||| || ||| ||| || || || ||||||||||||||    
T  6605753 ggtactttattaatattgtgtttggcctagcttctccttaaaaacgtagagaaactggaaaaaagccgggtcaaacggtacctta 6605669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 44550332 - 44550244
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaatat 113  Q
    |||| |||||||||||||||||| ||| |  |||||||||||||  |||| |||||| ||| || || ||||||||||||||| |||||    
T  44550332 ggtattttattgatattgtgtttggcccagcttctccttaaaaatgtagagaagctggaaaaaagccgggccaaacggtacctaaatat 44550244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 4409780 - 4409695
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg---aaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||| | |||  |||||||||||||| |||||||| ||   |||| || || |||||||||||||||||    
T  4409780 tactttattgatattgtgtttggtctagcttctccttaaaaacgtagaaaagatggaaaaaaaaagccgggccaaacggtacctta 4409695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 5484803 - 5484862
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaa 84  Q
    ||||||||||||||||||||||| |||||  |||||||||||||  |||| |||||||||    
T  5484803 ggtactttattgatattgtgtttggcctagcttctccttaaaaatgtagagaagctgaaa 5484862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 22345787 - 22345872
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg--aaaacaaaccaggccaaacggtacctta 109  Q
    |||||||||||||||||||| || |||||  |||||||||||||| |||||||||||  |||| ||  | |||||||||||||||||    
T  22345787 ggtactttattgatattgtg-ttggcctagcttctccttaaaaacgtagaaaagctggaaaaaaaagtcgggccaaacggtacctta 22345872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 37311310 - 37311353
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    ||||||||||||||||||||||| |||||| |||||||||||||    
T  37311310 ggtactttattgatattgtgtttggcctaacttctccttaaaaa 37311353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 36758942 - 36758884
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaa 83  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||||  ||||||| |||||    
T  36758942 ggtactttattaatattgtgtttggcctaatttttccttaaaaatgtagaaaaactgaa 36758884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 36764710 - 36764652
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaa 83  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||||  ||||||| |||||    
T  36764710 ggtactttattaatattgtgtttggcctaatttttccttaaaaatgtagaaaaactgaa 36764652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 41344230 - 41344288
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||||||||||||||||||||  ||||| |||||||||||||  || ||||||||||||    
T  41344230 tactttattgatattgtgtttgacctaacttctccttaaaaatgtaaaaaagctgaaaa 41344288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 21135559 - 21135644
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa-ccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| | |||  ||||| |||||||  |||| |||||||||| |||  | |||||||||||||||||    
T  21135559 ggtactttattgatattgtgtttggtctagcttctctttaaaaatgtagagaagctgaaaaaaaagtcgggccaaacggtacctta 21135644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 3792569 - 3792510
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||||| ||||||||||| ||| |||||| |||||||||||||  |||||||| ||||||    
T  3792569 gtacttaattgatattgtatttggcctaacttctccttaaaaatgtagaaaagttgaaaa 3792510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 11498674 - 11498588
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaatat 113  Q
    |||||| |||||||||||||||  ||||| |||||||||||||  |||| ||| | |||| ||||| || ||||||||| ||||||||    
T  11498674 gtacttaattgatattgtgtttgacctaacttctccttaaaaatgtagagaag-taaaaaaaaacctggtcaaacggtatcttaatat 11498588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 47839873 - 47839822
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaa 77  Q
    |||||||||||||||||||||| |||||  |||||||||||||  |||||||    
T  47839873 gtactttattgatattgtgtttggcctagcttctccttaaaaatgtagaaaa 47839822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 4409664 - 4409598
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaacc 91  Q
    ||||||||||| ||||| |||||  ||||| |||||||||||||  |||| |||||||||| |||||    
T  4409664 ggtactttatttatattatgtttgacctaacttctccttaaaaatgtagagaagctgaaaaaaaacc 4409598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 9144898 - 9144856
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  9144898 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 9144856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 16934364 - 16934441
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtac 105  Q
    ||||||||||||||||||||||| |||||    || ||||||||  |||| |||||||||| || || |||||||||||||    
T  16934364 ggtactttattgatattgtgtttggccta---gcttcttaaaaatgtagagaagctgaaaaaaagccgggccaaacggtac 16934441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 16939747 - 16939824
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtac 105  Q
    ||||||||||||||||||||||| |||||    || ||||||||  |||| |||||||||| || || |||||||||||||    
T  16939747 ggtactttattgatattgtgtttggccta---gcttcttaaaaatgtagagaagctgaaaaaaagccgggccaaacggtac 16939824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 21670600 - 21670642
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  21670600 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 21670642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 27737528 - 27737570
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| |||||||||||||||  |||||||||||||||||||    
T  27737528 gtacttaattgatattgtgtttgacctaatttctccttaaaaa 27737570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 29683853 - 29683895
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  29683853 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 29683895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 39276892 - 39276850
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  39276892 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 39276850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 39650884 - 39650926
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  39650884 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 39650926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 4495219 - 4495256
Alignment:
Q  31 ttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  4495219 ttattgatattgtgtttggcctaacttctccttaaaaa 4495256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 111
Target Start/End: Complemental strand, 17814936 - 17814851
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    |||||| ||| ||||||||||| ||||||||| ||||||||||  |||| ||| |||||| || |  || |||||||||| |||||    
T  17814936 gtacttaattaatattgtgtttggcctaatttatccttaaaaatgtagagaagttgaaaaaaagcagggtcaaacggtacattaat 17814851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 19052049 - 19052134
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    |||||| ||| ||||||||||| ||||||||| ||||||||||  |||| ||| |||||| || |  || |||||||||| |||||    
T  19052049 gtacttaattaatattgtgtttggcctaatttatccttaaaaatgtagagaagttgaaaaaaagcagggtcaaacggtacattaat 19052134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 47138907 - 47138854
Alignment:
Q  30 tttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaa 83  Q
    ||||||||||||||||||  |||||  ||||||||||||  |||||||||||||    
T  47138907 tttattgatattgtgtttgacctaacatctccttaaaaatgtagaaaagctgaa 47138854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 48529697 - 48529738
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    ||||| ||||||||||||||| |||||| |||||||||||||    
T  48529697 tacttaattgatattgtgtttggcctaacttctccttaaaaa 48529738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 29683125 - 29683209
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaa-aacaaaccaggccaaacggtacctta 109  Q
    |||||| ||||||||||| ||| |||||| |||||||||||||  |||| ||| |||| || |||||||| ||||| ||| ||||    
T  29683125 gtacttaattgatattgtatttggcctaacttctccttaaaaatgtagagaagttgaataaaaaaccaggtcaaacagtatctta 29683209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 5165286 - 5165201
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaa 110  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||  | ||||||||||||||||||    
T  5165286 ggtactttattgatattgtgtttggcctaacttctccttaaaaacttagaaaagctgaaaaaaagtcgggccaaacggtaccttaa 5165201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 24927145 - 24927229
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||| ||||| | |||||||||||||||    
T  24927145 ggtactttattgatattgtgtttggcctagcttctccttaaaaacttagaaaagctgaaaaaaaaccggaccaaacggtacctta 24927229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 36581856 - 36581939
