View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19724_low_9 (Length: 348)

Name: NF19724_low_9
Description: NF19724
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19724_low_9
NF19724_low_9
[»] chr1 (38 HSPs)
chr1 (1-273)||(23231263-23231535)
chr1 (275-345)||(51065864-51065934)
chr1 (269-348)||(19011109-19011187)
chr1 (270-348)||(47532783-47532860)
chr1 (275-348)||(30294494-30294567)
chr1 (275-348)||(38335170-38335242)
chr1 (269-348)||(15227733-15227812)
chr1 (275-348)||(17333395-17333467)
chr1 (275-348)||(29657771-29657844)
chr1 (275-348)||(42770103-42770176)
chr1 (305-348)||(39497337-39497380)
chr1 (278-345)||(43286725-43286792)
chr1 (275-348)||(29683195-29683269)
chr1 (275-348)||(9266841-9266914)
chr1 (275-348)||(14350390-14350463)
chr1 (275-348)||(24178576-24178649)
chr1 (275-348)||(29210413-29210486)
chr1 (275-348)||(35985734-35985806)
chr1 (275-348)||(38162850-38162923)
chr1 (308-348)||(45449357-45449397)
chr1 (302-348)||(3784826-3784872)
chr1 (278-348)||(12072175-12072245)
chr1 (275-345)||(45431279-45431348)
chr1 (275-345)||(47009993-47010063)
chr1 (275-348)||(3097659-3097732)
chr1 (275-348)||(5694321-5694394)
chr1 (275-348)||(13961212-13961284)
chr1 (303-344)||(15282631-15282672)
chr1 (275-348)||(18043162-18043235)
chr1 (275-343)||(19031933-19032001)
chr1 (277-348)||(38702046-38702117)
chr1 (308-348)||(50128285-50128325)
chr1 (282-345)||(6770344-6770407)
chr1 (275-348)||(30657608-30657681)
chr1 (275-345)||(52749602-52749672)
chr1 (277-338)||(9414002-9414062)
chr1 (315-348)||(51368898-51368931)
chr1 (308-348)||(10976015-10976055)
[»] chr8 (33 HSPs)
chr8 (275-348)||(43119217-43119290)
chr8 (275-344)||(4648195-4648263)
chr8 (275-348)||(9063165-9063237)
chr8 (275-348)||(12652630-12652703)
chr8 (277-348)||(20831666-20831737)
chr8 (275-348)||(33357242-33357315)
chr8 (275-348)||(34228682-34228755)
chr8 (275-348)||(40831281-40831350)
chr8 (275-348)||(16394174-16394247)
chr8 (275-348)||(29235235-29235308)
chr8 (275-348)||(30675685-30675758)
chr8 (275-348)||(37373206-37373278)
chr8 (275-348)||(7304631-7304701)
chr8 (278-348)||(13643015-13643085)
chr8 (278-348)||(13743440-13743510)
chr8 (275-348)||(168466-168539)
chr8 (275-348)||(2805373-2805446)
chr8 (275-348)||(9278212-9278285)
chr8 (275-348)||(11112639-11112712)
chr8 (275-348)||(27988612-27988685)
chr8 (275-348)||(28045914-28045987)
chr8 (275-348)||(32113908-32113981)
chr8 (276-348)||(16888657-16888728)
chr8 (269-348)||(4537857-4537936)
chr8 (308-347)||(10618051-10618090)
chr8 (278-348)||(29444253-29444323)
chr8 (270-348)||(36730441-36730517)
chr8 (303-348)||(9537937-9537982)
chr8 (288-345)||(42035097-42035154)
chr8 (308-348)||(16890593-16890633)
chr8 (276-348)||(21595848-21595919)
chr8 (275-345)||(16785087-16785156)
chr8 (302-342)||(36923782-36923822)
[»] chr2 (25 HSPs)
chr2 (275-348)||(2898072-2898144)
chr2 (275-348)||(561631-561704)
chr2 (275-348)||(20552931-20553004)
chr2 (275-348)||(26891776-26891849)
chr2 (278-348)||(5881221-5881290)
chr2 (275-348)||(8969520-8969591)
chr2 (275-348)||(32360982-32361055)
chr2 (275-344)||(38296178-38296246)
chr2 (275-348)||(43637165-43637237)
chr2 (269-345)||(38590990-38591066)
chr2 (278-348)||(4381798-4381868)
chr2 (275-345)||(30486210-30486280)
chr2 (275-348)||(31438646-31438719)
chr2 (275-348)||(6580189-6580262)
chr2 (275-348)||(34442645-34442717)
chr2 (278-348)||(3668226-3668295)
chr2 (302-348)||(11021335-11021381)
chr2 (275-348)||(32860102-32860175)
chr2 (275-344)||(44587902-44587971)
chr2 (308-348)||(26387177-26387217)
chr2 (275-345)||(31390012-31390082)
chr2 (275-348)||(5093652-5093724)
chr2 (275-348)||(22887750-22887823)
chr2 (275-348)||(27856509-27856582)
chr2 (301-345)||(22567628-22567672)
[»] chr7 (27 HSPs)
chr7 (275-348)||(43594149-43594222)
chr7 (111-217)||(37111922-37112028)
chr7 (275-348)||(8754698-8754771)
chr7 (275-348)||(5239285-5239358)
chr7 (276-348)||(47656981-47657053)
chr7 (275-345)||(5729346-5729416)
chr7 (275-348)||(12218549-12218622)
chr7 (276-345)||(28587911-28587979)
chr7 (275-348)||(29993600-29993673)
chr7 (275-348)||(34333284-34333357)
chr7 (302-348)||(525188-525234)
chr7 (302-348)||(30810682-30810728)
chr7 (274-348)||(34606260-34606334)
chr7 (275-344)||(4628566-4628635)
chr7 (275-348)||(7689313-7689386)
chr7 (275-348)||(24438477-24438550)
chr7 (275-348)||(24798516-24798588)
chr7 (275-344)||(47839493-47839561)
chr7 (308-348)||(23357820-23357860)
chr7 (308-348)||(34546427-34546467)
chr7 (275-345)||(18485961-18486031)
chr7 (278-348)||(23363280-23363349)
chr7 (275-348)||(1736980-1737053)
chr7 (303-348)||(11686437-11686482)
chr7 (275-348)||(27456226-27456298)
chr7 (278-342)||(28262034-28262098)
chr7 (275-331)||(37674243-37674299)
[»] chr5 (20 HSPs)
chr5 (275-348)||(13661808-13661881)
chr5 (269-348)||(10069963-10070042)
chr5 (275-344)||(35132522-35132591)
chr5 (275-348)||(35504353-35504426)
chr5 (275-347)||(11958081-11958153)
chr5 (278-348)||(19647771-19647841)
chr5 (275-348)||(40564517-40564588)
chr5 (276-345)||(2619673-2619742)
chr5 (275-348)||(6283562-6283635)
chr5 (275-348)||(8787339-8787412)
chr5 (267-348)||(20175219-20175300)
chr5 (275-348)||(34650946-34651018)
chr5 (270-348)||(10054465-10054543)
chr5 (275-348)||(12506296-12506369)
chr5 (275-348)||(21547507-21547579)
chr5 (278-344)||(11846075-11846141)
chr5 (306-348)||(40057338-40057380)
chr5 (275-348)||(4837258-4837330)
chr5 (275-348)||(9721720-9721793)
chr5 (275-348)||(13470151-13470224)
[»] chr4 (35 HSPs)
chr4 (275-348)||(4089142-4089215)
chr4 (275-348)||(28755621-28755693)
chr4 (275-348)||(16536048-16536121)
chr4 (275-348)||(18067992-18068065)
chr4 (275-348)||(47231985-47232058)
chr4 (275-348)||(54897308-54897381)
chr4 (278-348)||(50619089-50619159)
chr4 (275-345)||(24679758-24679827)
chr4 (275-348)||(50167591-50167662)
chr4 (275-348)||(789643-789716)
chr4 (275-348)||(4268935-4269008)
chr4 (275-344)||(12356244-12356313)
chr4 (275-344)||(15186243-15186312)
chr4 (275-348)||(32202593-32202666)
chr4 (275-348)||(32217045-32217118)
chr4 (275-348)||(43944507-43944580)
chr4 (275-348)||(54054548-54054621)
chr4 (275-345)||(49915159-49915229)
chr4 (275-345)||(54655992-54656062)
chr4 (275-348)||(3783614-3783687)
chr4 (275-348)||(29591189-29591262)
chr4 (275-348)||(43202496-43202569)
chr4 (275-348)||(55882684-55882756)
chr4 (308-348)||(36395132-36395172)
chr4 (275-347)||(52533899-52533971)
chr4 (275-345)||(7768938-7769008)
chr4 (276-344)||(19503222-19503289)
chr4 (311-345)||(30154279-30154313)
chr4 (302-348)||(42898859-42898905)
chr4 (308-345)||(4220228-4220265)
chr4 (311-348)||(33108786-33108823)
chr4 (320-348)||(6164138-6164166)
chr4 (308-348)||(39843940-39843980)
chr4 (275-347)||(41265459-41265531)
chr4 (308-344)||(52697085-52697121)
[»] chr3 (33 HSPs)
chr3 (275-348)||(272220-272293)
chr3 (275-348)||(18014672-18014745)
chr3 (275-348)||(48725271-48725344)
chr3 (275-348)||(2119431-2119504)
chr3 (275-348)||(10617397-10617469)
chr3 (275-348)||(11308323-11308396)
chr3 (275-348)||(39074419-39074492)
chr3 (275-348)||(46352634-46352707)
chr3 (275-348)||(49893331-49893404)
chr3 (275-348)||(52520681-52520754)
chr3 (281-348)||(50395675-50395742)
chr3 (275-348)||(40362693-40362766)
chr3 (275-348)||(43786871-43786944)
chr3 (303-347)||(2938154-2938198)
chr3 (303-347)||(50299059-50299103)
chr3 (302-348)||(41554053-41554099)
chr3 (302-348)||(42548122-42548168)
chr3 (275-348)||(858589-858662)
chr3 (275-348)||(2505350-2505422)
chr3 (275-348)||(41304005-41304078)
chr3 (275-345)||(4168183-4168253)
chr3 (301-348)||(7468437-7468484)
chr3 (302-348)||(49529379-49529428)
chr3 (301-344)||(52718193-52718236)
chr3 (302-348)||(2391634-2391680)
chr3 (302-348)||(2393395-2393441)
chr3 (275-344)||(20923992-20924061)
chr3 (302-348)||(53489937-53489983)
chr3 (275-348)||(28139309-28139382)
chr3 (275-348)||(52246582-52246655)
chr3 (308-344)||(13159930-13159966)
chr3 (308-348)||(29241670-29241710)
chr3 (313-345)||(31514829-31514861)
[»] scaffold0190 (1 HSPs)
scaffold0190 (275-347)||(14896-14968)
[»] scaffold0021 (1 HSPs)
scaffold0021 (278-348)||(116207-116277)
[»] chr6 (26 HSPs)
chr6 (275-345)||(23629692-23629761)
chr6 (275-348)||(392096-392169)
chr6 (275-348)||(1391291-1391363)
chr6 (275-348)||(7851272-7851345)
chr6 (275-348)||(20897948-20898021)
chr6 (275-348)||(27433492-27433565)
chr6 (275-348)||(34396640-34396713)
chr6 (279-348)||(34851962-34852030)
chr6 (277-345)||(2350654-2350722)
chr6 (275-348)||(3515766-3515839)
chr6 (275-348)||(12145230-12145303)
chr6 (275-348)||(21878460-21878533)
chr6 (275-344)||(35043890-35043959)
chr6 (302-348)||(18276728-18276774)
chr6 (302-348)||(34477663-34477709)
chr6 (275-348)||(23402138-23402211)
chr6 (308-348)||(26467237-26467277)
chr6 (308-348)||(29451228-29451268)
chr6 (275-348)||(31280321-31280394)
chr6 (275-348)||(3026122-3026193)
chr6 (302-348)||(13529482-13529528)
chr6 (275-345)||(29978233-29978302)
chr6 (303-348)||(2580980-2581025)
chr6 (275-348)||(4215695-4215768)
chr6 (275-344)||(12525719-12525788)
chr6 (275-348)||(32929621-32929694)
[»] scaffold0264 (1 HSPs)
scaffold0264 (275-344)||(22961-23030)
[»] scaffold0003 (1 HSPs)
scaffold0003 (275-348)||(53798-53871)
[»] scaffold0188 (1 HSPs)
scaffold0188 (276-348)||(6223-6295)
[»] scaffold0014 (1 HSPs)
scaffold0014 (268-348)||(68403-68483)
[»] scaffold0524 (1 HSPs)
scaffold0524 (269-348)||(819-898)
[»] scaffold0206 (1 HSPs)
scaffold0206 (275-348)||(11083-11154)
[»] scaffold0045 (2 HSPs)
scaffold0045 (275-345)||(50548-50618)
scaffold0045 (301-348)||(53459-53506)
[»] scaffold1152 (1 HSPs)
scaffold1152 (275-344)||(678-747)
[»] scaffold0015 (1 HSPs)
scaffold0015 (275-338)||(74597-74659)
[»] scaffold0674 (1 HSPs)
scaffold0674 (302-348)||(8010-8056)
[»] scaffold0549 (1 HSPs)
scaffold0549 (302-348)||(7315-7361)
[»] scaffold1266 (1 HSPs)
scaffold1266 (275-348)||(293-365)
[»] scaffold0325 (1 HSPs)
scaffold0325 (275-348)||(17583-17654)
[»] scaffold0050 (1 HSPs)
scaffold0050 (308-344)||(69259-69295)
[»] scaffold0002 (1 HSPs)
scaffold0002 (308-344)||(147022-147058)


