View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19723_low_56 (Length: 209)
Name: NF19723_low_56
Description: NF19723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19723_low_56 |
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Alignment Details
Target: chr5 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 13 - 194
Target Start/End: Original strand, 15135293 - 15135471
Alignment:
| Q |
13 |
taatactacaatacactaccaagaagaaactgaaatatgcagtagtagta-gtactagtactagaattattgtacttaacctaacaacattaataaccct |
111 |
Q |
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| T |
15135293 |
taatactacaatacactaccaagaagaa-ctgaaatatgcagtagtagtacgtactagtactagaattattgtacttaacctaaca---ttaataactct |
15135388 |
T |
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| Q |
112 |
ctcactacaatatgttaggacttaagattatagaattatatatatgattaattgataattaatacttcaaaatccattattat |
194 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15135389 |
ctcactacaatatgttaggacttaagcttatagaattatatatatgattaattgataattaatacttcaaaatccattattat |
15135471 |
T |
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