View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19726_low_1 (Length: 1269)

Name: NF19726_low_1
Description: NF19726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19726_low_1
NF19726_low_1
[»] chr7 (28 HSPs)
chr7 (164-716)||(30957449-30957985)
chr7 (786-1253)||(30958055-30958521)
chr7 (32-167)||(36453122-36453257)
chr7 (32-166)||(27813955-27814089)
chr7 (32-167)||(47110594-47110729)
chr7 (32-166)||(25614352-25614486)
chr7 (32-165)||(10981652-10981785)
chr7 (32-166)||(40349106-40349239)
chr7 (368-664)||(30942296-30942592)
chr7 (30-136)||(27941013-27941119)
chr7 (36-165)||(16662241-16662370)
chr7 (36-165)||(17636601-17636730)
chr7 (30-130)||(3091655-3091755)
chr7 (1051-1138)||(11690030-11690117)
chr7 (32-130)||(24456800-24456898)
chr7 (1144-1253)||(11689819-11689928)
chr7 (60-166)||(16360549-16360654)
chr7 (30-107)||(8380080-8380157)
chr7 (1061-1142)||(30950517-30950598)
chr7 (1144-1248)||(30950709-30950813)
chr7 (32-107)||(3498813-3498888)
chr7 (127-170)||(27813806-27813849)
chr7 (50-92)||(6737252-6737294)
chr7 (32-130)||(7743433-7743531)
chr7 (76-154)||(28200488-28200566)
chr7 (30-136)||(35112438-35112544)
chr7 (32-106)||(46563253-46563327)
chr7 (127-168)||(25060148-25060189)
[»] chr4 (30 HSPs)
chr4 (30-166)||(21310563-21310699)
chr4 (30-167)||(25704793-25704930)
chr4 (32-167)||(22321266-22321401)
chr4 (30-165)||(40122487-40122622)
chr4 (32-166)||(14261188-14261322)
chr4 (32-166)||(24706246-24706380)
chr4 (32-165)||(12071704-12071837)
chr4 (32-167)||(44568981-44569116)
chr4 (32-163)||(21661537-21661668)
chr4 (32-163)||(21670301-21670432)
chr4 (30-155)||(50768004-50768129)
chr4 (32-168)||(20249011-20249147)
chr4 (30-164)||(21064903-21065037)
chr4 (32-165)||(19692866-19692999)
chr4 (32-165)||(19703451-19703584)
chr4 (40-149)||(31892384-31892493)
chr4 (32-168)||(18507263-18507399)
chr4 (32-158)||(6128956-6129082)
chr4 (71-165)||(50839031-50839125)
chr4 (36-166)||(32543627-32543757)
chr4 (32-120)||(34324627-34324716)
chr4 (34-136)||(48652370-48652472)
chr4 (30-107)||(38617857-38617934)
chr4 (130-167)||(39295418-39295455)
chr4 (32-104)||(1146177-1146249)
chr4 (72-163)||(20714322-20714413)
chr4 (40-106)||(30939197-30939263)
chr4 (56-126)||(51777772-51777841)
chr4 (55-88)||(17038377-17038410)
chr4 (129-166)||(34324617-34324654)
[»] chr2 (21 HSPs)
chr2 (30-166)||(22388137-22388273)
chr2 (32-169)||(23366933-23367070)
chr2 (32-167)||(3519051-3519186)
chr2 (30-168)||(1102643-1102781)
chr2 (32-168)||(39938314-39938450)
chr2 (30-165)||(37673743-37673878)
chr2 (32-165)||(1646431-1646564)
chr2 (32-165)||(12969740-12969873)
chr2 (52-165)||(40756911-40757024)
chr2 (30-165)||(39561895-39562025)
chr2 (40-168)||(28110092-28110220)
chr2 (30-159)||(37284525-37284652)
chr2 (56-162)||(36447426-36447532)
chr2 (32-128)||(19976472-19976568)
chr2 (32-135)||(34242118-34242221)
chr2 (30-104)||(28401396-28401470)
chr2 (35-158)||(4917908-4918031)
chr2 (34-136)||(14779922-14780023)
chr2 (72-130)||(32838964-32839022)
chr2 (32-110)||(1002786-1002864)
chr2 (40-106)||(43077331-43077397)
[»] chr1 (33 HSPs)
chr1 (32-167)||(40783655-40783790)
chr1 (30-165)||(321768-321903)
chr1 (32-165)||(23045279-23045412)
chr1 (32-168)||(284477-284613)
chr1 (32-171)||(47037846-47037985)
chr1 (34-166)||(23526385-23526517)
chr1 (32-159)||(27210961-27211088)
chr1 (36-168)||(24771903-24772035)
chr1 (36-168)||(33082892-33083024)
chr1 (32-160)||(46771782-46771910)
chr1 (34-168)||(40562283-40562416)
chr1 (32-130)||(40261320-40261418)
chr1 (32-166)||(51064753-51064887)
chr1 (32-165)||(31003787-31003920)
chr1 (32-165)||(18396838-18396971)
chr1 (32-165)||(27143014-27143145)
chr1 (30-128)||(40052501-40052599)
chr1 (33-158)||(23166858-23166983)
chr1 (32-165)||(34458724-34458857)
chr1 (34-160)||(14925610-14925734)
chr1 (41-158)||(24876714-24876831)
chr1 (34-158)||(31061463-31061590)
chr1 (32-168)||(1837824-1837961)
chr1 (38-158)||(25929248-25929368)
chr1 (71-129)||(1749457-1749515)
chr1 (32-96)||(3657218-3657282)
chr1 (74-129)||(14350510-14350565)
chr1 (103-168)||(41959788-41959853)
chr1 (103-165)||(3943742-3943804)
chr1 (108-166)||(9589615-9589673)
chr1 (114-168)||(44227845-44227899)
chr1 (34-92)||(49756684-49756742)
chr1 (127-165)||(51064995-51065033)
[»] chr8 (28 HSPs)
chr8 (32-165)||(7147057-7147190)
chr8 (32-165)||(40058303-40058436)
chr8 (32-165)||(40918731-40918864)
chr8 (32-168)||(43275396-43275532)
chr8 (32-167)||(30999522-30999657)
chr8 (32-168)||(2539927-2540063)
chr8 (32-167)||(11174221-11174356)
chr8 (32-167)||(11646323-11646458)
chr8 (32-166)||(36068224-36068358)
chr8 (32-165)||(37345715-37345848)
chr8 (32-168)||(3585595-3585731)
chr8 (32-166)||(27035139-27035273)
chr8 (34-150)||(20546308-20546424)
chr8 (30-147)||(27563885-27564002)
chr8 (32-166)||(35866757-35866891)
chr8 (32-165)||(28568062-28568195)
chr8 (32-165)||(28575655-28575788)
chr8 (32-159)||(26628822-26628949)
chr8 (32-169)||(28562565-28562702)
chr8 (33-170)||(45400765-45400902)
chr8 (32-129)||(13880991-13881088)
chr8 (52-136)||(10180897-10180981)
chr8 (1052-1138)||(37319239-37319325)
chr8 (37-148)||(30906706-30906817)
chr8 (30-160)||(39151544-39151667)
chr8 (103-167)||(41305760-41305824)
chr8 (75-137)||(37510457-37510519)
chr8 (32-89)||(28326734-28326791)
[»] chr5 (24 HSPs)
chr5 (32-165)||(40886610-40886743)
chr5 (32-167)||(12806851-12806986)
chr5 (32-166)||(30720491-30720625)
chr5 (32-165)||(36561099-36561232)
chr5 (34-166)||(25773795-25773927)
chr5 (32-166)||(10285057-10285190)
chr5 (32-165)||(25683229-25683362)
chr5 (30-166)||(23097723-23097859)
chr5 (33-167)||(37900621-37900755)
chr5 (30-163)||(16983399-16983532)
chr5 (30-165)||(734339-734474)
chr5 (30-168)||(11319698-11319836)
chr5 (32-159)||(39071026-39071153)
chr5 (30-166)||(1056624-1056758)
chr5 (32-154)||(16054255-16054377)
chr5 (55-165)||(26168075-26168185)
chr5 (52-146)||(30402981-30403075)
chr5 (56-134)||(11795314-11795392)
chr5 (36-102)||(7277486-7277552)
chr5 (36-110)||(11797694-11797768)
chr5 (51-92)||(12305687-12305728)
chr5 (103-166)||(15304821-15304884)
chr5 (30-109)||(21638911-21638990)
chr5 (32-106)||(25785928-25786002)
[»] chr3 (37 HSPs)
chr3 (32-165)||(46694110-46694243)
chr3 (32-166)||(36881424-36881558)
chr3 (32-165)||(13364987-13365120)
chr3 (34-166)||(29375278-29375410)
chr3 (32-166)||(23087930-23088064)
chr3 (32-166)||(19241667-19241801)
chr3 (32-165)||(3383220-3383353)
chr3 (32-165)||(198999-199132)
chr3 (30-166)||(13703354-13703490)
chr3 (56-167)||(48820508-48820619)
chr3 (32-150)||(43750280-43750398)
chr3 (32-165)||(18355868-18356001)
chr3 (32-165)||(32834989-32835122)
chr3 (32-142)||(31873886-31873995)
chr3 (30-167)||(48436366-48436503)
chr3 (32-159)||(48963263-48963390)
chr3 (30-154)||(54086694-54086818)
chr3 (52-159)||(6901725-6901831)
chr3 (80-166)||(26783661-26783747)
chr3 (32-110)||(52009105-52009183)
chr3 (37-155)||(27706999-27707116)
chr3 (32-156)||(24064367-24064488)
chr3 (34-128)||(53559648-53559742)
chr3 (59-130)||(1455186-1455257)
chr3 (32-124)||(37293555-37293644)
chr3 (34-104)||(37781082-37781152)
chr3 (37-110)||(52805082-52805155)
chr3 (103-167)||(19912153-19912217)
chr3 (103-167)||(38806320-38806384)
chr3 (30-89)||(40228280-40228339)
chr3 (32-89)||(46188910-46188967)
chr3 (30-106)||(43159891-43159967)
chr3 (133-168)||(37293434-37293469)
chr3 (103-165)||(12095402-12095464)
chr3 (32-106)||(23771326-23771400)
chr3 (32-106)||(32980679-32980753)
chr3 (103-165)||(44276775-44276837)
[»] chr6 (23 HSPs)
chr6 (32-168)||(8626626-8626762)
chr6 (32-166)||(13757351-13757485)
chr6 (32-167)||(1605722-1605857)
chr6 (32-167)||(15064693-15064828)
chr6 (32-165)||(4129571-4129703)
chr6 (32-165)||(7761444-7761577)
chr6 (32-165)||(29260336-29260469)
chr6 (30-166)||(17942585-17942721)
chr6 (32-165)||(31559738-31559871)
chr6 (32-158)||(8235769-8235895)
chr6 (32-165)||(30734483-30734616)
chr6 (1144-1247)||(7473246-7473349)
chr6 (1052-1142)||(7473060-7473150)
chr6 (32-166)||(20398237-20398371)
chr6 (36-165)||(3798247-3798376)
chr6 (32-168)||(26860908-26861044)
chr6 (57-166)||(1814762-1814871)
chr6 (41-110)||(847831-847900)
chr6 (103-166)||(19996321-19996384)
chr6 (73-162)||(24120645-24120734)
chr6 (127-167)||(15064933-15064973)
chr6 (32-106)||(31244877-31244951)
chr6 (59-92)||(879317-879350)
[»] scaffold1770 (1 HSPs)
scaffold1770 (32-165)||(306-438)
[»] scaffold0054 (1 HSPs)
scaffold0054 (36-170)||(45601-45735)
[»] scaffold0062 (1 HSPs)
scaffold0062 (32-145)||(287-400)
[»] scaffold0168 (1 HSPs)
scaffold0168 (32-167)||(7812-7947)
[»] scaffold0343 (1 HSPs)
scaffold0343 (30-155)||(6911-7035)
[»] scaffold0056 (1 HSPs)
scaffold0056 (36-155)||(71231-71350)
[»] scaffold0025 (1 HSPs)