Alignment Details
Target: chr1 (Bit Score: 245; Significance: 1e-136; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 23231535 - 23231263
Alignment:
Q  1 aaggtgttggtctgtttgaagaagacccattttggttagaagattggtgaagtagttgttgtcgaatgtgtcttgagttgatgggtctaagttgttcaaa 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23231535 aaggtgttgatctgtttgaagaagacccattttggttagaagattggtgaagtagttgttgtcgaatgtgtcttgagttgatgggtctaagttgttcaaa 23231436  T
Q  101 gtagaaccgtttccattttggggacaattttgttgaagtgttgctaaataggttgtgtttagggttgggtctgggtttccagtgccactgaagttgaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  23231435 gtagaaccgtttccattttggggacaattttgttgaagtgttgctaaataggttgtgtttagggttgggtctgggtttccagtgccattgaagttgaaca 23231336  T
Q  201 gtctttgggagaaaaattggcattgagcacgtccaattgtgtgtgcacctacaaattacatacgtttcaatta 273  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||| |||||||||    
T  23231335 gtctttgggagaaaaattggcattgagcacgtccaaatgtgtgagcacctacaaattccatacatttcaatta 23231263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 51065934 - 51065864
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    |||||||||||||||||||||| || |||||| |||| |||||||||||| ||||||||||||||||||||    
T  51065934 gggaaatgctaaccggtgtccccgggacactggttaaggatatgaaaaagtaaattatatagtagttaatg 51065864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 19011187 - 19011109
Alignment:
Q  269 aattaggggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||| ||||||||||||||||||||||||  ||| | |||| |||||||||||| |||||||||||||||||||||||    
T  19011187 aattagaggaaatgctaaccggtgtcccgggg-cacgggttaaggatatgaaaaaggaaattatatagtagttaatgcat 19011109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 47532860 - 47532783
Alignment:
Q  270 attaggggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||| |||||||||||||||||||| | |||  |||| |||| ||||||||||||||||||||||||||||||||||||    
T  47532860 attaagggaaatgctaaccggtgtctccggagtactg-ttaaggatatgaaaaagaaaattatatagtagttaatgcat 47532783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 30294567 - 30294494
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||| ||||||||| ||| || || |||| |||||||||||| |||||||||||||||||||||||    
T  30294567 gggaaatgctaatcggtgtccccggagcattggttaaggatatgaaaaaggaaattatatagtagttaatgcat 30294494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 38335170 - 38335242
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||||||||  |||| ||||| ||||||||||||||||| ||||||||||||| |||||||||    
T  38335170 gggaaatgctaaccggtgtcttggga-cactggttaaagatatgaaaaaggaaattatatagtaattaatgcat 38335242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 15227733 - 15227812
Alignment:
Q  269 aattaggggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| |||||||||||||||||  ||||||  ||||| |||| |||||||||||| ||||||||||||| |||||||||    
T  15227733 aattaagggaaatgctaaccggtaccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcat 15227812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 17333467 - 17333395
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  17333467 gggaaatgctaaccggtgcccccggg-cactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 17333395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 29657771 - 29657844
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| ||||| |||||| |||||||||||||||||||||||    
T  29657771 gggaaatgctaaccggtgcccccggggcactggttaaggatataaaaaaggaaattatatagtagttaatgcat 29657844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 42770176 - 42770103
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| | |||||||||| |||||||||||||||||||||||    
T  42770176 gggaaatgctaaccggtgcccccggggcactggttaatggtatgaaaaaggaaattatatagtagttaatgcat 42770103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 305 - 348
Target Start/End: Original strand, 39497337 - 39497380
Alignment:
Q  305 tgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  39497337 tgattaaggatatgaaaaagaaaattatatagtagttaatgcat 39497380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 345
Target Start/End: Original strand, 43286725 - 43286792
Alignment:
Q  278 aaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    |||||||||||| |||||| || |||||| |||| |||||||||||| |||||||||| |||||||||    
T  43286725 aaatgctaaccgatgtccctgggacactggttaaggatatgaaaaaggaaattatataatagttaatg 43286792  T

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Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 29683195 - 29683269
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaa-gaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||||||||| ||||| | |||||||||||||||||||||||    
T  29683195 gggaaatgctaaccggtgcccccggggcactggttaaagatataaaaaaaggaaattatatagtagttaatgcat 29683269  T

