View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19726_high_38 (Length: 299)
Name: NF19726_high_38
Description: NF19726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19726_high_38 |
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Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 18 - 284
Target Start/End: Original strand, 28590895 - 28591161
Alignment:
| Q |
18 |
acgatggccagcgctatgaacaataannnnnnnggaagcatcagaatccatcgcaacaatggatttctgattagcatctttagaagattcacctaacttg |
117 |
Q |
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| T |
28590895 |
acgatggccagcgctatgaacagtaatttttttggaagcatcagaatccatcgcaacaatggatttctgattagcaactttagaagattcacctaacttg |
28590994 |
T |
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| Q |
118 |
gttacagtagcagaaccagaaacaccttgaaattcaacaactgatttattaagatcatgttcatcaccgaaaaacaccgaagtagagttaagatcatata |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
28590995 |
gttacagtagcagaaccagaaacaccttgaaattcaacaactgatttattaagatcatgtttatcaccgaaaaacaccgaagtagagttaagatcatata |
28591094 |
T |
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| Q |
218 |
gtaaaccagaattccgattcttctcaacagaatctcccatcttcgccgaatccatgaaactcatcaa |
284 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
28591095 |
gtaaaccagaattccgattcttctcaacaaaatctcccatcttcgccgaatccatgaaactcatcaa |
28591161 |
T |
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