View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19725_low_9 (Length: 368)

Name: NF19725_low_9
Description: NF19725
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19725_low_9
NF19725_low_9
[»] chr3 (56 HSPs)
chr3 (1-358)||(16743998-16744356)
chr3 (2-315)||(13838916-13839232)
chr3 (16-315)||(14842487-14842788)
chr3 (14-241)||(17912483-17912710)
chr3 (2-315)||(2049832-2050147)
chr3 (109-315)||(12030073-12030279)
chr3 (179-358)||(19231982-19232164)
chr3 (76-241)||(2449238-2449404)
chr3 (2-278)||(15858986-15859265)
chr3 (2-251)||(51158008-51158259)
chr3 (195-315)||(19260749-19260869)
chr3 (16-234)||(15936634-15936854)
chr3 (109-241)||(13975722-13975853)
chr3 (16-234)||(15938476-15938696)
chr3 (109-241)||(45860937-45861068)
chr3 (280-358)||(15857120-15857198)
chr3 (109-241)||(13954890-13955021)
chr3 (283-358)||(3992873-3992948)
chr3 (283-358)||(55513193-55513268)
chr3 (283-358)||(2844514-2844589)
chr3 (283-358)||(54037981-54038056)
chr3 (2-316)||(15614856-15615170)
chr3 (283-358)||(17955837-17955916)
chr3 (283-358)||(7854305-7854380)
chr3 (283-344)||(45581954-45582016)
chr3 (109-229)||(55316351-55316471)
chr3 (48-207)||(16821207-16821369)
chr3 (109-229)||(41270207-41270327)
chr3 (299-356)||(17205019-17205076)
chr3 (283-356)||(38810868-38810941)
chr3 (301-356)||(12031849-12031904)
chr3 (283-356)||(13301323-13301396)
chr3 (283-356)||(13311979-13312052)
chr3 (184-225)||(14080715-14080756)
chr3 (299-356)||(17191879-17191936)
chr3 (283-315)||(2449152-2449184)
chr3 (283-315)||(16261777-16261809)
chr3 (283-315)||(16933869-16933901)
chr3 (283-315)||(17912398-17912430)
chr3 (283-315)||(23492696-23492728)
chr3 (283-315)||(38168237-38168269)
chr3 (13-89)||(47984683-47984759)
chr3 (13-89)||(48003257-48003333)
chr3 (283-315)||(53771365-53771397)
chr3 (299-356)||(3576290-3576347)
chr3 (284-349)||(15550922-15550987)
chr3 (283-315)||(11986080-11986112)
chr3 (283-315)||(13954804-13954836)
chr3 (283-315)||(14285289-14285321)
chr3 (283-315)||(19947026-19947058)
chr3 (283-315)||(30153265-30153297)
chr3 (283-315)||(33342204-33342236)
chr3 (283-315)||(45861122-45861154)
chr3 (13-89)||(47993970-47994046)
chr3 (13-89)||(48012543-48012619)
chr3 (283-315)||(51961031-51961063)
[»] chr8 (32 HSPs)
chr8 (1-241)||(22907214-22907455)
chr8 (2-315)||(16193643-16193957)
chr8 (14-358)||(16404857-16405201)
chr8 (2-315)||(24928716-24929032)
chr8 (76-241)||(5238184-5238350)
chr8 (76-241)||(24661248-24661414)
chr8 (2-315)||(43373392-43373709)
chr8 (76-241)||(43685643-43685809)
chr8 (14-241)||(17345604-17345832)
chr8 (283-358)||(274766-274841)
chr8 (283-358)||(641008-641083)
chr8 (283-358)||(826814-826889)
chr8 (283-358)||(24716719-24716794)
chr8 (14-229)||(6774258-6774475)
chr8 (2-229)||(24549004-24549233)
chr8 (109-207)||(21844594-21844692)
chr8 (109-207)||(21851987-21852085)
chr8 (283-358)||(39115598-39115673)
chr8 (109-229)||(30120854-30120974)
chr8 (109-229)||(16674392-16674512)
chr8 (299-356)||(17285543-17285600)
chr8 (299-356)||(21198005-21198062)
chr8 (184-225)||(23226076-23226117)
chr8 (2-91)||(23837219-23837308)
chr8 (283-315)||(5238404-5238436)
chr8 (283-315)||(22907128-22907160)
chr8 (283-315)||(24385652-24385684)
chr8 (283-315)||(24661162-24661194)
chr8 (283-315)||(43685863-43685895)
chr8 (283-315)||(2545265-2545297)
chr8 (283-315)||(3431176-3431208)
chr8 (283-315)||(22886654-22886686)
[»] chr4 (31 HSPs)
chr4 (1-241)||(26680222-26680463)
chr4 (2-358)||(54118125-54118485)
chr4 (109-315)||(122020-122226)
chr4 (2-315)||(13246452-13246769)
chr4 (1-315)||(15675009-15675331)
chr4 (76-241)||(10488659-10488825)
chr4 (76-241)||(16327926-16328092)
chr4 (44-315)||(10104170-10104449)
chr4 (1-214)||(31115650-31115865)
chr4 (179-315)||(33240901-33241043)
chr4 (109-241)||(13048221-13048353)
chr4 (283-358)||(25119064-25119139)
chr4 (283-358)||(5682385-5682460)
chr4 (48-207)||(10644287-10644449)
chr4 (209-315)||(31132545-31132657)
chr4 (283-356)||(41165808-41165881)
chr4 (2-78)||(111417-111493)
chr4 (44-225)||(40885570-40885753)
chr4 (109-229)||(47357786-47357906)
chr4 (2-91)||(41166083-41166172)
chr4 (299-356)||(47534933-47534990)
chr4 (283-315)||(14952085-14952117)
chr4 (283-315)||(15135907-15135939)
chr4 (283-315)||(15272211-15272243)
chr4 (283-315)||(16327840-16327872)
chr4 (283-315)||(16609013-16609045)
chr4 (283-315)||(26680517-26680549)
chr4 (4-91)||(15044851-15044938)
chr4 (283-315)||(8045272-8045304)
chr4 (27-91)||(13809647-13809711)
chr4 (283-315)||(16523146-16523178)
[»] chr1 (23 HSPs)
chr1 (109-358)||(41394353-41394602)
chr1 (16-315)||(20931381-20931682)
chr1 (2-315)||(20445701-20446019)
chr1 (109-315)||(20913161-20913367)
chr1 (2-315)||(20893551-20893867)
chr1 (2-315)||(37844374-37844692)
chr1 (2-315)||(20531466-20531783)
chr1 (76-241)||(51452589-51452755)
chr1 (283-358)||(21860334-21860409)
chr1 (283-357)||(44034829-44034903)
chr1 (109-316)||(45051554-45051759)
chr1 (109-207)||(2116386-2116484)
chr1 (249-356)||(27675086-27675191)
chr1 (283-358)||(41218728-41218803)
chr1 (110-191)||(22227941-22228022)
chr1 (110-191)||(22232638-22232719)
chr1 (109-207)||(18601140-18601238)
chr1 (109-229)||(5072388-5072508)
chr1 (299-356)||(13376711-13376768)
chr1 (299-356)||(20177513-20177570)
chr1 (2-69)||(2116276-2116343)
chr1 (283-314)||(15861327-15861358)
chr1 (283-315)||(51452809-51452841)
[»] scaffold0078 (3 HSPs)
scaffold0078 (1-241)||(37066-37307)
scaffold0078 (283-358)||(41632-41707)
scaffold0078 (283-315)||(36980-37012)
[»] chr7 (43 HSPs)
chr7 (1-241)||(7293038-7293279)
chr7 (2-356)||(3059988-3060344)
chr7 (2-315)||(16211788-16212103)
chr7 (1-315)||(11580661-11580981)
chr7 (2-315)||(13036938-13037255)
chr7 (2-315)||(36052689-36053003)
chr7 (76-241)||(11516324-11516490)
chr7 (76-241)||(15441564-15441730)
chr7 (76-241)||(30262129-30262295)
chr7 (2-241)||(47481031-47481272)
chr7 (16-234)||(18253842-18254062)
chr7 (109-241)||(25292338-25292470)
chr7 (13-240)||(13321047-13321278)
chr7 (283-358)||(32493903-32493978)
chr7 (109-206)||(16478985-16479082)
chr7 (283-358)||(126738-126813)
chr7 (109-207)||(13572808-13572906)
chr7 (283-358)||(1936874-1936949)
chr7 (283-358)||(111126-111201)
chr7 (113-313)||(295893-296094)
chr7 (109-229)||(10989541-10989661)
chr7 (249-356)||(13377819-13377924)
chr7 (284-358)||(7283913-7283987)
chr7 (117-207)||(13911046-13911136)
chr7 (110-207)||(2437590-2437687)
chr7 (299-356)||(13389693-13389750)
chr7 (199-241)||(14113989-14114031)
chr7 (199-241)||(14423639-14423681)
chr7 (283-315)||(2029244-2029276)
chr7 (283-315)||(7293333-7293365)
chr7 (283-315)||(11516544-11516576)
chr7 (283-315)||(14113903-14113935)
chr7 (283-315)||(15441478-15441510)
chr7 (246-315)||(15709428-15709501)
chr7 (300-356)||(16919870-16919926)
chr7 (283-315)||(30262043-30262075)
chr7 (283-315)||(42056188-42056220)
chr7 (283-315)||(371417-371449)
chr7 (283-315)||(3049905-3049937)
chr7 (283-315)||(13321334-13321366)
chr7 (283-311)||(15516765-15516793)
chr7 (283-315)||(25124450-25124482)
chr7 (283-315)||(47480944-47480976)
[»] chr2 (35 HSPs)
chr2 (2-358)||(19794586-19794945)
chr2 (14-358)||(43642838-43643186)
chr2 (2-358)||(20627195-20627554)
chr2 (2-315)||(36982364-36982682)
chr2 (2-315)||(462760-463075)
chr2 (2-315)||(8891264-8891581)
chr2 (76-241)||(19689401-19689567)
chr2 (76-241)||(23820168-23820334)
chr2 (76-241)||(14906440-14906606)
chr2 (76-241)||(20015108-20015274)
chr2 (1-315)||(24341309-24341631)
chr2 (2-241)||(25265390-25265631)
chr2 (109-241)||(17396653-17396784)
chr2 (221-315)||(22863171-22863267)
chr2 (283-358)||(22275045-22275120)
chr2 (283-358)||(22284278-22284353)
chr2 (284-358)||(15633538-15633612)
chr2 (14-191)||(7507894-7508073)
chr2 (299-356)||(43646232-43646289)
chr2 (109-229)||(19886661-19886781)
chr2 (283-316)||(19689314-19689347)
chr2 (283-315)||(9652796-9652828)
chr2 (283-315)||(14906354-14906386)
chr2 (304-356)||(19660221-19660273)
chr2 (283-315)||(23820388-23820420)
chr2 (283-314)||(25213372-25213403)
chr2 (283-356)||(19666848-19666921)
chr2 (299-356)||(25305769-25305826)
chr2 (249-356)||(31146032-31146138)
chr2 (283-315)||(7507757-7507789)
chr2 (283-315)||(17396567-17396599)
chr2 (283-315)||(20015328-20015360)
chr2 (13-57)||(24884718-24884762)
chr2 (283-315)||(28031134-28031166)
chr2 (283-315)||(33128372-33128404)
[»] scaffold0001 (2 HSPs)
scaffold0001 (13-315)||(171938-172242)
scaffold0001 (13-315)||(177641-177945)
[»] scaffold0023 (3 HSPs)
scaffold0023 (2-315)||(48620-48935)
scaffold0023 (109-207)||(36225-36323)
scaffold0023 (283-315)||(61122-61154)
[»] scaffold0266 (2 HSPs)
scaffold0266 (16-315)||(1160-1462)
scaffold0266 (2-315)||(3508-3823)
[»] scaffold0195 (2 HSPs)
scaffold0195 (2-312)||(19228-19543)
scaffold0195 (2-241)||(21312-21553)
[»] scaffold0106 (1 HSPs)
scaffold0106 (2-315)||(41751-42066)
[»] scaffold0077 (2 HSPs)
scaffold0077 (2-316)||(36836-37154)
scaffold0077 (284-358)||(15324-15398)
[»] chr5 (33 HSPs)
chr5 (2-315)||(23506987-23507302)
chr5 (13-315)||(27182471-27182777)
chr5 (13-315)||(18530988-18531297)
chr5 (76-241)||(20623066-20623232)
chr5 (76-241)||(21233528-21233694)
chr5 (4-315)||(22053753-22054072)
chr5 (79-241)||(37052844-37053007)
chr5 (76-241)||(16536294-16536460)
chr5 (76-239)||(25900408-25900571)
chr5 (14-241)||(34939312-34939540)
chr5 (109-229)||(29188284-29188404)
chr5 (111-207)||(27009975-27010071)
chr5 (48-207)||(4200007-4200169)
chr5 (284-358)||(11584374-11584448)
chr5 (109-207)||(43443417-43443515)
chr5 (109-229)||(19500031-19500151)
chr5 (109-229)||(22366481-22366601)
chr5 (109-229)||(25426760-25426880)
chr5 (109-207)||(18778014-18778112)
chr5 (109-229)||(12506-12626)
chr5 (109-229)||(21073595-21073715)
chr5 (283-356)||(5450695-5450768)
chr5 (299-356)||(21222462-21222519)
chr5 (283-315)||(16105967-16105999)
chr5 (283-315)||(20623286-20623318)
chr5 (283-315)||(21233442-21233474)
chr5 (283-315)||(25900320-25900352)
chr5 (283-315)||(37053061-37053093)
chr5 (4-91)||(23493942-23494029)
chr5 (283-315)||(108728-108760)
chr5 (27-91)||(7728466-7728530)
chr5 (283-315)||(9730278-9730310)
chr5 (283-315)||(16536514-16536546)
[»] chr6 (31 HSPs)
chr6 (13-315)||(23153480-23153786)
chr6 (2-314)||(14626045-14626359)
chr6 (14-241)||(1657748-1657976)
chr6 (2-241)||(35009439-35009680)
chr6 (14-241)||(15862507-15862734)
chr6 (246-315)||(23148266-23148335)
chr6 (283-358)||(19983149-19983224)
chr6 (283-358)||(35015014-35015089)
chr6 (14-316)||(1650020-1650322)
chr6 (283-358)||(18583640-18583715)
chr6 (158-241)||(27751605-27751688)
chr6 (299-356)||(21623506-21623563)
chr6 (109-201)||(25175695-25175787)
chr6 (109-229)||(27653983-27654103)
chr6 (299-356)||(22361619-22361676)
chr6 (284-356)||(14152632-14152704)
chr6 (283-315)||(18002395-18002427)
chr6 (2-90)||(18381821-18381909)
chr6 (283-315)||(23995247-23995279)
chr6 (283-315)||(26090059-26090091)
chr6 (283-314)||(4991396-4991427)
chr6 (285-315)||(15742120-15742150)
chr6 (44-241)||(29665937-29666137)
chr6 (2-83)||(27740860-27740941)
chr6 (283-315)||(1657661-1657693)
chr6 (283-315)||(15862789-15862821)
chr6 (283-315)||(18823283-18823315)
chr6 (283-315)||(18839138-18839170)
chr6 (27-91)||(25367374-25367438)
chr6 (283-315)||(27751742-27751774)
chr6 (283-315)||(32276659-32276691)
[»] scaffold0018 (1 HSPs)
scaffold0018 (109-313)||(51110-51314)
[»] scaffold0012 (2 HSPs)
scaffold0012 (2-315)||(247366-247683)
scaffold0012 (283-315)||(34075-34107)
[»] scaffold0009 (1 HSPs)
scaffold0009 (2-315)||(272047-272362)
[»] scaffold0175 (1 HSPs)
scaffold0175 (109-315)||(882-1088)
[»] scaffold0162 (4 HSPs)
scaffold0162 (2-315)||(26340-26656)
scaffold0162 (109-241)||(8180-8312)
scaffold0162 (299-356)||(6877-6934)
scaffold0162 (2-62)||(8358-8418)
[»] scaffold0413 (1 HSPs)
scaffold0413 (109-315)||(5990-6196)
[»] scaffold0008 (2 HSPs)
scaffold0008 (2-315)||(128095-128409)
scaffold0008 (117-207)||(31697-31787)
[»] scaffold0302 (1 HSPs)
scaffold0302 (109-315)||(12244-12450)
[»] scaffold0218 (1 HSPs)
scaffold0218 (2-305)||(4996-5302)
[»] scaffold0141 (4 HSPs)
scaffold0141 (76-241)||(26892-27058)
scaffold0141 (76-234)||(22637-22796)
scaffold0141 (283-315)||(22857-22889)
scaffold0141 (283-315)||(27112-27144)
[»] scaffold0124 (2 HSPs)
scaffold0124 (76-241)||(1582-1748)
scaffold0124 (283-315)||(1496-1528)
[»] scaffold0498 (1 HSPs)
scaffold0498 (2-315)||(8900-9215)
[»] scaffold0011 (1 HSPs)
scaffold0011 (2-315)||(123087-123405)
[»] scaffold0028 (3 HSPs)
scaffold0028 (109-315)||(89378-89586)
scaffold0028 (190-315)||(107708-107835)
scaffold0028 (283-314)||(130880-130911)
[»] scaffold0025 (3 HSPs)
scaffold0025 (1-315)||(8870-9192)
scaffold0025 (2-267)||(148743-149012)
scaffold0025 (221-315)||(146844-146938)
[»] scaffold0132 (3 HSPs)
scaffold0132 (13-241)||(13539-13769)
scaffold0132 (283-358)||(42677-42749)
scaffold0132 (283-315)||(13824-13856)
[»] scaffold0049 (2 HSPs)
scaffold0049 (16-234)||(48223-48443)
scaffold0049 (284-358)||(20493-20567)
[»] scaffold0772 (2 HSPs)
scaffold0772 (109-234)||(5660-5785)
scaffold0772 (283-315)||(5846-5878)
[»] scaffold1542 (1 HSPs)
scaffold1542 (2-241)||(534-775)
[»] scaffold0026 (3 HSPs)
scaffold0026 (16-234)||(107783-108003)
scaffold0026 (109-172)||(64585-64648)
scaffold0026 (184-226)||(89863-89905)
[»] scaffold0125 (2 HSPs)
scaffold0125 (2-241)||(41670-41911)
scaffold0125 (275-315)||(41957-41997)
[»] scaffold0034 (1 HSPs)
scaffold0034 (283-358)||(80187-80262)
[»] scaffold0075 (1 HSPs)
scaffold0075 (14-241)||(34460-34690)
[»] scaffold0016 (3 HSPs)
scaffold0016 (282-358)||(166121-166197)
scaffold0016 (282-357)||(162036-162111)
scaffold0016 (283-356)||(116410-116483)
[»] scaffold0529 (1 HSPs)
scaffold0529 (14-230)||(2996-3215)
[»] scaffold0215 (2 HSPs)
scaffold0215 (2-207)||(9371-9578)
scaffold0215 (2-207)||(16269-16476)
[»] scaffold0184 (1 HSPs)
scaffold0184 (283-358)||(31137-31212)
[»] scaffold0686 (2 HSPs)
scaffold0686 (283-357)||(5735-5809)
scaffold0686 (283-357)||(5941-6015)
[»] scaffold0420 (1 HSPs)
scaffold0420 (109-207)||(13347-13445)
[»] scaffold0116 (2 HSPs)
scaffold0116 (109-207)||(167-265)
scaffold0116 (283-358)||(30417-30492)
[»] scaffold0342 (1 HSPs)
scaffold0342 (282-358)||(309-385)
[»] scaffold0076 (1 HSPs)
scaffold0076 (109-206)||(43129-43226)
[»] scaffold0022 (1 HSPs)
scaffold0022 (110-191)||(5254-5335)
[»] scaffold1164 (1 HSPs)
scaffold1164 (284-358)||(1701-1775)
[»] scaffold0139 (2 HSPs)
scaffold0139 (109-207)||(14083-14181)
scaffold0139 (112-207)||(21138-21233)
[»] scaffold0122 (2 HSPs)
scaffold0122 (284-358)||(19807-19881)
scaffold0122 (284-358)||(24111-24185)
[»] scaffold1711 (1 HSPs)
scaffold1711 (109-229)||(1304-1424)
[»] scaffold0876 (1 HSPs)
scaffold0876 (284-354)||(94-164)
[»] scaffold0310 (2 HSPs)
scaffold0310 (284-358)||(6261-6335)
scaffold0310 (284-321)||(4-41)
[»] scaffold0369 (1 HSPs)
scaffold0369 (110-191)||(3854-3936)
[»] scaffold0507 (1 HSPs)
scaffold0507 (283-356)||(1363-1436)
[»] scaffold0013 (1 HSPs)
scaffold0013 (299-356)||(35816-35873)
[»] scaffold0622 (1 HSPs)
scaffold0622 (2-78)||(9404-9480)
[»] scaffold0361 (1 HSPs)
scaffold0361 (158-241)||(3370-3453)
[»] scaffold1295 (1 HSPs)
scaffold1295 (299-356)||(442-499)
[»] scaffold0053 (1 HSPs)
scaffold0053 (299-356)||(76699-76756)
[»] scaffold0004 (1 HSPs)
scaffold0004 (283-316)||(193396-193429)
[»] scaffold0706 (1 HSPs)
scaffold0706 (283-315)||(6443-6475)
[»] scaffold0597 (1 HSPs)
scaffold0597 (283-315)||(878-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (283-315)||(9882-9914)
[»] scaffold0251 (1 HSPs)
scaffold0251 (283-315)||(13285-13317)
[»] scaffold0058 (2 HSPs)
scaffold0058 (283-315)||(57392-57424)
scaffold0058 (184-225)||(70307-70348)
[»] scaffold0032 (2 HSPs)
scaffold0032 (283-315)||(55904-55936)
scaffold0032 (283-315)||(108075-108107)
[»] scaffold0207 (1 HSPs)
scaffold0207 (272-315)||(18015-18058)
[»] scaffold0006 (1 HSPs)
scaffold0006 (4-91)||(197390-197477)
[»] scaffold1272 (1 HSPs)
scaffold1272 (299-356)||(632-689)
[»] scaffold0483 (1 HSPs)
scaffold0483 (299-356)||(6999-7056)
[»] scaffold0456 (2 HSPs)
scaffold0456 (184-225)||(1546-1587)
scaffold0456 (184-225)||(8691-8732)
[»] scaffold0123 (1 HSPs)
scaffold0123 (184-225)||(8216-8257)
[»] scaffold0084 (1 HSPs)
scaffold0084 (116-234)||(56106-56226)
[»] scaffold0080 (1 HSPs)
scaffold0080 (299-356)||(43651-43708)
[»] scaffold0010 (1 HSPs)
scaffold0010 (299-356)||(31357-31414)
[»] scaffold0970 (1 HSPs)
scaffold0970 (2-58)||(2476-2532)
[»] scaffold0700 (1 HSPs)
scaffold0700 (4-68)||(2548-2612)
[»] scaffold0367 (1 HSPs)
scaffold0367 (283-315)||(17209-17241)
[»] scaffold0335 (1 HSPs)
scaffold0335 (283-315)||(5476-5508)
[»] scaffold0303 (1 HSPs)
scaffold0303 (283-315)||(4346-4378)
[»] scaffold0234 (1 HSPs)
scaffold0234 (283-315)||(17304-17336)
[»] scaffold0173 (1 HSPs)
scaffold0173 (283-315)||(5549-5581)
[»] scaffold0118 (1 HSPs)
scaffold0118 (283-315)||(34308-34340)
[»] scaffold0066 (1 HSPs)
scaffold0066 (283-315)||(45338-45370)
[»] scaffold0039 (1 HSPs)
scaffold0039 (283-315)||(12418-12450)


Alignment Details
Target: chr3 (Bit Score: 287; Significance: 1e-161; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 1 - 358
Target Start/End: Complemental strand, 16744356 - 16743998
Alignment:
Q  1 tatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattc 100  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16744356 tatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactataacatgtcaaattc 16744257  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    |||||||| |||||||||||||||||| |||||| |||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| |||||||||    
T  16744256 atccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttattatcaattcatggatacaaaca 16744157  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagac 299  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16744156 tatcatcaaagttggagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatggtaaagac 16744057  T
Q  300 taacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    ||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16744056 taacctcgttaccttaattatctccaactattagctctagcttcactttagctcctatg 16743998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 2 - 315
Target Start/End: Original strand, 13838916 - 13839232
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||||| ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| |||||| |||| ||||| |  |||| |||    
T  13838916 atacccaaacaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatccaaccacaacttagcaaaattc 13839015  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| |||||||||||||||||||||    
T  13839016 accaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatgcatacaaaca 13839115  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaaga 298  Q
    |||||||| ||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  13839116 tatcatcacagttggagcacgaatttagcaacaattattcataatcaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgatgaaga 13839215  T
Q  299 ctaacccccttacctta 315  Q
    |||||||||||||||||    
T  13839216 ctaacccccttacctta 13839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 16 - 315
Target Start/End: Complemental strand, 14842788 - 14842487
Alignment:
Q  16 attcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcaca 113  Q
    |||||||||  | |||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||    
T  14842788 attcatcaatcataacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcaca 14842689  T
Q  114 attttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 213  Q
    ||||||||||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| ||||  |||||||||||||||||||||||||||| |||||    
T  14842688 attttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattatcttcaattcatgcatacaaacatatcatcacagttg 14842589  T
Q  214 gagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacct 313  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||| ||| ||||||||||||||||||||||||||||||||    
T  14842588 gagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaagtgaagatgattatgataaagactaacccccttacct 14842489  T
Q  314 ta 315  Q
    ||    
T  14842488 ta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 14 - 241
Target Start/End: Complemental strand, 17912710 - 17912483
Alignment:
Q  14 tgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattt-gcac 112  Q
    |||||||||||| |||||||| |||| || ||| |||||| |||| ||| |||||||||||||||||||||||||||| ||||||||||| |||| ||||    
T  17912710 tgattcatcaacaacaacatcaattaacaacaataacatcgattgaacatgaatcatagctcaattcaactacaacatatcaaattcatcaattttgcac 17912611  T
Q  113 aattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagtt 212  Q
    |||||||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||||||| |||||    
T  17912610 aattttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatc-aagtt 17912512  T
Q  213 ggagcacaaatttagcaacaatcatccat 241  Q
    ||||||| |||||||||||||| ||||||    
T  17912511 ggagcacgaatttagcaacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 2 - 315
Target Start/End: Original strand, 2049832 - 2050147
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| |||||||| |||| || | | | ||||||||| |||| ||||| | ||||| | ||| ||||| |  |||| |||    
T  2049832 atacccaagcaatgattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaaaaatcaaatctcaaattaacaacaacttagcaaaattc 2049931  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| || || |||| | ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||| |||||||||||    
T  2049932 accaattgagcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcaggcatacaaaca 2050031  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagac 299  Q
    |||| ||| ||||||||||| |||||||||||||| |||||||| ||||||| ||||||||||||||| || ||||||||||||||||||||||||||||    
T  2050032 tatcgtcacagttggagcacgaatttagcaacaattatccataagcaaaattgatacaacatttgaaatttcacaaaatgatgatgattatgataaagac 2050131  T
Q  300 taacccccttacctta 315  Q
    ||||||||||||||||    
T  2050132 taacccccttacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 109 - 315
Target Start/End: Complemental strand, 12030279 - 12030073
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    |||||| ||||| ||||| ||| || ||||||||| |||||| ||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  12030279 gcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 12030180  T
Q  209 agttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 308  Q
    ||||||||||| |||||||||||||| |||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||| || |||||||||    