scaffold0025 (52-131)||(65199-65278)
[»] scaffold0076 (1 HSPs)
scaffold0076 (30-166)||(15322-15458)
[»] scaffold0939 (1 HSPs)
scaffold0939 (57-131)||(1110-1184)
[»] scaffold0003 (1 HSPs)
scaffold0003 (32-106)||(252633-252707)
[»] scaffold0060 (1 HSPs)
scaffold0060 (30-110)||(10884-10964)
[»] scaffold1431 (1 HSPs)
scaffold1431 (32-63)||(1-32)
[»] scaffold0009 (1 HSPs)
scaffold0009 (39-106)||(147263-147330)
[»] scaffold0257 (1 HSPs)
scaffold0257 (103-165)||(23851-23913)


Alignment Details
Target: chr7 (Bit Score: 492; Significance: 0; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 492; E-Value: 0
Query Start/End: Original strand, 164 - 716
Target Start/End: Original strand, 30957449 - 30957985
Alignment:
Q  164 tattacaacatgaaacacaagcacataaatgaaaattttgctcatttaactccaacattgtctaaacttttccactgccaaacgcgtttgcaacacttat 263  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30957449 tattacaacatgaaacacaagcacataaatgaaaattttgctcatttaactccaacattgtctaaacttttccactgccaaacgcgtttgcaacacttat 30957548  T
Q  264 ttcaacacactctttcagacacacactctcttattggtttaatacaataaaaaagtgagtgttaaaaatagtgtgttaaaacaagtgttgccaacattac 363  Q
    ||||||||                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30957549 ttcaacac----------------actctcttattggtttaatacaataaaaaagtgagtgttaaaaatagtgtgttaaaacaagtgttgccaacattac 30957632  T
Q  364 tctaatttaagatgcatcaaaatggcccaaaagacgagtacaacactctgcacacggatgaatggtacaccaacaagaatcatgattgcaacggcccaaa 463  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30957633 tctaatttaagatgcatcaaaatggcccaaaagacgagtacaacactctgcacacggatgaatggtacaccaacaagaatcatgattgcaacggcccaaa 30957732  T
Q  464 caaaccccatataaccaaaaagccctagcaaggagtcccatatggaaacactttggaccatcacatgtggtggcttgatccacaagtcaaggaaaagaca 563  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30957733 caaacaccataaaaccaaaaagccctagcaaggagtcccatatggaaacactttggaccatcacatgtggtggcttgatccacaagtcaaggaaaagaca 30957832  T
Q  564 acagaaaataatgctcaagactacaacaaatgaaacatgttgtgcaatttccttacgtttctgctgaaatataggatatgatttaggaatggtttccttg 663  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30957833 acagaaaataatgctcaagactacaacaaatgaaacatgttgtgcaatttccttacgtttctgctgaaatataggatatgatttaggaatggtttccttg 30957932  T
Q  664 tggttcttatggaaaaatgacttcaggtaatgagattcctctccgaggagctg 716  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30957933 tggttcttatggaaaaatgacttcaggtaatgagattcctctccgaggagctg 30957985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 786 - 1253
Target Start/End: Original strand, 30958055 - 30958521
Alignment:
Q  786 cgaagacaatagtaatatcttttagaaatgataaaaactcataccagtttcataaatttcagcataaaagcttgtaaaatgacatgctaagaactgataa 885  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30958055 cgaagacaatagtaatatcttttagaaatgataaaa-ctcataccagtttcataaatttcagcataaaagcttgtaaaatgacatgctaagaactgataa 30958153  T
Q  886 aagaaaactagaaatggatgtgtataacgtaccgaaacatttttctcattcgaactcatcttatcgtcttcaaactttccctgcggaatttgaacagcca 985  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30958154 aagaaaactagaaatggatgtgtataacgtaccgaaacatttttctcattcgaactcatcttatcgtcttcaaactttccctgcggaatttgaacagcca 30958253  T
Q  986 ttgaatcaaagcttaaaagatgaaacagaagtagtggttctggaacttcaaggataacaaaagtttaaatccctatgaacaagcaatatccattattggg 1085  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30958254 tcgaatcaaagcttaaaagatgaaacagaagtagtggttctggaacttcaaggataacaaaagtttaaatccctatgaacaagcaatatccattattggg 30958353  T
Q  1086 aaaaccttggctccatttgccgaggataacttgattccttgttttggatttggggattcatcaacacatgatcaagaagtcttcggtttgtatccggatg 1185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30958354 aaaaccttggctccatttgccgaggataacttgattccttgttttggatttggggattcatcaacacatgatcaagaagtcttcggtttgtatccggatg 30958453  T
Q  1186 aaagactttgcaatggatttgaagaagttttgagtcggtatagggagattgttcctaatattcgactt 1253  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30958454 aaagactttgcaatggatttgaagaagttttgagtcggtatagggaaattgttcctaatattcgactt 30958521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 6e-68
Query Start/End: Original strand, 32 - 167
Target Start/End: Complemental strand, 36453257 - 36453122
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36453257 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 36453158  T
Q  132 taaaatggacaagtattatgaaacggagggagtatt 167  Q
    |||||||||||||||||||||||||||| |||||||    
T  36453157 taaaatggacaagtattatgaaacggagagagtatt 36453122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 32 - 166
Target Start/End: Original strand, 27813955 - 27814089
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27813955 tctctctacaataaatatgcaagggtattattgacaacacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 27814054  T
Q  132 taaaatggacaagtattatgaaacggagggagtat 166  Q
    |||||||||||||||||||||||||||||||||||    
T  27814055 taaaatggacaagtattatgaaacggagggagtat 27814089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 2e-65
Query Start/End: Original strand, 32 - 167
Target Start/End: Original strand, 47110594 - 47110729
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47110594 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 47110693  T
Q  132 taaaatggacaagtattatgaaacggagggagtatt 167  Q
    ||||||| | ||||||||||||||||||||||||||    
T  47110694 taaaatgaataagtattatgaaacggagggagtatt 47110729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 32 - 166
Target Start/End: Complemental strand, 25614486 - 25614352
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25614486 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttaaaagtgacaagtattgtgaaacaaaattattctc 25614387  T
Q  132 taaaatggacaagtattatgaaacggagggagtat 166  Q
    |||||||||||| ||||||||||||||||||||||    
T  25614386 taaaatggacaattattatgaaacggagggagtat 25614352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 10981652 - 10981785
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10981652 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 10981751  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    |||||||||||| |||||||||| ||||||||||    
T  10981752 taaaatggacaaatattatgaaatggagggagta 10981785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 32 - 166
Target Start/End: Original strand, 40349106 - 40349239
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  40349106 tctctctacaataaatatgcaagggtattattgaccaaacaataattaatgttgcattgaaacttaaaagtgacaagtattgtgaaac-aaattattctc 40349204  T
Q  132 taaaatggacaagtattatgaaacggagggagtat 166  Q
    |||||||||||||||||||||||||||||||||||    
T  40349205 taaaatggacaagtattatgaaacggagggagtat 40349239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 8e-52
Query Start/End: Original strand, 368 - 664
Target Start/End: Original strand, 30942296 - 30942592
Alignment:
Q  368 atttaagatgcatcaaaatggcccaaaagacgagtacaacactctgcacacggatgaatggtacaccaacaagaatcatgattgcaacggcccaaacaaa 467  Q
    ||||||||||||||||||| ||||| ||||  |  ||||| |||||||| |||| ||| |||||||||||||||||||| || |||||||||||||||||    
T  30942296 atttaagatgcatcaaaatagcccagaagataaacacaaccctctgcactcggacgaagggtacaccaacaagaatcattatagcaacggcccaaacaaa 30942395  T
Q  468 ccccatataaccaaaaagccctagcaaggagtcccatatggaaacactttggaccatcacatgtggtggcttgatccacaagtcaaggaaaagacaacag 567  Q
    | ||||| ||||||||| ||  ||  ||||  ||||||| | | ||| ||||||| ||| | ||  ||||| |||||||| ||||| ||||||  |||      
T  30942396 cgccataaaaccaaaaaacctgagtgaggacacccatattggaccacgttggaccttcataagtaatggctcgatccacatgtcaaagaaaagggaacca 30942495  T
Q  568 aaaataatgctcaagactacaacaaatgaaacatgttgtgcaatttccttacgtttctgctgaaatataggatatgatttaggaatggtttccttgt 664  Q
    || | |||| |||||||||||||||||||||||| |||||||||||||| |||||| |||| |||| ||||||||||| | || |||||||||||||    
T  30942496 aataaaatggtcaagactacaacaaatgaaacatattgtgcaatttcctcacgtttgtgcttaaatttaggatatgatcttggcatggtttccttgt 30942592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 27941119 - 27941013
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||| ||||||||||||| | |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||    
T  27941119 tttctttctacaataaataagtaagggtattattgacaagccaataattaatgttgcaatgaaacttgaaagtgacaagtaatgtgaaacaaaattgttc 27941020  T
Q  130 tctaaaa 136  Q
    || ||||    
T  27941019 tccaaaa 27941013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 36 - 165
Target Start/End: Original strand, 16662241 - 16662370
Alignment:
Q  36 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaa 135  Q
    ||||||||||||| | |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||  |||    
T  16662241 tctacaataaataggtaagggtattaatgacaaatcaataattaatgttgcattgaaacttgaaagtgacaagtaatttaaaacaaaattattcttcaaa 16662340  T
Q  136 atggacaagtattatgaaacggagggagta 165  Q
    |  |||||||||| ||||| ||||||||||    