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Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 9266914 - 9266841
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||| ||||||||||||| |   ||||| |||| |||||||||||| ||||||||||||| |||||||||    
T  9266914 gggaaatgttaaccggtgtccccgcggcactggttaaggatatgaaaaaggaaattatatagtatttaatgcat 9266841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 14350463 - 14350390
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||| ||| | |||| | |||||||||| ||||||||| |||||||||||||    
T  14350463 gggaaatgctaaccggtgcccccggagcaccggttaagggtatgaaaaaggaaattatattgtagttaatgcat 14350390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 24178649 - 24178576
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||| || ||| ||  ||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  24178649 gggaaatgctaaccgatgcccccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcat 24178576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 29210413 - 29210486
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| | | ||  ||||| |||| | |||||||||| |||||||||||||||||||||||    
T  29210413 gggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 29210486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 35985806 - 35985734
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||| ||||||||| ||||| | ||||| |||| ||||| |||||| |||||||||||||||||||||||    
T  35985806 gggaaatgttaaccggtgccccgg-atcactgtttaaggatataaaaaaggaaattatatagtagttaatgcat 35985734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 38162850 - 38162923
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||| ||||||||| | | ||  ||||| |||| | ||||||||||||||||||||||||||||||||||    
T  38162850 gggaaatgttaaccggtgcctccggggcactggttaagggtatgaaaaagaaaattatatagtagttaatgcat 38162923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 45449397 - 45449357
Alignment:
Q  308 ttaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  45449397 ttaaagatataaaaaagaaaattatatagtagttaatgcat 45449357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 3784872 - 3784826
Alignment:
Q  302 cactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  3784872 cactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 3784826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 12072245 - 12072175
Alignment:
Q  278 aaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||| ||| ||  ||| | |||| |||||||||||| ||||||| |||||||||||||||    
T  12072245 aaatgctaaccggtgcccccggggcaccggttaaggatatgaaaaaggaaattatgtagtagttaatgcat 12072175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 45431279 - 45431348
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    |||||||||||||||||| |||  |  | |||||||| |||||||||||| ||||||||||||||||||||    
T  45431279 gggaaatgctaaccggtgcccccagggc-ctgattaaggatatgaaaaaggaaattatatagtagttaatg 45431348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 47009993 - 47010063
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    |||||||||||| |||||   | ||| ||||| |||| |||||||||||| ||||||||||||||||||||    
T  47009993 gggaaatgctaatcggtgcatccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatg 47010063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 3097659 - 3097732
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||  |||| ||| |||   ||| |||| |||||||||||| |||||||||||||||||||||||    
T  3097659 gggaaatgctaattggtgcccccggagtcctggttaaggatatgaaaaaggaaattatatagtagttaatgcat 3097732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 5694321 - 5694394
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| | | ||  ||||| |||| ||||| |||| | |||||||||||||||||||||||    
T  5694321 gggaaatgctaaccggtgcctccggggcactggttaaggatataaaaagggaaattatatagtagttaatgcat 5694394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 13961212 - 13961284
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||| | |||| ||||| ||||| ||||||||||||||||||||||||    
T  13961212 gggaaatgctaaccggtgcccccggggcacgggttaaggatataaaaaa-aaaattatatagtagttaatgcat 13961284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 344
Target Start/End: Complemental strand, 15282672 - 15282631
Alignment:
Q  303 actgattaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    |||| |||| ||||||||||||||||||||||||||||||||    
T  15282672 actggttaaggatatgaaaaagaaaattatatagtagttaat 15282631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 18043162 - 18043235
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| | | ||  ||||| |||| | ||| |||||| |||||||||||||||||||||||    
T  18043162 gggaaatgctaaccggtgcctccggggcactggttaagggtataaaaaaggaaattatatagtagttaatgcat 18043235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 19032001 - 19031933
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaa 343  Q
    ||||||||||||||||||  |||||  || |  |||| |||||||||||| ||||||||||||||||||    
T  19032001 gggaaatgctaaccggtgctccgggggcattagttaaggatatgaaaaaggaaattatatagtagttaa 19031933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 348
Target Start/End: Complemental strand, 38702117 - 38702046
Alignment:
Q  277 gaaatgctaaccggtg-tcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||| |||||||  ||||| |||| | |||||||||| ||| |||||||||||||||||||    
T  38702117 gaaatgctaaccggtgctcccgggg-cactggttaagggtatgaaaaaggaaactatatagtagttaatgcat 38702046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 50128325 - 50128285
Alignment:
Q  308 ttaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||| ||||||||||||||||||| ||||||||||||||||    
T  50128325 ttaaggatatgaaaaagaaaattacatagtagttaatgcat 50128285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 6770344 - 6770407
Alignment:
Q  282 gctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    ||||||||||| | | ||  |||| ||||| |||||||||||| ||||||||||||||||||||    
T  6770344 gctaaccggtgcctccggggcactaattaaggatatgaaaaaggaaattatatagtagttaatg 6770407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 30657608 - 30657681
Alignment:
Q  275 gggaaatgctaaccggtg-tcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| |||||||  ||||  ||||  ||||||||||  |||||||||||||||||||||||    
T  30657608 gggaaatgctaaccggtgctcccgggg-cactagttaagcatatgaaaaaagaaattatatagtagttaatgcat 30657681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 52749602 - 52749672
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    ||||||||||||||| | |||  ||  || || ||||||||||||||||| |||||||||| |||||||||    
T  52749602 gggaaatgctaaccgatatccgcggggcattggttaaagatatgaaaaaggaaattatataatagttaatg 52749672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 338
Target Start/End: Complemental strand, 9414062 - 9414002
Alignment:
Q  277 gaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagta 338  Q
    |||||||||||||||| ||||||  || || |||||||||| ||||||||||||||| ||||    
T  9414062 gaaatgctaaccggtgccccgggg-cattggttaaagatattaaaaagaaaattatacagta 9414002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 348
Target Start/End: Complemental strand, 51368931 - 51368898
Alignment:
Q  315 tatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||| |||||||||||||||||||||||    
T  51368931 tatgaaaaaggaaattatatagtagttaatgcat 51368898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 10976055 - 10976015
Alignment:
Q  308 ttaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||| |||||||||||| | |||||||||||||||||||||    
T  10976055 ttaaggatatgaaaaaggagattatatagtagttaatgcat 10976015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 6e-22; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 43119217 - 43119290
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||  ||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  43119217 gggaaatgctaaccggtgccctcggggcactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 43119290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 4648195 - 4648263
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    |||||||||||||||||||||||||  |||||||||| |||||||||||| |||||||||||||||||||    
T  4648195 gggaaatgctaaccggtgtcccgggg-cactgattaaggatatgaaaaaggaaattatatagtagttaat 4648263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 9063237 - 9063165
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||||||||| | ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  9063237 gggaaatgctaaccggtgtcccgg-agcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 9063165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 12652630 - 12652703
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||| ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  12652630 gggaaatgctaaccggtgcccctggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 12652703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 277 - 348
Target Start/End: Complemental strand, 20831737 - 20831666
Alignment:
Q  277 gaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||| ||| || |||||| |||| |||||||||||| |||||||||||||||||||||||    
T  20831737 gaaatgctaaccggtgcccccgggacactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 20831666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 33357315 - 33357242
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||| |||| ||| ||| ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  33357315 gggaaatgctaactggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 33357242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 34228682 - 34228755
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||||||  ||||| |||| |||||||||||| ||||||||||||| |||||||||    
T  34228682 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcat 34228755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 40831281 - 40831350
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||| ||| |||||   ||||| |||||||||||||||||||||||||||||||||||||||||    
T  40831281 gggaaatgctaaccagtg-cccgg---cactggttaaagatatgaaaaagaaaattatatagtagttaatgcat 40831350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 16394247 - 16394174
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| ||| ||||||||||||||||||| ||||||||||||    
T  16394247 gggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaagaaaattatataatagttaatgcat 16394174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 29235235 - 29235308
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||||||| || ||| || ||||||| ||||| |||||  |||||||||||||||||||||||    
T  29235235 gggaaatgctaaccggtgttcccggagcattgattaaggatataaaaaaagaaattatatagtagttaatgcat 29235308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 30675758 - 30675685
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| | |||||||||| |||||||||||||||||||||||    
T  30675758 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 30675685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 37373206 - 37373278
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||| ||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  37373206 gggaaatgctaaccggtgcccccgga-cactggttaaggatatgaaaaaggaaattatataatagttaatgcat 37373278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 7304701 - 7304631
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||| ||||||||||||| |  |||||   ||| ||||||||||||||||||||||||||||||||||||    
T  7304701 gggaaatgttaaccggtgtccctgagacact---taaggatatgaaaaagaaaattatatagtagttaatgcat 7304631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 13643015 - 13643085
Alignment:
Q  278 aaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||| ||| ||  ||||| |||| |||| ||||||| |||||||||||||||||||||||    
T  13643015 aaatgctaaccggtgcccccggggcactggttaaggatacgaaaaaggaaattatatagtagttaatgcat 13643085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 13743440 - 13743510
Alignment:
Q  278 aaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||| ||| ||  ||||| |||| |||| ||||||| |||||||||||||||||||||||    
T  13743440 aaatgctaaccggtgcccccggggcactggttaaggatacgaaaaaggaaattatatagtagttaatgcat 13743510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 168466 - 168539
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| | | ||  ||||| |||| | |||||||||| |||||||||||||||||||||||    
T  168466 gggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 168539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 2805446 - 2805373
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||| ||||| ||| ||| || |||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  2805446 gggaaatgttaaccagtgcccccgggacactggttaaggatatgaaaaaggaaattatataatagttaatgcat 2805373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 9278212 - 9278285
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||| |||| | | || |||||  ||||||||||||||||| |||||||||| ||||||||||||    
T  9278212 gggaaatgctaactggtgcctcagggacactcgttaaagatatgaaaaaggaaattatataatagttaatgcat 9278285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 11112639 - 11112712
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||| ||||   | || |||||| |||| |||||||||||| |||||||||||||||||||||||    
T  11112639 gggaaatgctaactggtgcatccgggacactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 11112712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 27988685 - 27988612