T  12030179 agttggagcacgaatttagcaacaattatccataagcaaaagtcatacaacatttgaaatttcacaaaatgatgatgattatgataatgattaaccccct 12030080  T
Q  309 tacctta 315  Q
    |||||||    
T  12030079 tacctta 12030073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 179 - 358
Target Start/End: Original strand, 19231982 - 19232164
Alignment:
Q  179 atcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaattt-acaa 275  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||||||||| |||||| ||   |||||||||||||||||||||||||| ||||    
T  19231982 atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaa 19232081  T
Q  276 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||    
T  19232082 aatgatgatgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatg 19232164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 76 - 241
Target Start/End: Complemental strand, 2449404 - 2449238
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  2449404 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 2449305  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  2449304 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 2 - 278
Target Start/End: Complemental strand, 15859265 - 15858986
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||||||| ||||| |  |||| |||    
T  15859265 atacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattc 15859166  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| | ||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||    
T  15859165 accaattgagcacaattttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaaca 15859066  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaat 278  Q
    |||||||| ||||||||||| |||||||||||||| |||||| ||   ||||||||||||||| ||| |||||||||||||    
T  15859065 tatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacaattg-aaatttacaaaat 15858986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 51158259 - 51158008
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||    
T  51158259 atacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattc 51158160  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||    
T  51158159 accaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaaca 51158060  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaatt 251  Q
    |||||||| ||||||||||| |||||||||||||| |||||||| |||||||    
T  51158059 tatcatcacagttggagcacgaatttagcaacaattatccataagcaaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 195 - 315
Target Start/End: Complemental strand, 19260869 - 19260749
Alignment:
Q  195 aaacatatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgata 294  Q
    ||||||||||||| | || |||||| |||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaacttacaaaatgatgatgattatgata 19260770  T
Q  295 aagactaacccccttacctta 315  Q
    |||||||||||||||||||||    
T  19260769 aagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 15936854 - 15936634
Alignment:
Q  16 attcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcaca 113  Q
    |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||| ||||| | ||||| |||| | |||  |||||    
T  15936854 attcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcaca 15936755  T
Q  114 attttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 213  Q
    ||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| | |||||    
T  15936754 attttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttg 15936655  T
Q  214 gagcacaaatttagcaacaat 234  Q
    |||||| ||||||| ||||||    
T  15936654 gagcacgaatttagtaacaat 15936634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 109 - 241
Target Start/End: Complemental strand, 13975853 - 13975722
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||| |||||||||||||    
T  13975853 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa 13975755  T
Q  209 agttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||| |||||||||||||| ||||||    
T  13975754 agttggagcacgaatttagcaacaattatccat 13975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 15938696 - 15938476
Alignment:
Q  16 attcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcaca 113  Q
    |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||| ||||| | ||||| |||| | |||  |||||    
T  15938696 attcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcaca 15938597  T
Q  114 attttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 213  Q
    ||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| |||||||||||  |||||||||||||| | |||||    
T  15938596 attttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgattacaaacatatcattacagttg 15938497  T
Q  214 gagcacaaatttagcaacaat 234  Q
    ||||||  |||||| ||||||    
T  15938496 gagcacgtatttagtaacaat 15938476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 109 - 241
Target Start/End: Original strand, 45860937 - 45861068
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||| |||||||||||||    
T  45860937 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa 45861035  T
Q  209 agttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||| |||||||||||||| ||||||    
T  45861036 agttggagcacgaatttagcaacaattatccat 45861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 280 - 358
Target Start/End: Complemental strand, 15857198 - 15857120
Alignment:
Q  280 atgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  15857198 atgatgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcctatg 15857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 109 - 241
Target Start/End: Complemental strand, 13955021 - 13954890
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||  |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  13955021 gcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 13954923  T
Q  209 agttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||| |||||||||||||| ||||||    
T  13954922 agttggagcacgaatttagcaacaattatccat 13954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 3992873 - 3992948
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  3992873 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 3992948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 55513193 - 55513268
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  55513193 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 55513268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 2844514 - 2844589
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  2844514 atgattatgataaaaactaacccccttaccttaattatctcaaactattagctctagcttcacttttgctcctatg 2844589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 54038056 - 54037981
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| |||||| ||||||||||| |||||||||    
T  54038056 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatg 54037981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 316
Target Start/End: Original strand, 15614856 - 15615170
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||| | | ||| | ||| | ||| |  |||| |||    
T  15614856 atacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcccaaattaacaataacttagcaaaattc 15614955  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||| || |||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||| |    
T  15614956 accaattgagcaccatattcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatcaattcatgcatacaaata 15615055  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaaga 298  Q
    || || || |||  |||||||||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  ||||||||||||||||    
T  15615056 taacaccacagtaagagcacaaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatta-catgattatgataaaga 15615152  T
Q  299 ctaacccccttaccttaa 316  Q
    ||||||||||||||||||    
T  15615153 ctaacccccttaccttaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 17955916 - 17955837
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagct----ctagcttcactttagctcctatg 358  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    ||||||||||||| |||||||||    
T  17955916 atgattatgataaagactaacccccttaccttaattatctccaactattagctctacctagcttcacttttgctcctatg 17955837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 7854305 - 7854380
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||| |||||||||    
T  7854305 atgattatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatg 7854380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 45581954 - 45582016
Alignment:
Q  283 atgattatgataaagactaacccc-cttaccttaattatctccaactactagctctagcttca 344  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  45581954 atgattatgataaaaactaaccccccttaccttaattatctccaactattagctctagcttca 45582016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 55316351 - 55316471
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  55316351 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 55316450  T
Q  209 agttggagcacaaatttagca 229  Q
    ||   |||||| |||||||||    
T  55316451 agcaagagcacgaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 48 - 207
Target Start/End: Original strand, 16821207 - 16821369
Alignment:
Q  48 aacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattta 144  Q
    ||||||||||| ||| |||||| | ||||| ||||| ||||| |  |  ||||||| | |||| |||||||  ||||| |||  ||||| |||||||||     
T  16821207 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcatagcttaacatttttacatatttg 16821306  T
Q  145 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    |||||| ||| | ||||||||||||||| |||| ||||||| ||||||||||||||| |||||    
T  16821307 aacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacataacatca 16821369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 41270207 - 41270327
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| |||   |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  41270207 gcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 41270306  T
Q  209 agttggagcacaaatttagca 229  Q
    ||   |||||| |||||||||    
T  41270307 agcaagagcacgaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 17205019 - 17205076
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  17205019 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 17205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 356
Target Start/End: Complemental strand, 38810941 - 38810868
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||| ||  ||||||||||||||||| ||||| |||| | ||||| | |||||||||||||||||||    
T  38810941 atgattatgatgaattctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctccta 38810868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 356
Target Start/End: Original strand, 12031849 - 12031904
Alignment:
Q  301 aacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  12031849 aacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 12031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 356
Target Start/End: Complemental strand, 13301396 - 13301323
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  13301396 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13301323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 356
Target Start/End: Complemental strand, 13312052 - 13311979
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  13312052 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13311979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 14080715 - 14080756
Alignment:
Q  184 ttcatgcatacaaacatatcatcaaagttggagcacaaattt 225  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  14080715 ttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 17191879 - 17191936
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||||||||||||||| |||| | ||||| | | |||||||||||||||||    
T  17191879 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 17191936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 16261777 - 16261809
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  16261777 atgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 23492696 - 23492728
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  23492696 atgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 38168237 - 38168269
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  38168237 atgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 47984683 - 47984759
Alignment:
Q  13 atgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaac 89  Q
    ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||| | |||||| |||| |||||    
T  47984683 atgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatccaacaacaac 47984759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 48003257 - 48003333
Alignment:
Q  13 atgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaac 89  Q
    ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||| | |||||| |||| |||||    
T  48003257 atgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatccaacaacaac 48003333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 53771365 - 53771397
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  53771365 atgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 3576347 - 3576290
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||||||||||||||| | || | ||||| | |||||||||||| ||||||    
T  3576347 ctaacccccttaccttaattatcacaaattcctagcccaagcttcactttacctccta 3576290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 15550922 - 15550987
Alignment:
Q  284 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttta 349  Q
    |||||||||| ||  |||||||||||| |||||||||| |||| | ||||| | ||||||||||||    
T  15550922 tgattatgatgaattctaacccccttatcttaattatcaccaattcctagcccaagcttcacttta 15550987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 11986112 - 11986080
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  11986112 atgattatgatgaagactaacccccttacctta 11986080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 13954836 - 13954804
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||| |||||||||||||||||||||||    
T  13954836 atgattatggtaaagactaacccccttacctta 13954804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 14285289 - 14285321
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  14285289 atgattatgatgaagactaacccccttacctta 14285321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 19947026 - 19947058
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  19947026 atgattatgatgaagactaacccccttacctta 19947058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 30153265 - 30153297
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||| ||||||||||||||||||    
T  30153265 atgattatgataaaaactaacccccttacctta 30153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 33342204 - 33342236
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||||||||||||||| |||||||||    
T  33342204 atgattatgataaagactaaccctcttacctta 33342236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 45861122 - 45861154
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||| |||||||||||||||||||||||    
T  45861122 atgattatggtaaagactaacccccttacctta 45861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 47993970 - 47994046
Alignment:
Q  13 atgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaac 89  Q
    ||||||||||||| |||| ||| |||| || ||| ||||||||||| ||| |||||| | |||||| |||| |||||    
T  47993970 atgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatccaacaacaac 47994046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 48012543 - 48012619
Alignment:
Q  13 atgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaac 89  Q
    ||||||||||||| |||| ||| |||| || ||| ||||||||||| ||| |||||| | |||||| |||| |||||    
T  48012543 atgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatccaacaacaac 48012619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 51961063 - 51961031
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  51961063 atgattatgatgaagactaacccccttacctta 51961031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 22907455 - 22907214
Alignment:
Q  1 tatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattc 100  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22907455 tatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattc 22907356  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    |||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  22907355 atccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaaca 22907256  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    |||||||||||||||||||| |||||||||||||| ||||||    
T  22907255 tatcatcaaagttggagcacgaatttagcaacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 2 - 315
Target Start/End: Complemental strand, 16193957 - 16193643
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||| | ||||| | ||| ||||  || |||| |||    
T  16193957 atacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaattaacaacaatttggcaaaattc 16193858  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| |  |||||||||||||| |||| |||||||||||||||||||||    
T  16193857 accaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaattatcatcaattcatgcatacaaaca 16193758  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagac 299  Q
    |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  16193757 tatcatcatagttggagcacgaatttagcaacaatcatccataagcaaaattcatacaatatttgaaaatttaccaaatgatgatgattatgataaagac 16193658  T
Q  300 taacccccttacctta 315  Q
    ||| ||||||||||||    
T  16193657 taa-ccccttacctta 16193643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 14 - 358
Target Start/End: Complemental strand, 16405201 - 16404857
Alignment:
Q  14 tgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gca 111  Q
    |||||||||||||| |||||| |||| || ||| ||||||||||| ||||||||||||  |||||| |||   ||| |  |||| |||| | |||  |||    
T  16405201 tgattcatcaactaaaacatcaattaacaacaataacatcaattgaacaagaatcatatgtcaatttaac---aacttagcaaaattcaccaattgagca 16405105  T
Q  112 caattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 211  Q
    ||||||||| |||||  ||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  16405104 caattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagt 16405005  T
Q  212 tggagcacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 309  Q
    |||||||| |||||||||| ||| |||||| ||   |||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  16405004 tggagcacgaatttagcaataattatccatcatgcaaaaattcatacaacatttgaaaatttac-aaataatgatgattatgatgaagactaaccccctt 16404906  T
Q  310 accttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||    
T  16404905 accttaattatctccaactattagctctagcttcacttttgctcctatg 16404857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 315
Target Start/End: Complemental strand, 24929032 - 24928716
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattc 100  Q
    |||||||| | ||||||||||||  |||||||| |||| || | | ||| ||||||| ||||||  |||| |||||| |||| ||||| |  | ||||||    
T  24929032 atacccaagcaatgattcatcaatcacaacatcaattaacaaccataacctcaattgaacaagagacataactcaatccaaccacaacttagcgaaattc 24928933  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||    
T  24928932 accaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaaca 24928833  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaaga 298  Q
    ||| |||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  24928832 tataatcacagttggagcacgaatttagcaacaattatccataatcaaaattcatacaacatttgaaaatttcacaaaatgacgatgattatgataaaga 24928733  T
Q  299 ctaacccccttacctta 315  Q
    |||||||| ||||||||    
T  24928732 ctaaccccattacctta 24928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 76 - 241
Target Start/End: Original strand, 5238184 - 5238350
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  5238184 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 5238283  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  5238284 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 76 - 241
Target Start/End: Complemental strand, 24661414 - 24661248
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  24661414 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 24661315  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  24661314 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 2 - 315
Target Start/End: Complemental strand, 43373709 - 43373392
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | || |||||||||| |||||||| |||| || | | | ||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||    
T  43373709 atacccaagcaattattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattc 43373610  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||     
T  43373609 accaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattatcatcaattcatgcatacaaacg 43373510  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaag 297  Q
    |||||||| ||||||||||| |||||||||  ||| |||||| ||   |||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  43373509 tatcatcacagttggagcacgaatttagcattaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaag 43373410  T
Q  298 actaacccccttacctta 315  Q
    ||||||||||||||||||    
T  43373409 actaacccccttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 76 - 241
Target Start/End: Original strand, 43685643 - 43685809
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  43685643 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 43685742  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  43685743 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 241
Target Start/End: Original strand, 17345604 - 17345832
Alignment:
Q  14 tgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattc-atccattt-gca 111  Q
    |||||||||||| |||||||| |||| || ||| || ||||| || |||||||||||| ||||||||| | | ||| |  |||| || ||| |||  |||    
T  17345604 tgattcatcaacaacaacatcaattaacaacaataatatcaactgaacaagaatcataactcaattca-caataacttagcaaaatccatcaattgagca 17345702  T
Q  112 caattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 211  Q
    |||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||||||| ||||||| ||||| |||    
T  17345703 caattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatataaacataacatcacagt 17345802  T
Q  212 tggagcacaaatttagcaacaatcatccat 241  Q
    | |||||| ||||| |||||||| ||||||    
T  17345803 tagagcacgaatttcgcaacaattatccat 17345832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 274766 - 274841
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  274766 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 274841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 641083 - 641008