T  16662341 agtgacaagtattgtgaaatggagggagta 16662370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 36 - 165
Target Start/End: Original strand, 17636601 - 17636730
Alignment:
Q  36 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaa 135  Q
    ||||||||||||| | |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||  |||    
T  17636601 tctacaataaataggtaagggtattaatgacaaatcaataattaatgttgcattgaaacttgaaagtgacaagtaatttaaaacaaaattattcttcaaa 17636700  T
Q  136 atggacaagtattatgaaacggagggagta 165  Q
    |  |||||||||| ||||| ||||||||||    
T  17636701 agtgacaagtattgtgaaatggagggagta 17636730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 30 - 130
Target Start/End: Original strand, 3091655 - 3091755
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||||||||||||||||||| |||||||||||||||||  ||||| |||||||||||||||||||| ||| |||||||||  |||||||||||||||||    
T  3091655 tttctctctacaataaatatgtaagggtattattgacaaaccaatatttaatgttgcattgaaacttaaaaatgacaagtaaagtgaaacaaaattattc 3091754  T
Q  130 t 130  Q
    |    
T  3091755 t 3091755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 1051 - 1138
Target Start/End: Complemental strand, 11690117 - 11690030
Alignment:
Q  1051 taaatccctatgaacaagcaatatccattattgggaaaaccttggctccatttgccgaggataacttgattccttgttttggatttgg 1138  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||   |||||  || ||||||||||| |||||||||||||||||    
T  11690117 taaatccctatgaacaagcaatatcaattattgggaaaaccatggcagaatttgatgacgataacttgataccttgttttggatttgg 11690030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 24456898 - 24456800
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattct 130  Q
    ||||||||||||| ||| |||||||||||||||| ||   | || |||||||||||||||||||||| |||||||||||  || |||||||||||||||    
T  24456898 tctctctacaatacataggcaagggtattattgataaattagtagttaatgttgcattgaaacttgagagtgacaagtaaagttaaacaaaattattct 24456800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 1144 - 1253
Target Start/End: Complemental strand, 11689928 - 11689819
Alignment:
Q  1144 catcaacacatgatcaagaagtcttcggtttgtatccggatgaaagactttgcaatggatttgaagaagttttgagtcggtatagggagattgttcctaa 1243  Q
    ||||||| ||||||||||| || ||| |||| ||||| |||| |||  ||||||||||||||||||| ||  |||||||||||||||| ||||||||| |    
T  11689928 catcaacgcatgatcaagatgtattcagtttctatcctgatggaagtttttgcaatggatttgaagacgtgctgagtcggtatagggaaattgttcctca 11689829  T
Q  1244 tattcgactt 1253  Q
    | ||||||||    
T  11689828 tcttcgactt 11689819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 60 - 166
Target Start/End: Original strand, 16360549 - 16360654
Alignment:
Q  60 tattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggag 159  Q
    |||||||||  ||||| ||||||||| ||||||||||||||||||||||||  ||||| | ||||||||||| ||||  ||||| |||| |||||| ||     
T  16360549 tattgacaaaccaatatttaatgttgtattgaaacttgaaagtgacaagtaaagtgaagc-aaattattctccaaaaacgacaaatattgtgaaacagaa 16360647  T
Q  160 ggagtat 166  Q
    |||||||    
T  16360648 ggagtat 16360654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 8380080 - 8380157
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaa 107  Q
    ||||||||||||||||||| | ||||||||| || ||||  |||||| |||||||| |||||||||| ||||||||||    
T  8380080 tttctctctacaataaataagtaagggtatttttaacaaaccaataactaatgttgtattgaaacttaaaagtgacaa 8380157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 1061 - 1142
Target Start/End: Original strand, 30950517 - 30950598
Alignment:
Q  1061 tgaacaagcaatatccattattgggaaaaccttggctccatttgccgaggataacttgattccttgttttggatttggggat 1142  Q
    |||| ||||||||||||||||||| ||||  ||  ||||||||   || |||||||||||||||||||||||||||||||||    
T  30950517 tgaaaaagcaatatccattattggaaaaaagttctctccatttctggatgataacttgattccttgttttggatttggggat 30950598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1144 - 1248
Target Start/End: Original strand, 30950709 - 30950813
Alignment:
Q  1144 catcaacacatgatcaagaagtcttcggtttgtatccggatgaaagactttgcaatggatttgaagaagttttgagtcggtatagggagattgttcctaa 1243  Q
    ||||||||  |||||| || |||||  |||| ||||  || |||||| |||||||||||  ||||||| ||||||||||||||||||| |||  ||||||    
T  30950709 catcaacaagtgatcacgatgtctttagtttctatcgagacgaaagattttgcaatggacatgaagaaattttgagtcggtatagggaaattcgtcctaa 30950808  T
Q  1244 tattc 1248  Q
    |||||    
T  30950809 tattc 30950813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 3498888 - 3498813
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaa 107  Q
    ||||| || |||||||||| ||| ||||||| || ||  ||||||||||| ||||||||||| ||||| |||||||    
T  3498888 tctctttaaaataaatatgtaagagtattatcgataaatcaataattaattttgcattgaaagttgaatgtgacaa 3498813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 27813849 - 27813806
Alignment:
Q  127 ttctctaaaatggacaagtattatgaaacggagggagtattaca 170  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||    
T  27813849 ttctccaaaatggacatgtattttgaaacggagggagtattaca 27813806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 6737252 - 6737294
Alignment:
Q  50 gcaagggtattattgacaagacaataattaatgttgcattgaa 92  Q
    |||||||||||||||| || |||||||||||| ||||||||||    
T  6737252 gcaagggtattattgataaaacaataattaatattgcattgaa 6737294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 7743531 - 7743433
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattct 130  Q
    ||||||||||||||||||    | |||||| ||| ||  ||||||||||  |||||||||||||| ||| |||||| ||  |||||| |||||||||||    
T  7743531 tctctctacaataaatatatctgagtattactgagaatccaataattaacattgcattgaaacttaaaaatgacaaataaagtgaaataaaattattct 7743433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 154
Target Start/End: Original strand, 28200488 - 28200566
Alignment:
Q  76 attaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaa 154  Q
    ||||||| || ||| |||||| |||||||||||||  ||||||||||||| ||||  ||||  ||||| ||||||||||    
T  28200488 attaatgctgtattaaaacttaaaagtgacaagtaaagtgaaacaaaattgttcttaaaaaacgacaaatattatgaaa 28200566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 35112544 - 35112438
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    |||||||| ||||||||||   ||||||| |||||  || |||||| ||||||||||| ||||  ||||||||||||  ||   |||||||||||| |||    
T  35112544 tttctctccacaataaataactaagggtaatattggtaaaacaatatttaatgttgcaatgaactttgaaagtgacagttaaattgaaacaaaatttttc 35112445  T
Q  130 tctaaaa 136  Q
    || ||||    
T  35112444 tccaaaa 35112438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 46563253 - 46563327
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 106  Q
    |||||||||||||||||  |||||||| || || ||| |||||| ||||||||| | ||||  ||||||||||||    
T  46563253 tctctctacaataaataatcaagggtaataatgtcaaaacaatatttaatgttgtactgaactttgaaagtgaca 46563327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 25060148 - 25060189
Alignment:
Q  127 ttctctaaaatggacaagtattatgaaacggagggagtatta 168  Q
    ||||| |||||||||| ||||| |||||||||||||||||||    
T  25060148 ttctccaaaatggacatgtattttgaaacggagggagtatta 25060189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 6e-71; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 6e-71
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 21310563 - 21310699
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21310563 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 21310662  T
Q  130 tctaaaatggacaagtattatgaaacggagggagtat 166  Q
    |||||||||||||||||||||||||||||||||||||    
T  21310663 tctaaaatggacaagtattatgaaacggagggagtat 21310699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 25704793 - 25704930
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25704793 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcactgaaacttgaaagtgacaagtattgtgaaacaaaattattc 25704892  T
Q  130 tctaaaatggacaagtattatgaaacggagggagtatt 167  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25704893 tctaaaatggacaagtattatgaaacggagggagtatt 25704930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 6e-68
Query Start/End: Original strand, 32 - 167
Target Start/End: Complemental strand, 22321401 - 22321266
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22321401 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 22321302  T
Q  132 taaaatggacaagtattatgaaacggagggagtatt 167  Q
    |||||| |||||||||||||||||||||||||||||    
T  22321301 taaaatagacaagtattatgaaacggagggagtatt 22321266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 132; E-Value: 6e-68
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 40122622 - 40122487
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40122622 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 40122523  T
Q  130 tctaaaatggacaagtattatgaaacggagggagta 165  Q
    |||||||||||||||||||||||||||||| |||||    
