View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19726_high_30 (Length: 378)
Name: NF19726_high_30
Description: NF19726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19726_high_30 |
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Alignment Details
Target: chr7 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 8 - 360
Target Start/End: Original strand, 10710052 - 10710404
Alignment:
| Q |
8 |
ccaagaatattccaataaatagtcaacacaagaagttaacaatgagaaagagtgaattgtatattggtctaattggtattgcaattggaattttctttgc |
107 |
Q |
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| T |
10710052 |
ccaacaatattccaataaatagtcaacacaagaagtcaacaatgagaaagagtgaattgtatattggtctaattggtattgcaattggaattttctttgc |
10710151 |
T |
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| Q |
108 |
tttattagtagctttttgctttatctggttgaaacagaggaaggtggaagaaaatgcatgcaaagaaagagatatggagttacaatatctaaatcaaagt |
207 |
Q |
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| T |
10710152 |
tttattagtatctttttgctttatctggtttaaacagaggaaggtggaagaaaatgcatgcaaagaaagagatatggagttacaatatctaaatcaaagt |
10710251 |
T |
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| Q |
208 |
gtgagagcaacaagtgataagaaagtttcatttgaagggtcacaagacacacttgatagtaaaatcattgacgcgacgccgcgtaagatgttattggaga |
307 |
Q |
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| T |
10710252 |
gtgagaacaactagtgataagaaagtttcatttgaagggtcacaagacacacttgatagtaaaatcattgacgcgacgccacgtaagatgttattggaga |
10710351 |
T |
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| Q |
308 |
catacacaattgatgatttgagaaaagcaacagaggatttcagttcaaattgt |
360 |
Q |
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| T |
10710352 |
catacacaattgatgatttgagaaaagcaacagaggatttcagttcaaattgt |
10710404 |
T |
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