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  641083 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 641008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 826889 - 826814
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  826889 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 826814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 24716794 - 24716719
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  24716794 atgattatgataaagactaacccccttaccttaattatcaccaactattagctctagcttcacttttgctcctatg 24716719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 6774475 - 6774258
Alignment:
Q  14 tgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gca 111  Q
    |||||||||||| |||||||| | || || ||| |||||||||||  ||||||||| | ||||| | ||| | ||| |  |||| |||| | |||  |||    
T  6774475 tgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagca 6774376  T
Q  112 caattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 211  Q
    ||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||    
T  6774375 caattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagt 6774276  T
Q  212 tggagcacaaatttagca 229  Q
      |||||| ||| |||||    
T  6774275 aagagcacgaatctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 229
Target Start/End: Original strand, 24549004 - 24549233
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||| | | ||| | ||| | ||| |  |||| |||    
T  24549004 atacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcccaaattaacaataacttagcaaaattc 24549103  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||    
T  24549104 accaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaaca 24549203  T
Q  200 tatcatcaaagttggagcacaaatttagca 229  Q
    || ||||| |||  |||||| ||| |||||    
T  24549204 taacatcacagtaagagcacgaatctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 21844692 - 21844594
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||    
T  21844692 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 21844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 21852085 - 21851987
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    ||||||| |||||||||| |||||| |||||||||||||||  ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||    
T  21852085 gcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 21851987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 39115598 - 39115673
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    ||||||||||| || |||||| ||||||||||||||||  ||||||| |||||| ||||||||||| |||||||||    
T  39115598 atgattatgatgaaaactaacacccttaccttaattattaccaactattagctcaagcttcacttttgctcctatg 39115673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 30120854 - 30120974
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  || |||||||||||||||||||| |||||     
T  30120854 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcac 30120953  T
Q  209 agttggagcacaaatttagca 229  Q
    ||   |||||| |||||||||    
T  30120954 agcaagagcacgaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 16674512 - 16674392
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  || |||||||||||| ||||||| |||||     
T  16674512 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcac 16674413  T
Q  209 agttggagcacaaatttagca 229  Q
    ||   |||||| |||||||||    
T  16674412 agaaagagcacgaatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 17285543 - 17285600
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||||||||||||||| |||| | ||| | | |||||||||||||||||||    
T  17285543 ctaacccccttaccttaattatcaccaattcctaacccaagcttcactttagctccta 17285600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 21198062 - 21198005
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    |||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||||    
T  21198062 ctaacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 21198005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 23226117 - 23226076
Alignment:
Q  184 ttcatgcatacaaacatatcatcaaagttggagcacaaattt 225  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  23226117 ttcatgcatacaaacatatcatcatagttagagcacaaattt 23226076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 23837219 - 23837308
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 91  Q
    |||||||| | |||| |||||||| ||||||||  |||||| ||||||||||||||| ||| || || || | ||||||||| |||||||    
T  23837219 atacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaacaacat 23837308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 24385684 - 24385652
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  24385684 atgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 2545265 - 2545297
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  2545265 atgattatgatgaagactaacccccttacctta 2545297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 3431208 - 3431176
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  3431208 atgattatgatgaagactaacccccttacctta 3431176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 22886654 - 22886686
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  22886654 atgattatgattaagactaacccccttacctta 22886686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 26680222 - 26680463
Alignment:
Q  1 tatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattc 100  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26680222 tatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattc 26680321  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    ||| |||| |||||||||||||||||| |||||| |||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  26680322 atctattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaaca 26680421  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    |||||||||||||||||||| |||||||||||||| ||||||    
T  26680422 tatcatcaaagttggagcacgaatttagcaacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 2 - 358
Target Start/End: Complemental strand, 54118485 - 54118125
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| || |||  ||| ||||| |  |||| |||    
T  54118485 atacccaagcaatgattcatcaaccacaacatcaattaacaactataacatcaattgaacaagaatcataactaaatctaacaacaacttagcaaaattc 54118386  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| ||| || | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||    
T  54118385 accaattgagcacaattttcacaacttatcaattgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaaca 54118286  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaag 297  Q
    |||||||| | ||||||||| |||||||||||||| |||||| ||   ||||||||||||||||||||||||| ||||||| |||||||||||||| |||    
T  54118285 tatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaaaataatgatgattatgatgaag 54118186  T
Q  298 actaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||    
T  54118185 actaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatg 54118125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 109 - 315
Target Start/End: Original strand, 122020 - 122226
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  122020 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 122119  T
Q  209 agttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 308  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  122120 agttggagcacaaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatcccct 122219  T
Q  309 tacctta 315  Q
    |||||||    
T  122220 tacctta 122226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 2 - 315
Target Start/End: Original strand, 13246452 - 13246769
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||    
T  13246452 atacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattc 13246551  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| || ||||||||||||||||||    
T  13246552 accaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcattaattcatgcatacaaaca 13246651  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaag 297  Q
    |||||||| ||||| ||||| |||||| ||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13246652 tatcatcacagttgtagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaag 13246751  T
Q  298 actaacccccttacctta 315  Q
    ||||||||||||||||||    
T  13246752 actaacccccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 15675331 - 15675009
Alignment:
Q  1 tatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-tt 99  Q
    ||||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| ||    
T  15675331 tatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaatt 15675232  T
Q  100 catccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaac 198  Q
    || | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||    
T  15675231 caccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaac 15675132  T
Q  199 atatcatcaaagttggagcacaaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatga 292  Q
    ||||||||| ||||||||||| |||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    ||||||||||||||||    
T  15675131 atatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatga 15675032  T
Q  293 taaagactaacccccttacctta 315  Q
    | |||||||||||||||||||||    
T  15675031 tgaagactaacccccttacctta 15675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 76 - 241
Target Start/End: Original strand, 10488659 - 10488825
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  10488659 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 10488758  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  10488759 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 76 - 241
Target Start/End: Complemental strand, 16328092 - 16327926
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  16328092 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16327993  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  16327992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 44 - 315
Target Start/End: Complemental strand, 10104449 - 10104170
Alignment:
Q  44 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatat 141  Q
    ||||||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| ||||||     
T  10104449 caacaacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataa 10104350  T
Q  142 ttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatcca- 240  Q
    || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||     
T  10104349 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacggatttagcaacaattatccaa 10104250  T
Q  241 -taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaacccccttacctta 315  Q
     ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| |||||||||||||||||||||    
T  10104249 ttatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaacccccttacctta 10104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 31115650 - 31115865
Alignment:
Q  1 tatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaatt 99  Q
    ||||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| ||||||||||| ||||| | |  |||||    
T  31115650 tatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaacaacttaggaaaatt 31115749  T
Q  100 catccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaac 198  Q
    || | |||  ||| |||||||| |||||| ||||| |||||| |  |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||    
T  31115750 caccaattgagcataattttcacaacttcacatttttacataatggaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaac 31115849  T
Q  199 atatcatcaaagttgg 214  Q
    ||||||||| ||||||    
T  31115850 atatcatcacagttgg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 179 - 315
Target Start/End: Original strand, 33240901 - 33241043
Alignment:
Q  179 atcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa 276  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    
T  33240901 atcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaa 33241000  T
Q  277 ----atgatgatgattatgataaagactaacccccttacctta 315  Q
        ||||||||||||||||| |||||||||||||||||||||    
T  33241001 aatgatgatgatgattatgatgaagactaacccccttacctta 33241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 109 - 241
Target Start/End: Complemental strand, 13048353 - 13048221
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || ||||| |||||||||||||||||||||  |    
T  13048353 gcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcatacaaacatatcattga 13048254  T
Q  209 agttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||  |||||||||||||| ||||||    
T  13048253 agttggagcatgaatttagcaacaattatccat 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 25119139 - 25119064
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  25119139 atgattatgataaaaactaactcccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 25119064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 5682460 - 5682385
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||  |||||||||| |||||||||    
T  5682460 atgattatgataaaaactaacccacttaccttaattatcaccaactattagctcatgcttcacttttgctcctatg 5682385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 207
Target Start/End: Original strand, 10644287 - 10644449
Alignment:
Q  48 aacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattta 144  Q
    ||||||||||| ||| |||||| | ||||| ||||| ||||| |  |  ||||||| | |||| |||||||  |||||||||  ||||| |||||||||     
T  10644287 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttg 10644386  T
Q  145 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    |||||| ||| | || |||||||||||| |||| ||||||||||||||||||||||| |||||    
T  10644387 aacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatca 10644449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 315
Target Start/End: Original strand, 31132545 - 31132657
Alignment:
Q  209 agttggagcacaaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 302  Q
    ||||||||||| |||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    |||||||| |||||||| ||||||||    
T  31132545 agttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgataattatgatgaagactaa 31132644  T
Q  303 cccccttacctta 315  Q
    |||||||||||||    
T  31132645 cccccttacctta 31132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 356
Target Start/End: Complemental strand, 41165881 - 41165808
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||| ||  ||||||||||||| ||||||||| |||| | ||||| | |||||||||||||||||||    
T  41165881 atgattatgatgaattctaacccccttacgttaattatcaccaattcctagcccaagcttcactttagctccta 41165808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 111417 - 111493
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 78  Q
    |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||    
T  111417 atacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataactcaat 111493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 225
Target Start/End: Complemental strand, 40885753 - 40885570
Alignment:
Q  44 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacata- 140  Q
    ||||||||||||||| ||| |||||||| ||||||||||| | ||| |  |||| |||| | |||  ||| ||||| ||||||||  ||||| ||||||     
T  40885753 caacaacatcaattgaacatgaatcatatctcaattcaacaataacttagcaaagttcaccaattgagcataattt-cataacttgacatttatacatac 40885655  T
Q  141 tttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaattt 225  Q
    ||| |||||| ||| | |||||||| ||| || |||| | ||||||||||||||||||||| || || |||||||| || |||||    
T  40885654 tttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttggagtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 47357786 - 47357906
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  |||||| |||||||||||||||| |||||     
T  47357786 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaatccatgcatacaaacataacatcac 47357885  T
Q  209 agttggagcacaaatttagca 229  Q
    ||   |||||| |||||||||    
T  47357886 agcaagagcacgaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 41166172 - 41166083
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 91  Q
    |||||||| | ||||||||||||| ||||||||  |||||| ||||||||||||||| ||| || || |  | ||||||||| |||||||    
T  41166172 atacccaagccatgattcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttgccacaattcaacaacaacat 41166083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 47534990 - 47534933
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||||||||||||||| |||| | || || | |||||||||||||||||||    
T  47534990 ctaacccccttaccttaattatcaccaattcctcgcccaagcttcactttagctccta 47534933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 14952085 - 14952117
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  14952085 atgattatgataaagactaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 15135939 - 15135907
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  15135939 atgattatgataaagactaacccccttacctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 15272243 - 15272211
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  15272243 atgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 15044851 - 15044938
Alignment:
Q  4 acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 91  Q
    |||||| | |||| |||||| | ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  15044851 acccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 15044938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 8045272 - 8045304
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  8045272 atgattatgatgaagactaacccccttacctta 8045304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 13809711 - 13809647
Alignment:
Q  27 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 91  Q
    |||||||| ||||||| |||||||||||||||  || ||||| || | ||||||||| |||||||    
T  13809711 acaacatcaattagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacat 13809647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 16523146 - 16523178
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  16523146 atgattatgatgaagactaacccccttacctta 16523178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 109 - 358
Target Start/End: Original strand, 41394353 - 41394602
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||  | ||||||||||||||| |||| ||||||| |||||||||||||||||||||     
T  41394353 gcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcatcat 41394452  T
Q  209 agttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 308  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41394453 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 41394552  T
Q  309 taccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41394553 taccttaattatctccaactattagctctagcttcactttagctcctatg 41394602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 16 - 315
Target Start/End: Original strand, 20931381 - 20931682
Alignment:
Q  16 attcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcaca 113  Q
    |||||||||| |||||||| |||| || | | ||||||||||| |||||||||| | ||||| | ||| ||||  |  |||| |||| | |||| |||||    
T  20931381 attcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaattaacaacaatttagcaaaattcaccaatttagcaca 20931480  T
Q  114 attttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 213  Q
    ||||||||||||| |||||| ||||||| | |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||    
T  20931481 attttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttg 20931580  T
Q  214 gagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacct 313  Q
    |||||| |||||||||||||| |||||||| |||| ||||||||||| |||||||||| |||||||| |||||||||||||||| |||||||||||||||    
T  20931581 gagcacgaatttagcaacaattatccataagcaaacttcatacaacaattgaaaatttgcaaaatgaggatgattatgataaaggctaacccccttacct 20931680  T
Q  314 ta 315  Q
    ||    
T  20931681 ta 20931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 315
Target Start/End: Original strand, 20445701 - 20446019
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||||| | ||||||||| ||||| |  |||| |||    
T  20445701 atacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaattc 20445800  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  ||||||||||||  |||| |||||| | | || || |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||    
T  20445801 accaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaaca 20445900  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaa 296  Q
    |||||||| | ||||||||| |||||||||||||| |||||| ||   |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20445901 tatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaa 20446000  T
Q  297 gactaacccccttacctta 315  Q
    ||||||| |||||||||||    
T  20446001 gactaactcccttacctta 20446019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 109 - 315
Target Start/End: Original strand, 20913161 - 20913367
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    |||||||||||||||||| |||||| ||||||| | |||||| ||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  20913161 gcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 20913260  T
Q  209 agttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 308  Q
    ||||||||||| |||||||||||||| |||| ||| |||||||||||||||| |||||||||| |||||||| |||||||| ||||||||||||||||||    
T  20913261 agttggagcacgaatttagcaacaattatccgtaagcaaaattcatacaacaattgaaaatttgcaaaatgaggatgattacgataaagactaaccccct 20913360  T
Q  309 tacctta 315  Q
    |||||||    
T  20913361 tacctta 20913367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 2 - 315
Target Start/End: Complemental strand, 20893867 - 20893551
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||||| ||||||||||||| |||||||| |||| ||   | ||||||||||| ||||||||||||  |||||  ||| ||||| |  |||| |||    
T  20893867 atacccaaacaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataaatcaatctaacaacaacttagcaaaattc 20893768  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| |||| |||||||||||||||||||||    
T  20893767 accaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattatcatcaattcatgcatacaaaca 20893668  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaag 297  Q
    |||||||| ||||||||||  |||||||||||||| |||||| ||   ||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  20893667 tatcatcacagttggagcaagaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaa-ttacaaaatgatgatgattatgatgaag 20893569  T
Q  298 actaacccccttacctta 315  Q
    ||||||||||||||||||    
T  20893568 actaacccccttacctta 20893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 2 - 315
Target Start/End: Complemental strand, 37844692 - 37844374
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | |||| |||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||    
T  37844692 atacccaagcaatgactcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattc 37844593  T