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    |||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| || || |||||||||||||||||    
T  36581856 gtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctgaaaaaaagccgggccaaacggtacctta 36581939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 3325653 - 3325735
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| || || |||||||||||||||    
T  3325653 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctgaaaaaaagccgggccaaacggtacct 3325735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 969180 - 969096
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| || || ||||||||| |||||||    
T  969180 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctgaaaaaaagccgggccaaacgatacctta 969096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 21843650 - 21843734
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||| ||  |||||||||||||||||||    
T  21843650 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaagtcaggccaaacggtacctta 21843734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 8876822 - 8876741
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacc 106  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||| || || ||||||||||||||    
T  8876822 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaagccgggccaaacggtacc 8876741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 36579633 - 36579551
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||| ||  | |||||||||||||||    
T  36579633 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaagtcgggccaaacggtacct 36579551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 36087025 - 36087112
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg---aaaacaaaccaggccaaacggtacctta 109  Q
    |||||||||||||||||||||||   |||| |||||||||||||| |||||||||||   ||||||||||||| ||||||||||||||    
T  36087025 ggtactttattgatattgtgtttgaactaacttctccttaaaaacgtagaaaagctggaaaaaacaaaccaggtcaaacggtacctta 36087112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 31970958 - 31970875
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaa-accaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||| ||  || |||||||||||||||    
T  31970958 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaatgccgggccaaacggtacct 31970875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 35422931 - 35422849
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg-aaaacaaaccaggccaaacggtacc 106  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||| |||| ||||| | ||||||||||||    
T  35422931 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaagctgaaaaaaaaaccggaccaaacggtacc 35422849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 6034800 - 6034719
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacc 106  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||| ||  | |||| |||||||||    
T  6034800 ggtactttattgatattgtttttggcctaacttctccttaaaaacgtagaaaagctgaaaaaaagtcgggccgaacggtacc 6034719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 36079934 - 36080018
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| |||| |||||| ||| ||  | |||||||||||||||||    
T  36079934 ggtactttattgatattgtgtttggcctagcttctccttaaaaacatagagaagctggaaaaaagtcgggccaaacggtacctta 36080018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 45473604 - 45473525
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtac 105  Q
    |||||||||||||||||||||| |||||| |||||||||||||  ||||||||||| ||| || ||||  ||||||||||    
T  45473604 gtactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaagctggaaaaaagccagttcaaacggtac 45473525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 2179197 - 2179119
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggta 104  Q
    |||||||||||||||||||||| |||||| |||||||||||||  |||| || ||||||| || || ||||||||||||    
T  2179197 gtactttattgatattgtgtttggcctaacttctccttaaaaatgtagagaaactgaaaaaaagccgggccaaacggta 2179119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 669268 - 669328
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| |||||  |||||||||||||  |||||||||||||||    
T  669268 ggtactttattgatattgtgtttggcctaccttctccttaaaaatgtagaaaagctgaaaa 669328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 1834715 - 1834655
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||| ||||||| |||||||    
T  1834715 ggtactttattgatattgtgtttggcctaacttcttcttaaaaacgtagaaaaactgaaaa 1834655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 3244438 - 3244498
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  |||| ||||||||||    
T  3244438 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagagaagctgaaaa 3244498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 7228707 - 7228651
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaa 83  Q
    ||||||||||||||||||||| |||||| |||||||||||||| ||||||| |||||    
T  7228707 tactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaaactgaa 7228651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 18171087 - 18171143
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| |||||||||||    
T  18171087 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctg 18171143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 38961271 - 38961323
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaa 77  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||    
T  38961271 ggtactttattgatattgtgtttggcctaacttctccttaaaaacatagaaaa 38961323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 7273813 - 7273757
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    ||||||||||||||||||||||| |||||  |||||||||||||  |||||||||||    
T  7273813 ggtactttattgatattgtgtttggcctagcttctccttaaaaatgtagaaaagctg 7273757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 10119751 - 10119672
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtac 105  Q
    |||||||||| ||||||||||||  ||||| |||||||||||||  |||| |||||||||| ||||| || ||||||||||    
T  10119751 ggtactttat-gatattgtgtttgacctaacttctccttaaaaatgtagagaagctgaaaaaaaaccgggtcaaacggtac 10119672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 17052079 - 17052135
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    ||||||||||||||||||||||| |||||  |||||||||||||  |||||||||||    
T  17052079 ggtactttattgatattgtgtttggcctagcttctccttaaaaatgtagaaaagctg 17052135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 20642872 - 20642924
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaa 77  Q
    ||||||||||||||||||| |||||||||| |||||||||||||  |||||||    
T  20642872 ggtactttattgatattgtatttagcctaacttctccttaaaaatgtagaaaa 20642924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 32291553 - 32291473
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtac 105  Q
    |||||||| ||||||||||||||  ||||| |||||||||||||  |||| |||||||||| || || ||| |||||||||    
T  32291553 ggtactttcttgatattgtgtttgacctaacttctccttaaaaatgtagagaagctgaaaagaagccgggctaaacggtac 32291473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 34911791 - 34911731
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||| |||||||||||||||||| |||||| |||||||||||||  ||||||| |||||||    
T  34911791 ggtattttattgatattgtgtttggcctaacttctccttaaaaatatagaaaaactgaaaa 34911731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 38708870 - 38708810
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||  |||||  |||||||||||||  |||||||||||||||    
T  38708870 ggtactttattgatattgtgttcggcctagcttctccttaaaaatgtagaaaagctgaaaa 38708810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 9919925 - 9920009
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg-aaaacaaaccaggccaaacggtacctta 109  Q
    |||||| ||||||||||| ||| |||||| |||||||||||||  |||||||| || |||| ||||| || ||||||||| ||||    
T  9919925 gtacttaattgatattgtatttggcctaacttctccttaaaaatgtagaaaagttgaaaaaaaaaccgggtcaaacggtatctta 9920009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 9922454 - 9922514
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||  |||||||| ||||||    
T  9922454 ggtactttattgatattgtgtttgacctaacttctccttaacaatgtagaaaagttgaaaa 9922514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 10049927 - 10049969
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  10049927 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 10049969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 10823525 - 10823567
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  10823525 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 10823567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 38878276 - 38878218
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaa 83  Q