T  40122522 tctaaaatggacaagtattatgaaacggagagagta 40122487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 32 - 166
Target Start/End: Original strand, 14261188 - 14261322
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14261188 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctc 14261287  T
Q  132 taaaatggacaagtattatgaaacggagggagtat 166  Q
    |||||||||||||||||||||||||||||||||||    
T  14261288 taaaatggacaagtattatgaaacggagggagtat 14261322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 32 - 166
Target Start/End: Complemental strand, 24706380 - 24706246
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24706380 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctc 24706281  T
Q  132 taaaatggacaagtattatgaaacggagggagtat 166  Q
    |||||||||||||||||||||||||||||||||||    
T  24706280 taaaatggacaagtattatgaaacggagggagtat 24706246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 130; E-Value: 1e-66
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 12071704 - 12071837
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12071704 tctctctacaataaatatgcaagggtattattgacaagacaagaattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 12071803  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    ||||||||||||||||||||||||||||||||||    
T  12071804 taaaatggacaagtattatgaaacggagggagta 12071837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 128; E-Value: 2e-65
Query Start/End: Original strand, 32 - 167
Target Start/End: Original strand, 44568981 - 44569116
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  44568981 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacatgaaagggacaagtattgtgaaacaaaattattctc 44569080  T
Q  132 taaaatggacaagtattatgaaacggagggagtatt 167  Q
    ||||||||||||||||||||||||||||||||||||    
T  44569081 taaaatggacaagtattatgaaacggagggagtatt 44569116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 120; E-Value: 9e-61
Query Start/End: Original strand, 32 - 163
Target Start/End: Complemental strand, 21661668 - 21661537
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  21661668 tctctctacaataaatatgcaagggtattattgacaagacaatacttaatgttgcattgaaacttgaaagtgataaatattgtgaaacaaaattattctc 21661569  T
Q  132 taaaatggacaagtattatgaaacggagggag 163  Q
    ||||||||||||||||||||||||||||||||    
T  21661568 taaaatggacaagtattatgaaacggagggag 21661537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 120; E-Value: 9e-61
Query Start/End: Original strand, 32 - 163
Target Start/End: Complemental strand, 21670432 - 21670301
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  21670432 tctctctacaataaatatgcaagggtattattgacaagacaatacttaatgttgcattgaaacttgaaagtgataaatattgtgaaacaaaattattctc 21670333  T
Q  132 taaaatggacaagtattatgaaacggagggag 163  Q
    ||||||||||||||||||||||||||||||||    
T  21670332 taaaatggacaagtattatgaaacggagggag 21670301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 30 - 155
Target Start/End: Original strand, 50768004 - 50768129
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50768004 tttctctctacaataaatatgtaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattc 50768103  T
Q  130 tctaaaatggacaagtattatgaaac 155  Q
    ||||||||||||||||||||||||||    
T  50768104 tctaaaatggacaagtattatgaaac 50768129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 32 - 168
Target Start/End: Complemental strand, 20249147 - 20249011
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  20249147 tctctctacaataaatatgtaagggtattattgacaagacaataattaatattgcattgaaacttgaaagagacaggtattgtgaaacaaaattattctc 20249048  T
Q  132 taaaatggacaagtattatgaaacggagggagtatta 168  Q
     ||||||||||||||||||||||||||| ||||||||    
T  20249047 caaaatggacaagtattatgaaacggagtgagtatta 20249011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 107; E-Value: 5e-53
Query Start/End: Original strand, 30 - 164
Target Start/End: Original strand, 21064903 - 21065037
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||    
T  21064903 tttctctctacaataaatatgtaagagtattattgtcaagacaataattaatgttgcattgaaatttgaaagcgataagtattgtgaaacaaaattattc 21065002  T
Q  130 tctaaaatggacaagtattatgaaacggagggagt 164  Q
    ||||||||| |||||||||||||||||||||||||    
T  21065003 tctaaaatgaacaagtattatgaaacggagggagt 21065037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 19692866 - 19692999
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||| | |||||| ||||||| ||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  19692866 tctctctacaataaataagtaagggtgttattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctc 19692965  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    |||||| |||||||||| ||| ||||| ||||||    
T  19692966 taaaatagacaagtattgtgatacggatggagta 19692999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 19703451 - 19703584
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||| | |||||| ||||||| ||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  19703451 tctctctacaataaataagtaagggtgttattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctc 19703550  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    |||||| |||||||||| ||| ||||| ||||||    
T  19703551 taaaatagacaagtattgtgatacggatggagta 19703584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 40 - 149
Target Start/End: Original strand, 31892384 - 31892493
Alignment:
Q  40 caataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatgg 139  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| |||||||||||||||| || || |    
T  31892384 caataaatatgcaaggctattattgacaagacaataattaatgttacattaaaacttaaaagtgacaagtattgtaaaacaaaattattctccaagatag 31892483  T
Q  140 acaagtatta 149  Q
    ||||||||||    
T  31892484 acaagtatta 31892493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 32 - 168
Target Start/End: Complemental strand, 18507399 - 18507263
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||| |||||||| | |||  ||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||    
T  18507399 tctctctataataaataagtaagaatattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagaaatgtgaaacaaaattatgctc 18507300  T
Q  132 taaaatggacaagtattatgaaacggagggagtatta 168  Q
    |||||  |||||||||| |||||| |||  |||||||    
T  18507299 taaaagcgacaagtattgtgaaacagagtaagtatta 18507263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 32 - 158
Target Start/End: Complemental strand, 6129082 - 6128956
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||   |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||     
T  6129082 tctctctacaataaatagataagggtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctt 6128983  T
Q  132 taaaatggacaagtattatgaaacgga 158  Q
     ||||  |||| ||||| |||||||||    
T  6128982 caaaagcgacatgtattgtgaaacgga 6128956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 71 - 165
Target Start/End: Complemental strand, 50839125 - 50839031
Alignment:
Q  71 caataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 165  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||  |||||||||| ||||| ||||||||||    
T  50839125 caataattaatgttgcattgaaacttgaaaatgacaagtaatgtgaaacaaaattattctccaaaagcgacaagtattgtgaaatggagggagta 50839031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 36 - 166
Target Start/End: Original strand, 32543627 - 32543757
Alignment:
Q  36 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaa 135  Q
    |||||||||||||   |||||||||| ||||||  ||||||||||||| ||||| |||||||||||| |||||||   ||||||||||||||||||||||    
T  32543627 tctacaataaatagataagggtattaatgacaaaccaataattaatgtcgcattaaaacttgaaagtaacaagtaaaatgaaacaaaattattctctaaa 32543726  T
Q  136 atggacaagtattatgaaacggagggagtat 166  Q
    |  |||||||||| |||||| || |||||||    
T  32543727 agcgacaagtattgtgaaacagaaggagtat 32543757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 34324716 - 34324627
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaact-tgaaagtgacaagtattgtgaaaca 120  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| | |||  |||||||||| |||||||    
T  34324716 tctctctacaataaatatgcaagggtattattgacaagaaaatcattaatgttgcattgaaactctaaaatggacaagtattatgaaaca 34324627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 48652370 - 48652472
Alignment:
Q  34 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctcta 133  Q
    |||||||  |||||| | |||||||||||| | ||  ||||||||||||| ||||| |||||| ||||| |||||||  ||||||||||||||||||| |    
T  48652370 tctctacgttaaataggtaagggtattattaataaatcaataattaatgtcgcattaaaactttaaagtaacaagtaaagtgaaacaaaattattctcca 48652469  T
Q  134 aaa 136  Q
    |||    
T  48652470 aaa 48652472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 38617934 - 38617857
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaa 107  Q
    ||||||||| ||||||||||  |||| || |||||| || |||||| ||||||||||||| ||  |||||||||||||    