Q  101 atccattt-gcacaattttca-taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaac 198  Q
    ||  |||  |||||||||||| ||  || |||||| | | || || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||    
T  37844592 attaattgagcacaattttcactattttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaac 37844493  T
Q  199 atatcatcaaagttggagcacaaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaa 296  Q
    ||||||||| ||||||||||  |||||||||||||| |||||| ||   ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37844492 atatcatcatagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaa 37844393  T
Q  297 gactaacccccttacctta 315  Q
    |||||||||||||||||||    
T  37844392 gactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 2 - 315
Target Start/End: Original strand, 20531466 - 20531783
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||||| | ||||||||| ||||| |  |||| |||    
T  20531466 atacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaattc 20531565  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  ||||||||||||  |||| |||||| | | || || |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||    
T  20531566 accaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaaca 20531665  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaag 297  Q
    ||| |||| | ||||||||| |||||||||||||| |||||| ||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20531666 tattatcacatttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaag 20531765  T
Q  298 actaacccccttacctta 315  Q
    |||||   ||||||||||    
T  20531766 actaatttccttacctta 20531783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 76 - 241
Target Start/End: Original strand, 51452589 - 51452755
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  51452589 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 51452688  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||    
T  51452689 tattatcaattcatgcatacaaacatatcatcaaagttgaagcacgaatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 21860334 - 21860409
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  21860334 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 21860409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 357
Target Start/End: Complemental strand, 44034903 - 44034829
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 357  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  44034903 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 44034829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 316
Target Start/End: Original strand, 45051554 - 45051759
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||| || |||||     
T  45051554 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac 45051653  T
Q  209 agttggagcacaaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 307  Q
    |||  || ||| ||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  |||||||||||||||||||||||||    
T  45051654 agtaagaacacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatca-catgattatgataaagactaaccccc 45051750  T
Q  308 ttaccttaa 316  Q
    |||||||||    
T  45051751 ttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 207
Target Start/End: Original strand, 2116386 - 2116484
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  2116386 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 2116484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 249 - 356
Target Start/End: Original strand, 27675086 - 27675191
Alignment:
Q  249 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 348  Q
    |||||||||||| |||||||||||||  |  |  | ||||||||||||  |||||||||||||||||||||||||||| | ||||| | |||||||||||    
T  27675086 attcatacaacaattgaaaatttacactaaaa--acgattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcacttt 27675183  T
Q  349 agctccta 356  Q
    ||||||||    
T  27675184 agctccta 27675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 41218728 - 41218803
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    ||||| ||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||| |||||||||    
T  41218728 atgatcatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatg 41218803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 110 - 191
Target Start/End: Original strand, 22227941 - 22228022
Alignment:
Q  110 cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 191  Q
    ||||||||||||||||| |||||| ||||||||| |||||| ||| | || |||||||||||| |||| |||||||||||||    
T  22227941 cacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgca 22228022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 110 - 191
Target Start/End: Original strand, 22232638 - 22232719
Alignment:
Q  110 cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 191  Q
    ||||||||||||||||| |||||| ||||||||| |||||| ||| | || |||||||||||| |||| |||||||||||||    
T  22232638 cacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgca 22232719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 18601238 - 18601140
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||    
T  18601238 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 18601140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 5072508 - 5072388
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||| ||||||| |||||     
T  5072508 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcac 5072409  T
Q  209 agttggagcacaaatttagca 229  Q
    ||   |||||| |||||||||    
T  5072408 agcaagagcacgaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 13376768 - 13376711
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||||||||||||||| |||| | ||||| | | |||||||||||||||||    
T  13376768 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 13376711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 20177513 - 20177570
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    |||||||| |||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  20177513 ctaaccccattaccttaattatcaccaattcctagcccaagcttcactttagctccta 20177570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 2116276 - 2116343
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatca 69  Q
    |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  |||||||||    
T  2116276 atacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatca 2116343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 314
Target Start/End: Complemental strand, 15861358 - 15861327
Alignment:
Q  283 atgattatgataaagactaacccccttacctt 314  Q
    ||||||||||||||||||||||||||||||||    
T  15861358 atgattatgataaagactaacccccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 51452809 - 51452841
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||| |||||||||||||||||||||||||    
T  51452809 atgattaagataaagactaacccccttacctta 51452841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 186; Significance: 1e-100; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 37307 - 37066
Alignment:
Q  1 tatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattc 100  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37307 tatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatccaactacaacatgtcaaattc 37208  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    |||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  37207 atccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaaca 37108  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    |||||||||||||||||||| |||||||||||||| ||||||    
T  37107 tatcatcaaagttggagcacgaatttagcaacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 41632 - 41707
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  41632 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 41707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 186; Significance: 1e-100; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 7293038 - 7293279
Alignment:
Q  1 tatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattc 100  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7293038 tatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaacaacaacatgtcaaattc 7293137  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    |||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||||||||||||||    
T  7293138 atccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattattaattcatgcatacaaaca 7293237  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    |||||||||||||||||||| |||||||||||||| ||||||    
T  7293238 tatcatcaaagttggagcacgaatttagcaacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 2 - 356
Target Start/End: Original strand, 3059988 - 3060344
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| |||||||| |||| ||   | ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||    
T  3059988 atacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaatctaacaacaacttaacaaaattc 3060087  T
Q  101 atccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaac 198  Q
    | |||||||  || |||||||| || || |||||| ||||||||| |||||| ||| | ||||||| |  |||| |||| ||||||| |||||||||||     
T  3060088 a-ccatttgagcataattttcacaatttatcatttttacatatttgaacatgtaatttcaccaacagtattacaattatcatcaattaatgcatacaaat 3060186  T
Q  199 atatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaaga 298  Q
    |||| |||| ||||||||||| |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3060187 atattatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatataacatttgaaaatttacaaaatgatgatgattatgataaaga 3060286  T
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    || ||||||||||||| |||||||||||||| |||||||||||||||||| |||||||    
T  3060287 cttacccccttaccttcattatctccaactattagctctagcttcacttttgctccta 3060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 2 - 315
Target Start/End: Original strand, 16211788 - 16212103
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | |||| |||||||| |||||||| |||| || | | ||||||||||  |||||||||| | ||||| | ||| ||||| |  |||| |||    
T  16211788 atacccaagcaatgaatcatcaaccacaacatcaattaacaaccataacatcaatttaacaagaatcaaatctcaaattaacaacaacttagcaaaattc 16211887  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | || ||||||| |||| |||| |||||||||||||||||||||    
T  16211888 accaattgagcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatcatcaattcatgcatacaaaca 16211987  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagac 299  Q
    |||||||| ||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  16211988 tatcatcacagttggagcacgaatttagcaacaattgtccataagcaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagac 16212087  T
Q  300 taacccccttacctta 315  Q
    ||||||||||||||||    
T  16212088 taacccccttacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 11580981 - 11580661
Alignment:
Q  1 tatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-tt 99  Q
    ||||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| ||    
T  11580981 tatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaatt 11580882  T
Q  100 catccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaac 198  Q
    || | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||    
T  11580881 caccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaac 11580782  T
Q  199 atatcatcaaagttggagcacaaatttagcaacaatcatccataat---caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgata 294  Q
    |||| |||| ||||||||||| |||||||||| ||| |||||| ||    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11580781 atattatcacagttggagcacgaatttagcaataattatccattatgcaaaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgata 11580682  T
Q  295 aagactaacccccttacctta 315  Q
    |||||||| ||||||||||||    
T  11580681 aagactaatccccttacctta 11580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 2 - 315
Target Start/End: Complemental strand, 13037255 - 13036938
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| |||||||| ||||  ||  | ||||| ||||| |||||||||||| ||||||  ||| ||||| |  |||| |||    
T  13037255 atacccaagcaatgattcatcaaccacaacatcaattaatattcataacattaattgaacaagaatcataactcaatctaacaacaacttagcaaaattc 13037156  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| |||| |||||||||||||||||||||    
T  13037155 accaattgagcacaattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattatcatcaattcatgcatacaaaca 13037056  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaag 297  Q
    |||||||| ||||||||||| |||||||||||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  13037055 tatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatggtgaag 13036956  T
Q  298 actaacccccttacctta 315  Q
    ||||||||||||||||||    
T  13036955 actaacccccttacctta 13036938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 2 - 315
Target Start/End: Original strand, 36052689 - 36053003
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | || |||||||||| |||||||| |||| || | ||||||||||||| |||||||||| | ||||| | |||   ||| |  |||| |||    
T  36052689 atacccaagcaattattcatcaaccacaacatcaattaacaaccacaacatcaattgaacaagaatcaaatctcaaattaac---aacttagcaaaattc 36052785  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||     
T  36052786 accaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattatcatcaattcatgcatacaaacg 36052885  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaag 297  Q
    |||||||| |||||||| | ||||||||||||||| |||||| ||   |||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  36052886 tatcatcacagttggagtataaatttagcaacaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaag 36052985  T
Q  298 actaacccccttacctta 315  Q
    ||||||||||||||||||    
T  36052986 actaacccccttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 76 - 241
Target Start/End: Original strand, 11516324 - 11516490
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  11516324 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 11516423  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  11516424 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 76 - 241
Target Start/End: Complemental strand, 15441730 - 15441564
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  15441730 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 15441631  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  15441630 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 76 - 241
Target Start/End: Complemental strand, 30262295 - 30262129
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  30262295 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 30262196  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  30262195 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 47481272 - 47481031
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| | |||||| ||||  | | | ||||||||||| |||||||||||| ||||||||||| ||||| |  |||| |||    
T  47481272 atacccaagcaatgattcatcaacaaaaacatcaattaagagcgataacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattc 47481173  T
Q  101 atccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaac 198  Q
    | ||| |||  ||||||||||| ||||| |||||| ||||||||| |||||| ||| | || |||||||||||| |||| ||||||||||||||||||||    
T  47481172 a-ccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaac 47481074  T
Q  199 atatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||| ||||| |||| |||||| |||||||||||||| ||||||    
T  47481073 ataacatcacagttagagcacgaatttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 18254062 - 18253842
Alignment:
Q  16 attcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcaca 113  Q
    |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||    
T  18254062 attcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcaca 18253963  T
Q  114 attttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 213  Q
    ||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| | |||||    
T  18253962 attttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttg 18253863  T
Q  214 gagcacaaatttagcaacaat 234  Q
    |||||| ||||||| ||||||    
T  18253862 gagcacgaatttagtaacaat 18253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 109 - 241
Target Start/End: Complemental strand, 25292470 - 25292338
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||| ||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || | |||||||| |||||||||||||||||||    
T  25292470 gcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaa 25292371  T
Q  209 agttggagcacaaatttagcaacaatcatccat 241  Q
    |||||||||||||||||||||||||| ||||||    
T  25292370 agttggagcacaaatttagcaacaattatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 13321047 - 13321278
Alignment:
Q  13 atgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaacta-caacatgtcaaa-ttcatccattt-g 109  Q
    ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| ||||||||||| | |||| |  |||| |||| | |||  |    
T  13321047 atgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaatcaacttagcaaaattcaccaattgag 13321146  T
Q  110 cacaattttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    |||||||| ||||||||  ||||| |||||| ||  ||||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  13321147 cacaattt-cataacttgacatttatacatactttgaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 13321245  T
Q  208 aagttggagcacaaatttagcaacaatcatcca 240  Q
     |||| |||||| |||||||||||||| |||||    
T  13321246 cagttagagcacgaatttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 32493978 - 32493903
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  32493978 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 32493903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 206
Target Start/End: Complemental strand, 16479082 - 16478985
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatc 206  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||    
T  16479082 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatc 16478985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 126738 - 126813
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||||||||    
T  126738 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctaacttcatttttgctcctatg 126813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 207
Target Start/End: Original strand, 13572808 - 13572906
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||| ||| | || ||||||||||||||||||||||| |||||    
T  13572808 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatca 13572906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 1936949 - 1936874
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| || ||||||||||||||| ||| |||||    
T  1936949 atgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcacttttgcttctatg 1936874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 111201 - 111126
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||  |||||| ||||||||||| |||||||||    
T  111201 atgattatgatgaaaactaacccccttaccttaattatcaccaacttttagctcaagcttcacttttgctcctatg 111126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 296094 - 295893
Alignment:
Q  113 aattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagtt 212  Q
    |||||| |||||||||||||| |||||| || |||||| ||| | |||||||||||||   |||| ||| ||||||||| ||||||||| || |  | ||    
T  296094 aatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaatt 295995  T
Q  213 ggagcacaaatttagcaacaatcatccataat-caaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctta 310  Q
     || ||| |||||||||||||| || ||| || ||||| |||||||||  |||||||||  | ||||||||||  |||||| | ||||| ||||||||||    
T  295994 agaacacgaatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaatgca-aaaatgatgagaattatgttgaagacaaaccccctta 295896  T
Q  311 cct 313  Q
    |||    
T  295895 cct 295893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 10989541 - 10989661
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  10989541 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 10989640  T
Q  209 agttggagcacaaatttagca 229  Q
    ||   |||||| |||||||||    
T  10989641 agcaagagcacgaatttagca 10989661  T

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Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 356
Target Start/End: Original strand, 13377819 - 13377924
Alignment:
Q  249 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 348  Q
    |||||||||||| |||||||||||||  |  |  ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | |||||||||||    
T  13377819 attcatacaacaattgaaaatttacactaaaa--atgattatgatgaattctaacccccttaccttaattatcaccaattcctagcccaagcttcacttt 13377916  T
Q  349 agctccta 356  Q
    ||||||||    
T  13377917 agctccta 13377924  T

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Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 358
Target Start/End: Complemental strand, 7283987 - 7283913
Alignment:
Q  284 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||| || |||||||||||||||||||||||| |||| || || ||| ||||||||||| |||||||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcctatg 7283913  T

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Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 13911136 - 13911046
Alignment:
Q  117 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  13911136 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatca 13911046  T

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Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 2437590 - 2437687
Alignment:
Q  110 cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    |||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||    
T  2437590 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 2437687  T

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Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 13389693 - 13389750
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  13389693 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13389750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 241
Target Start/End: Complemental strand, 14114031 - 14113989
Alignment:
Q  199 atatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  14114031 atatcatcaaagttggagcacgaatttagcaacaattatccat 14113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 241
Target Start/End: Complemental strand, 14423681 - 14423639
Alignment:
Q  199 atatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  14423681 atatcatcaaagttggagcacgaatttagcaacaattatccat 14423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 2029244 - 2029276
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  2029244 atgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 315
Target Start/End: Original strand, 15709428 - 15709501
Alignment:
Q  246 aaaattcatacaacatttgaaaatttacaaaat----gatgatgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| ||||||||||| || ||||||    ||||||||||||||| |||||||| || |||||||||    
T  15709428 aaaattcataccacatttgaaaaattgcaaaattgatgatgatgattatgatgaagactaatcctcttacctta 15709501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 356
Target Start/End: Original strand, 16919870 - 16919926
Alignment:
Q  300 taacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||||    
T  16919870 taacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 16919926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 42056220 - 42056188
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  42056220 atgattatgataaagactaacccccttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 371417 - 371449
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  371417 atgattatgatgaagactaacccccttacctta 371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 3049905 - 3049937
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||| ||||||||||||||||||    
T  3049905 atgattatgataaaaactaacccccttacctta 3049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 13321334 - 13321366
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  13321334 atgattatgatgaagactaacccccttacctta 13321366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 311
Target Start/End: Complemental strand, 15516793 - 15516765
Alignment:
Q  283 atgattatgataaagactaacccccttac 311  Q
    |||||||||||||||||||||||||||||    
T  15516793 atgattatgataaagactaacccccttac 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 25124450 - 25124482
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  25124450 atgattatgatgaagactaacccccttacctta 25124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 47480976 - 47480944
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  47480976 atgattatgatgaagactaacccccttacctta 47480944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 166; Significance: 9e-89; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 2 - 358
Target Start/End: Complemental strand, 19794945 - 19794586
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||||| |||||| |||| |   || ||||||||||| |||||||||||| ||||||||||| ||||| |  |||| |||    
T  19794945 atacccaagcaatgattcatcaactataacatcaattaacggaaataacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattc 19794846  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  19794845 accaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatacaaaca 19794746  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaag 297  Q
    |||||||| ||||||||||| |||||| | ||||| |||||| ||   |||||||||||||||||||||| |||||||||| |||||||||||||| |||    
T  19794745 tatcatcacagttggagcacgaatttaacgacaattatccattatgcaaaaattcatacaacatttgaaa-tttacaaaataatgatgattatgatgaag 19794647  T
Q  298 actaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||    
T  19794646 actaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatg 19794586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 14 - 358
Target Start/End: Complemental strand, 43643186 - 43642838
Alignment:
Q  14 tgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaac-atgtcaaattcatccattt-gca 111  Q
    ||||||||||||||||||||| |||| || ||| | ||||||||| |||||||||||| ||||| | ||  ||||| | |  ||||||| | |||  |||    
T  43643186 tgattcatcaactacaacatcaattaacagcaatagcatcaattgaacaagaatcatatctcaaattaataacaactaagaaaaattcaccaattgagca 43643087  T
Q  112 caattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 211  Q
    ||||||||| |||||  ||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| | |    
T  43643086 caattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaat 43642987  T
Q  212 tggagcacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 309  Q
    ||||||||||||||||||||||| |||||  ||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  43642986 tggagcacaaatttagcaacaattatccactatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaacctcctt 43642887  T
Q  310 accttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
     ||||||||||||||||||| |||||||||||||||||| |||||||||    
T  43642886 cccttaattatctccaactattagctctagcttcacttttgctcctatg 43642838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 2 - 358
Target Start/End: Complemental strand, 20627554 - 20627195
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| |||||| | |||| || | | || |||||||| |||||||| | | ||||| | ||| ||||| |  |||| |||    
T  20627554 atacccaagcaatgattcatcaaccacaacaccaattaacaaccataaaatcaattgaacaagaattaaatctcaaattaacaacaacttaacaaaattc 20627455  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| || || |||||| |||||||||  ||||| ||| | ||||||||||||||| |||| |||||||| ||||||||||||    
T  20627454 accaattgagcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaattatcatcaattcgtgcatacaaaca 20627355  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaa-tttacaaaatgatgatgattatgataaaga 298  Q
    |||||||| ||||||||||| |||||| ||||||| ||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  20627354 tatcatcacagttggagcacgaatttaacaacaattatccataatcataattcatacaatatttgaaaattttacaaaatgatgatgattatgataaaga 20627255  T
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  20627254 ctaaccccgttaccttaattatctccaactattagctctagcttcacttttgctcctatg 20627195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 2 - 315
Target Start/End: Complemental strand, 36982682 - 36982364
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||||| ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| ||||||||||| ||||| || |||| |||    
T  36982682 atacccaaacaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacaggaatcataactcaattcaacaacaacttggcaaaattc 36982583  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||| ||||| |||| |||| ||||||||||| |||||||||    
T  36982582 accaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaattatcatcaattcatgaatacaaaca 36982483  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaa 296  Q
    |||||||| ||||||||||| |||||||||||||| |||||| ||   |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  36982482 tatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgataaa 36982383  T
Q  297 gactaacccccttacctta 315  Q
    |||||||||||||||||||    
T  36982382 gactaacccccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 2 - 315
Target Start/End: Original strand, 462760 - 463075
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||  || ||||| |||| || | | ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||    
T  462760 atacccaagcaatgattcatcaatcacgacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattc 462859  T
Q  101 atccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaac 198  Q
    | ||| |||  ||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||||||||||||||||||     
T  462860 a-ccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaat 462958  T
Q  199 atatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaaga 298  Q
    ||||||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  462959 atatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaaga 463058  T
Q  299 ctaacccccttacctta 315  Q
    |||||||||||||||||    
T  463059 ctaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 2 - 315
Target Start/End: Original strand, 8891264 - 8891581
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| |||||||| ||||  | | | ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||    
T  8891264 atacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattc 8891363  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| |  |||||||||||||| |||| |||||||||||||||||||||    
T  8891364 accaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaattatcatcaattcatgcatacaaaca 8891463  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaag 297  Q
    ||| |||| ||||||||||| |||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8891464 tattatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaag 8891563  T
Q  298 actaacccccttacctta 315  Q
    ||||||||| ||||||||    
T  8891564 actaacccctttacctta 8891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 76 - 241
Target Start/End: Complemental strand, 19689567 - 19689401
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  19689567 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 19689468  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  19689467 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 76 - 241
Target Start/End: Original strand, 23820168 - 23820334
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  23820168 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 23820267  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  23820268 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 76 - 241
Target Start/End: Complemental strand, 14906606 - 14906440
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  14906606 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 14906507  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  14906506 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 76 - 241
Target Start/End: Original strand, 20015108 - 20015274
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||| ||| |    
T  20015108 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaat 20015207  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  20015208 tattatcaattcatgcatgcaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 24341631 - 24341309
Alignment:
Q  1 tatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-tt 99  Q
    ||||||||| | |||||||||||||   |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| ||    
T  24341631 tatacccaagcaatgattcatcaacaggaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaatt 24341532  T
Q  100 catccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaac 198  Q
    || | |||  |||||||||||| |||||| ||||| |||||| || |||||  ||| | ||||||||||||||| |||| ||||||||||||||||||||    
T  24341531 caccaattgagcacaattttcacaacttcacatttttacataattgaacatataatttcaccaacaatcatacaattatcatcaattcatgcatacaaac 24341432  T
Q  199 atatcatcaaagttggagcacaaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatga 292  Q
    ||||||||| ||||| ||||  |||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    ||||||||||||||||    
T  24341431 atatcatcacagttgaagcatgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatga 24341332  T
Q  293 taaagactaacccccttacctta 315  Q
    | |||||||||||||||||||||    
T  24341331 tgaagactaacccccttacctta 24341309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 25265631 - 25265390
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||| ||| |||||||| |||| || ||||||||||||||| ||| |  ||  | |  |||||||| |||||||  |||| |||    
T  25265631 atacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaacatagcaaaattc 25265532  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||    
T  25265531 accaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaaca 25265432  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    || |||||||||| |||||| |||||||||||||| ||||||    
T  25265431 taacatcaaagttagagcacgaatttagcaacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 109 - 241
Target Start/End: Complemental strand, 17396784 - 17396653
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| ||| | ||||||||||||||| | || | |||||||||||||| |||||||||||||    
T  17396784 gcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa 17396686  T
Q  209 agttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||| |||||||||||||| ||||||    
T  17396685 agttggagcacgaatttagcaacaattatccat 17396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 221 - 315
Target Start/End: Original strand, 22863171 - 22863267
Alignment:
Q  221 aatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||| |||||| ||   ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22863171 aatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 22275045 - 22275120
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  22275045 atgattatgataaaggctaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 22275120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 22284278 - 22284353
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||    
T  22284278 atgattatgataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatg 22284353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 284 - 358
Target Start/End: Original strand, 15633538 - 15633612
Alignment:
Q  284 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| |||||||||    
T  15633538 tgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcctatg 15633612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 191
Target Start/End: Complemental strand, 7508073 - 7507894
Alignment:
Q  14 tgattcatcaactacaacatctattagcatcaacaacatcaattgca-caagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg-- 109  Q
    |||||||||||| |||||||| | || || ||| ||||||||||  | || |||||||| ||||||| ||| ||||| | | |||||||| ||| |||      
T  7508073 tgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaatt-aacaacaacttagccaaattca-ccaattgaa 7507976  T
Q  110 cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 191  Q
    ||||||||||||||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
T  7507975 cacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 43646232 - 43646289
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  43646232 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 43646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 19886781 - 19886661
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||| ||| || | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||     
T  19886781 gcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 19886682  T
Q  209 agttggagcacaaatttagca 229  Q
    ||   |||||| |||||||||    
T  19886681 agcaagagcacgaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 316
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaa 316  Q
    ||||||||||||||||||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 9652828 - 9652796
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  9652828 atgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 356
Target Start/End: Original strand, 19660221 - 19660273
Alignment:
Q  304 ccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    |||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  19660221 ccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 19660273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 314
Target Start/End: Original strand, 25213372 - 25213403
Alignment:
Q  283 atgattatgataaagactaacccccttacctt 314  Q
    ||||||||||||||||||||||||||||||||    
T  25213372 atgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 356
Target Start/End: Original strand, 19666848 - 19666921
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | | |||||||||||||||||    
T  19666848 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaaacttcactttagctccta 19666921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 25305769 - 25305826
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||| ||||||    
T  25305769 ctaacccccttaccttaattatcaccaattcatagcccaagcttcactttaactccta 25305826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 356
Target Start/End: Complemental strand, 31146138 - 31146032
Alignment:
Q  249 attcatacaaca-tttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactt 347  Q
    |||||||||||| |||||||||||||| ||  | |||||||||||| ||  ||||||||||||||||| |||  || |    ||||| | ||||||||||    
T  31146138 attcatacaacaatttgaaaatttacacaa--aagatgattatgatgaattctaacccccttaccttagttagatcaattctctagcccaagcttcactt 31146041  T
Q  348 tagctccta 356  Q
    |||||||||    
T  31146040 tagctccta 31146032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 7507789 - 7507757
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  7507789 atgattatgatgaagactaacccccttacctta 7507757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 17396599 - 17396567
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||| |||||||||||||||||||||||    
T  17396599 atgattatggtaaagactaacccccttacctta 17396567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 20015328 - 20015360
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||| |||||||||||||||||||||||||||    
T  20015328 atgatcatgataaagactaacccccttacctta 20015360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 24884718 - 24884762
Alignment:
Q  13 atgattcatcaactacaacatctattagcatcaacaacatcaatt 57  Q
    |||| |||||||| |||| ||||||||||| ||||||||||||||    
T  24884718 atgaatcatcaacaacaatatctattagcaacaacaacatcaatt 24884762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 28031166 - 28031134
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  28031166 atgattatgatgaagactaacccccttacctta 28031134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 33128372 - 33128404
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  33128372 atgattatgatgaagactaacccccttacctta 33128404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 153; Significance: 5e-81; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 13 - 315
Target Start/End: Original strand, 171938 - 172242
Alignment:
Q  13 atgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gc 110  Q
    ||||||||||||| |||||||| |||| || | | ||||||||||| ||||||||| || ||||||||||| ||||| |  |||| |||| | |||| ||    
T  171938 atgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaacttagcaaaattcaccaatttagc 172037  T
Q  111 acaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaag 210  Q
    |||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| |||||||||| |||||||||||||||||| ||    
T  172038 acaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacag 172137  T
Q  211 ttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctta 310  Q
    |||||||||  ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  172138 ttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctta 172237  T
Q  311 cctta 315  Q
    |||||    
T  172238 cctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 13 - 315
Target Start/End: Original strand, 177641 - 177945
Alignment:
Q  13 atgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gc 110  Q
    ||||||||||||| |||||||| |||| || | | ||||||||||| ||||||||| || ||||||||||| ||||| |  |||| |||| | |||| ||    
T  177641 atgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaacttagcaaaattcaccaatttagc 177740  T
Q  111 acaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaag 210  Q
    |||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| |||||||||| |||||||||||||||||| ||    
T  177741 acaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacag 177840  T
Q  211 ttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctta 310  Q
    |||||||||  ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  177841 ttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctta 177940  T
Q  311 cctta 315  Q
    |||||    
T  177941 cctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 152; Significance: 2e-80; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 2 - 315
Target Start/End: Original strand, 48620 - 48935
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| |||||||| ||||  | | | ||||||||||| |||||||||||| ||||||  | | ||||| |  |||| |||    
T  48620 atacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataactcaatctagcaacaacttagcaaaattc 48719  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | | |  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||    
T  48720 accaactgagcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaaca 48819  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagac 299  Q
    |||||||| ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48820 tatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagac 48919  T
Q  300 taacccccttacctta 315  Q
    ||||||||||||||||    
T  48920 taacccccttacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 207
Target Start/End: Original strand, 36225 - 36323
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    ||||||| |||||||||| |||||| | ||||| | || ||| ||| | |||||||||||||||  ||  |||||||||| |||||||||||| |||||    
T  36225 gcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacatacaaacataacatca 36323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 61154 - 61122
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  61154 atgattatgatgaagactaacccccttacctta 61122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 151; Significance: 8e-80; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 16 - 315
Target Start/End: Original strand, 1160 - 1462
Alignment:
Q  16 attcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcaca 113  Q
    |||||||||| |||| ||| |||| || | | ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||    
T  1160 attcatcaaccacaatatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcaca 1259  T
Q  114 attttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 213  Q
    ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  1260 attttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatactaacatatcatcaaagttg 1359  T
Q  214 gagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaacccccttacc 312  Q
    |||||| |||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1360 gagcacgaatttagcaacaattatccataagaaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaagactaacccccttacc 1459  T
Q  313 tta 315  Q
    |||    
T  1460 tta 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 2 - 315
Target Start/End: Complemental strand, 3823 - 3508
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattca 101  Q
    |||||||| | || |||| ||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |      
T  3823 atacccaagcaattattcctcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattt 3724  T
Q  102 tccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
     ||| |||  ||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||    
T  3723 accaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaaca 3624  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagac 299  Q
    |||||||| ||||||||||| |||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||    
T  3623 tatcatcacagttggagcacgaatttagcaacaattatctataatcaaaattcatacaacttttgaaaatttacaaaatgaagatgattatgacaaagac 3524  T
Q  300 taacccccttacctta 315  Q
    ||||||||||||||||    
T  3523 taacccccttacctta 3508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 145; Significance: 3e-76; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 2 - 312