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| | | ||  ||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  27988685 gggaaatgctaaccggtgcctccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcat 27988612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 28045987 - 28045914
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| | | ||  ||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  28045987 gggaaatgctaaccggtgcctccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcat 28045914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 32113908 - 32113981
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||| ||||||||||||||| | |||  | || |||| |||||||||||| |||||||||||||||||||||||    
T  32113908 gggagatgctaaccggtgtctccggagtattggttaaggatatgaaaaaggaaattatatagtagttaatgcat 32113981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 16888728 - 16888657
Alignment:
Q  276 ggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||||| ||| ||  ||| | |||| |||||||||||| |||||||||||||||||||||||    
T  16888728 ggaaatgctaaccggtgcccccggg-cacaggttaaggatatgaaaaaggaaattatatagtagttaatgcat 16888657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 4537936 - 4537857
Alignment:
Q  269 aattaggggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| |||||||||||||||||| | | ||  ||||| |||| ||||| ||| || |||||||||||||||||||||||    
T  4537936 aattaagggaaatgctaaccggtgcctccggggcactggttaaggatataaaataggaaattatatagtagttaatgcat 4537857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 347
Target Start/End: Original strand, 10618051 - 10618090
Alignment:
Q  308 ttaaagatatgaaaaagaaaattatatagtagttaatgca 347  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  10618051 ttaaggatatgaaaaagaaaattatatagtagttaatgca 10618090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 29444323 - 29444253
Alignment:
Q  278 aaatgctaaccggtg-tcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| ||||||||| |||||||  |||||||||| |||||||||||| |||||||||||||||||| ||||    
T  29444323 aaatgttaaccggtgctcccgggg-cactgattaaggatatgaaaaaggaaattatatagtagttaacgcat 29444253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 36730441 - 36730517
Alignment:
Q  270 attaggggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||| ||||||| |||| ||| ||| ||||  |||| |||||||||||| |||||||||||||||||||||||    
T  36730441 attaggggaa-tgctaactggtgccccagga-cactagttaaggatatgaaaaaggaaattatatagtagttaatgcat 36730517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 9537982 - 9537937
Alignment:
Q  303 actgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||    
T  9537982 actggttaaggatatgaaaaaggaaattatatagtagttaatgcat 9537937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 345
Target Start/End: Complemental strand, 42035154 - 42035097
Alignment:
Q  288 cggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    ||||| ||| ||| ||||| |||| |||||||||||| ||||||||||||||||||||    
T  42035154 cggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatg 42035097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 16890633 - 16890593
Alignment:
Q  308 ttaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  16890633 ttaaggatatgaaaaaggaaattatatagtagttaatgcat 16890593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 21595848 - 21595919
Alignment:
Q  276 ggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||||| ||| ||  ||||| |||| | |||||||||| ||||||||||| |||||||||||    
T  21595848 ggaaatgctaaccggtgcccccggg-cactggttaagggtatgaaaaaggaaattatataggagttaatgcat 21595919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 16785087 - 16785156
Alignment:
Q  275 gggaaatgctaaccggtg-tcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    |||||||||||||||||| ||| |||  ||||| |||| |||||||||||  ||||||||||| ||||||||    
T  16785087 gggaaatgctaaccggtgctccaggg--cactggttaaggatatgaaaaaagaaattatatagcagttaatg 16785156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 342
Target Start/End: Complemental strand, 36923822 - 36923782
Alignment:
Q  302 cactgattaaagatatgaaaaagaaaattatatagtagtta 342  Q
    |||||||||| |||||||||||| |||||||||| ||||||    
T  36923822 cactgattaaggatatgaaaaaggaaattatataatagtta 36923782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 6e-22; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 2898072 - 2898144
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||| ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  2898072 gggaaatgttaaccggtgtcccgg-aacactggttaaggatatgaaaaagaaaattatatagtagttaatgcat 2898144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 561704 - 561631
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  561704 gggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 561631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 20552931 - 20553004
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||||||  ||||| |||| |||||||||||| ||||||||||||| |||||||||    
T  20552931 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcat 20553004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 26891849 - 26891776
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| || ||||||||||| ||||| |||||| |||||||||| ||||||||||||    
T  26891849 gggaaatgctaaccggtgcccccgggacactgattaaggatataaaaaaggaaattatatattagttaatgcat 26891776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 5881221 - 5881290
Alignment:
Q  278 aaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||||||||| | ||| | |||| |||||||||||| |||||||||||||||||||||||    
T  5881221 aaatgctaaccggtgtcccgg-agcacaggttaaggatatgaaaaaggaaattatatagtagttaatgcat 5881290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 8969591 - 8969520
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||| ||| ||||||  ||||  |||| ||||||||||||||||||||||||||||||||||||    
T  8969591 gggaaatgctaaccagtgccccggg--cactagttaaggatatgaaaaagaaaattatatagtagttaatgcat 8969520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 32361055 - 32360982
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| ||| ||||||||||||||||||| ||||||||||||    
T  32361055 gggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaagaaaattatataatagttaatgcat 32360982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 38296178 - 38296246
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    ||||||||||||||||||||  |||  ||||| ||||||||||||||||||||||||||||||| |||||    
T  38296178 gggaaatgctaaccggtgtcttgggg-cactggttaaagatatgaaaaagaaaattatatagtaattaat 38296246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 43637165 - 43637237
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| |||| || ||||| |||| |||||||| ||| |||||||||||||||||||||||    
T  43637165 gggaaatgctaaccggtgccccgaga-cactggttaaggatatgaataaggaaattatatagtagttaatgcat 43637237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 38591066 - 38590990
Alignment:
Q  269 aattaggggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    ||||| |||||||||||||||||||||| ||  ||||| ||||  ||||||||||| |||||||| |||||||||||    
T  38591066 aattaagggaaatgctaaccggtgtccctggggcactggttaagaatatgaaaaaggaaattatacagtagttaatg 38590990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 4381798 - 4381868
Alignment:
Q  278 aaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||| ||| ||  ||||| |||| | |||||||||| |||||||||||||||||||||||    
T  4381798 aaatgctaaccggtgcccccggtgcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 4381868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 30486210 - 30486280
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    ||||||||||||| |||| ||| ||  ||||| |||| |||||||||||| ||||||||||||||||||||    
T  30486210 gggaaatgctaactggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatg 30486280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 31438646 - 31438719
Alignment:
Q  275 gggaaatgctaaccggtg-tcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| |||||||  ||||| |||| |||||||||||| |||||||| ||||||||||||||    
T  31438646 gggaaatgctaaccggtgctcccggg-gcactggttaaggatatgaaaaaggaaattatacagtagttaatgcat 31438719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 6580189 - 6580262
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||| ||| ||||||  ||||| |||| | |||||||||| ||| |||||||||||||||||||    
T  6580189 gggaaatgctaaccagtgccccgggggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcat 6580262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 34442717 - 34442645
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||||||  |||   |||| |||||||||||||| |||||||||||||||||||||    
T  34442717 gggaaatgctaaccggtgccccgggg-cacatgttaaggatatgaaaaagaagattatatagtagttaatgcat 34442645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 3668295 - 3668226
Alignment:
Q  278 aaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||| ||| ||| ||||| |||| | |||| ||||| |||||||||||||||||||||||    
T  3668295 aaatgctaaccggtgcccccgga-cactggttaagggtatggaaaaggaaattatatagtagttaatgcat 3668226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 11021381 - 11021335
Alignment:
Q  302 cactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||||    
T  11021381 cactgattaaagatatgaaaaaagaaattatatggtagttaatgcat 11021335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 32860102 - 32860175
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||| ||||||||| ||||||  ||| | |||| ||||| |||||| ||||||||||||| |||||||||    
T  32860102 gggaaatgttaaccggtgccccgggggcacgggttaaggatataaaaaaggaaattatatagtatttaatgcat 32860175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 44587902 - 44587971
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    |||||||||||||||||| ||| ||  ||| | |||| ||||| |||||| |||||||||||||||||||    
T  44587902 gggaaatgctaaccggtgcccccggggcaccggttaaggatataaaaaaggaaattatatagtagttaat 44587971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 26387217 - 26387177
Alignment:
Q  308 ttaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  26387217 ttaaggatatgaaaaaggaaattatatagtagttaatgcat 26387177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 31390012 - 31390082
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    ||||||||||||| |||| | | ||  ||||  |||| |||||||||||| ||||||||||||||||||||    
T  31390012 gggaaatgctaactggtgcctccggggcactagttaaggatatgaaaaaggaaattatatagtagttaatg 31390082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 5093724 - 5093652
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||| ||| || ||| | ||||  |||| |||||||||||| |||||| ||||||||||||||||    
T  5093724 gggaaatgctaactggtttctcgg-agcactagttaaggatatgaaaaaggaaattaaatagtagttaatgcat 5093652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 22887750 - 22887823
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||| || | | ||  || || |||| |||||||||||  |||||||||||||||||||||||    
T  22887750 gggaaatgctaaccgatgcctccggggcagtggttaaggatatgaaaaaagaaattatatagtagttaatgcat 22887823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 27856582 - 27856509
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||| ||||||||| ||| ||  ||||| ||||   |||||||||| |||||||||| ||||||||||||    
T  27856582 gggaaatgttaaccggtgcccccggggcactggttaagagtatgaaaaaggaaattatataatagttaatgcat 27856509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 345
Target Start/End: Original strand, 22567628 - 22567672
Alignment:
Q  301 acactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    |||||| |||| |||||||||||  ||||||||||||||||||||    
T  22567628 acactggttaaggatatgaaaaaagaaattatatagtagttaatg 22567672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 43594222 - 43594149
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||||||| ||||||||| |||| ||||| |||||| |||||||||| ||||||||||||    
T  43594222 gggaaatgctaaccggtgtccccggaacactggttaaggatataaaaaaggaaattatataatagttaatgcat 43594149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 37112028 - 37111922
Alignment:
Q  111 ttccattttggggacaattttgttgaagtgttgctaaataggttgtgtttagggttgggtctgggtttccagtgccactgaagttgaatagtctttggga 210  Q
    |||||||||| |||||||||||||| || ||||||| ||| ||||  ||||| ||||| || || || || |||||||||||||||||||||||||||      
T  37112028 ttccattttgtggacaattttgttgtagagttgctagatatgttgaatttagtgttggatcaggcttgcctgtgccactgaagttgaatagtctttggtt 37111929  T
Q  211 gaaaaat 217  Q
    |||||||    
T  37111928 gaaaaat 37111922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 8754771 - 8754698
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| || |||| ||||| |||| |||||||||||  |||||||||||||||||||||||    
T  8754771 gggaaatgctaaccggtgccctgggagcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 8754698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 5239285 - 5239358
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| | | ||| ||||| |||| | |||||||||| |||||||||||||||||||||||    
T  5239285 gggaaatgctaaccggtgcctccggagcactggttaatggtatgaaaaaggaaattatatagtagttaatgcat 5239358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 47656981 - 47657053
Alignment:
Q  276 ggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||   ||||  ||||| |||| |||||||||||||||||||||||||| |||||||||    
T  47656981 ggaaatgctaaccggtgcttcgggggcactggttaaggatatgaaaaagaaaattatatagtaattaatgcat 47657053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 5729346 - 5729416