    ||||||||||||||||| |||||  ||||| |||| ||||||||  |||||||||||||    
T  38878276 ggtactttattgatattctgtttgacctaacttctacttaaaaatgtagaaaagctgaa 38878218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 9545559 - 9545600
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    ||||| ||||||||||||||| |||||| |||||||||||||    
T  9545559 tacttaattgatattgtgtttggcctaacttctccttaaaaa 9545600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 22077356 - 22077296
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||| ||||||||||||||||||  ||||  |||||||||||||  |||| ||||||||||    
T  22077356 ggtattttattgatattgtgtttgacctagcttctccttaaaaatgtagagaagctgaaaa 22077296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 24521875 - 24521791
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaa-accaggccaaacggtacctta 109  Q
    |||||| ||||||||||| ||| |||||| |||||||||||||  |||| ||| |||||| || ||| || ||||||||| ||||    
T  24521875 gtacttaattgatattgtatttggcctaacttctccttaaaaatgtagagaagttgaaaaaaataccgggtcaaacggtatctta 24521791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 4e-26; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 39684437 - 39684353
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| || || || ||||||||||||||    
T  39684437 ggtactttattgatattgtgtttggcctagtttctccttaaaaacttagaaaagctgaaaaaaagccgggtcaaacggtacctta 39684353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 7218075 - 7217986
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaatata 114  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||  | || ||||||||||||||| ||||||    
T  7218075 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctgaaaaatagccgggccaaacggtacctaaatata 7217986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 27466432 - 27466343
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaatata 114  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||| ||||| |||||||| |||||||| ||||    
T  27466432 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaaaccgggccaaacagtaccttagtata 27466343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 14717958 - 14717874
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||| ||||||| ||||| || ||||||||||||||    
T  14717958 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaaactgaaaaaaaaccgggtcaaacggtacctta 14717874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 45499730 - 45499652
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggt 103  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| || || |||||||||||    
T  45499730 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctgaaaaaaagccgggccaaacggt 45499652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 44907621 - 44907532
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagct-gaaaacaaaccaggccaaacggtaccttaatat 113  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  |||||||||| ||||| ||||| |||||||||||||||| ||||    
T  44907621 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaagctggaaaaaaaacccggccaaacggtaccttgatat 44907532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 16242263 - 16242343
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtac 105  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||| || || |||||||||||||    
T  16242263 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaagccgggccaaacggtac 16242343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 29570636 - 29570557
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggta 104  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||  | ||||||||||||    
T  29570636 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctgaaaaaaagtcgggccaaacggta 29570557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 17047068 - 17047150
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||||||||||| |||||| || || |||||||| ||||||    
T  17047068 ggtactttattgatattgtgtttggcctatcttctccttaaaaacttagaaaagttgaaaaaaagccgggccaaacagtacct 17047150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 44604427 - 44604487
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||    
T  44604427 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctgaaaa 44604487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 36217958 - 36218037
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggta 104  Q
    ||||||||||||||||||||||| || ||  |||||||||||||| ||||||||||||||| || || ||||||||||||    
T  36217958 ggtactttattgatattgtgtttggcttagcttctccttaaaaacgtagaaaagctgaaaaaaagccgggccaaacggta 36218037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 12261920 - 12261823
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa--ccaggccaaacggtacctta-atatatttta 119  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||| |||   | |||||||||||| |||| ||||||||||    
T  12261920 ggtactttattgatattgtgtttggcctaacttctccttaaaaatatagaaaagctgaaaaaaaaagtcgggccaaacggtatcttatatatatttta 12261823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 16844030 - 16843949
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacc 106  Q
    ||||||||| ||||||||||||| |||||| |||||||||||||  ||||||||||||||| ||  ||| ||||||||||||    
T  16844030 ggtactttagtgatattgtgtttggcctaacttctccttaaaaatgtagaaaagctgaaaaaaagtcagaccaaacggtacc 16843949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 6746302 - 6746211
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa----ccaggccaaacggtaccttaata 112  Q
    ||||||||||||||||||||||| |||||| ||||||||||||   || |||||||||||| |||    |||||||||||||||||| ||||    
T  6746302 ggtactttattgatattgtgtttggcctaacttctccttaaaattgtaaaaaagctgaaaaaaaaaaagccaggccaaacggtacctaaata 6746211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 17314643 - 17314725
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    |||||||||||||||||||||||  ||||  |||||||||||||| |||||||  |||||| ||  |||||||||||||||||    
T  17314643 ggtactttattgatattgtgtttgacctagcttctccttaaaaacgtagaaaacttgaaaaaaagacaggccaaacggtacct 17314725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 34804480 - 34804398
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||| ||||| |||||  |||||||||||||| ||||||||||||||| |  || || ||||||||||||    
T  34804480 ggtactttattgatattatgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaatgccgggtcaaacggtacct 34804398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 43819363 - 43819448
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttag-aaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||| |||||||||||| || || || |||||| |||||||    
T  43819363 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaaagctgaaaaaaagccgggtcaaacgatacctta 43819448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 14451424 - 14451508
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||| |||||  ||||| |||||||||||||  ||||||||||| ||| ||||| |  ||||||||||||||    
T  14451424 ggtactttattgatattatgtttgacctaacttctccttaaaaatgtagaaaagctggaaaaaaaccggatcaaacggtacctta 14451508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 38139687 - 38139747
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| | |||| |||||||||||||  |||||||||||||||    
T  38139687 ggtactttattgatattgtgtttggtctaacttctccttaaaaatgtagaaaagctgaaaa 38139747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 39995014 - 39994930
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||| |||||||| ||||| ||||||||  ||||| ||  | | |||||||||||||||    
T  39995014 ggtactttattgatattgtgtttggcctaacttctccttcaaaacgtagaaaagtggaaaaaaagtcggaccaaacggtacctta 39994930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 41360014 - 41359958
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    |||||||||||||||||||||||  ||||  ||||||||||||||||||||||||||    
T  41360014 ggtactttattgatattgtgtttgacctagcttctccttaaaaacttagaaaagctg 41359958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 39524594 - 39524509
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaa 110  Q
    ||||||||||| |||||||||||  |||||  |||| ||||||   ||||||||||||||| ||||| || |||||||||||||||    
T  39524594 ggtactttattaatattgtgtttgacctaacctctctttaaaattgtagaaaagctgaaaaaaaaccgggacaaacggtaccttaa 39524509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 41525464 - 41525384
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg--aaaacaaaccaggccaaacggt 103  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  || ||||||||  |||| ||  |||||||||||||    
T  41525464 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtaaaaaagctggaaaaaaaagtcaggccaaacggt 41525384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 36060195 - 36060255
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| |||||  |||||||||||||  |||| ||||||||||    