Target Start/End: Original strand, 19228 - 19543
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||    
T  19228 atacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaattc 19327  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||||||||||||||||||||    
T  19328 accaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaaca 19427  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaa 296  Q
    |||||||| ||||||||||| |||||||||||||| |||||| ||   |||||||||||||||||||||||||||| ||||| |||||||||||||| ||    
T  19428 tatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaaattatgatgattatgatgaa 19527  T
Q  297 gactaacccccttacc 312  Q
    ||||||||||||||||    
T  19528 gactaacccccttacc 19543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 2 - 241
Target Start/End: Original strand, 21312 - 21553
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||    
T  21312 atacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaattc 21411  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||||||||||||||||||||    
T  21412 accaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaaca 21511  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    |||||||| ||||||||||| |||||||||||||| ||||||    
T  21512 tatcatcacagttggagcacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 2 - 315
Target Start/End: Original strand, 41751 - 42066
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||| |||||||| | |||| || | | | ||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||    
T  41751 atacccaaccaatgattcatcatctacaacaacaattaacagccatagcatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattc 41850  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| || || |||||| ||||||||| | |||| ||| | |||||||||   ||| |||| |||||||||||||||||||||    
T  41851 accaattgagcacaattttcacaaattatcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatcaattcatgcatacaaaca 41950  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagac 299  Q
    |||||||| ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41951 tatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagac 42050  T
Q  300 taacccccttacctta 315  Q
     |||||||||||||||    
T  42051 caacccccttacctta 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 140; Significance: 3e-73; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 2 - 316
Target Start/End: Complemental strand, 37154 - 36836
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| |||||||| |||| || | | ||| ||||||| |||||| ||||| |||||| |||| ||||| |  |||| |||    
T  37154 atacccaagcaatgattcatcaaccacaacatcaattaacagccataacgtcaattgaacaagattcataactcaatccaaccacaacttagcaaaattc 37055  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||| | |||| |||| |||||||||||||||||||||    
T  37054 accaatttagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattatcatcaattcatgcatacaaaca 36955  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaag 297  Q
    |||||||| ||||||||||| |||||| ||||||| |||||| ||   |||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  36954 tatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaag 36855  T
Q  298 actaacccccttaccttaa 316  Q
    |||||||||||||||||||    
T  36854 actaacccccttaccttaa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 284 - 358
Target Start/End: Complemental strand, 15398 - 15324
Alignment:
Q  284 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||| |||| | ||||||||||| |||||||||    
T  15398 tgattatgatgaatgctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcctatg 15324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 3e-73; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 2 - 315
Target Start/End: Original strand, 23506987 - 23507302
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | || |||||||||| |||||||| |||| || | | ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||    
T  23506987 atacccaagcaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattc 23507086  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||    
T  23507087 accaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaaca 23507186  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagac 299  Q
    |||||||| |  |||||||| |||||||||||||| |||||||| |||||||||||||||||||||||  ||||||||||  ||||||||||||||||||    
T  23507187 tatcatcacaaatggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaatcttacaaaatggagatgattatgataaagac 23507286  T
Q  300 taacccccttacctta 315  Q
    ||||||||||||||||    
T  23507287 taacccccttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 13 - 315
Target Start/End: Complemental strand, 27182777 - 27182471
Alignment:
Q  13 atgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gc 110  Q
    ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  ||    
T  27182777 atgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagc 27182678  T
Q  111 acaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaag 210  Q
    |||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| |||| |||| |||||||||||||||||||||||| ||    
T  27182677 acaattttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaattatcatcagttcatgcatacaaacatatcatcacag 27182578  T
Q  211 ttggagcacaaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 308  Q
    ||||||||  |||||||||||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27182577 ttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaaccccct 27182478  T
Q  309 tacctta 315  Q
    |||||||    
T  27182477 tacctta 27182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 13 - 315
Target Start/End: Complemental strand, 18531297 - 18530988
Alignment:
Q  13 atgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccatttg-- 109  Q
    ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| ||| |||      
T  18531297 atgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattca-ccaattgaa 18531199  T
Q  110 cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa 209  Q
    ||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |    
T  18531198 cacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcaca 18531099  T
Q  210 gttggagcacaaatttagcaacaatcatcc-ataatcaaa-attcatacaacatttgaaaatttacaaaatgatgat---gattatgataaagactaacc 304  Q
    |||||||||| |||||||||||||| |||| || || ||| |||||||| ||||||||||| || ||||||||||||   ||||||||| ||||||||||    
T  18531098 gttggagcacgaatttagcaacaattatccaattatgaaacattcataccacatttgaaaaattgcaaaatgatgatgacgattatgatgaagactaacc 18530999  T
Q  305 cccttacctta 315  Q
    |||||||||||    
T  18530998 cccttacctta 18530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 76 - 241
Target Start/End: Original strand, 20623066 - 20623232
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  20623066 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 20623165  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  20623166 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 76 - 241
Target Start/End: Complemental strand, 21233694 - 21233528
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
T  21233694 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 21233595  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  21233594 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 4 - 315
Target Start/End: Complemental strand, 22054072 - 22053753
Alignment:
Q  4 acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcat 102  Q
    |||||| | ||||||||||||| |||||||| |||| || ||| ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| ||||     
T  22054072 acccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcac 22053973  T
Q  103 ccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 201  Q
    | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | |||||||||||||||  ||| |||||||||| ||||||||||||    
T  22053972 caattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaactatcatcaattcatacatacaaacata 22053873  T
Q  202 tcatcaaagttggagcacaaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataa 295  Q
    |||||| ||||||||||| |||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    ||||||||||||||||| |    
T  22053872 tcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaatttcaaaaatgatgatgatgattatgatga 22053773  T
Q  296 agactaacccccttacctta 315  Q
    ||||||||||||||||||||    
T  22053772 agactaacccccttacctta 22053753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 79 - 241
Target Start/End: Original strand, 37052844 - 37053007
Alignment:
Q  79 tcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 177  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||| ||||||||||||||||| ||||    
T  37052844 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattat 37052943  T
Q  178 tatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  37052944 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 76 - 241
Target Start/End: Original strand, 16536294 - 16536460
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  16536294 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16536393  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  16536394 tattataaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 76 - 239
Target Start/End: Complemental strand, 25900571 - 25900408
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||  ||| ||||||||||||||||| |    
T  25900571 aattcaacaacaacatgtcaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaat 25900473  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatcc 239  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  25900472 tatcatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 14 - 241
Target Start/End: Original strand, 34939312 - 34939540
Alignment:
Q  14 tgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattc-atccattt-gca 111  Q
    |||||||||||| |||||||| |||| || ||| |||||||| || |||||||||||| ||||||||| | |  || |  |||| || ||| |||  |||    
T  34939312 tgattcatcaacaacaacatcaattaacagcaataacatcaactgaacaagaatcataactcaattca-caatgacttagcaaaatccatcaattgagca 34939410  T
Q  112 caattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 211  Q
    |||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||    
T  34939411 caattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagt 34939510  T
Q  212 tggagcacaaatttagcaacaatcatccat 241  Q
    | |||||| |||||||||||| | ||||||    
T  34939511 tagagcacgaatttagcaacagttatccat 34939540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 29188404 - 29188284
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  29188404 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 29188305  T
Q  209 agttggagcacaaatttagca 229  Q
    |||  |||||| ||| |||||    
T  29188304 agtaagagcacgaatctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 27009975 - 27010071
Alignment:
Q  111 acaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    ||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||| ||||||| | || ||||||||||||||||||||||| |||||    
T  27009975 acaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatca 27010071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 48 - 207
Target Start/End: Complemental strand, 4200169 - 4200007
Alignment:
Q  48 aacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattta 144  Q
    ||||||||||| ||| |||||| | ||||| ||||| |||||||  |  ||||||| | |||| ||| ||| |||||||||| |||||| | ||||| |     
T  4200169 aacatcaattgaacatgaatcacatctcaaatcaacaacaacataagagaaattcaccaatttagcataatattcataacttatcatttttgcatatatg 4200070  T
Q  145 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||    
T  4200069 aacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 4200007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 358
Target Start/End: Original strand, 11584374 - 11584448
Alignment:
Q  284 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||| ||  ||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||||||    
T  11584374 tgattatgatgaattctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 11584448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 43443515 - 43443417
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||    
T  43443515 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 43443417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 19500031 - 19500151
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||     
T  19500031 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 19500130  T
Q  209 agttggagcacaaatttagca 229  Q
    ||   |||||| |||||||||    
T  19500131 agcaagagcacgaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 22366601 - 22366481
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||     
T  22366601 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 22366502  T
Q  209 agttggagcacaaatttagca 229  Q
    ||   |||||| |||||||||    
T  22366501 agcaagagcacgaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 25426760 - 25426880
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||     
T  25426760 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 25426859  T
Q  209 agttggagcacaaatttagca 229  Q
    ||   |||||| |||||||||    
T  25426860 agcaagagcacgaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 18778112 - 18778014
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||    
T  18778112 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatca 18778014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 12506 - 12626
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||| ||| || | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||     
T  12506 gcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 12605  T
Q  209 agttggagcacaaatttagca 229  Q
    ||   |||||| |||||||||    
T  12606 agcaagagcacgaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 21073715 - 21073595
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||| ||||||||||||||||||| |||||     
T  21073715 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatccattcatgcatacaaacataacatcac 21073616  T
Q  209 agttggagcacaaatttagca 229  Q
    ||   |||||| |||||||||    
T  21073615 agcaagagcacgaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 356
Target Start/End: Complemental strand, 5450768 - 5450695
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||| ||  ||||||||||||||||||||||   ||| | ||||| | |||||||||||||||||||    
T  5450768 atgattatgatgaattctaacccccttaccttaattattatcaattcctagcccaagcttcactttagctccta 5450695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 21222519 - 21222462
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||| ||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  21222519 ctaacccccataccttaattatcaccaattcctagcccaagcttcactttagctccta 21222462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 16105967 - 16105999
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  16105967 atgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 23493942 - 23494029
Alignment:
Q  4 acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 91  Q
    |||||| | |||| |||||| | ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  23493942 acccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 23494029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 108760 - 108728
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  108760 atgattatgatgaagactaacccccttacctta 108728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 7728466 - 7728530
Alignment:
Q  27 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 91  Q
    ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  7728466 acaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 7728530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 9730310 - 9730278
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  9730310 atgattatgatgaagactaacccccttacctta 9730278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 16536514 - 16536546
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||| ||||    
T  16536514 atgattatgataaagactaacccccttatctta 16536546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 136; Significance: 7e-71; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 13 - 315
Target Start/End: Original strand, 23153480 - 23153786
Alignment:
Q  13 atgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gc 110  Q
    ||||||||||||| |||||||| |||| || | | || |||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  ||    
T  23153480 atgattcatcaaccacaacatcaattaacagccataatatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagc 23153579  T
Q  111 acaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaag 210  Q
    |||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||    
T  23153580 acaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacag 23153679  T
Q  211 ttggagcacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 308  Q
    ||||||||| ||||||| |||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23153680 ttggagcacgaatttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaaccccct 23153779  T
Q  309 tacctta 315  Q
    |||||||    
T  23153780 tacctta 23153786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 2 - 314
Target Start/End: Complemental strand, 14626359 - 14626045
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtca-aattc 100  Q
    |||||||| | |||||||||||||||||||||| |||| || | | |||||||||||  ||||||||| | ||||| | ||| ||||| |  || |||||    
T  14626359 atacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatctcaagttaacaacaacttagcataattc 14626260  T
Q  101 atccatttgcaca--attttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaac 198  Q
    | ||| |||||||  ||||||||||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||    
T  14626259 a-ccaattgcacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaac 14626161  T
Q  199 atatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaaga 298  Q
    ||| ||||| ||   |||||| |||||||||| ||| ||||||||||| |||||| ||||||||||| |||||  ||| ||| ||||||| ||||||  |    
T  14626160 ataacatcacagcaagagcacgaatttagcaataattatccataatcacaattcaaacaacatttgagaatttgtaaagtgaagatgattgtgataataa 14626061  T
Q  299 ctaacccccttacctt 314  Q
    ||||||||||||||||    
T  14626060 ctaacccccttacctt 14626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 14 - 241
Target Start/End: Complemental strand, 1657976 - 1657748
Alignment:
Q  14 tgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattc-atccattt-gca 111  Q
    |||||||||||| |||||||| |||| || ||| |||||||| || |||||||||||| ||||||||| | | ||| |  |||| || ||| |||  |||    
T  1657976 tgattcatcaacaacaacatcaattaacaacaataacatcaactgaacaagaatcataactcaattca-caataacttagcaaaatccatcaattgagca 1657878  T
Q  112 caattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 211  Q
    |||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| |||||||||||||| |||||||| ||||| |||    
T  1657877 caattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatccaaacataacatcacagt 1657778  T
Q  212 tggagcacaaatttagcaacaatcatccat 241  Q
    | |||||| |||||||||||||| ||||||    
T  1657777 tagagcacgaatttagcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 35009680 - 35009439
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| |||||||| |||| || ||||||||||||||| ||| |  ||  | |  |||||||| |||||||  |||| |||    
T  35009680 atacccaagcaatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaacatagcaaaattc 35009581  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||     
T  35009580 accaattgagcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaact 35009481  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    || ||||| |||| |||||| |||||||||||||| ||||||    
T  35009480 taacatcacagttagagcacgaatttagcaacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 241
Target Start/End: Original strand, 15862507 - 15862734
Alignment:
Q  14 tgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattc-atccattt-gca 111  Q
    |||||||||||| |||||||| |||| || ||| ||||| ||| | |||||||||||| ||||||||| | | ||| |  |||| || ||| |||  |||    
T  15862507 tgattcatcaacaacaacatcaattatcagcaataacataaat-gaacaagaatcataactcaattca-caataacttagcaaaatccatcaattgagca 15862604  T
Q  112 caattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 211  Q
    |||||||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||    
T  15862605 caattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagt 15862704  T
Q  212 tggagcacaaatttagcaacaatcatccat 241  Q
    | |||||| ||||||| |||||| ||||||    
T  15862705 tagagcacgaatttagtaacaattatccat 15862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 246 - 315
Target Start/End: Original strand, 23148266 - 23148335
Alignment:
Q  246 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23148266 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 19983224 - 19983149
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  19983224 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 19983149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 35015089 - 35015014
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  35015089 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 35015014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 14 - 316
Target Start/End: Complemental strand, 1650322 - 1650020
Alignment:
Q  14 tgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gca 111  Q
    |||||||||||| |||||||| | || || ||| |||||||||||  ||||||||| | ||||| | ||| | ||| |  |||| |||| | |||  |||    
T  1650322 tgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaattaaccataacttagcaaaattcaccaattgagca 1650223  T
Q  112 caattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 211  Q
    ||||||||| ||||| |||||  ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||| || ||||| |||    
T  1650222 caattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcacagt 1650123  T
Q  212 tggagcacaaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctta 310  Q
      |||||| ||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  ||||||||||||||||||||||||||||    
T  1650122 aagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatta-catgattatgataaagactaaccccctta 1650026  T
Q  311 ccttaa 316  Q
    ||||||    
T  1650025 ccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 18583640 - 18583715
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||||||    
T  18583640 atgattatgatgaaaactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 18583715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 27751605 - 27751688
Alignment:
Q  158 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||| || | ||||||||||||||||||||||| ||||| | || |||||| |||||||| ||| | ||||||    
