View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19723_low_9 (Length: 519)

Name: NF19723_low_9
Description: NF19723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19723_low_9
NF19723_low_9
[»] chr4 (10 HSPs)
chr4 (13-503)||(3557058-3557545)
chr4 (20-503)||(3565076-3565556)
chr4 (20-268)||(1686543-1686788)
chr4 (110-253)||(3561306-3561446)
chr4 (435-503)||(3573289-3573357)
chr4 (441-495)||(1686949-1687003)
chr4 (289-322)||(3561512-3561545)
chr4 (270-322)||(11849195-11849247)
chr4 (270-315)||(1686808-1686853)
chr4 (139-175)||(11971329-11971365)
[»] chr1 (6 HSPs)
chr1 (39-262)||(39379338-39379564)
chr1 (442-503)||(39379744-39379805)
chr1 (269-329)||(39379589-39379649)
chr1 (102-168)||(17561086-17561152)
chr1 (97-153)||(4366821-4366877)
chr1 (294-322)||(17561318-17561346)
[»] chr7 (10 HSPs)
chr7 (110-153)||(29431340-29431383)
chr7 (102-153)||(29454437-29454488)
chr7 (110-165)||(29899044-29899099)
chr7 (270-322)||(29074556-29074608)
chr7 (270-322)||(29106291-29106343)
chr7 (385-416)||(29858852-29858883)
chr7 (134-175)||(22080540-22080581)
chr7 (126-178)||(18983319-18983371)
chr7 (126-178)||(18997965-18998017)
chr7 (126-178)||(19637584-19637636)
[»] chr3 (2 HSPs)
chr3 (124-170)||(3625423-3625469)
chr3 (383-428)||(3625181-3625226)


Alignment Details
Target: chr4 (Bit Score: 176; Significance: 1e-94; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 13 - 503
Target Start/End: Complemental strand, 3557545 - 3557058
Alignment:
Q  13 aatacccagtgattgggatgtcattgtgaatggccaaccagttaagagtgccattaagaaacacatcagtatgattaaattgttcaaaatccaaattaag 112  Q
    |||||| |||||| ||||||||||||| ||| ||||||||||||| |||||  |||||||||||||||||||| | ||||  |||| ||| |||||||||    
T  3557545 aataccaagtgatcgggatgtcattgtaaatagccaaccagttaaaagtgctgttaagaaacacatcagtatgctcaaatccttcataatacaaattaag 3557446  T
Q  113 aggaacaacaaggaaactttcaatatttctccaaacattattacctaaactgaaaactcttacctcacttgtcaaaggattatcatcaatgtaacgtgac 212  Q
    | | |||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |   ||||  ||||||||||||     
T  3557445 atggacaacagggaaactttcaatatttctccaaacattatcacctaaactgaaaactctaacctcacttgtcaaacg---atcacgaatgtaacgtgat 3557349  T
Q  213 gcaaccactttaaaagttccagtggaattatcacaaccaaaattgaagacgaaacc------------------accaatttttggagatatattcctag 294  Q
    |||||||||||||||||  | || |||| |||||||||||||||||||||||||||                  |||||||||||||||||| |||||||    
T  3557348 gcaaccactttaaaagtgtcggtagaatcatcacaaccaaaattgaagacgaaaccaggaagatcacgaaaacaaccaatttttggagatattttcctag 3557249  T
Q  295 tggctgggttccataaacggagccagtagtcataattaaattcagcatcaacggaatgataaacggaaccagctaaagcggaacgtttaccagtcaaaca 394  Q
    ||||||||||||||||||| ||||||||||||||    |||||| ||||| ||||   |||||                |||||| | ||||||||||||    
T  3557248 tggctgggttccataaacgtagccagtagtcata---taattcatcatcatcggaccaataaa---------------tggaacgataaccagtcaaaca 3557167  T
Q  395 aatcaacccattgcaggaaccagctatacgagagcagtctttttcattcaatagatagtgaggatcagcaacaagggtaaacggcgggttatctagtaaa 494  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| || |||||||||  | ||||||||| | ||||||||| ||||||    
T  3557166 aatcaacccattgcaggaacctgctataccagagcagtctttttcattcaatagagagcgaggatcagtgataagggtaaaggacgggttatcgagtaaa 3557067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 20 - 503
Target Start/End: Complemental strand, 3565556 - 3565076
Alignment:
Q  20 agtgattgggatgtcattgtgaatggccaaccagttaagagtgccattaagaaacacatcagtatgattaaattgttcaaaatccaaattaagaggaaca 119  Q
    |||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||   ||||  || | ||||||||  ||||||||||    
T  3565556 agtgatcgggatgtcgttgtgaacagccaaccagttaagagtgccattaagaaacacatcagtatgcccaaatccttgataatccaaacgaagaggaaca 3565457  T