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    |||||||| |||||||||| || ||| ||||| |||| |||||||||||| |||||||||| |||||||||    
T  5729346 gggaaatgttaaccggtgttcccggagcactggttaaggatatgaaaaaggaaattatataatagttaatg 5729416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 12218622 - 12218549
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  |||||  |||  ||||||||||| |||||||||||||||||||||||    
T  12218622 gggaaatgctaaccggtgcccccggggcactggataagtatatgaaaaaggaaattatatagtagttaatgcat 12218549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 28587911 - 28587979
Alignment:
Q  276 ggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    ||||||||||||||||| ||| ||| ||||| |||| |||||||||||| ||||||||||||||| ||||    
T  28587911 ggaaatgctaaccggtgcccccgga-cactggttaaggatatgaaaaaggaaattatatagtagtcaatg 28587979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 29993673 - 29993600
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||| |||| ||| ||  ||| | |||| |||||||||||| |||||||||||||||||||||||    
T  29993673 gggaaatgctaacgggtgcccccggggcaccggttaaggatatgaaaaaggaaattatatagtagttaatgcat 29993600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 34333284 - 34333357
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| | |||||||||| ||||||||||||| |||||||||    
T  34333284 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtaattaatgcat 34333357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 525234 - 525188
Alignment:
Q  302 cactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  525234 cactggttaaagatatgaaaaagaaaagtatacagtagttaatgcat 525188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 30810682 - 30810728
Alignment:
Q  302 cactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  30810682 cactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 30810728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 348
Target Start/End: Original strand, 34606260 - 34606334
Alignment:
Q  274 ggggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||| |||| | | ||  ||||| |||| |||||||||||| ||||||||||||| |||||||||    
T  34606260 ggggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcat 34606334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 4628566 - 4628635
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    ||||||||||||||| || ||| ||  ||| | |||| |||||||||||| |||||||||||||||||||    
T  4628566 gggaaatgctaaccgatgcccctggggcaccggttaaggatatgaaaaaggaaattatatagtagttaat 4628635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 7689386 - 7689313
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||| ||||||||||| | || ||||||||||| ||||| |||||| ||||| || |||| |||||||||    
T  7689386 gggaaatgttaaccggtgtctctgggacactgattaaggatataaaaaaggaaattttacagtaattaatgcat 7689313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 24438477 - 24438550
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||  |||| | |||||||||| ||| |||||||||||||||||||    
T  24438477 gggaaatgctaaccggtgcccccggggcactagttaagggtatgaaaaaggaaactatatagtagttaatgcat 24438550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 24798588 - 24798516
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||  || | |||||||||||| |||||||||||||||||||||||    
T  24798588 gggaaatgctaaccggtgcccccggg-cacttgttgaggatatgaaaaaggaaattatatagtagttaatgcat 24798516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 47839493 - 47839561
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    |||||||||||||||||||||||||   |||| |||| |||||||||||| || ||||||| ||||||||    
T  47839493 gggaaatgctaaccggtgtcccggg-gtactggttaaggatatgaaaaaggaatttatataatagttaat 47839561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 23357860 - 23357820
Alignment:
Q  308 ttaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  23357860 ttaaggatatgaaaaagaaaattgtatagtagttaatgcat 23357820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 34546467 - 34546427
Alignment:
Q  308 ttaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  34546467 ttaaggatatgaaaaaggaaattatatagtagttaatgcat 34546427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 18485961 - 18486031
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    |||||||||||||||||| ||| ||  ||||| |||| |||||  ||||| ||||||||||||| ||||||    
T  18485961 gggaaatgctaaccggtgcccccggggcactggttaaggatattgaaaaggaaattatatagtaattaatg 18486031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 23363349 - 23363280
Alignment:
Q  278 aaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| ||||||||||||||| | ||||  |||| |||| ||||||| ||||| |||||||||||||||||    
T  23363349 aaatgttaaccggtgtcccgg-agcactcgttaaggataagaaaaaggaaattgtatagtagttaatgcat 23363280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 1736980 - 1737053
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||||||   | ||  ||||| |||| |||||||||||  |||||||||| ||||||||||||    
T  1736980 gggaaatgctaaccggtgcttctggggcactggttaaggatatgaaaaatgaaattatataatagttaatgcat 1737053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 11686482 - 11686437
Alignment:
Q  303 actgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||| |||| ||||| |||||| |||||||||||||||||||||||    
T  11686482 actggttaaggatataaaaaaggaaattatatagtagttaatgcat 11686437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 27456298 - 27456226
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||| |||| ||| ||  ||||| |||| |||||| ||||  |||||||||||||||||||||||    
T  27456298 gggaaatgctaactggtgcccccggg-cactggttaaggatatggaaaaagaaattatatagtagttaatgcat 27456226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 342
Target Start/End: Original strand, 28262034 - 28262098
Alignment:
Q  278 aaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagtta 342  Q
    ||||||||||||||| | | ||  ||| | |||| |||||||||||| |||||||||||||||||    
T  28262034 aaatgctaaccggtgcctccgggtcaccggttaaggatatgaaaaaggaaattatatagtagtta 28262098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 331
Target Start/End: Complemental strand, 37674299 - 37674243
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaatta 331  Q
    ||||||||||||||| || ||| |||  ||||||||| ||||| |||||||||||||    
T  37674299 gggaaatgctaaccgatgcccctggagtactgattaaggatataaaaaagaaaatta 37674243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 13661808 - 13661881
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||| ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  13661808 gggaaatgctaaccggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 13661881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 10069963 - 10070042
Alignment:
Q  269 aattaggggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| |||||||||||||||||| ||| ||  ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  10069963 aattatgggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 10070042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 35132522 - 35132591
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    |||||||||||||||||| ||| || |||||| |||| |||||||||||| |||||||||||||||||||    
T  35132522 gggaaatgctaaccggtgcccccgggacactggttaaggatatgaaaaaggaaattatatagtagttaat 35132591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 35504426 - 35504353
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| || |||||| |||| | |||||||||| |||||||||||||||||||||||    
T  35504426 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 35504353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 347
Target Start/End: Complemental strand, 11958153 - 11958081
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgca 347  Q
    |||||||||||||||||| ||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||||    
T  11958153 gggaaatgctaaccggtgcccccggggcacaggttaaagatataaaaaaggaaattatatagtagttaatgca 11958081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 19647841 - 19647771
Alignment:
Q  278 aaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||| || | ||  ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  19647841 aaatgctaaccggtatctccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 19647771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 40564588 - 40564517
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||||||||| ||  |||  |||||| ||| |||||||| |||||||||||||||||||||||    
T  40564588 gggaaatgctaaccggtgtccggg--acatcgattaaggatttgaaaaaggaaattatatagtagttaatgcat 40564517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 2619742 - 2619673
Alignment:
Q  276 ggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    |||||||||||| |||||| | || |||||  |||| |||||||||||||||||||| ||||||||||||    
T  2619742 ggaaatgctaactggtgtctccgggacacttgttaaggatatgaaaaagaaaattatttagtagttaatg 2619673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 6283562 - 6283635
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| | | ||  ||||  |||||||||||||||||||||||||||| || |||||||||    
T  6283562 gggaaatgctaaccggtgcctccggggcactagttaaagatatgaaaaagaaaattatataataattaatgcat 6283635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 8787339 - 8787412
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||||||| ||  || || |||| | |||||||||  |||||||||||||||||||||||    
T  8787339 gggaaatgctaaccggtgtccccggggcattggttaagggtatgaaaaatgaaattatatagtagttaatgcat 8787412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 348
Target Start/End: Original strand, 20175219 - 20175300
Alignment:
Q  267 tcaattaggggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||  ||||||||||||||||||| | |  |||||| ||||| |||| |||||  |||||||||||||||||||||||    
T  20175219 tcaattaatggaaatgctaaccggtgtctccgagacactggttaaaaatataaaaaaagaaattatatagtagttaatgcat 20175300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 34651018 - 34650946
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| | |||||||||| |||||||||||||||||||||||    
T  34651018 gggaaatgctaaccggtgcccccggg-cactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 34650946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 10054543 - 10054465
Alignment:
Q  270 attaggggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||| |||||||||||||||||| ||| ||  ||||| |||| | |||||||||| |||||||||| || |||||||||    
T  10054543 attaagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatataataattaatgcat 10054465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 12506296 - 12506369
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| | | ||| ||||  ||||   |||||||||| |||||||||||||||||||||||    
T  12506296 gggaaatgctaaccggtgcctctggagcactcgttaagagtatgaaaaaggaaattatatagtagttaatgcat 12506369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 21547579 - 21547507
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||||||| ||  ||  | |||| ||||| |||||| |||||||||||||||||||||||    
T  21547579 gggaaatgctaaccggtgtccccggg-catcggttaaggatataaaaaaggaaattatatagtagttaatgcat 21547507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 344
Target Start/End: Original strand, 11846075 - 11846141
Alignment:
Q  278 aaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    ||||||||| ||||||||| || |||||   ||| ||||| |||||| |||||||||||||||||||    
T  11846075 aaatgctaagcggtgtccccgggacactagctaaggatataaaaaaggaaattatatagtagttaat 11846141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 348
Target Start/End: Original strand, 40057338 - 40057380
Alignment:
Q  306 gattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  40057338 gattaaggatatgaaaaaggaaattatatagtagttagtgcat 40057380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 4837258 - 4837330
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||| ||||||||| ||||||  ||| | ||||  ||||||||||| ||||||||||||| |||||||||    
T  4837258 gggaaatgttaaccggtgccccgggg-caccggttaagaatatgaaaaaggaaattatatagtaattaatgcat 4837330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 9721793 - 9721720
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||| ||||||||||||  ||   |||| ||||  ||||||||||| ||||||||||||| |||||||||    
T  9721793 gggaaatgttaaccggtgtcctcgggctactggttaagaatatgaaaaaggaaattatatagtaattaatgcat 9721720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 13470151 - 13470224
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| |   ||  ||||| |||| |||||||||||| |||| |||||||||| |||||||    
T  13470151 gggaaatgctaaccggtgcctatggggcactggttaaggatatgaaaaaggaaataatatagtagtcaatgcat 13470224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 4089142 - 4089215
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  |||||||||| | ||||||||||||||||||||||||||||||||||    
T  4089142 gggaaatgctaaccggtgcccctggggcactgattaagggtatgaaaaagaaaattatatagtagttaatgcat 4089215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 28755621 - 28755693
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||||||| ||  ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  28755621 gggaaatgctaaccggtgtcccaggg-cactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 28755693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 16536048 - 16536121
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||| |||||| | |||||||||| |||||||||||||||||||||||    