T  38617934 tttctctctgcaataaatatataaggataatattgataaaacaatatttaatgttgcattaaactttgaaagtgacaa 38617857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 39295418 - 39295455
Alignment:
Q  130 tctaaaatggacaagtattatgaaacggagggagtatt 167  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  39295418 tctaaaatggacaagtattatgaaacggaaggagtatt 39295455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 1146177 - 1146249
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtga 104  Q
    |||||||||||||||||  |||||||| ||  | ||| |||| | ||||||||||||||||| ||||||||||    
T  1146177 tctctctacaataaataatcaagggtaataaaggcaaaacaacatttaatgttgcattgaaatttgaaagtga 1146249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 163
Target Start/End: Complemental strand, 20714413 - 20714322
Alignment:
Q  72 aataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggag 163  Q
    |||||||||||||||||||||| || ||| ||| || || | ||||| ||| |||||||||||||  ||||  |||| ||||||| ||||||    
T  20714413 aataattaatgttgcattgaaatttaaaaatgataaataatatgaaataaatttattctctaaaagtgacagatattgtgaaacgtagggag 20714322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 30939263 - 30939197
Alignment:
Q  40 caataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 106  Q
    |||||||||| |||||||| |||||  || |||| | ||||||||||||||||  ||||||||||||    
T  30939263 caataaatatccaagggtaatattggtaaaacaacatttaatgttgcattgaactttgaaagtgaca 30939197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 51777772 - 51777841
Alignment:
Q  56 gtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaatta 126  Q
    |||||||||||||  ||||||||||||||||| |  ||||| |||||||||||||  || |||||||||||    
T  51777772 gtattattgacaaaccaataattaatgttgcact-taacttaaaagtgacaagtaaagtaaaacaaaatta 51777841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 88
Target Start/End: Complemental strand, 17038410 - 17038377
Alignment:
Q  55 ggtattattgacaagacaataattaatgttgcat 88  Q
    ||||||||||| ||||||||||||||||||||||    
T  17038410 ggtattattgataagacaataattaatgttgcat 17038377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 34324654 - 34324617
Alignment:
Q  129 ctctaaaatggacaagtattatgaaacggagggagtat 166  Q
    ||||||||||||||||||||||||||| || |||||||    
T  34324654 ctctaaaatggacaagtattatgaaacagatggagtat 34324617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 137; Significance: 6e-71; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 6e-71
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 22388273 - 22388137
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22388273 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 22388174  T
Q  130 tctaaaatggacaagtattatgaaacggagggagtat 166  Q
    |||||||||||||||||||||||||||||||||||||    
T  22388173 tctaaaatggacaagtattatgaaacggagggagtat 22388137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 23366933 - 23367070
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23366933 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgtattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 23367032  T
Q  132 taaaatggacaagtattatgaaacggagggagtattac 169  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23367033 taaaatggacaagtattatgaaacggagggagtattac 23367070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 2e-65
Query Start/End: Original strand, 32 - 167
Target Start/End: Original strand, 3519051 - 3519186
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3519051 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttacattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 3519150  T
Q  132 taaaatggacaagtattatgaaacggagggagtatt 167  Q
    ||||||||||||||||||||||||||||| ||||||    
T  3519151 taaaatggacaagtattatgaaacggaggaagtatt 3519186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 30 - 168
Target Start/End: Original strand, 1102643 - 1102781
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1102643 tttctctctacaataaatatgcaagggtgttattgacaagacaataattaatgttgcattgaaacttgaaagtgacgagtattgtgaaacaaaattattc 1102742  T
Q  130 tctaaaatggacaagtattatgaaacggagggagtatta 168  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  1102743 tctcaaatggacaagtattatgaaacggagggagtatta 1102781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 125; E-Value: 9e-64
Query Start/End: Original strand, 32 - 168
Target Start/End: Original strand, 39938314 - 39938450
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  39938314 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattaaaacttaaaagtgacaagtattgtgaaacaaaattattctc 39938413  T
Q  132 taaaatggacaagtattatgaaacggagggagtatta 168  Q
    ||||||||||||||||||| |||||||||||||||||    
T  39938414 taaaatggacaagtattataaaacggagggagtatta 39938450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 120; E-Value: 9e-61
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 37673878 - 37673743
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  37673878 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttggaagtgacaagtattttgaaacaaagttattc 37673779  T
Q  130 tctaaaatggacaagtattatgaaacggagggagta 165  Q
    ||||||||||||||||||||||||||||| ||||||    
T  37673778 tctaaaatggacaagtattatgaaacggaaggagta 37673743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 1646431 - 1646564
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1646431 tctctctacaataaatatgcaagggtattattgacaagataatacttaatgttgcattgaaacttgaaagtgataagtattgtgaaacaaaattattctc 1646530  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    ||||||||||| ||||||||||||||||||||||    
T  1646531 taaaatggacaggtattatgaaacggagggagta 1646564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 12969873 - 12969740
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  12969873 tctctctacaataaatatttaagggtattattgagaagacaataattaatattgcattgaaacttgaaagagacatgtattgtgaaacaaaattattctc 12969774  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
     |||||||||||||||||||||||||||||||||    
T  12969773 caaaatggacaagtattatgaaacggagggagta 12969740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 52 - 165
Target Start/End: Complemental strand, 40757024 - 40756911
Alignment:
Q  52 aagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatg 151  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||| |||||||||||||||||||    
T  40757024 aagggtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaactaaagtgaaacaaaattattctccaaaatggacaagtattatg 40756925  T
Q  152 aaacggagggagta 165  Q
    ||||||||||||||    
T  40756924 aaacggagggagta 40756911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 39562025 - 39561895
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||| || ||||||||||     |||||||||||||||||    
T  39562025 tttctctctacaataaataagtaagggtattattgacaaaccaataattaatgttgcattgaaatttaaaagtgacaa-----gtgaaacaaaattattc 39561931  T
Q  130 tctaaaatggacaagtattatgaaacggagggagta 165  Q
    || ||||  |||| ||||| ||||||||||||||||    
T  39561930 tccaaaaacgacatgtattgtgaaacggagggagta 39561895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 40 - 168
Target Start/End: Complemental strand, 28110220 - 28110092
Alignment:
Q  40 caataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatgg 139  Q
    ||||||||||| |||||||||||||| ||  |||||||||||||||||||||||||||||| ||||||||| ||||||||||  || ||||| ||||  |    
T  28110220 caataaatatgtaagggtattattgataaaccaataattaatgttgcattgaaacttgaaaatgacaagtaatgtgaaacaagttttttctccaaaaacg 28110121  T
Q  140 acaagtattatgaaacggagggagtatta 168  Q
    | || |||| ||||||||||| |||||||    
T  28110120 ataaatattgtgaaacggaggaagtatta 28110092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 30 - 159
Target Start/End: Complemental strand, 37284652 - 37284525
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||||||||||||||||| | ||| |||||| ||| ||  ||||||| |||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  37284652 tttctctctacaataaataggtaagagtattagtgataaatcaataat-aatgttgcattgaaacttgaaaatgacaagtaaagtgaaacaaaattattc 37284554  T
Q  130 tctaaaatggacaagtattatgaaacggag 159  Q
    || ||||  || ||||||| ||||||||||    
T  37284553 tccaaaagaga-aagtattgtgaaacggag 37284525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 56 - 162
Target Start/End: Original strand, 36447426 - 36447532
Alignment:
Q  56 gtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaac 155  Q
    |||||||||| ||  ||||||||||  ||||||||||| ||||||||||| | ||  ||||||||||||||||||||||||  |||| ||||| ||||||    
T  36447426 gtattattgataaaccaataattaacattgcattgaaatttgaaagtgacgaataaagtgaaacaaaattattctctaaaagcgacatgtattgtgaaac 36447525  T
Q  156 ggaggga 162  Q
    |||||||    
T  36447526 ggaggga 36447532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 19976472 - 19976568