Q  120 acaaggaaactttcaatatttctccaaacattattacctaaactgaaaactcttacctcacttgtcaaaggattatcatcaatgtaacgtgacgcaacca 219  Q
     |  |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||| ||||| |||   ||| ||||||||||||||||||||    
T  3565456 gccgggaaactttcaatatttctccaaacattatcacctaaactgaaaactctcacctcgcttttcaaatgat---catgaatgtaacgtgacgcaacca 3565360  T
Q  220 ctttaaaagttccagtggaattatcacaaccaaaattgaagacgaaacca------------------ccaatttttggagatatattcctagtggctgg 301  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||| |                  ||||||||||||||||| |||||||| |||||    
T  3565359 ctttaaaagttccggtggaattatcacaaccacaattgaagacgaaactatgaagatcacgaaaacaaccaatttttggagatattttcctagtagctgg 3565260  T
Q  302 gttccataaacggagccagtagtcataattaaattcagcatcaacggaatgataaacggaaccagctaaagcggaacgtttaccagtcaaacaaatcaac 401  Q
    ||||||||||||||||||||| |||||   | |||||| |||| | |||  ||||| | ||| |               | |||||||||||| ||||||    
T  3565259 gttccataaacggagccagtactcata---acattcagtatcagcagaaccataaatgaaacga---------------taaccagtcaaacagatcaac 3565178  T
Q  402 ccattgcaggaaccagctatacgagagcagtctttttcattcaatagatagtgaggatcagcaacaagggtaaacggcgggttatctagtaaacgaggta 501  Q
    ||||||||| |||||||||||| ||||||||||||||||||||| | | ||||||||||||||||||  ||||| | ||||||||| |||||||||||||    
T  3565177 ccattgcagaaaccagctataccagagcagtctttttcattcaacatagagtgaggatcagcaacaaccgtaaatgacgggttatcgagtaaacgaggta 3565078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 1686543 - 1686788
Alignment:
Q  20 agtgattgggatgtcattgtgaatggccaaccagttaagagtgccattaagaaacacatcagtatgattaaattgttcaaaatccaaattaagaggaaca 119  Q
    ||||||||||| |||||| ||||  |||||||| |||||||||||||||||||||||||||| ||  | | | | |  ||||| || |   ||||||| |    
T  1686543 agtgattgggacgtcattttgaacagccaaccaattaagagtgccattaagaaacacatcagcatactcagagtctcgaaaattcacacggagaggaata 1686642  T
Q  120 acaaggaaactttcaatatttctccaaacattattacctaaactgaaaactcttacctcacttgtcaaaggattatcatcaatgtaacgtgacgcaacca 219  Q
    ||  |||||||||||||||||||||||||||||| |||||||||||||||||| |  | || |||||||   | ||||  | | |||| |||||||||||    
T  1686643 accgggaaactttcaatatttctccaaacattatcacctaaactgaaaactctcatataacatgtcaaa---taatcacgactttaacatgacgcaacca 1686739  T
Q  220 ctttaaaagttccagtggaattatcacaaccaaaattgaagacgaaacc 268  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  1686740 ctttaaaagtgccagtggaattatcacaaccaaaattgaagatgaaacc 1686788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 110 - 253
Target Start/End: Original strand, 3561306 - 3561446
Alignment:
Q  110 aagaggaacaacaaggaaactttcaatatttctccaaacattattacctaaactgaaaactcttacctcacttgtcaaaggattatcatcaatgtaacgt 209  Q
    ||||||||||| | | |||||||||||||||||||||||||||| ||| |||| |||| |||| ||||| || |||||    | ||||  |||||||| |    
T  3561306 aagaggaacaataggaaaactttcaatatttctccaaacattatcaccaaaaccgaaagctctcacctcgctagtcaa---ttgatcacgaatgtaacat 3561402  T
Q  210 gacgcaaccactttaaaagttccagtggaattatcacaaccaaa 253  Q
    ||||||||||||||| || | ||||| |||||||||||||||||    
T  3561403 gacgcaaccactttataaatgccagttgaattatcacaaccaaa 3561446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 435 - 503
Target Start/End: Original strand, 3573289 - 3573357
Alignment:
Q  435 ttttcattcaatagatagtgaggatcagcaacaagggtaaacggcgggttatctagtaaacgaggtata 503  Q
    |||| |||||||||| |||||| |||||| |||||||||||||  |||||||| |||||||||| ||||    
T  3573289 ttttgattcaatagagagtgagaatcagcgacaagggtaaacgaagggttatcaagtaaacgagatata 3573357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 495
Target Start/End: Original strand, 1686949 - 1687003
Alignment:
Q  441 ttcaatagatagtgaggatcagcaacaagggtaaacggcgggttatctagtaaac 495  Q
    ||||||||| |||||||||||||||||||||||| || | ||||||| |||||||    