T  16536048 gggaaatgctaaccggtgcccccggggcacggattaagggtatgaaaaaggaaattatatagtagttaatgcat 16536121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 18068065 - 18067992
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| | |||||||||| |||||||||||||||||||||||    
T  18068065 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 18067992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 47232058 - 47231985
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||| ||||| |||| ||| |||||||| |||||||||| ||||||||||||    
T  47232058 gggaaatgctaaccggtgcccccggagcactggttaaggatgtgaaaaaggaaattatataatagttaatgcat 47231985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 54897308 - 54897381
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| ||||||| |||| |||||||||||||||||||||||    
T  54897308 gggaaatgctaaccggtgcccccggggcactggttaaggatatgagaaaggaaattatatagtagttaatgcat 54897381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 50619089 - 50619159
Alignment:
Q  278 aaatgctaaccggtg-tcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||| |||| |||||||  ||||||||||  |||||||||||||||||||||||||||||||||||    
T  50619089 aaatgctaactggtgctcccgggg-cactgattaagaatatgaaaaagaaaattatatagtagttaatgcat 50619159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 24679827 - 24679758
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    |||||||||||||||||||| ||||  ||||| |||| |||||||||||  ||||||||||||||||||||    
T  24679827 gggaaatgctaaccggtgtctcgggg-cactggttaaggatatgaaaaaagaaattatatagtagttaatg 24679758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 50167591 - 50167662
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||||||| |  ||  ||||| ||||||||||||||||||||||  |||||||||||||||||    
T  50167591 gggaaatgctaaccggtgttctcggggcactggttaaagatatgaaaaagaaaat--tatagtagttaatgcat 50167662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 789716 - 789643
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||| | |||| | |||||||||| |||||||||||||||||||||||    
T  789716 gggaaatgctaaccggtgcccccggggcacgggttaagggtatgaaaaaggaaattatatagtagttaatgcat 789643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 4269008 - 4268935
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| | |||||||||| ||| |||||||||||||||||||    
T  4269008 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcat 4268935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 12356244 - 12356313
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    |||||||||||||||||| ||| |  | |||| |||| |||||||||||| |||||||||||||||||||    
T  12356244 gggaaatgctaaccggtgcccctgagatactggttaaggatatgaaaaaggaaattatatagtagttaat 12356313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 15186243 - 15186312
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    |||||||||||||||||| ||| ||  ||||| |||| | |||||||||| |||||||||||||||||||    
T  15186243 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaat 15186312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 32202666 - 32202593
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||| ||||||||||||| ||  ||| | |||| ||||| |||||| |||||||||||||||||||||||    
T  32202666 gggaaatgttaaccggtgtccccggggcacgggttaaggatataaaaaaggaaattatatagtagttaatgcat 32202593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 32217045 - 32217118
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||| |||| ||| ||  ||||| |||| ||||| |||||| |||||||||||||||||||||||    
T  32217045 gggaaatgctaactggtgcccccggggcactggttaaggatataaaaaaggaaattatatagtagttaatgcat 32217118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 43944507 - 43944580
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| | | ||  ||||| |||| | |||||||||| |||||||||||||||||||||||    
T  43944507 gggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 43944580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 54054548 - 54054621
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||||||  ||| | |||| |||||||||||  |||||||||| ||||||||||||    
T  54054548 gggaaatgctaaccggtgccccgggggcaccggttaaggatatgaaaaaagaaattatataatagttaatgcat 54054621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 49915159 - 49915229
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    ||||||||| |||||| | ||| ||  |||||||||| ||||||||||||||| |||||||||| ||||||    
T  49915159 gggaaatgcaaaccggcgcccctggtgcactgattaaggatatgaaaaagaaatttatatagtaattaatg 49915229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 54656062 - 54655992
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    |||||||| |||| ||||| |||||  ||||| |||| ||||| |||||| ||||||||||||||||||||    
T  54656062 gggaaatgttaactggtgttccgggggcactggttaaggatataaaaaaggaaattatatagtagttaatg 54655992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 3783687 - 3783614
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| | | ||  ||| | ||||| ||||||||||  |||||||||||||||||||||||    
T  3783687 gggaaatgctaaccggtgcctccggggcaccggttaaacatatgaaaaatgaaattatatagtagttaatgcat 3783614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 29591189 - 29591262
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||| |||| ||| ||  ||||| ||||  ||||||| ||| |||||||||||||||||||||||    
T  29591189 gggaaatgctaactggtgcccccggggcactggttaagaatatgaataaggaaattatatagtagttaatgcat 29591262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 43202569 - 43202496
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||  |||| | |||||||||| ||||||||||||| |||||||||    
T  43202569 gggaaatgctaaccggtgcccccggggcactagttaagggtatgaaaaaggaaattatatagtaattaatgcat 43202496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 55882684 - 55882756
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||||| | ||  ||||  |||| ||||||||||| |||||||||||||| |||||||||    
T  55882684 gggaaatgctaaccggtgtctccggggcactcgttaaggatatgaaaaa-aaaattatatagtaattaatgcat 55882756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 36395132 - 36395172
Alignment:
Q  308 ttaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  36395132 ttaaaaatatgaaaaaggaaattatatagtagttaatgcat 36395172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 347
Target Start/End: Complemental strand, 52533971 - 52533899
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgca 347  Q
    |||||||| ||||||||| | |  | |||||| ||||  ||||||||||| ||||||||||||||||||||||    
T  52533971 gggaaatgttaaccggtgcctccaggacactggttaagaatatgaaaaaggaaattatatagtagttaatgca 52533899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 7768938 - 7769008
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    |||||||||||| ||||  ||| ||  ||||| |||| | |||||||||| ||||||||||||||||||||    
T  7768938 gggaaatgctaatcggtacccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatg 7769008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 344
Target Start/End: Complemental strand, 19503289 - 19503222
Alignment:
Q  276 ggaaatgctaaccggtg-tcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    ||||||||||||||||| ||||||| ||  || |||| |||||||||||| |||||||||| ||||||||    
T  19503289 ggaaatgctaaccggtgctcccgggtac--tggttaaggatatgaaaaaggaaattatatactagttaat 19503222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 345
Target Start/End: Complemental strand, 30154313 - 30154279
Alignment:
Q  311 aagatatgaaaaagaaaattatatagtagttaatg 345  Q
    |||||||||||||| ||||||||||||||||||||    
T  30154313 aagatatgaaaaaggaaattatatagtagttaatg 30154279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 42898905 - 42898859
Alignment:
Q  302 cactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| |||| ||||| |||||| |||||||||||||||||||||||    
T  42898905 cactggttaaggatataaaaaaggaaattatatagtagttaatgcat 42898859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 345
Target Start/End: Original strand, 4220228 - 4220265
Alignment:
Q  308 ttaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  4220228 ttaaggatatgaaaaaggaaattatatagtagttaatg 4220265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 348
Target Start/End: Complemental strand, 33108823 - 33108786
Alignment:
Q  311 aagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  33108823 aagatatgaaaaaggaaattatataatagttaatgcat 33108786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 348
Target Start/End: Original strand, 6164138 - 6164166
Alignment:
Q  320 aaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||||||||||||||    
T  6164138 aaaagaaaattatatagtagttaatgcat 6164166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 39843940 - 39843980
Alignment:
Q  308 ttaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||| |||||||||||  |||||||||||||||||||||||    
T  39843940 ttaaggatatgaaaaatgaaattatatagtagttaatgcat 39843980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 347
Target Start/End: Original strand, 41265459 - 41265531
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgca 347  Q
    |||||||| ||| ||||||||| || |||||  ||||  |||  |||| ||||||||||||||||||||||||    
T  41265459 gggaaatgttaatcggtgtccccgggacactagttaagcatactaaaatgaaaattatatagtagttaatgca 41265531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 52697085 - 52697121
Alignment:
Q  308 ttaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  52697085 ttaaggatatgaaaaacaaaattatatagtagttaat 52697121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 272220 - 272293
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  272220 gggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 272293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 18014672 - 18014745
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||| |||| ||| ||  |||||||||| |||||||||||| |||||||||||||||||||||||    
T  18014672 gggaaatgctaactggtgcccccggggcactgattaaggatatgaaaaagtaaattatatagtagttaatgcat 18014745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 48725271 - 48725344
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||||||  ||||| |||| |||||||||||| ||||||||||||| |||||||||    
T  48725271 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcat 48725344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 2119431 - 2119504
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||| ||||||||||||  |   ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  2119431 gggaaatgttaaccggtgtcctcgaggcactggttaaagatatgaaaaaggaaattatatagtagttaatgcat 2119504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 10617469 - 10617397
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||| ||||||||| ||| ||| |||||||||| ||||| |||||| |||||||||||||||||||||||    
T  10617469 gggaaatgttaaccggtgcccccgga-cactgattaaggatataaaaaaggaaattatatagtagttaatgcat 10617397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 11308396 - 11308323
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||||  | || ||||||||||| ||| |||||||| |||||||||| ||||||||||||    
T  11308396 gggaaatgctaaccggtgtttccgggacactgattaaggatgtgaaaaaggaaattatataatagttaatgcat 11308323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 39074419 - 39074492
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| | |||||||||| |||||||||||||||||||||||    
T  39074419 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 39074492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 46352634 - 46352707
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| |||||||||||| |||||||| ||||||||||||||    
T  46352634 gggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatacagtagttaatgcat 46352707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 49893331 - 49893404
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  49893331 gggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcat 49893404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 52520681 - 52520754
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| | |||||||||| |||||||||||||||||||||||    
T  52520681 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 52520754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 348
Target Start/End: Complemental strand, 50395742 - 50395675
Alignment:
Q  281 tgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||| ||| || |||||| |||  ||||||||||||||||||||| ||||||||||||||    
T  50395742 tgctaaccggtgcccccgggacactggttagggatatgaaaaagaaaattatacagtagttaatgcat 50395675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 40362766 - 40362693
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||| ||| | | ||  |||||||||| |||||||||||  |||||||||||||||||||||||    
T  40362766 gggaaatgctaacccgtgcctccggggcactgattaaggatatgaaaaaagaaattatatagtagttaatgcat 40362693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 43786871 - 43786944
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| | | ||  ||||| |||| | |||||||||| |||||||||||||||||||||||    
T  43786871 gggaaatgctaaccggtgcctccggggcactggttaatggtatgaaaaaggaaattatatagtagttaatgcat 43786944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 2938198 - 2938154
Alignment:
Q  303 actgattaaagatatgaaaaagaaaattatatagtagttaatgca 347  Q
    |||| |||||||||| |||||||||||||||||||||||||||||    
T  2938198 actggttaaagatataaaaaagaaaattatatagtagttaatgca 2938154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 50299103 - 50299059
Alignment:
Q  303 actgattaaagatatgaaaaagaaaattatatagtagttaatgca 347  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||    
