View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19725_low_13 (Length: 284)
Name: NF19725_low_13
Description: NF19725
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19725_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 11 - 266
Target Start/End: Complemental strand, 45108590 - 45108335
Alignment:
| Q |
11 |
agaatatgaaaggtgtatatgtagataaatcaagacaccactatggctatatatggtgattgctaaggctaataacagttacagatattactattattat |
110 |
Q |
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| T |
45108590 |
agaatatgaaaggtttatatatagataaatcaagacaccactatggctatatatggtgattgctaaggctaataacagttacagatattactattattat |
45108491 |
T |
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| Q |
111 |
tggtgcgcctcacgtctaattactcggtatacttggcctcacagctaacaggatacaacaacggcttctcactaacatagcacatgaattatcaagggca |
210 |
Q |
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| T |
45108490 |
tggtgcgcctcacgtctaattactcggtatacttggcctcacagctaacagaatacaacaacggcttctcactaacatagcacatgaattatcaagggca |
45108391 |
T |
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| Q |
211 |
caaaccccataaaatatgctcacagccaaaccataggccgtaactacaggggacct |
266 |
Q |
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| T |
45108390 |
caaaccccataaaatatgctcacagccaaaccataggccgtaacaacaggggacct |
45108335 |
T |
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