T  36060195 ggtactttattgatattgtgtttggcctagcttctccttaaaaatgtagagaagctgaaaa 36060255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 42983143 - 42983083
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||| |||||  ||||| ||||||||||||| ||||| ||||||||||    
T  42983143 ggtactttattgatattctgtttgacctaacttctccttaaaaatttagagaagctgaaaa 42983083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 40049637 - 40049724
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg-----aaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  |||||||||||||  |||||||| ||     |||| ||| |||||||||||||||||    
T  40049637 ggtactttattgatattgtgtttggcctaccttctccttaaaaatgtagaaaagttgaagaaaaaaaaaatcaggccaaacggtacct 40049724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 6656595 - 6656506
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg--aaaacaaaccaggccaaacggtaccttaata 112  Q
    ||||||||||||||||||||||| | |||  |||||||||||| | |||||||||||  |||| || || |||||| |||||||| ||||    
T  6656595 ggtactttattgatattgtgtttggtctatcttctccttaaaatcgtagaaaagctggaaaaaaaagccgggccaagcggtacctaaata 6656506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 6736997 - 6736908
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg--aaaacaaaccaggccaaacggtaccttaata 112  Q
    ||||||||||||||||||||||| | |||  |||||||||||| | |||||||||||  |||| || || |||||| |||||||| ||||    
T  6736997 ggtactttattgatattgtgtttggtctatcttctccttaaaatcgtagaaaagctggaaaaaaaagccgggccaagcggtacctaaata 6736908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 111
Target Start/End: Complemental strand, 38138548 - 38138462
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    ||||||||||||||||||| ||| |||||  || |||||||||   |||||||||| |||| || || ||||||||||||| |||||    
T  38138548 ggtactttattgatattgtatttggcctagcttatccttaaaattgtagaaaagctaaaaaaaagccgggccaaacggtactttaat 38138462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 11923435 - 11923354
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||  ||||| |||||||||||||| |||| || |||  || || || | |||||||||||||    
T  11923435 gtactttattgatattgtgtttgacctaacttctccttaaaaacatagagaaactgggaaaaagccggaccaaacggtacct 11923354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 41152916 - 41152875
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  41152916 tacttaattgatattgtgtttagcctaacttctccttaaaaa 41152875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 3750641 - 3750555
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa---ccaggccaaacggtacctta 109  Q
    |||||| ||||||||||| ||| |||||| ||||||||||||| ||| | ||| |||||| |||   ||||| ||||||||||||||    
T  3750641 gtacttaattgatattgtatttggcctaacttctccttaaaaatttaaagaagttgaaaaaaaaaacccaggtcaaacggtacctta 3750555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 35003308 - 35003252
Alignment:
Q  29 ctttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||||||||||||||||||  ||||  |||||||||||||  |||||||||||||||    
T  35003308 ctttattgatattgtgtttgacctagcttctccttaaaaatgtagaaaagctgaaaa 35003252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 34996676 - 34996633
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    ||||||||||||||||||||||| || ||| |||||||||||||    
T  34996676 ggtactttattgatattgtgtttggcttaacttctccttaaaaa 34996633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 41153638 - 41153579
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||||| ||||||||||| |||||||||| |||||||||||||  |||| ||| ||||||    
T  41153638 gtacttaattgatattgtatttagcctaacttctccttaaaaatgtagagaagttgaaaa 41153579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 3749912 - 3749870
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  3749912 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 3749870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 29868350 - 29868268
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    |||||||||||||||||||||  ||||| || | ||||||||| |||| ||| || ||| ||||| |  ||||||||||||||    
T  29868350 tactttattgatattgtgtttgacctaacttattcttaaaaacgtagagaagttggaaaaaaaccggatcaaacggtacctta 29868268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 22358862 - 22358946
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    |||||| |||||||||||  || |||||| |||||||||||||  |||| ||| |||||| ||||| || ||||||||| ||||||    
T  22358862 gtacttaattgatattgtacttggcctaacttctccttaaaaatgtagagaagttgaaaa-aaaccgggtcaaacggtatcttaat 22358946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 25346373 - 25346329
Alignment:
Q  34 ttgatattgtgtttagcctaatttctccttaaaaacttagaaaag 78  Q
    ||||||||||||||  |||||||||||||||||||  ||||||||    
T  25346373 ttgatattgtgtttgacctaatttctccttaaaaatgtagaaaag 25346329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 27747627 - 27747545
Alignment:
Q  28 actttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaac---caggccaaacggtacct 107  Q
    |||| |||||||| ||||||  ||||| |||||||||| ||| |||| |||||||||| || |   |||||||||||||||||    
T  27747627 acttaattgatatagtgtttgacctaacttctccttaataacgtagagaagctgaaaaaaatcagtcaggccaaacggtacct 27747545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 3849241 - 3849159
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||| || || |||||||||||||||    
T  3849241 ggtactttattgatattgtgtttggcctagcttctccttaaaaacttagaaaagctgaaaaaaagccgggccaaacggtacct 3849159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 557622 - 557537
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa-ccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||| ||| || |||||||||||||||||    
T  557622 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaaagccgggccaaacggtacctta 557537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 29042386 - 29042299
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa---ccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||| |||   || | |||||||||||||||    
T  29042386 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaagctgaaaaaaaaaagccggaccaaacggtacctta 29042299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 33946764 - 33946849
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaa 110  Q
    |||||||||||||||||||||||  ||||| |||||||||||||| ||| ||||||||||| ||  | || |||||||||||||||    
T  33946764 ggtactttattgatattgtgtttgacctaacttctccttaaaaacgtaggaaagctgaaaaaaagtcgggtcaaacggtaccttaa 33946849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 26183580 - 26183496
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||  |||| ||||||||| ||||||||||||||| ||  | ||||||||| |||||||    
T  26183580 ggtactttattgatattgtgtttggcctagcttcttcttaaaaacgtagaaaagctgaaaaaaagtcgggccaaacgatacctta 26183496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 29975483 - 29975423
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  |||||||||||||||    
T  29975483 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaagctgaaaa 29975423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 20790247 - 20790160
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa---ccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||| ||||||| |||   || || ||||||||||||||    
T  20790247 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaaactgaaaaaaaaaagccggggcaaacggtacctta 20790160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 18595536 - 18595596
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||||||||||||||||||||||  ||||  |||||||||||||| |||||||||||||||    
T  18595536 ggtactttattgatattgtgtttgacctagcttctccttaaaaacgtagaaaagctgaaaa 18595596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 19988072 - 19988012
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| |||||  |||||||||||||  |||||||||||||||    
T  19988072 ggtactttattgatattgtgtttggcctagcttctccttaaaaatgtagaaaagctgaaaa 19988012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 32244146 - 32244090
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| |||||||||||    
T  32244146 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctg 32244090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 1949512 - 1949458
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    ||||||||||||||||||||| |||||| |||||||||||||  |||||||||||    
T  1949512 tactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaagctg 1949458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 17504628 - 17504570
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaa 83  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  ||||||| |||||    
T  17504628 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaaactgaa 17504570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 10944874 - 10944831
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    ||||||||||||||||||||||| |||||| |||||||||||||    
