View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19723_low_44 (Length: 245)
Name: NF19723_low_44
Description: NF19723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19723_low_44 |
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Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 38622115 - 38622338
Alignment:
| Q |
1 |
aggtggttttaacattgaatgaaggatatgataagcacaaagaataactaataactagctggaagctagcattcaaggttgtccagagaataaccagctg |
100 |
Q |
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| T |
38622115 |
aggtggttttaacattgaatgaaggatatgataagcacaaagaataactaataactagctggaagctagcattcaaggttgtccagagaataaccagctg |
38622214 |
T |
|
| Q |
101 |
tttcaacagattcaggtaactaatgatttaattcaagtagaagaacaacacaaaccaaaactaagcacattccagaaactaaaagcttgaaaattgtaca |
200 |
Q |
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| T |
38622215 |
tttcaacagattcaggtaactaatgatttaattcaagtagaagaacaacacaaaccaaaactaagcacattccagaaactaaaagcttgaaaattgtaca |
38622314 |
T |
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| Q |
201 |
aataattaatgaaattaattacaaa |
225 |
Q |
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| T |
38622315 |
aataa-taatgaaattaataacaaa |
38622338 |
T |
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