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 128  Q
    |||||||||||||||||   || | ||||||||| ||   |||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  19976472 tctctctacaataaatagataatgatattattgataaactaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattatt 19976568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 34242118 - 34242221
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||| | |||| ||||||||| ||  ||||| ||||| ||||||| |||||| |||||||| ||||   ||||||||||||||||||    
T  34242118 tctctctacaataaataggtaaggatattattgataaaccaatatttaatattgcattaaaacttaaaagtgaccagtaaaatgaaacaaaattattctc 34242217  T
Q  132 taaa 135  Q
    ||||    
T  34242218 taaa 34242221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 28401470 - 28401396
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtga 104  Q
    ||||||| |||||||| || |||||||||||||||||||  ||||||||||||| || |||||||||||||||||    
T  28401470 tttctctttacaataattaggcaagggtattattgacaaatcaataattaatgtggccttgaaacttgaaagtga 28401396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 158
Target Start/End: Original strand, 4917908 - 4918031
Alignment:
Q  35 ctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaa 134  Q
    |||||| ||||||| | ||||| | |||||||||| ||||||||||||||| ||| ||| | |||||||||||||| |||||| ||||||| || |  ||    
T  4917908 ctctaccataaataggtaagggaactattgacaagccaataattaatgttgaattaaaattcgaaagtgacaagtaatgtgaagcaaaattgtttttcaa 4918007  T
Q  135 aatggacaagtattatgaaacgga 158  Q
    ||  ||||| |||| |||||||||    
T  4918008 aaatgacaaatattgtgaaacgga 4918031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 14779922 - 14780023
Alignment:
Q  34 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctcta 133  Q
    |||||||| |||||| ||||||||||| || ||||   |||  ||||| ||||||||||||||||||||||||||||   |||||||||||||||||| |    
T  14779922 tctctacagtaaataggcaagggtatt-ttaacaaacaaatcgttaatcttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctcca 14780020  T
Q  134 aaa 136  Q
    |||    
T  14780021 aaa 14780023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 32839022 - 32838964
Alignment:
Q  72 aataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattct 130  Q
    |||||||||| ||||||||||||||||||||||||||||   |||||||||||||||||    
T  32839022 aataattaatattgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattct 32838964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 1002864 - 1002786
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagta 110  Q
    |||||||||||||||||   |||| ||| ||| | ||  ||||||||||||||||||||| | |||||| |||||||||    
T  1002864 tctctctacaataaatagataaggatataattaataaaccaataattaatgttgcattgagatttgaaaatgacaagta 1002786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 43077397 - 43077331
Alignment:
Q  40 caataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 106  Q
    ||||||||||  ||||||| |||||  || |||||| ||||||||||||||||  ||||||||||||    
T  43077397 caataaatatctaagggtaatattggtaaaacaatatttaatgttgcattgaactttgaaagtgaca 43077331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 3e-70; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 3e-70
Query Start/End: Original strand, 32 - 167
Target Start/End: Complemental strand, 40783790 - 40783655
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40783790 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 40783691  T
Q  132 taaaatggacaagtattatgaaacggagggagtatt 167  Q
    ||||||||||||||||||||||||||||||||||||    
T  40783690 taaaatggacaagtattatgaaacggagggagtatt 40783655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 6e-68
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 321768 - 321903
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  321768 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaaatattc 321867  T
Q  130 tctaaaatggacaagtattatgaaacggagggagta 165  Q
    ||||||||||||||||||||||||||||||||||||    
T  321868 tctaaaatggacaagtattatgaaacggagggagta 321903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 1e-66
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 23045412 - 23045279
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23045412 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctc 23045313  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    ||||||||||||||||||||||||||||||||||    
T  23045312 taaaatggacaagtattatgaaacggagggagta 23045279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 9e-64
Query Start/End: Original strand, 32 - 168
Target Start/End: Original strand, 284477 - 284613
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  284477 tctctctacaataaatatgcaagggtattattgataagtcaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctc 284576  T
Q  132 taaaatggacaagtattatgaaacggagggagtatta 168  Q
    |||||||||||||||||||||||||||||||||||||    
T  284577 taaaatggacaagtattatgaaacggagggagtatta 284613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 4e-63
Query Start/End: Original strand, 32 - 171
Target Start/End: Complemental strand, 47037985 - 47037846
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  47037985 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtaaaacaaaattattctt 47037886  T
Q  132 taaaatggacaagtattatgaaacggagggagtattacaa 171  Q
    |||||| ||||||||||||||||||||||||||| |||||    
T  47037885 taaaatagacaagtattatgaaacggagggagtagtacaa 47037846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 34 - 166
Target Start/End: Original strand, 23526385 - 23526517
Alignment:
Q  34 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctcta 133  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  23526385 tctctacaataaatatgtaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattcttca 23526484  T
Q  134 aaatggacaagtattatgaaacggagggagtat 166  Q
    |||||||||||||||||||||||||||||||||    
T  23526485 aaatggacaagtattatgaaacggagggagtat 23526517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 32 - 159
Target Start/End: Complemental strand, 27211088 - 27210961
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||     
T  27211088 tctctctgcaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttaaatgtgacaagtattgtgaaacaaaattattctt 27210989  T
Q  132 taaaatggacaagtattatgaaacggag 159  Q
     ||||||||||| |||||||||||||||    
T  27210988 aaaaatggacaaatattatgaaacggag 27210961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 36 - 168
Target Start/End: Complemental strand, 24772035 - 24771903
Alignment:
Q  36 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaa 135  Q
    ||||||||||||||  |||| ||||||||| || |||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  24772035 tctacaataaatatttaaggctattattgaaaaaacaataattaatattgcattgaaacttgaaagagacatgtattgtgaaacaaaattattctctaaa 24771936  T
Q  136 atggacaagtattatgaaacggagggagtatta 168  Q
    |||||||||||||||||||||||||||||||||    
T  24771935 atggacaagtattatgaaacggagggagtatta 24771903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 36 - 168
Target Start/End: Original strand, 33082892 - 33083024
Alignment:
Q  36 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaa 135  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||| ||||    
T  33082892 tctacaataaatatttaagggtattattgagaagacaataattaatattgcattgaaatttgaaagagacatgtattgtgaaacaaaattattctttaaa 33082991  T
Q  136 atggacaagtattatgaaacggagggagtatta 168  Q
    |||||||||||||||||||||||||||||||||    
T  33082992 atggacaagtattatgaaacggagggagtatta 33083024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 5e-47
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 46771782 - 46771910
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||     
T  46771782 tctctctacaataaatatgtaagagtattattgacaagaaaataattaatgttacattgaaacttgaaagtgataagtattgtgaaacaaaattattctt 46771881  T
Q  132 taaaatggacaagtattatgaaacggagg 160  Q
     |||||| |||||||||||||||||||||    
T  46771882 caaaatgaacaagtattatgaaacggagg 46771910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 34 - 168
Target Start/End: Complemental strand, 40562416 - 40562283
Alignment:
Q  34 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctcta 133  Q
    ||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||  |    
T  40562416 tctctgcaataaatatgcaagg-tatcattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtaaaacaaaatcattcttca 40562318  T
Q  134 aaatggacaagtattatgaaacggagggagtatta 168  Q
    ||||||||||||||||| ||||||| | |||||||    
T  40562317 aaatggacaagtattataaaacggatgaagtatta 40562283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 40261418 - 40261320
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattct 130  Q
    ||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40261418 tctctctacaataaatatgtaagggtattattgacaaaccaataattaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaattattct 40261320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 32 - 166