T  10944874 ggtactttattgatattgtgtttggcctaacttctccttaaaaa 10944831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 6019398 - 6019480
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  ||||||||||||   || |||| ||||||| || ||  ||||||||||||||    
T  6019398 ggtactttattgatattgtgtttggcctagcttctccttaaaattgtaaaaaaactgaaaaaaagccgagccaaacggtacct 6019480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 174924 - 175004
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||  ||||  ||||| |||||||  ||||||| ||||||| || | ||||||||||||||||    
T  174924 gtactttattgatattgtgtttgacctatcttctctttaaaaatgtagaaaaactgaaaa-aagctaggccaaacggtacct 175004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 34207950 - 34208007
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaa 83  Q
    ||||||||||||||||||||||  ||||| |||||||||||||  ||||||| |||||    
T  34207950 gtactttattgatattgtgtttgacctaacttctccttaaaaatgtagaaaaactgaa 34208007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 25530277 - 25530194
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    |||||| ||||||||||| |||  ||||| |||||||||| ||  |||| ||| |||||| |||||||| ||||||||| ||||    
T  25530277 gtacttaattgatattgtatttgacctaacttctccttaataatgtagagaagttgaaaaaaaaccaggacaaacggtatctta 25530194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 6832585 - 6832543
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||||||||| ||||||||| |||||| |||||||||||||    
T  6832585 gtactttattgagattgtgtttggcctaacttctccttaaaaa 6832543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 15045342 - 15045384
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  15045342 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 15045384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 28193244 - 28193202
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  28193244 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 28193202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 34248679 - 34248721
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaa 67  Q
    ||||||||||||||||||||||| |||||  ||||||||||||    
T  34248679 ggtactttattgatattgtgtttggcctagcttctccttaaaa 34248721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 34317284 - 34317242
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  34317284 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 34317242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 35133523 - 35133481
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  35133523 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 35133481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 111
Target Start/End: Complemental strand, 18311508 - 18311423
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    |||||| |||||||||||  || |||||| |||||||||||||  |||| ||  |||||| ||||| || ||||||||| ||||||    
T  18311508 gtacttaattgatattgtacttggcctaacttctccttaaaaatgtagagaaattgaaaaaaaaccgggtcaaacggtatcttaat 18311423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 28193970 - 28193913
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaa 83  Q
    |||||| ||||||||||| ||| |||||| ||||||||||||| ||||| ||| ||||    
T  28193970 gtacttaattgatattgtatttggcctaacttctccttaaaaatttagagaagttgaa 28193913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 33904 - 33820
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||| || || |||||||||||||||||    
T  33904 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaagccgggccaaacggtacctta 33820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 9e-24; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 16051832 - 16051916
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||| || || |||||||||||| ||||    
T  16051832 ggtactttattgatattgtgtttggcttaacttctccttaaaaacttagaaaagctgaaaaaaagccgggccaaacggtatctta 16051916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 666624 - 666711
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaata 112  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||| || || ||||||||||||||| ||||    
T  666624 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaagccgggccaaacggtacctgaata 666711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 5590526 - 5590611
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg---aaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||   |||| |||||||||||||||||||||    
T  5590526 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctggaaaaaaaaaaccaggccaaacggtacct 5590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 24758068 - 24757986
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||| || || |||||||||||||||    
T  24758068 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaagctgaaaaaaagccgggccaaacggtacct 24757986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 29384836 - 29384922
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||| || ||  ||||||||||||||||||    
T  29384836 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaagccgagccaaacggtaccttaat 29384922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 24029246 - 24029328
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| || ||| |||||||||||||| || |||||||||||| || || |||||||||||||||    
T  24029246 ggtactttattgatattgtgtttggcttaacttctccttaaaaacgtaaaaaagctgaaaaaaagccgggccaaacggtacct 24029328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 111
Target Start/End: Complemental strand, 40307005 - 40306919
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||| |||||||||| ||  | || ||||||||||||||||    
T  40307005 ggtactttattgatattgtgtttggcctaacttctccttaaaaacatagagaagctgaaaaaaagtcggggcaaacggtaccttaat 40306919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 25819830 - 25819749
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacc 106  Q
    ||||||||||||||||||||||| || ||  |||||||||||||| ||||||||||||||| ||| | ||||||||||||||    
T  25819830 ggtactttattgatattgtgtttggcttagcttctccttaaaaacgtagaaaagctgaaaaaaaatcgggccaaacggtacc 25819749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 2476593 - 2476671
Alignment:
Q  29 ctttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||| || || | |||||||||||||    
T  2476593 ctttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaagctgaaaaaaagccggaccaaacggtacct 2476671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 26378229 - 26378147
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||| ||| ||  | || ||||||||||||    
T  26378229 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctggaaaaaagtcgggtcaaacggtacct 26378147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 31940892 - 31940977
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagct-gaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||| ||||| ||  |||| |||| |||||||||    
T  31940892 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctggaaaaaaagtcaggtcaaaaggtacctta 31940977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 6930205 - 6930289
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| |||||||| |||||| ||||| |  |||| |||||||||    
T  6930205 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagttgaaaaaaaaccggatcaaatggtacctta 6930289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 27178049 - 27178105
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  27178049 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctg 27178105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 3244634 - 3244544
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa-ccaggccaaacggtaccttaatata 114  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||  |||| |||||||||| |||  | || |||||||||||||||||||    
T  3244634 ggtactttattgatattgtgtttggtctagtttctccttaaaaatgtagagaagctgaaaaaaaagtctgggcaaacggtaccttaatata 3244544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 42112661 - 42112746
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    ||||||||||||||||||||||  |||||| |||||||||||||  ||||||||||||||| |  || |||||||| ||||||||||    
T  42112661 ggtactttattgatattgtgttaggcctaacttctccttaaaaatgtagaaaagctgaaaaaatgccgggccaaac-gtaccttaat 42112746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 42321315 - 42321234
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    |||||||||||||||||||||||  ||||  |||||||||||||| ||||||||||||||| || || ||||||| |||||||    
T  42321315 ggtactttattgatattgtgtttgacctagcttctccttaaaaacgtagaaaagctgaaaa-aagccgggccaaatggtacct 42321234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 4375903 - 4375963
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||| |||||||| ||||||    