T  50299103 actgattaaagatataaaaaggaaaattatatagtagttaatgca 50299059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 41554099 - 41554053
Alignment:
Q  302 cactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  41554099 cactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 41554053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 42548122 - 42548168
Alignment:
Q  302 cactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||    
T  42548122 cactgcttaaagatatgaaaaaagaaattatatagtagttaatgcat 42548168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 858589 - 858662
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||| |||||||| |||  |  ||||  |||| |||||||||||| |||||||||||||||||||||||    
T  858589 gggaaatgcaaaccggtgcccccagtgcactagttaaggatatgaaaaaggaaattatatagtagttaatgcat 858662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 2505350 - 2505422
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||| ||  || ||| || || ||||||||||||||||| ||||||||||||||||| |||||    
T  2505350 gggaaatgctaaccgctgctcctgga-cattggttaaagatatgaaaaaggaaattatatagtagttagtgcat 2505422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 41304005 - 41304078
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| | | ||  || || |||| |||||||||||| ||||||||||||| |||||||||    
T  41304005 gggaaatgctaaccggtgcctccggggcagtggttaaggatatgaaaaaggaaattatatagtaattaatgcat 41304078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 4168183 - 4168253
Alignment:
Q  275 gggaaatgctaaccggtgtc-ccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    |||||||||||||||||| | ||||| | |||| |||| ||||| |||||| ||||||||||||||||||||    
T  4168183 gggaaatgctaaccggtgcctccgggga-actggttaaggatataaaaaaggaaattatatagtagttaatg 4168253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 7468437 - 7468484
Alignment:
Q  301 acactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||| |||| || ||||||||| |||||||||||||||||||||||    
T  7468437 acactggttaaggaaatgaaaaaggaaattatatagtagttaatgcat 7468484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 49529428 - 49529379
Alignment:
Q  302 cactgattaaagatatgaaaaagaaaattata---tagtagttaatgcat 348  Q
    |||||||||| |||||||||||||||||||||   |||||||||||||||    
T  49529428 cactgattaaggatatgaaaaagaaaattatatactagtagttaatgcat 49529379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 344
Target Start/End: Original strand, 52718193 - 52718236
Alignment:
Q  301 acactgattaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    |||||| |||| |||||||||||| |||||||||||||||||||    
T  52718193 acactggttaaggatatgaaaaaggaaattatatagtagttaat 52718236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 2391634 - 2391680
Alignment:
Q  302 cactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| |||| |||| ||||||| |||||||||||||||||||||||    
T  2391634 cactggttaaggataagaaaaaggaaattatatagtagttaatgcat 2391680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 2393395 - 2393441
Alignment:
Q  302 cactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| |||| |||| ||||||| |||||||||||||||||||||||    
T  2393395 cactggttaaggataagaaaaaggaaattatatagtagttaatgcat 2393441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 20923992 - 20924061
Alignment:
Q  275 gggaaatgctaaccggtg-tcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    |||||||||||||||||| | |||||  ||||| |||| | |||||||||| |||||||||||||||||||    
T  20923992 gggaaatgctaaccggtgcttccgggg-cactggttaagggtatgaaaaaggaaattatatagtagttaat 20924061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 53489983 - 53489937
Alignment:
Q  302 cactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| |||| | |||||||||| |||||||||||||||||||||||    
T  53489983 cactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 53489937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 28139309 - 28139382
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||| |||| |||    |||||| |||| |||||||||||  |||||| ||||||||||||||||    
T  28139309 gggaaatgctaactggtgcccccaagacactggttaaggatatgaaaaaagaaattaaatagtagttaatgcat 28139382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 52246582 - 52246655
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||| |||| | | ||  ||||| |||| |||||||||||  |||||||||||| ||||||||||    
T  52246582 gggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaatgaaattatatagttgttaatgcat 52246655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 13159930 - 13159966
Alignment:
Q  308 ttaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    |||| |||||||||||| |||||||||||||||||||    
T  13159930 ttaaggatatgaaaaaggaaattatatagtagttaat 13159966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 29241670 - 29241710
Alignment:
Q  308 ttaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||| |||||||||| | |||||||||||||||||||||||    
T  29241670 ttaaggatatgaaaatggaaattatatagtagttaatgcat 29241710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 31514829 - 31514861
Alignment:
Q  313 gatatgaaaaagaaaattatatagtagttaatg 345  Q
    ||||||||||| |||||||||||||||||||||    
T  31514829 gatatgaaaaataaaattatatagtagttaatg 31514861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 347
Target Start/End: Original strand, 14896 - 14968
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgca 347  Q
    |||||||||||||||||||||| ||  ||||| |||||||||| |||||  ||||||||||||||||||||||    
T  14896 gggaaatgctaaccggtgtccccggggcactggttaaagatataaaaaaagaaattatatagtagttaatgca 14968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 116207 - 116277
Alignment:
Q  278 aaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||| ||| ||  ||| | ||||||||||||||||| |||||||||||||||||||||||    
T  116207 aaatgctaaccggtgcccccggggcacaggttaaagatatgaaaaaggaaattatatagtagttaatgcat 116277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 23629761 - 23629692
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    |||||||| |||||| || ||||||  |||||||||| |||||||||||||||||||||||||||||||||    
T  23629761 gggaaatgttaaccgatgccccgggg-cactgattaaggatatgaaaaagaaaattatatagtagttaatg 23629692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 392096 - 392169
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| | |||||||||| |||||||||||||||||||||||    
T  392096 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 392169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 1391363 - 1391291
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||||||  |||||   ||||||||| |||||||||||| |||||||||||||||||||||||    
T  1391363 gggaaatgctaaccggtgctccggggt-actgattaaggatatgaaaaaggaaattatatagtagttaatgcat 1391291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 7851345 - 7851272
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| |||  |  ||||| |||| |||||||||||||||||||||||||| |||||||||    
T  7851345 gggaaatgctaaccggtgcccccagggcactggttaaggatatgaaaaagaaaattatatagtaattaatgcat 7851272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 20897948 - 20898021
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| |||  |  ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  20897948 gggaaatgctaaccggtgcccccagggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 20898021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 27433492 - 27433565
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| | |||||||||| |||||||||||||||||||||||    
T  27433492 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 27433565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 34396713 - 34396640
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| |||  | |||| | |||| |||||||||||| |||||||||||||||||||||||    
T  34396713 gggaaatgctaaccggtgcccccaggacacaggttaaggatatgaaaaaggaaattatatagtagttaatgcat 34396640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 34852030 - 34851962
Alignment:
Q  279 aatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||  || || |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  34852030 aatgctaaccggtgctcctgggacactg-ttaaagatatgaaaaaggaaattatatagtagttaatgcat 34851962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 2350654 - 2350722
Alignment:
Q  277 gaaatgctaaccggtg-tcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    |||||||||||||||| |||||||  ||||| |||| |||||||||||| ||||||||||||||||||||    
T  2350654 gaaatgctaaccggtgctcccggg-gcactggttaaggatatgaaaaaggaaattatatagtagttaatg 2350722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 3515766 - 3515839
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| |||  |  ||||| |||| | |||||||||| |||||||||||||||||||||||    
T  3515766 gggaaatgctaaccggtgcccccagggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 3515839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 12145303 - 12145230
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| |||  |  ||||  |||| |||||||||||| |||||||||||||||||||||||    
T  12145303 gggaaatgctaaccggtgcccccagtgcacttgttaaggatatgaaaaaggaaattatatagtagttaatgcat 12145230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 21878533 - 21878460
Alignment:
Q  275 gggaaatgctaaccggtg--tcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||||||  |||||||  ||| | |||| |||||||||||| |||||||||||||||||||||||    
T  21878533 gggaaatgctaaccggtgcctcccggg--cacgggttaaggatatgaaaaaggaaattatatagtagttaatgcat 21878460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 35043890 - 35043959
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    ||||||||||||| |||||||  || |||||| |||| |||||||||||  |||||||||||||||||||    
T  35043890 gggaaatgctaactggtgtccacgggacactggttaaggatatgaaaaaagaaattatatagtagttaat 35043959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 18276774 - 18276728
Alignment:
Q  302 cactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  18276774 cactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 18276728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 34477709 - 34477663
Alignment:
Q  302 cactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  34477709 cactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 34477663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 23402138 - 23402211
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||| |||| | | ||  ||||| |||| |||||||||||| ||||||||||||| |||||||||    
T  23402138 gggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcat 23402211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 26467277 - 26467237
Alignment:
Q  308 ttaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  26467277 ttaaggatatgaaaaaggaaattatatagtagttaatgcat 26467237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 29451268 - 29451228
Alignment:
Q  308 ttaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  29451268 ttaaggatatgaaaaaggaaattatatagtagttaatgcat 29451228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 31280321 - 31280394
Alignment:
Q  275 gggaaatgctaaccggtg-tcccgggaacactgattaa-agatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||||| |  |||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  31280321 gggaaatgctaaccggtgctcccgagg-cactgattaagaga-atgaaaaaggaaattatatagtagttaatgcat 31280394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 3026193 - 3026122
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||| |||| ||||||  ||||| |||| | |||||||||  |||||||| ||||||||||||||    
T  3026193 gggaaatgctaactggtgccccggg--cactggttaagggtatgaaaaatgaaattatacagtagttaatgcat 3026122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 13529482 - 13529528
Alignment:
Q  302 cactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| |||| ||| |||||||| |||||||||||||||||||||||    
T  13529482 cactggttaaggatgtgaaaaaggaaattatatagtagttaatgcat 13529528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 29978233 - 29978302
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    |||||||||||||||||| | | ||| ||||  |||| |||||||||||| ||||||||||||| ||||||    
T  29978233 gggaaatgctaaccggtgcctccgga-cactagttaaggatatgaaaaaggaaattatatagtatttaatg 29978302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 2580980 - 2581025
Alignment:
Q  303 actgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||| |||| ||||| |||||| |||||||||||||||||||||||    
T  2580980 actggttaatgatataaaaaaggaaattatatagtagttaatgcat 2581025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 4215695 - 4215768
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||| ||||||||| ||| ||  ||||| ||||   |||||||||| |||||||||| ||||||||||||    
T  4215695 gggaaatgttaaccggtgcccccggggcactggttaagagtatgaaaaaggaaattatataatagttaatgcat 4215768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 12525719 - 12525788
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    |||||||||||||||||| | | ||   |||| |||| | |||||||||| |||||||||||||||||||    
T  12525719 gggaaatgctaaccggtgcctccggggtactggttaagggtatgaaaaaggaaattatatagtagttaat 12525788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 32929694 - 32929621
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  || || |||| | |||||||||| |||||||||| || |||||||||    
T  32929694 gggaaatgctaaccggtgcccccggggcaatggttaagggtatgaaaaaggaaattatatattaattaatgcat 32929621  T