T  1686949 ttcaatagagagtgaggatcagcaacaagggtaatcgacaggttatcgagtaaac 1687003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 289 - 322
Target Start/End: Original strand, 3561512 - 3561545
Alignment:
Q  289 tcctagtggctgggttccataaacggagccagta 322  Q
    ||||||||||||||||||||||||||||||||||    
T  3561512 tcctagtggctgggttccataaacggagccagta 3561545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 11849195 - 11849247
Alignment:
Q  270 ccaatttttggagatatattcctagtggctgggttccataaacggagccagta 322  Q
    |||| |||||||||| |  |||| |||||||||||||||||||||||||||||    
T  11849195 ccaaattttggagatgttgtcctggtggctgggttccataaacggagccagta 11849247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 315
Target Start/End: Original strand, 1686808 - 1686853
Alignment:
Q  270 ccaatttttggagatatattcctagtggctgggttccataaacgga 315  Q
    |||||| || ||||||| ||||||||||| ||||||||||||||||    
T  1686808 ccaattatttgagatattttcctagtggccgggttccataaacgga 1686853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 11971329 - 11971365
Alignment:
Q  139 ttctccaaacattattacctaaactgaaaactcttac 175  Q
    |||||||||||||||| |||| |||||||||||||||    
T  11971329 ttctccaaacattattgcctatactgaaaactcttac 11971365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 8e-50; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 39 - 262
Target Start/End: Original strand, 39379338 - 39379564
Alignment:
Q  39 tgaatggccaaccagttaagagtgccattaagaaacacatcagtatgattaaattgttcaaaatccaaattaagaggaacaacaaggaaactttcaatat 138  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| |||  ||| ||||||||||||  |||||||||||||||    
T  39379338 tgaatagccaaccaattaagagtgccattaagaaacacaccagtatgatgaaattgttcaacatcacaataaagaggaacaaccgggaaactttcaatat 39379437  T
Q  139 ttctccaaacattattacctaaactgaaaactcttacctcacttgtcaaaggat---tatcatcaatgtaacgtgacgcaaccactttaaaagttccagt 235  Q
    ||||||||||||||| ||| |||||||||||||| || ||  |||||||    |      |  ||| |||||||||||||||||||||||||||| ||||    
T  39379438 ttctccaaacattatcacccaaactgaaaactctcacatcggttgtcaattcttcgccgacgccaaggtaacgtgacgcaaccactttaaaagtttcagt 39379537  T
Q  236 ggaattatcacaaccaaaattgaagac 262  Q
    |||||||||||||||||||| ||||||    
T  39379538 ggaattatcacaaccaaaatcgaagac 39379564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 442 - 503
Target Start/End: Original strand, 39379744 - 39379805
Alignment:
Q  442 tcaatagatagtgaggatcagcaacaagggtaaacggcgggttatctagtaaacgaggtata 503  Q
    |||||||| |||||||||||||||||||||||||||  |||||||| |||| ||||||||||    
T  39379744 tcaatagaaagtgaggatcagcaacaagggtaaacgaagggttatcgagtatacgaggtata 39379805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 39379589 - 39379649
Alignment:
Q  269 accaatttttggagatatattcctagtggctgggttccataaacggagccagtagtcataa 329  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||| |||||| ||||||    
T  39379589 accaattttttgagatgttttcctagtggctgggttccataaacggaaccagtactcataa 39379649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 17561086 - 17561152
Alignment:
Q  102 tccaaattaagaggaacaacaaggaaactttcaatatttctccaaacattattacctaaactgaaaa 168  Q
    ||||||| ||||||||||||  ||||||||| ||||| ||||||||| |||| ||| ||||| ||||    
T  17561086 tccaaatcaagaggaacaaccgggaaactttgaatatctctccaaacgttatcacccaaacttaaaa 17561152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 4366821 - 4366877
Alignment:
Q  97 caaaatccaaattaagaggaacaacaaggaaactttcaatatttctccaaacattat 153  Q
    |||| ||||||| ||||||||||| | | ||||||||||||| ||||||||| ||||    
T  4366821 caaagtccaaatgaagaggaacaataggaaaactttcaatatctctccaaacgttat 4366877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 322
Target Start/End: Original strand, 17561318 - 17561346
Alignment:
Q  294 gtggctgggttccataaacggagccagta 322  Q
    |||||||||||||||||||||||||||||    