T  4375903 ggtactttattgatattatgtttggcctaacttctccttaaaaacgtagaaaagttgaaaa 4375963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 16167188 - 16167254
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaacc 91  Q
    ||||||||||||||||||||||| |||||  |||||||||||||  |||| |||||||||| |||||    
T  16167188 ggtactttattgatattgtgtttggcctagcttctccttaaaaatgtagagaagctgaaaaaaaacc 16167254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 111
Target Start/End: Complemental strand, 20338908 - 20338822
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    ||||||||||||||||||||||| |||||  ||||||||||||| | ||| |||||||||| ||  | || |||| |||||||||||    
T  20338908 ggtactttattgatattgtgtttggcctagcttctccttaaaaattgagagaagctgaaaaaaagtcgggtcaaatggtaccttaat 20338822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 31885709 - 31885767
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaa 83  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| ||||||| |||||    
T  31885709 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaaactgaa 31885767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 42415839 - 42415761
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggt 103  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  |||| || ||||||| || || | |||||||||    
T  42415839 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagagaaactgaaaaaaagccggaccaaacggt 42415761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 43395648 - 43395590
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaa 83  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  ||||||| |||||    
T  43395648 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaaactgaa 43395590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 10041946 - 10041889
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaa 84  Q
    ||||||||||||||||||||| |||||| |||||||||||||  |||| |||||||||    
T  10041946 tactttattgatattgtgtttggcctaacttctccttaaaaatgtagataagctgaaa 10041889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 16939544 - 16939492
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaa 77  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  |||||||    
T  16939544 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaa 16939492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 2529215 - 2529136
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtac 105  Q
    |||||||||||||||||||||| |||||| ||||||||||||   |||| |||| ||||| || || || ||||||||||    
T  2529215 gtactttattgatattgtgtttggcctaacttctccttaaaagtatagagaagccgaaaaaaagccggggcaaacggtac 2529136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 32263357 - 32263408
Alignment:
Q  30 tttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    |||||||||||||||||| |||||  |||||||||||||| |||||||||||    
T  32263357 tttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctg 32263408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 33708756 - 33708798
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| ||||||||||||||||||||    
T  33708756 gtacttaattgatattgtgtttggcctaatttctccttaaaaa 33708798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 34442365 - 34442423
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaa 83  Q
    |||||||||||||||||||||||  ||||  |||||||||||||| ||||||| |||||    
T  34442365 ggtactttattgatattgtgtttgacctagcttctccttaaaaacgtagaaaaactgaa 34442423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 7535798 - 7535738
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||||||||||||||||  ||||||||||  |||||||||||||  |||| ||||||||||    
T  7535798 ggtactttattgatattaggtttagcctagcttctccttaaaaatgtagagaagctgaaaa 7535738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 37146203 - 37146151
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaa 77  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||  |||||||    
T  37146203 ggtactttattaatattgtgtttggcctaacttctccttaaaaatgtagaaaa 37146151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 9813711 - 9813770
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||||| |||||||||| |||| |||||| |||||||||||||| |||| ||| ||||||    
T  9813711 gtacttaattgatattgcgtttggcctaacttctccttaaaaacgtagagaagttgaaaa 9813770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 12591469 - 12591528
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||||| ||||||||||| ||| |||||| |||||||||||||  |||||||| ||||||    
T  12591469 gtacttaattgatattgtatttggcctaacttctccttaaaaatgtagaaaagttgaaaa 12591528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 12705836 - 12705895
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||||| |||||||||| |||| |||||| |||||||||||||| |||| ||| ||||||    
T  12705836 gtacttaattgatattgcgtttggcctaacttctccttaaaaacgtagagaagttgaaaa 12705895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 30140855 - 30140813
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  30140855 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 30140813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 35542078 - 35542156
Alignment:
Q  34 ttgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg-aaaacaaaccaggccaaacggtaccttaat 111  Q
    |||||||||| ||| ||||||||||||||||||||  |||| ||| || |||| ||||| || ||||||||| ||||||    
T  35542078 ttgatattgtatttggcctaatttctccttaaaaatgtagagaagttgaaaaaaaaaccgggtcaaacggtatcttaat 35542156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 35381367 - 35381408
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    ||||||||||||||||||||| | |||| |||||||||||||    
T  35381367 tactttattgatattgtgtttggtctaacttctccttaaaaa 35381408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 19358470 - 19358411
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||| |||||| ||||||||||| |||||| |||||| ||||||  |||||||||||||||    
T  19358470 ggtattttattaatattgtgtttggcctaacttctcc-taaaaatgtagaaaagctgaaaa 19358411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 36241475 - 36241415
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||||||||||||||||||||||  ||||| ||||||| |||||  |||| ||||| ||||    
T  36241475 ggtactttattgatattgtgtttgacctaacttctcctcaaaaatgtagagaagctaaaaa 36241415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 111
Target Start/End: Complemental strand, 43353251 - 43353164
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa--ccaggccaaacggtaccttaat 111  Q
    |||||| ||||||||||||||| |||||| |||||||| ||||  |||| ||| |||||| |||  |  || ||||||||||||||||    
T  43353251 gtacttaattgatattgtgtttggcctaacttctccttgaaaatgtagagaagttgaaaaaaaaagctgggtcaaacggtaccttaat 43353164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 4e-23; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 3263841 - 3263758
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa-ccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  3263841 tactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaaaaaagccaggccaaacggtacctta 3263758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 33641301 - 33641219
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| || || | |||||||||||||    
T  33641301 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctgaaaaaaagccggaccaaacggtacct 33641219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 40433592 - 40433674
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| || || | |||||||||||||    
T  40433592 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctgaaaaaaagccggaccaaacggtacct 40433674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 43122161 - 43122243
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||| ||||||| || || |||||||||||||||    
T  43122161 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaaactgaaaaaaagccgggccaaacggtacct 43122243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 38799284 - 38799199
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaa 110  Q
    |||| |||| ||||||||||||| ||||||||||||||||||||| ||||||| ||||||| ||||| || |||||||||||||||    
T  38799284 ggtaatttactgatattgtgtttggcctaatttctccttaaaaacgtagaaaaactgaaaaaaaaccgggtcaaacggtaccttaa 38799199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 11755262 - 11755350
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttag-aaaagctgaaaacaaaccaggccaaacggtaccttaata 112  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||| ||| |||||||||||| ||  ||||||||||||||||||||||    
T  11755262 ggtactttattgatattatgtttggcctaacttctccttaaaaacgtagaaaaagctgaaaaaaagtcaggccaaacggtaccttaata 11755350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 51835051 - 51834967
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||  | || ||||||||||||||    