T  27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccat 27751688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 21623506 - 21623563
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 21623563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 201
Target Start/End: Original strand, 25175695 - 25175787
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 201  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  |||||||||||||||||||||||    
T  25175695 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacata 25175787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 27654103 - 27653983
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  |||||||||||||||||| |||| |||||     
T  27654103 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaagcataacatcac 27654004  T
Q  209 agttggagcacaaatttagca 229  Q
    ||   |||||| |||||||||    
T  27654003 agcaagagcacgaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 22361676 - 22361619
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||||||||||||||| |||| | ||||  | |||||||||||||||||||    
T  22361676 ctaacccccttaccttaattatcaccaattcctaggccaagcttcactttagctccta 22361619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 14152632 - 14152704
Alignment:
Q  284 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    |||||||||| |||| |||||||||| ||||||||| | | || | ||||| | |||||||||||||||||||    
T  14152632 tgattatgatgaagaataacccccttgccttaattagcacaaattcctagcccaagcttcactttagctccta 14152704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 18002427 - 18002395
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  18002427 atgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 18381909 - 18381821
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 90  Q
    |||||||| | |||| |||||||| ||||||||  |||||| ||||||||||||||| ||| || || || | ||||||||| ||||||    
T  18381909 atacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttatcacaattcaacaacaaca 18381821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 23995247 - 23995279
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  23995247 atgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 26090059 - 26090091
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  26090059 atgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 314
Target Start/End: Original strand, 4991396 - 4991427
Alignment:
Q  283 atgattatgataaagactaacccccttacctt 314  Q
    ||||||||||||||||||||||||||||||||    
T  4991396 atgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 315
Target Start/End: Complemental strand, 15742150 - 15742120
Alignment:
Q  285 gattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||    
T  15742150 gattatgataaagactaacccccttacctta 15742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 241
Target Start/End: Original strand, 29665937 - 29666137
Alignment:
Q  44 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatat 141  Q
    ||||||||||||||| ||| |||||||| |||| |||||| ||||| |  |||| |||| | |||  | ||||||| ||||||||  ||||| | ||||     
T  29665937 caacaacatcaattgaacatgaatcatatctcatttcaacaacaacttagcaaaattcaccaattgagtacaattt-cataacttgacatttatgcatac 29666035  T
Q  142 tt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatcc 239  Q
    ||  ||||||| ||| | ||| ||||||||||| |||| |||||||||| ||||  || ||| ||||| || | |||||| |||||| ||||||| ||||    
T  29666036 tttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatcc 29666135  T
Q  240 at 241  Q
    ||    
T  29666136 at 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 27740860 - 27740941
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 83  Q
    |||||||||| |||||||||| || ||||||||   ||  | |||| |||||||||| ||| |||||||| |||||||||||    
T  27740860 atacccaaaccatgattcatccacaacaacatcagataatagcaaccacatcaattgaacatgaatcatatctcaattcaac 27740941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 1657693 - 1657661
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  1657693 atgattatgatgaagactaacccccttacctta 1657661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 15862789 - 15862821
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  15862789 atgattatgatgaagactaacccccttacctta 15862821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 18823315 - 18823283
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  18823315 atgattatgatgaagactaacccccttacctta 18823283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 18839170 - 18839138
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  18839170 atgattatgatgaagactaacccccttacctta 18839138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 25367438 - 25367374
Alignment:
Q  27 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 91  Q
    ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  25367438 acaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 25367374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 27751742 - 27751774
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  27751742 atgattatgatgaagactaacccccttacctta 27751774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 32276691 - 32276659
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  32276691 atgattatgatgaagactaacccccttacctta 32276659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 109 - 313
Target Start/End: Complemental strand, 51314 - 51110
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    |||||||||||| ||||| |||||| ||| ||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||| |||||||||     
T  51314 gcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcac 51215  T
Q  209 agttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 308  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  51214 agttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatctcct 51115  T
Q  309 tacct 313  Q
    |||||    
T  51114 tacct 51110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 132; Significance: 2e-68; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 315
Target Start/End: Complemental strand, 247683 - 247366
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattca 101  Q
    |||||||| | ||||||||||||| |||||||| |||| ||   | ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |      
T  247683 atacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattt 247584  T
Q  102 tccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
     ||| |||  ||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||  |||||||||| |||| |||||||||||||||||||||    
T  247583 accaattgagcacaattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattcatgcatacaaaca 247484  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaag 297  Q
    |||||| | ||||||||||| |||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  247483 tatcattacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaag 247384  T
Q  298 actaacccccttacctta 315  Q
    ||||||||||||||||||    
T  247383 actaacccccttacctta 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 34107 - 34075
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  34107 atgattatgatgaagactaacccccttacctta 34075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 315
Target Start/End: Original strand, 272047 - 272362
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| |||||||| |||| || | | |||| |||||| |||||||||||| |||||| |||| ||||| |  |||| |||    
T  272047 atacccaagcaatgattcatcaaccacaacatcaattaacagctataacaccaattgaacaagaatcataactcaatccaaccacaacttagcaaaattc 272146  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| |  ||| |||||||||| |||| |||||||||| ||||||||||    
T  272147 accaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaattcattcatacaaaca 272246  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagac 299  Q
    |||||| | |||||||| ||  ||||||||| | | |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  272247 tatcattacagttggagtacgtatttagcaatatttatccataatcaaaatttatacaatatttgaaaatttacaaaatgatgatgattatgataaagac 272346  T
Q  300 taacccccttacctta 315  Q
    ||||||||||||||||    
T  272347 taacccccttacctta 272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 131; Significance: 7e-68; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 109 - 315
Target Start/End: Complemental strand, 1088 - 882
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    |||||||||||| ||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  1088 gcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 989  T
Q  209 agttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 308  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||| |||||  ||| ||| |||||||||||||||||||||||||||    
T  988 agttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgtaaagtgaagatgattatgataaagactaaccccct 889  T
Q  309 tacctta 315  Q
    |||||||    
T  888 tacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 129; Significance: 1e-66; HSPs: 4)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 2 - 315
Target Start/End: Complemental strand, 26656 - 26340
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||  |||||||| |||| || | | ||||||||||| |||||||||||| |||| |  ||| ||||| |  |||| |||    
T  26656 atacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataactcattctaacaacaacttagcaaaattc 26557  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  | |||||||||| ||||| |||||| ||||||||| |||||| | | | ||||| |||| |||| |||| ||||||||| |||||||||||    
T  26556 accaattgagaacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattatcatcaattcacgcatacaaaca 26457  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaaga 298  Q
    |||||||||||||||||||| |||||||||||||| || ||| ||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26456 tatcatcaaagttggagcacgaatttagcaacaattatacattatgaaaaattcatacaacatttgaaaatttacaaaatgatcatgattatgataaaga 26357  T
Q  299 ctaacccccttacctta 315  Q
    |||||||||||||||||    
T  26356 ctaacccccttacctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 109 - 241
Target Start/End: Complemental strand, 8312 - 8180
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    |||||||||||| |||||| ||||| |||||| || ||| || ||| | ||||||||||||||| |||| | ||||||||||||||||||||| |||||     
T  8312 gcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattatcaccaattcatgcatacaaacataacatcac 8213  T
Q  209 agttggagcacaaatttagcaacaatcatccat 241  Q
    |||| |||||| |||||||||||||| ||||||    
T  8212 agttagagcacgaatttagcaacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 6934 - 6877
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||| ||||||    
T  6934 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttaactccta 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 8418 - 8358
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcaca 62  Q
    |||||||| | ||||||||| ||| |||||||| |||| || ||||||||||||||| |||    
T  8418 atacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaaca 8358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 109 - 315
Target Start/End: Complemental strand, 6196 - 5990
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    |||||||||| | ||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  6196 gcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 6097  T
Q  209 agttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccct 308  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||| |||  ||||||||||||||||||||||||||    
T  6096 agttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaagtgaaaatgattatgataaagactaaccccct 5997  T
Q  309 tacctta 315  Q
    |||||||    
T  5996 tacctta 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 125; Significance: 3e-64; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 2 - 315
Target Start/End: Complemental strand, 128409 - 128095
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattca 101  Q
    |||||||| | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||||| ||| ||||| |  |||| |      
T  128409 atacccaatcaattattcatcaatcacaacatccattaacatccataacatcaattgaacaagaatcaaatctcaatt-aacaacaacctaacaaaattc 128311  T
Q  102 tccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
     ||| |||  ||||||||||| |||||  ||  | |||| |||| |||||| ||| | |||||||||| |||| |||| |||||||||||||||||||||    
T  128310 gccaattgagcacaattttcacaacttaacacctttacacatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaaca 128211  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagac 299  Q
    |||||||| ||||| ||||| |||||||||||||| |||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||    
T  128210 tatcatcacagttgaagcacgaatttagcaacaattatccataagcaaaattcatacaacttttgaaaatttgcaaaatgaagatgattatgataaagac 128111  T
Q  300 taacccccttacctta 315  Q
    ||||||||||||||||    
T  128110 taacccccttacctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 31787 - 31697
Alignment:
Q  117 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    |||||||||| |||||| | ||||| | || ||| ||| | |||||||||||||||  ||  |||||||||||||| |||||||| |||||    
T  31787 ttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcattcaaacataacatca 31697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 109 - 315
Target Start/End: Original strand, 12244 - 12450
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    |||||||||||| ||||| |||||| |||| ||||||||||| | | | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  12244 gcacaattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 12343  T
Q  209 agttggagcacaaatttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccc 307  Q
    |||| |||||| |||||||||||||| |||||||||||||| |||||||| |||||| ||| ||||||||| | ||||||||||||||||||||||||||    
T  12344 agttagagcacgaatttagcaacaattatccataatcaaaatttcatacagcatttg-aaagttacaaaattaagatgattatgataaagactaaccccc 12442  T
Q  308 ttacctta 315  Q
    ||||||||    
T  12443 ttacctta 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 305
Target Start/End: Complemental strand, 5302 - 4996
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||  |||||||| |||| || | | ||||||||||| |||||||||||| |||| |  ||| ||||| |  |||| |||    
T  5302 atacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataactcattctaacaacaactttgcaaaattc 5203  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| ||||||||| |||||| | | | |||||||||| |||| |||| ||||||||| |||||||||||    
T  5202 accaattgagcacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattatcatcaattcacgcatacaaaca 5103  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaaga 298  Q
    |||| ||| |||||||| || |||||||||||||| |||||| ||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5102 tatcgtcacagttggagtacgaatttagcaacaattatccattatgaaaaattcatacaacatttgaaaatttacaaaatgataatgattatgataaaga 5003  T
Q  299 ctaaccc 305  Q
    |||||||    
T  5002 ctaaccc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 119; Significance: 1e-60; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 76 - 241
Target Start/End: Original strand, 26892 - 27058
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  26892 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 26991  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  26992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 76 - 234
Target Start/End: Original strand, 22637 - 22796
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  22637 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 22736  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaat 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22737 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 22857 - 22889
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttacctta 22889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 27112 - 27144
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttacctta 27144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 119; Significance: 1e-60; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 76 - 241
Target Start/End: Complemental strand, 1748 - 1582
Alignment:
Q  76 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 174  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
T  1748 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 1649  T
Q  175 tattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  1648 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttacctta 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 2 - 315
Target Start/End: Original strand, 8900 - 9215
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | || |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||    
T  8900 atacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttaacaaaattc 8999  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| |||||  ||||| |||||| || |||||| ||| | |||||||||| |||| |||| ||| |||||||||||||||||    
T  9000 accaattgagcacaattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatcttacaattatcatcgattcatgcatacaaaca 9099  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagac 299  Q
    || ||||| |  |||||||| ||||||||||||||  ||||||| |||||||| |||||| ||||||||||| |||||||| ||||||||||||||||||    
T  9100 taacatcacaaatggagcacgaatttagcaacaattttccataagcaaaattcgtacaacttttgaaaatttgcaaaatgaagatgattatgataaagac 9199  T
Q  300 taacccccttacctta 315  Q
    ||||||||||||||||    
T  9200 taacccccttacctta 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 2 - 315
Target Start/End: Complemental strand, 123405 - 123087
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | || |||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| || |||  ||| ||||| |  |||| |||    
T  123405 atacccaagccattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataacttaatctaacaacaacttagcaaaattc 123306  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||    
T  123305 accaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaaca 123206  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaa 296  Q
    |||||||| | ||||||||| |||||||||||||| |||||| ||   ||||||||||||||||||| |||||||| ||||| |||||||||||| | ||    
T  123205 tatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgcaaatttacaaaaattatgatgattatggtgaa 123106  T
Q  297 gactaacccccttacctta 315  Q
    |||||||||||||||||||    
T  123105 gactaacccccttacctta 123087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 114; Significance: 1e-57; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 109 - 315
Target Start/End: Complemental strand, 89586 - 89378
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    |||||||||||| ||||| | |||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||| |||||||||     
T  89586 gcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcac 89487  T
Q  209 agttggagcacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccc 306  Q
    ||||||||||| |||||||||||||| |||||| ||   |||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  89486 agttggagcacgaatttagcaacaattatccattatgcaaaaattcatagaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccc 89387  T
Q  307 cttacctta 315  Q
    |||||||||    
T  89386 cttacctta 89378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 190 - 315
Target Start/End: Complemental strand, 107835 - 107708
Alignment:
Q  190 catacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgat 287  Q
    |||||||| ||||||||| ||||||||||| |||||||||| ||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 107736  T
Q  288 tatgataaagactaacccccttacctta 315  Q
     ||||| |||||||||||||||||||||    
T  107735 catgatgaagactaacccccttacctta 107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 314
Target Start/End: Original strand, 130880 - 130911
Alignment:
Q  283 atgattatgataaagactaacccccttacctt 314  Q
    ||||||||||||||||||||||||||||||||    
T  130880 atgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 107; Significance: 1e-53; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 8870 - 9192
Alignment:
Q  1 tatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-tt 99  Q
    ||||||||| | ||||||||||||| |||||||| ||||  | ||| ||||||||||| |||  ||||||| ||||||||||| ||||| |  |||| ||    
T  8870 tatacccaagcaatgattcatcaacaacaacatcaattaatagcaataacatcaattgaacattaatcatatctcaattcaacaacaacttagcaaaatt 8969  T
Q  100 catccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaac 198  Q
    || | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||    
T  8970 caccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaac 9069  T
Q  199 atatcatcaaagttggagcacaaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatga 292  Q
    ||||||||| || |||||||| |||||||||||||| |||||  ||   ||||| ||||| ||||||||||| || ||||    ||||||||||||||||    
T  9070 atatcatcacagatggagcacgaatttagcaacaattatccaattatgaaaaatacataccacatttgaaaaattgcaaaaatgatgatgatgattatga 9169  T
Q  293 taaagactaacccccttacctta 315  Q
    | ||||||||| | |||||||||    
T  9170 tgaagactaacacacttacctta 9192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 267
Target Start/End: Original strand, 148743 - 149012
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| ||||| || |||| || | | ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||    
T  148743 atacccaagcaatgattcatcaaccacaacttcaattaacaaccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattc 148842  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||||||||||||||||||||    
T  148843 accaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaaca 148942  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa 267  Q
    |||||||| |||||||||||||||||| ||||||| ||| || ||   ||||||||||||||||||||||    
T  148943 tatcatcacagttggagcacaaatttaacaacaattatcaattatgcaaaaattcatacaacatttgaaa 149012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 221 - 315
Target Start/End: Original strand, 146844 - 146938
Alignment:
Q  221 aatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 315  Q
    ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146844 aatttaggaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 87; Significance: 1e-41; HSPs: 3)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 241
Target Start/End: Original strand, 13539 - 13769
Alignment:
Q  13 atgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gc 110  Q
    ||||||||||||| |||||||| |||| || ||||||||||||||| ||| |  ||  | |  |||||||| |||||||  |||| |||||| |||  ||    
T  13539 atgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaacatagcaaaattcatcaattgagc 13638  T
Q  111 acaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaag 210  Q
    |||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||||||    