Target Start/End: Complemental strand, 51064887 - 51064753
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||| | |||||||||||||| ||   ||||||||| |||||||||||||||||||||||||| ||  |||||||||||||||||||    
T  51064887 tctctctacaataaataggtaagggtattattgataaactaataattaacgttgcattgaaacttgaaagtgacaaataaagtgaaacaaaattattctc 51064788  T
Q  132 taaaatggacaagtattatgaaacggagggagtat 166  Q
    ||||||||||||||||| |||||| || |||||||    
T  51064787 taaaatggacaagtattgtgaaacagacggagtat 51064753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 31003920 - 31003787
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||| | ||||||||||| |||||  ||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  31003920 tctctctacaataaataggtaagggtattatggacaaaccaacaattaatgttgcattgaaacttgaaagtggcaagtaatgtgaaacaaaattattctc 31003821  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
     ||||  || ||||||| |||||| |||||||||    
T  31003820 caaaagcgataagtattgtgaaacagagggagta 31003787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 18396838 - 18396971
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||| | ||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||| |  ||| ||||||||||||||||    
T  18396838 tctctctacaataaataagtaagggaattattgaaaagtcaataattaatgttgcattgaaacttgaaagtgacaaattatgtaaaacaaaattattctc 18396937  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
     ||||   ||||||||| ||||| ||||||||||    
T  18396938 caaaagcaacaagtattgtgaaatggagggagta 18396971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 27143145 - 27143014
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||| |||||| | |||||||||||||||||  ||||||||||||||| |||||||||||  ||||||||||| ||||||||||||||||||||    
T  27143145 tctctctacagtaaataggtaagggtattattgacaaaccaataattaatgttgtattgaaacttg--agtgacaagtaatgtgaaacaaaattattctc 27143048  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
     ||||  ||||| ||||||||| |||| ||||||    
T  27143047 caaaagcgacaattattatgaagcggatggagta 27143014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 30 - 128
Target Start/End: Complemental strand, 40052599 - 40052501
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 128  Q
    |||||||||| |||||||| |||| | ||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40052599 tttctctctataataaataagcaacgatattattgacaaaccaataattaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaattatt 40052501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 4e-26
Query Start/End: Original strand, 33 - 158
Target Start/End: Complemental strand, 23166983 - 23166858
Alignment:
Q  33 ctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctct 132  Q
    ||||||| ||||||||   ||| |||||||||||||  ||||||||||||||| |||||||||||||||| | || || |||||||||||||||||||||    
T  23166983 ctctctaaaataaatagataagagtattattgacaaatcaataattaatgttgtattgaaacttgaaagtaataaataatgtgaaacaaaattattctct 23166884  T
Q  133 aaaatggacaagtattatgaaacgga 158  Q
    ||||  ||| |||||| |||||||||    
T  23166883 aaaagcgacgagtattgtgaaacgga 23166858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 4e-26
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 34458857 - 34458724
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||| ||| |||||| ||||||||||| |  ||  |||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||    
T  34458857 tctctctataatgaatatgtaagggtattatcggtaaaccaataattaatgttgcatcgaaacttgaaagtgacaagtaaagtgaaacaaaattattctc 34458758  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
     ||||  ||||  |||| ||||||||| ||||||    
T  34458757 caaaagcgacatatattgtgaaacggaaggagta 34458724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 14925610 - 14925734
Alignment:
Q  34 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctcta 133  Q
    ||||||||||||||| | ||| |||||||||||||  |||||  ||| |||||||||||||||||||  ||||||||  ||||||||||||||| |||||    
T  14925610 tctctacaataaataggtaagagtattattgacaaaccaata--taaggttgcattgaaacttgaaaacgacaagtaaagtgaaacaaaattatgctcta 14925707  T
Q  134 aaatggacaagtattatgaaacggagg 160  Q
    |||  |||||||||| |||||||||||    
T  14925708 aaaacgacaagtattgtgaaacggagg 14925734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 41 - 158
Target Start/End: Original strand, 24876714 - 24876831
Alignment:
Q  41 aataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatgga 140  Q
    |||||||| | ||| |||||||||||||  ||||||||||||| ||||||| ||||||||||||||||||   |||||||||||||||||| ||||  ||    
T  24876714 aataaataagtaagagtattattgacaaaccaataattaatgtcgcattgacacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaaacga 24876813  T
Q  141 caagtattatgaaacgga 158  Q
    |||||||| ||| |||||    
T  24876814 caagtattgtgagacgga 24876831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 34 - 158
Target Start/End: Complemental strand, 31061590 - 31061463
Alignment:
Q  34 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca---agtattgtgaaacaaaattattct 130  Q
    |||||||| ||||||||  |||||||||||| |||  |||||||||||||||||||||||||||| |||||||   |||| ||||||| ||||||||| |    
T  31061590 tctctacagtaaatatgtgagggtattattgtcaaaccaataattaatgttgcattgaaacttgagagtgacaagtagtaatgtgaaataaaattatttt 31061491  T
Q  131 ctaaaatggacaagtattatgaaacgga 158  Q
    | ||||  |||||||||| |||||||||    
T  31061490 ccaaaagtgacaagtattgtgaaacgga 31061463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 32 - 168
Target Start/End: Complemental strand, 1837961 - 1837824
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagta---ttgtgaaacaaaattatt 128  Q
    ||||| |||||||||||    ||||||||||||| ||  |||||||||||||||||||||||||| |||||||||||||   |  |||||||||||||||    
T  1837961 tctctttacaataaatagattagggtattattgataaatcaataattaatgttgcattgaaacttaaaagtgacaagtaaattattgaaacaaaattatt 1837862  T
Q  129 ctctaaaatggacaagtattatgaaacggagggagtatta 168  Q
    ||  ||||   ||| ||||||||||||||| |||||||||    
T  1837861 cttcaaaa--aacatgtattatgaaacggatggagtatta 1837824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 38 - 158
Target Start/End: Original strand, 25929248 - 25929368
Alignment:
Q  38 tacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaat 137  Q
    |||||||||||   |||||||||||||| ||  ||||| |||||||||| |||||||||||||| | |||||    ||||||||||||||||| |||||     
T  25929248 tacaataaatagataagggtattattgataaatcaatatttaatgttgcgttgaaacttgaaaggggcaagtgaaatgaaacaaaattattctttaaaag 25929347  T
Q  138 ggacaagtattatgaaacgga 158  Q
     |||||||||| |||||||||    
T  25929348 cgacaagtattgtgaaacgga 25929368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 1749457 - 1749515
Alignment:
Q  71 caataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    |||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  1749457 caataactaatgttgcattgaaacttaaaagtaacaagtattgtgaaacaaaattattc 1749515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 3657218 - 3657282
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaactt 96  Q
    ||||||||||||||||| | ||  |||||||||||||  ||||||||||||||||||||||||||    
T  3657218 tctctctacaataaataggtaaaagtattattgacaaaccaataattaatgttgcattgaaactt 3657282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 129
Target Start/End: Complemental strand, 14350565 - 14350510
Alignment:
Q  74 taattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||||||||||||||||||||| ||||||||||||| | | ||||||||||||||    
T  14350565 taattaatgttgcattgaaactttaaagtgacaagtaatataaaacaaaattattc 14350510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 41959788 - 41959853
Alignment:
Q  103 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtatta 168  Q
    |||| ||||| ||||||||||   |||||||||||||||| ||||| |||||||||||||||||||    
T  41959788 gacatgtattttgaaacaaaaaatttctctaaaatggacatgtattttgaaacggagggagtatta 41959853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 3943742 - 3943804
Alignment:
Q  103 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 165  Q
    |||| ||||| ||||||||||   |||||||||||||||| ||||| ||||||||||||||||    
T  3943742 gacatgtattttgaaacaaaaaatttctctaaaatggacatgtattttgaaacggagggagta 3943804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 9589615 - 9589673
Alignment:
Q  108 gtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 166  Q
    ||||| ||||||||||   ||||||||||| |||| ||||| |||||||||||||||||    
T  9589615 gtattttgaaacaaaaaatttctctaaaatagacatgtattttgaaacggagggagtat 9589673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 44227899 - 44227845
Alignment:
Q  114 tgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtatta 168  Q
    ||||||||||   ||||| |||||||||| ||||| |||||||||||||||||||    