T  51835051 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctgaaaaaaagtcggggcaaacggtacctta 51834967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 33375211 - 33375294
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa-ccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| |||  | |||||||||||||||    
T  33375211 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctgaaaaaaaagtcgggccaaacggtacct 33375294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 16096025 - 16095945
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtac 105  Q
    ||||||||||||||||||||||| | |||| |||||||||||||| |||| |||||| ||| || ||||||||||||||||    
T  16096025 ggtactttattgatattgtgtttggtctaacttctccttaaaaacatagagaagctggaaaaaagccaggccaaacggtac 16095945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 25661191 - 25661275
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| |||||||  |||||| || || |||||||||||||||||    
T  25661191 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaaattgaaaaaaagccgggccaaacggtacctta 25661275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 39328106 - 39328166
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  39328106 ggtactttattgatattgtgtttggcctagtttctccttaaaaacatagaaaagctgaaaa 39328166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 9573874 - 9573815
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  9573874 gtactttattgatattgtgtttggcctaacttctccttaaaaacttagaaaagctaaaaa 9573815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 36166567 - 36166653
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa--ccaggccaaacggtacctta 109  Q
    |||||||||||||||||||||||  ||||| |||||||||||||| ||||||||||||||| |||   |||| ||||||||||||||    
T  36166567 ggtactttattgatattgtgtttgccctaacttctccttaaaaacgtagaaaagctgaaaaaaaaagtcaggtcaaacggtacctta 36166653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 41902745 - 41902831
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa--ccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||  |||| ||||||||| ||||||||||||||| |||   |||||||||||||||||||    
T  41902745 ggtactttattgatattgtgtttggcctagcttcttcttaaaaacgtagaaaagctgaaaaaaaaagtcaggccaaacggtacctta 41902831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 17367321 - 17367403
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    |||||||||||||||||||||||  ||||| |||| ||||||||  ||||||||||||||| || || |||||||||||||||    
T  17367321 ggtactttattgatattgtgtttgccctaacttcttcttaaaaatgtagaaaagctgaaaaaaagccgggccaaacggtacct 17367403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 33932077 - 33931995
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    |||||||||||||||||||||||  ||||| |||||||||||||  |||||||||||||||  | || |||||||||||||||    
T  33932077 ggtactttattgatattgtgtttgacctaacttctccttaaaaatgtagaaaagctgaaaaatagccgggccaaacggtacct 33931995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 1323445 - 1323529
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  |||| |||||||||| ||    |||||||||||||||||    
T  1323445 ggtactttattgatattgtgtttggcctaacttctccttaaaaatatagagaagctgaaaaaaagttgggccaaacggtacctta 1323529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 37824971 - 37825031
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  |||||||||||||||    
T  37824971 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaagctgaaaa 37825031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 45102875 - 45102796
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggta 104  Q
    ||||||||||||||||| ||||| |||||| ||||| |||||||| ||||||||||||||| || || | ||||||||||    
T  45102875 ggtactttattgatattatgtttggcctaacttctctttaaaaacgtagaaaagctgaaaaaaagccggaccaaacggta 45102796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 11582175 - 11582089
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa-ccaggccaaacggtaccttaa 110  Q
    |||| |||||||||||||||||| |||||  ||||||||||||||||||||||||| |||| |||  | || |||||||||||||||    
T  11582175 ggtattttattgatattgtgtttggcctagcttctccttaaaaacttagaaaagctcaaaaaaaagtcgggtcaaacggtaccttaa 11582089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 17248074 - 17247992
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  |||||||||||||  |||||||||| |||  || || |||||||||||||||    
T  17248074 ggtactttattgatattgtgtttggcctagcttctccttaaaaatgtagaaaagctaaaagaaagccgggccaaacggtacct 17247992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 51039026 - 51039084
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||| |||||| |||||||||||||  |||||||||||||||    
T  51039026 tactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaagctgaaaa 51039084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 39730123 - 39730204
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacc 106  Q
    ||||||||||||||||||||||| |||||  ||||| |||||||  | ||||||||||||| || || ||||||||||||||    
T  39730123 ggtactttattgatattgtgtttggcctagcttctcattaaaaatgttgaaaagctgaaaaaaagccgggccaaacggtacc 39730204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 17584591 - 17584535
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| |||||||||||    
T  17584591 ggtactttattgatattgtgtttggcctaccttctccttaaaaacgtagaaaagctg 17584535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 33825556 - 33825616
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| |||||||| ||||||    
T  33825556 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagttgaaaa 33825616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 33878628 - 33878688
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| |||||||| ||||||    
T  33878628 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagttgaaaa 33878688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 33896596 - 33896652
Alignment:
Q  29 ctttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||| |||||  |||||||||||||| |||||||||||||||    
T  33896596 ctttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaa 33896652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 31222482 - 31222570
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg--aaaacaaaccaggccaaacggtaccttaat 111  Q
    |||||||| || ||||||||||| |||||| |||||||||||||  |||||||||||  |||| ||| | ||||||||||||| |||||    
T  31222482 ggtacttttttaatattgtgtttggcctaacttctccttaaaaatgtagaaaagctggaaaaaaaaatcgggccaaacggtactttaat 31222570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 39880053 - 39880135
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaa-ccaggccaaacggtacctta 109  Q
    |||||||||||||||||||||| |||||| |||||||||||||  |||| |||||||||| ||| || | |||||||||| ||||    
T  39880053 gtactttattgatattgtgtttggcctaacttctccttaaaaa--tagagaagctgaaaaaaaagccggaccaaacggtatctta 39880135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 7830634 - 7830574
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||||||||| |||||||||||| || ||  |||||||||||||| |||||||||||||||    
T  7830634 ggtactttatcgatattgtgtttggcttagcttctccttaaaaacgtagaaaagctgaaaa 7830574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 24474475 - 24474531
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    ||||||||||||||||||||||| |||||  |||||||||||||  |||||||||||    
T  24474475 ggtactttattgatattgtgtttggcctatcttctccttaaaaatgtagaaaagctg 24474531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 34077458 - 34077398
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| |||||  |||| ||||||||  |||||||||||||||    
T  34077458 ggtactttattgatattgtgtttggcctagcttcttcttaaaaatgtagaaaagctgaaaa 34077398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 23647234 - 23647321
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaatat 113  Q
    |||||||||||||||||||||| |||||  |||| ||||||||  |||| |||||| ||| ||  | |||||||||||||| ||||||    
T  23647234 gtactttattgatattgtgtttggcctagattcttcttaaaaatgtagagaagctggaaaaaagtcgggccaaacggtaccctaatat 23647321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 45588233 - 45588155
Alignment:
Q  31 ttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||| |||||  |||||||||||||  |||| || || |||| ||||| || ||||||||||||||    
T  45588233 ttattgatattgtgtttggcctagcttctccttaaaaatgtagagaaactaaaaaaaaaccgggtcaaacggtacctta 45588155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 44825216 - 44825276
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||| ||||||||||||||||||  ||||| |||||||||||||  |||| ||||||||||    
T  44825216 ggtattttattgatattgtgtttgacctaacttctccttaaaaatgtagagaagctgaaaa 44825276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 29843879 - 29843938
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||||| ||||||||||| ||| |||||| |||||||||||||  |||||||| ||||||    