T  17561318 gtggctgggttccataaacggagccagta 17561346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000005; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 29431340 - 29431383
Alignment:
Q  110 aagaggaacaacaaggaaactttcaatatttctccaaacattat 153  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||    
T  29431340 aagaggaacaacagggaaactttcaatatctctccaaacattat 29431383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 29454437 - 29454488
Alignment:
Q  102 tccaaattaagaggaacaacaaggaaactttcaatatttctccaaacattat 153  Q
    ||||||| ||||||| ||||| ||||||||||||||| ||||||||||||||    
T  29454437 tccaaatgaagaggagcaacagggaaactttcaatatctctccaaacattat 29454488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 29899099 - 29899044
Alignment:
Q  110 aagaggaacaacaaggaaactttcaatatttctccaaacattattacctaaactga 165  Q
    ||||||||||||  ||||||||||||||| |||||||||||||| ||| |||||||    
T  29899099 aagaggaacaactgggaaactttcaatatctctccaaacattatcaccaaaactga 29899044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 29074608 - 29074556
Alignment:
Q  270 ccaatttttggagatatattcctagtggctgggttccataaacggagccagta 322  Q
    |||| |||||||||| |  |||| |||||||||||||||||||||||||||||    
T  29074608 ccaaattttggagatgttgtcctggtggctgggttccataaacggagccagta 29074556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 29106343 - 29106291
Alignment:
Q  270 ccaatttttggagatatattcctagtggctgggttccataaacggagccagta 322  Q
    |||| |||||||||| |  |||| |||||||||||||||||||||||||||||    
T  29106343 ccaaattttggagatgttgtcctggtggctgggttccataaacggagccagta 29106291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 416
Target Start/End: Complemental strand, 29858883 - 29858852
Alignment:
Q  385 cagtcaaacaaatcaacccattgcaggaacca 416  Q
    ||||||||||||||||||||||||||||||||    
T  29858883 cagtcaaacaaatcaacccattgcaggaacca 29858852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 22080581 - 22080540
Alignment:
Q  134 aatatttctccaaacattattacctaaactgaaaactcttac 175  Q
    ||||| |||||||||||| || ||||||||||||||||||||    
T  22080581 aatatctctccaaacattgttgcctaaactgaaaactcttac 22080540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 18983319 - 18983371
Alignment:
Q  126 aaactttcaatatttctccaaacattattacctaaactgaaaactcttacctc 178  Q
    ||||||| ||||| ||||||||||||||  |||||| |||||||||| |||||    
T  18983319 aaactttgaatatgtctccaaacattatcgcctaaattgaaaactctcacctc 18983371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 18997965 - 18998017
Alignment:
Q  126 aaactttcaatatttctccaaacattattacctaaactgaaaactcttacctc 178  Q
    ||||||| ||||| ||||||||||||||  |||||| |||||||||| |||||    
T  18997965 aaactttgaatatgtctccaaacattatcgcctaaattgaaaactctcacctc 18998017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 19637584 - 19637636
Alignment:
Q  126 aaactttcaatatttctccaaacattattacctaaactgaaaactcttacctc 178  Q
    ||||||| ||||||||||||||| |||| ||| ||||| |||||||| |||||    
T  19637584 aaactttgaatatttctccaaactttatcaccaaaactaaaaactctcacctc 19637636  T

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Target: chr3 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 3625469 - 3625423
Alignment:
Q  124 ggaaactttcaatatttctccaaacattattacctaaactgaaaact 170  Q
    |||||||||||||||||||||||||||||| ||| ||||||| ||||    
T  3625469 ggaaactttcaatatttctccaaacattatcaccaaaactgagaact 3625423  T

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Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 428
Target Start/End: Complemental strand, 3625226 - 3625181
Alignment:
Q  383 accagtcaaacaaatcaacccattgcaggaaccagctatacgagag 428  Q
    ||||| |||||| ||||| ||||||||||||||| |||||||||||    
T  3625226 accagccaaacatatcaatccattgcaggaaccaactatacgagag 3625181  T

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