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Target: scaffold0264 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 22961 - 23030
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    |||||||||||||||||| ||| ||| ||||| |||| |||||||||||| ||||||||||||| |||||    
T  22961 gggaaatgctaaccggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtaattaat 23030  T

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Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 53871 - 53798
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||||||||||||||| ||| ||  ||||| |||| | |||||||||| |||||||||||||||||||||||    
T  53871 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 53798  T

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Target: scaffold0188 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 6295 - 6223
Alignment:
Q  276 ggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||||| ||| ||  ||||| |||| |||||||||||| ||| |||||||||||||||||||    
T  6295 ggaaatgctaaccggtgcccctggggcactggttaaggatatgaaaaaggaaactatatagtagttaatgcat 6223  T

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Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 348
Target Start/End: Complemental strand, 68483 - 68403
Alignment:
Q  268 caattaggggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||| ||||||||||||| |||| ||| ||  ||||| |||| |||||||||||  |||||||||||||||||||||||    
T  68483 caattaagggaaatgctaactggtgcccccggggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 68403  T

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Target: scaffold0524 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 819 - 898
Alignment:
Q  269 aattaggggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| ||||||||||| ||||||   | ||| ||||  |||| ||||||||||||||||||||||||||||||||||||    
T  819 aattatgggaaatgctagccggtgcttccggagcactagttaaggatatgaaaaagaaaattatatagtagttaatgcat 898  T

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Target: scaffold0206 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 11154 - 11083
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||| |||| |||||  |||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  11154 gggaaatgctaactggtgccccgg--acactggttaaggatatgaaaaaggaaattatatattagttaatgcat 11083  T

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Target: scaffold0045 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 50548 - 50618
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatg 345  Q
    |||||||| ||||||||| | | ||  ||||| ||||||||||||||||| ||||||||||||||||||||    
T  50548 gggaaatgttaaccggtgcctccggggcactggttaaagatatgaaaaaggaaattatatagtagttaatg 50618  T

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Target: scaffold0045; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 53506 - 53459
Alignment:
Q  301 acactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    |||||| |||| ||||| |||||| |||||||||||||||||||||||    
T  53506 acactggttaaggatataaaaaaggaaattatatagtagttaatgcat 53459  T

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Target: scaffold1152 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 678 - 747
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    |||||||||||| ||||| |||  || ||| | ||||||||||||||||| |||||||||||||||||||    
T  678 gggaaatgctaatcggtgcccccagagcacgggttaaagatatgaaaaaggaaattatatagtagttaat 747  T

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Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 338
Target Start/End: Complemental strand, 74659 - 74597
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagta 338  Q
    ||||||| |||||||||  ||||| || ||||||||||||||||||||| ||||||||||||||    
T  74659 gggaaatactaaccggtaccccgg-aatactgattaaagatatgaaaaaaaaaattatatagta 74597  T

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Target: scaffold0674 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 8056 - 8010
Alignment:
Q  302 cactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  8056 cactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 8010  T

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Target: scaffold0549 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 7315 - 7361
Alignment:
Q  302 cactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||    
T  7315 cactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 7361  T

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Target: scaffold1266 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 293 - 365
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||| |||||||||| ||| ||  ||||| ||||  |||||||||||||||||||||| ||||||||||||    
T  293 gggaaatcctaaccggtgccccaggg-cactggttaagcatatgaaaaagaaaattatataatagttaatgcat 365  T

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Target: scaffold0325 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 17654 - 17583
Alignment:
Q  275 gggaaatgctaaccggtgtcccgggaacactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 348  Q
    ||||||||||||||| ||||||| |  ||||| |||  ||||||||||||||||||||||||||| ||||||||    
T  17654 gggaaatgctaaccg-tgtcccgagg-cactgtttacggatatgaaaaagaaaattatatagtagctaatgcat 17583  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 69259 - 69295
Alignment:
Q  308 ttaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    |||| |||||||||||| |||||||||||||||||||    
T  69259 ttaaggatatgaaaaagtaaattatatagtagttaat 69295  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 344
Target Start/End: Complemental strand, 147058 - 147022
Alignment:
Q  308 ttaaagatatgaaaaagaaaattatatagtagttaat 344  Q
    |||| |||||||||||| |||||||||||||||||||    
T  147058 ttaaggatatgaaaaaggaaattatatagtagttaat 147022  T

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