T  13639 acaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaaag 13738  T
Q  211 ttggagcacaaatttagcaacaatcatccat 241  Q
    || |||||| |||||||||||||| ||||||    
T  13739 ttagagcacgaatttagcaacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 42677 - 42749
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||||| |||||||||||||||||   |||||||||||| |||||||||||||||||| |||||||||    
T  42677 atgattatgataaaaactaacccccttacctt---tatctccaactattagctctagcttcacttttgctcctatg 42749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 13824 - 13856
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  13824 atgattatgatgaagactaacccccttacctta 13856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 48223 - 48443
Alignment:
Q  16 attcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcaca 113  Q
    |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||    
T  48223 attcatcaatcacaacatcaattaacatctataacatcaattgaacaagaatcaaatctcaaattaacaacaacttaacaaaattcaccaattgagcaca 48322  T
Q  114 attttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 213  Q
    ||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| | |||||    
T  48323 attttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttg 48422  T
Q  214 gagcacaaatttagcaacaat 234  Q
    |||||| ||||||||||||||    
T  48423 gagcacgaatttagcaacaat 48443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 358
Target Start/End: Original strand, 20493 - 20567
Alignment:
Q  284 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| |||||||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatg 20567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 5660 - 5785
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| ||||| |||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| ||||||    
T  5660 gcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaa 5759  T
Q  209 agttggagcacaaatttagcaacaat 234  Q
    ||||||||||| ||||||||||||||    
T  5760 agttggagcacgaatttagcaacaat 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 5846 - 5878
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||| |||||||||||||||||||||||    
T  5846 atgattatggtaaagactaacccccttacctta 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 775 - 534
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| |||||||| ||||||| | | ||||||||||  |||||||||||| || |||  |||   ||| |  |||| |||    
T  775 atacccaagcaatgattcatcaaccacaacatcaattagcagccataacatcaattaaacaagaatcataacttaatctaacagtaacttagcaaaattc 676  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  | |||||||||| ||||  |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||    
T  675 accaattgagtacaattttcacaactcatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaaca 576  T
Q  200 tatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    |||||||| ||||||||||| |||||||||||||| ||||||    
T  575 tatcatcacagttggagcacgaatttagcaacaattatccat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 73; Significance: 3e-33; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 107783 - 108003
Alignment:
Q  16 attcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcaca 113  Q
    |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||| ||||| | ||||| |||| | |||  |||||    
T  107783 attcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcaca 107882  T
Q  114 attttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 213  Q
    ||||| | ||||| |||||| | || |||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| | |||||    
T  107883 atttttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttg 107982  T
Q  214 gagcacaaatttagcaacaat 234  Q
    |||||| ||||||| ||||||    
T  107983 gagcacgaatttagtaacaat 108003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 172
Target Start/End: Complemental strand, 64648 - 64585
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 172  Q
    ||||||| |||||||||| |||||| |||||||||||||||| ||| | |||||||||||||||    
T  64648 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcataca 64585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
Q  184 ttcatgcatacaaacatatcatcaaagttggagcacaaattta 226  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 241
Target Start/End: Original strand, 41670 - 41911
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | ||||||||||||| ||||||||  ||| || ||||||||||||||| ||| |  ||  | |  |||||||| |||||||  |||| |||    
T  41670 atacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaacatagcaaaattc 41769  T
Q  101 atccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaac 198  Q
    | ||| |||  ||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||    
T  41770 a-ccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaac 41868  T
Q  199 atatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    ||| ||||| |||| |||||| |||||| ||||||| ||||||    
T  41869 ataacatcacagttagagcacgaatttaacaacaattatccat 41911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 41957 - 41997
Alignment:
Q  275 aaatgatgatgattatgataaagactaacccccttacctta 315  Q
    ||||||  ||||||||||| |||||||||||||||||||||    
T  41957 aaatgaacatgattatgatgaagactaacccccttacctta 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 80187 - 80262
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||    
T  80187 atgattatgataaagactaacccccttaccttaattatctccaactattagctcaagcttcacttttgctcctatg 80262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 241
Target Start/End: Complemental strand, 34690 - 34460
Alignment:
Q  14 tgattcatcaactacaacatctattagcatcaacaacatcaattgca-caagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gc 110  Q
    |||||||||||| |||||||| | || || ||| ||||||||||  | || |||||||| ||||||||||| ||||| |  |||| |||| | |||  |     
T  34690 tgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaattcaacaacaacttagcaaaattcacctattgaga 34591  T
Q  111 acaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaag 210  Q
    |||||||||| ||||||  |||| |||| | || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| ||    
T  34590 acaattttcacaacttcatatttttacacaattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacag 34491  T
Q  211 ttggagcacaaatttagcaacaatcatccat 241  Q
    || |||||| |||||||||| ||| ||||||    
T  34490 ttagagcacgaatttagcaataattatccat 34460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 61; Significance: 4e-26; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 282 - 358
Target Start/End: Complemental strand, 166197 - 166121
Alignment:
Q  282 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  166197 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 166121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 162111 - 162036
Alignment:
Q  282 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 357  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  162111 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 356
Target Start/End: Complemental strand, 116483 - 116410
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  116483 atgattatgatgaaatctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 116410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 230
Target Start/End: Original strand, 2996 - 3215
Alignment:
Q  14 tgattcatcaactacaacatctattagcatcaacaacatcaattgca-caagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gc 110  Q
    |||||||||||| |||||||| | || || ||| ||||||||||  | || |||||||| ||||||||||| ||||| |  |||| |||| | |||  ||    
T  2996 tgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagc 3095  T
Q  111 acaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaag 210  Q
    |||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||| ||||||||||| ||||| ||    
T  3096 acaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatggatacaaacataacatcacag 3195  T
Q  211 ttggagcacaaatttagcaa 230  Q
       |||||| ||||||||||    
T  3196 caagagcacgaatttagcaa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 9578 - 9371
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | |||||||||||||||||||||| |||| || | | ||||||| |||  ||||||||| | ||||| | ||| | ||| |  |||| |||    
T  9578 atacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaattaacaataacttagcaaaattc 9479  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||    
T  9478 accaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaaca 9379  T
Q  200 tatcatca 207  Q
    || |||||    
T  9378 taacatca 9371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 16476 - 16269
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttc 100  Q
    |||||||| | |||||||||||||||||||||| |||| || | | ||||||| |||  ||||||||| | ||||| | ||| | ||| |  |||| |||    
T  16476 atacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaattaacaataacttagcaaaattc 16377  T
Q  101 atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaaca 199  Q
    | | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||    
T  16376 accaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaaca 16277  T
Q  200 tatcatca 207  Q
    || |||||    
T  16276 taacatca 16269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 31212 - 31137
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  31212 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 31137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 357
Target Start/End: Complemental strand, 5809 - 5735
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 357  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  5809 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 357
Target Start/End: Complemental strand, 6015 - 5941
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 357  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  6015 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 13445 - 13347
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  13445 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 13347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 207
Target Start/End: Original strand, 167 - 265
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    ||||||| | |||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||    
T  167 gcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 30417 - 30492
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    ||||||||||| || | |||||||||||||||||||||| |||| || || ||| ||||||||||| ||| |||||    
T  30417 atgattatgatgaaaaataacccccttaccttaattatcaccaattattaactcaagcttcacttttgcttctatg 30492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 282 - 358
Target Start/End: Complemental strand, 385 - 309
Alignment:
Q  282 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||| |||||| ||||||||||| |||||||||    
T  385 gatgattatgataaagaataaccccgttaccttaattatcaccaactattagctcaagcttcacttttgctcctatg 309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 206
Target Start/End: Original strand, 43129 - 43226
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatc 206  Q
    ||||||| ||||||||||  ||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||| ||||||| ||||    
T  43129 gcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatagaaacataacatc 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 191
Target Start/End: Complemental strand, 5335 - 5254
Alignment:
Q  110 cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 191  Q
    ||||||||||||||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
T  5335 cacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 284 - 358
Target Start/End: Original strand, 1701 - 1775
Alignment:
Q  284 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 1775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 14181 - 14083
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    ||||||| |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| ||||||||||||||||| ||||| |||||    
T  14181 gcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatca 14083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 207
Target Start/End: Complemental strand, 21233 - 21138
Alignment:
Q  112 caattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 207  Q
    |||| |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| ||||||| ||| ||||||||||| |||||    
T  21233 caatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatca 21138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 284 - 358
Target Start/End: Complemental strand, 19881 - 19807
Alignment:
Q  284 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 19807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 358
Target Start/End: Complemental strand, 24185 - 24111
Alignment:
Q  284 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| |||||||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatg 24111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 1424 - 1304
Alignment:
Q  109 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 208  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  1424 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 1325  T
Q  209 agttggagcacaaatttagca 229  Q
    ||   |||||| |||||||||    
T  1324 agcaagagcacgaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 354
Target Start/End: Original strand, 94 - 164
Alignment:
Q  284 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcc 354  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||    
T  94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcc 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 358
Target Start/End: Complemental strand, 6335 - 6261
Alignment:
Q  284 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 358  Q
    |||||||||| || |||||||||||||||||||||||| || |||| || ||| ||||||||||| |||||||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcctatg 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 41 - 4
Alignment:
Q  284 tgattatgataaagactaacccccttaccttaattatc 321  Q
    |||||||||| || ||||||||||||||||||||||||    
T  41 tgattatgatgaacactaacccccttaccttaattatc 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 110 - 191
Target Start/End: Original strand, 3854 - 3936
Alignment:
Q  110 cacaattttcataacttctcatttct-acatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 191  Q
    |||||||| |||||||| |||||| | |||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
T  3854 cacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 356
Target Start/End: Complemental strand, 1436 - 1363
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||| ||  ||||||||||||||| ||||||| |||| | ||||||| ||||||||||||| |||||    
T  1436 atgattatgatgaattctaacccccttacctcaattatcaccaattcctagctcaagcttcactttagttccta 1363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 35816 - 35873
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 35873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 9404 - 9480
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 78  Q
    |||||||| | ||||||||||||| |||||||| |||| || | | ||||||||||| |||||||||||| ||||||    
T  9404 atacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaat 9480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 3370 - 3453
Alignment:
Q  158 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 241  Q
    |||||||||||||||  ||| || ||||||||||||||||| || ||||| || | |||||| ||||||||| |||| ||||||    
T  3370 accaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccat 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 442 - 499
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||||||| | ||||| |||| | ||||||| |||||||||||||||||||    
T  442 ctaacccccttacctcagttatcaccaattcctagctcaagcttcactttagctccta 499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 76756 - 76699
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    |||||||||||||||||||||||  ||| | ||||| | |||||||||||||||||||    
T  76756 ctaacccccttaccttaattatcagcaattcctagcccaagcttcactttagctccta 76699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 316
Target Start/End: Complemental strand, 193429 - 193396
Alignment:
Q  283 atgattatgataaagactaacccccttaccttaa 316  Q
    ||||||||||||||||||||||||||||||||||    
T  193429 atgattatgataaagactaacccccttaccttaa 193396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 6475 - 6443
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  6475 atgattatgataaagactaacccccttacctta 6443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 910 - 878
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  910 atgattatgataaagactaacccccttacctta 878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 9914 - 9882
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  9914 atgattatgataaagactaacccccttacctta 9882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 13317 - 13285
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  13317 atgattatgataaagactaacccccttacctta 13285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 57424 - 57392
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  57424 atgattatgataaagactaacccccttacctta 57392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 70348 - 70307
Alignment:
Q  184 ttcatgcatacaaacatatcatcaaagttggagcacaaattt 225  Q
    |||||||||||||||||||||||| |||||||| || |||||    
T  70348 ttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 55904 - 55936
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  55904 atgattatgataaagactaacccccttacctta 55936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 108107 - 108075
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||||||||||||||||||||||    
T  108107 atgattatgataaagactaacccccttacctta 108075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 315
Target Start/End: Original strand, 18015 - 18058
Alignment:
Q  272 acaaaatgatgatgattatgataaagactaacccccttacctta 315  Q
    ||||||| || ||||||||||| |||||||||||||||||||||    
T  18015 acaaaataattatgattatgatgaagactaacccccttacctta 18058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 197477 - 197390
Alignment:
Q  4 acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 91  Q
    |||||||| |||| |||||||| |||| |||  |||||| ||||||||||||||| ||| |||||  | | ||||||||| |||||||    
T  197477 acccaaaccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacat 197390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 632 - 689
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    |||||||||||||| |||||||| | || | ||||| | |||||||||||||||||||    
T  632 ctaacccccttaccataattatcactaattcctagcccaagcttcactttagctccta 689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 6999 - 7056
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    |||||||||||||| |||||||| |||| | ||||| | | |||||||||||||||||    
T  6999 ctaacccccttaccataattatcaccaattcctagcccaaccttcactttagctccta 7056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
Q  184 ttcatgcatacaaacatatcatcaaagttggagcacaaattt 225  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
Q  184 ttcatgcatacaaacatatcatcaaagttggagcacaaattt 225  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 8216 - 8257
Alignment:
Q  184 ttcatgcatacaaacatatcatcaaagttggagcacaaattt 225  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  8216 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 56226 - 56106
Alignment:
Q  116 tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 213  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||| | | | ||||||||||| |||| ||||| ||||||| || || ||| ||||| ||||     
T  56226 tttcataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagtta 56127  T
Q  214 gagcacaaatttagcaacaat 234  Q
    |||||| |||||| |||||||    
T  56126 gagcacgaatttaacaacaat 56106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 43708 - 43651
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  43708 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 43651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 31357 - 31414
Alignment:
Q  299 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 356  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  31357 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 31414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 2476 - 2532
Alignment:
Q  2 atacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 58  Q
    |||||||| | |||| |||||||| ||||||||  |||||| |||||||||||||||    
T  2476 atacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattg 2532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 2548 - 2612
Alignment:
Q  4 acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatc 68  Q
    |||||||| |||| |||||||| |||| |||  |||||| ||||||||||||||| ||| |||||    
T  2548 acccaaaccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatc 2612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 17241 - 17209
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  17241 atgattatgatgaagactaacccccttacctta 17209  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 5508 - 5476
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  5508 atgattatgatgaagactaacccccttacctta 5476  T

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Target: scaffold0303 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 4378 - 4346
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||||||| |||||||||||||||||    
T  4378 atgattatgataaagtctaacccccttacctta 4346  T

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Target: scaffold0234 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 17336 - 17304
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||||||||||||||| |||||||||    
T  17336 atgattatgataaagactaacccgcttacctta 17304  T

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Target: scaffold0173 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 5549 - 5581
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  5549 atgattatgatgaagactaacccccttacctta 5581  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 34340 - 34308
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  34340 atgattatgatgaagactaacccccttacctta 34308  T

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Target: scaffold0066 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 45338 - 45370
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    ||||||||||| |||||||||||||||||||||    
T  45338 atgattatgatgaagactaacccccttacctta 45370  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 12450 - 12418
Alignment:
Q  283 atgattatgataaagactaacccccttacctta 315  Q
    |||||||||||||| ||||||||||||||||||    
T  12450 atgattatgataaaaactaacccccttacctta 12418  T

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