T  29843879 gtacttaattgatattgtatttggcctaacttctccttaaaaatgtagaaaagttgaaaa 29843938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 52307106 - 52307023
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    |||||| ||||||||||| ||| |||||| |||||||||||||  |||| ||| |||||| | ||| || ||||||||| ||||    
T  52307106 gtacttaattgatattgtatttggcctaacttctccttaaaaatgtagagaagttgaaaaaataccgggtcaaacggtatctta 52307023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 8946943 - 8947025
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    |||||||||||||||||||||||  ||||  |||||||||||||  |||| || |||| || || || ||| |||||||||||    
T  8946943 ggtactttattgatattgtgtttgacctagcttctccttaaaaatgtagagaatctgagaaaaagccgggctaaacggtacct 8947025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 10697888 - 10697930
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  10697888 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 10697930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 19401080 - 19401038
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  19401080 gtacttaattgatattgtgtttggcctaacttctccttaaaaa 19401038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 34651435 - 34651393
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaa 67  Q
    ||||||||||| ||||||||||| |||||| ||||||||||||    
T  34651435 ggtactttattaatattgtgtttggcctaacttctccttaaaa 34651393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 49570362 - 49570304
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaa 83  Q
    |||||||||||||||||||||||  || |  |||||||||||||  |||||||||||||    
T  49570362 ggtactttattgatattgtgtttgacccagcttctccttaaaaatgtagaaaagctgaa 49570304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 52306416 - 52306374
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  52306416 gtacttcattgatattgtgtttggcctaacttctccttaaaaa 52306374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 21966943 - 21967024
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagct-gaaaacaaaccaggccaaacggtac 105  Q
    ||||||||||| ||||||||||| ||| |  |||||||||||||  |||| ||||| ||||| ||||| |||||||| ||||    
T  21966943 ggtactttattaatattgtgtttggcccagcttctccttaaaaatgtagagaagctggaaaaaaaaccgggccaaacagtac 21967024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 42679463 - 42679406
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaa 83  Q
    |||||| ||||||||||| ||| |||||| |||||||||||||  |||||||| ||||    
T  42679463 gtacttaattgatattgtatttggcctaacttctccttaaaaatgtagaaaagttgaa 42679406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 43120082 - 43120142
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| || ||  |||||||||||||  |||| || |||||||    
T  43120082 ggtactttattgatattgtgttttgcttagcttctccttaaaaatgtagagaaactgaaaa 43120142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 43123392 - 43123336
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    ||||||||||||||||| ||||| |||||  |||||||||||||  |||| ||||||    
T  43123392 ggtactttattgatattttgttttgcctagcttctccttaaaaatgtagagaagctg 43123336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 547 - 465
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||| || || |||||||||||||||    
T  547 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaagctgaaaaaaagccgggccaaacggtacct 465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0710 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0710
Description:

Target: scaffold0710; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 98 - 182
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacctta 109  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||  | || ||||||||||||||    
T  98 ggtactttattgatattgtgtttggcctaacttctccttaaaaacgtagaaaagctgaaaaaaagtcggggcaaacggtacctta 182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 5609 - 5527
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||||||||||| |||||| || || |||||||| ||||||    
T  5609 ggtactttattgatattgtgtttggcctatcttctccttaaaaacttagaaaagttgaaaaaaagccgggccaaacagtacct 5527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 227796 - 227712
Alignment:
Q  28 actttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaata 112  Q
    |||| ||||||||||||||| |||||| |||||||||||||| |||| |||||||||| || || || |||||||||||||||||    
T  227796 acttaattgatattgtgtttggcctaacttctccttaaaaacgtagagaagctgaaaaaaagccgggtcaaacggtaccttaata 227712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 91771 - 91853
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    |||| |||||||||||||||||| |||||| |||||||||||||| |||| |||||| ||| ||| | |||||||||||||||    
T  91771 ggtaatttattgatattgtgtttggcctaacttctccttaaaaacgtagagaagctggaaaaaaatcgggccaaacggtacct 91853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 111430 - 111489
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||||||||||||||||||||| |||||| |||||||||||||  ||||||| |||||||    
T  111430 gtactttattgatattgtgtttggcctaacttctccttaaaaatgtagaaaaactgaaaa 111489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 123782 - 123722
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| |||||||||||||||    
T  123782 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctgaaaa 123722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 8351 - 8409
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaa 83  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||| |||||||||||||    
T  8351 ggtactttattgatattctgtttggcctaacttctccttaaaaacgtagaaaagctgaa 8409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 177773 - 177855
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtacct 107  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||| || || | ||||||| |||||    
T  177773 ggtactttattgatattgtgtttggcctaacttcttcttaaaaacgtagaaaagttgaaaaaaagccggaccaaacgatacct 177855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 4343 - 4286
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctga 82  Q
    ||||||||||||||||||||||| | |||| |||||||||||||| ||||||||||||    
T  4343 ggtactttattgatattgtgtttggactaacttctccttaaaaacgtagaaaagctga 4286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 1991 - 1935
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    ||||||||||||||||||||||| |||||  |||||||||||||| |||||||||||    
T  1991 ggtactttattgatattgtgtttggcctagcttctccttaaaaacgtagaaaagctg 1935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 18024 - 18080
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctg 81  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  |||| ||||||    
T  18024 ggtactttattgatattgtgtttggcctaacttctccttaaaaatgtagagaagctg 18080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1793 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1793
Description:

Target: scaffold1793; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 1240 - 1283
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaa 68  Q
    ||||||||||||||||||||||| | |||| |||||||||||||    
T  1240 ggtactttattgatattgtgtttggtctaacttctccttaaaaa 1283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 30873 - 30932
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaa 85  Q
    |||||| ||||||||||| |||||||||| |||||||||||||  |||| ||| ||||||    
T  30873 gtacttaattgatattgtatttagcctaacttctccttaaaaatgtagagaagttgaaaa 30932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 140725 - 140638
Alignment:
Q  25 ggtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaata 112  Q
    |||||||||||||||||||||||  ||||| |||||||| ||||  |||| ||| |||||| ||  | || |||||||||||| ||||    
T  140725 ggtactttattgatattgtgtttgacctaacttctccttgaaaatgtagagaagttgaaaaaaagtcggggcaaacggtacctaaata 140638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 138896 - 138953
Alignment:
Q  27 tactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaa 84  Q
    ||||||||||||||| |||||   ||| ||||||||||||||  ||||||||||||||    
T  138896 tactttattgatattatgtttgatctattttctccttaaaaatgtagaaaagctgaaa 138953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 111
Target Start/End: Complemental strand, 95127 - 95042
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaagctgaaaacaaaccaggccaaacggtaccttaat 111  Q
    |||||| ||||||||||| ||| |||||| |||||||||||||  |||| ||| |||||| ||  | || ||||||||| ||||||    
T  95127 gtacttaattgatattgtattttgcctaacttctccttaaaaatgtagagaagttgaaaaaaactcgggtcaaacggtatcttaat 95042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 18612 - 18664
Alignment:
Q  26 gtactttattgatattgtgtttagcctaatttctccttaaaaacttagaaaag 78  Q
    |||||| ||||||||||||||  |||||| |||||||||||||  ||||||||    
T  18612 gtacttaattgatattgtgttaggcctaacttctccttaaaaatgtagaaaag 18664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University