T  44227899 tgaaacaaaaaatttctccaaaatggacatgtattttgaaacggagggagtatta 44227845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 49756742 - 49756684
Alignment:
Q  34 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaa 92  Q
    ||||| |||||||||   |||||||| |||||||| |||||||||| ||||||||||||    
T  49756742 tctctgcaataaatacttaagggtataattgacaaaacaataattattgttgcattgaa 49756684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 165
Target Start/End: Original strand, 51064995 - 51065033
Alignment:
Q  127 ttctctaaaatggacaagtattatgaaacggagggagta 165  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  51064995 ttctttaaaatggacaagtattgtgaaacggagggagta 51065033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 4e-69; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 7147057 - 7147190
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7147057 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 7147156  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    ||||||||||||||||||||||||||||||||||    
T  7147157 taaaatggacaagtattatgaaacggagggagta 7147190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 40058436 - 40058303
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40058436 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 40058337  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    ||||||||||||||||||||||||||||||||||    
T  40058336 taaaatggacaagtattatgaaacggagggagta 40058303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 40918864 - 40918731
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40918864 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 40918765  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    ||||||||||||||||||||||||||||||||||    
T  40918764 taaaatggacaagtattatgaaacggagggagta 40918731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 133; E-Value: 2e-68
Query Start/End: Original strand, 32 - 168
Target Start/End: Complemental strand, 43275532 - 43275396
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43275532 tctctctacaataaatatgcaagggtattattgacaagataataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 43275433  T
Q  132 taaaatggacaagtattatgaaacggagggagtatta 168  Q
    |||||||||||||||||||||||||||||||||||||    
T  43275432 taaaatggacaagtattatgaaacggagggagtatta 43275396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 132; E-Value: 6e-68
Query Start/End: Original strand, 32 - 167
Target Start/End: Complemental strand, 30999657 - 30999522
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30999657 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtaacaagtattgtgaaacaaaattattctc 30999558  T
Q  132 taaaatggacaagtattatgaaacggagggagtatt 167  Q
    ||||||||||||||||||||||||||||||||||||    
T  30999557 taaaatggacaagtattatgaaacggagggagtatt 30999522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 129; E-Value: 4e-66
Query Start/End: Original strand, 32 - 168
Target Start/End: Complemental strand, 2540063 - 2539927
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2540063 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctt 2539964  T
Q  132 taaaatggacaagtattatgaaacggagggagtatta 168  Q
    ||||||||||||||||||||||||||| |||||||||    
T  2539963 taaaatggacaagtattatgaaacggaaggagtatta 2539927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 128; E-Value: 2e-65
Query Start/End: Original strand, 32 - 167
Target Start/End: Complemental strand, 11174356 - 11174221
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  11174356 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctt 11174257  T
Q  132 taaaatggacaagtattatgaaacggagggagtatt 167  Q
    ||||||| ||||||||||||||||||||||||||||    
T  11174256 taaaatgaacaagtattatgaaacggagggagtatt 11174221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 128; E-Value: 2e-65
Query Start/End: Original strand, 32 - 167
Target Start/End: Complemental strand, 11646458 - 11646323
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11646458 tctctctacaataaatatgcaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctc 11646359  T
Q  132 taaaatggacaagtattatgaaacggagggagtatt 167  Q
    ||||||||||||||||||||||||||||||||||||    
T  11646358 taaaatggacaagtattatgaaacggagggagtatt 11646323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 32 - 166
Target Start/End: Original strand, 36068224 - 36068358
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36068224 tctctctacaataaatatgcaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctc 36068323  T
Q  132 taaaatggacaagtattatgaaacggagggagtat 166  Q
    |||||||||||||||||||||||||||||||||||    
T  36068324 taaaatggacaagtattatgaaacggagggagtat 36068358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 37345715 - 37345848
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37345715 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaaatgacaagtattgtgaaacaaaattattctc 37345814  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    ||||||||||||||||||||||||||| ||||||    
T  37345815 taaaatggacaagtattatgaaacggaaggagta 37345848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 32 - 168
Target Start/End: Original strand, 3585595 - 3585731
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3585595 tctctctacaataaatatgcaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctc 3585694  T
Q  132 taaaatggacaagtattatgaaacggagggagtatta 168  Q
    |||||| |||||||||||||||||||| |||||||||    
T  3585695 taaaatagacaagtattatgaaacggatggagtatta 3585731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 32 - 166
Target Start/End: Original strand, 27035139 - 27035273
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27035139 tctctctacagtaaatatgtaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 27035238  T
Q  132 taaaatggacaagtattatgaaacggagggagtat 166  Q
     |||||| ||||||||||||||||||||| |||||    
T  27035239 caaaatgaacaagtattatgaaacggaggcagtat 27035273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 20546424 - 20546308
Alignment:
Q  34 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctcta 133  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |    
T  20546424 tctctacaataaatatgtaagggtattattgacaagacaataattaatgttgcattgaaacctgaaagtgacaagtattgtgaaacaaaattattcttca 20546325  T
Q  134 aaatggacaagtattat 150  Q
    |||||||||||||||||    
T  20546324 aaatggacaagtattat 20546308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 27564002 - 27563885
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||    
T  27564002 tttctctctacaataaataggtaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagtaatatgaaacaaaattgttc 27563903  T
Q  130 tctaaaatggacaagtat 147  Q
    || ||||  |||||||||    
T  27563902 tccaaaagcgacaagtat 27563885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 32 - 166
Target Start/End: Original strand, 35866757 - 35866891
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||| ||||| ||| |||||||||| ||  ||||||||||||||| ||||||||||||||||||||||||   ||||||||||||||||||    
T  35866757 tctctctacaatagatatgtaagagtattattgataaaccaataattaatgttgaattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctc 35866856  T
Q  132 taaaatggacaagtattatgaaacggagggagtat 166  Q
     ||||| |||||||||| ||||||||| |||||||    
T  35866857 caaaatagacaagtattgtgaaacggatggagtat 35866891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 28568062 - 28568195
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||| |||||||||| | ||||||| |||||| ||  |||||||||||||||||||||||||| |||||||||||||   ||||||||||| ||||||    
T  28568062 tctctcaacaataaataggtaagggtaatattgataaaccaataattaatgttgcattgaaacttcaaagtgacaagtaaaatgaaacaaaataattctc 28568161  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
     |||||||||||||||| ||||| ||||||||||    
T  28568162 caaaatggacaagtattgtgaaatggagggagta 28568195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 28575655 - 28575788
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||| |||||||||| | ||||||| |||||| ||  |||||||||||||||||||||||||| |||||||||||||   ||||||||||| ||||||    
T  28575655 tctctcaacaataaataggtaagggtaatattgataaaccaataattaatgttgcattgaaacttcaaagtgacaagtaaaatgaaacaaaataattctc 28575754  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
     |||||||||||||||| ||||| ||||||||||    
T  28575755 caaaatggacaagtattgtgaaatggagggagta 28575788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 32 - 159
Target Start/End: Complemental strand, 26628949 - 26628822
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||| | |||||||||||||| ||  |||||||||||||||||||||||||||||| |||||| ||  |||||||||||||||||||    
T  26628949 tctctctacaataaataggtaagggtattattgataaatcaataattaatgttgcattgaaacttgaaaatgacaaataaagtgaaacaaaattattctc 26628850  T
Q  132 taaaatggacaagtattatgaaacggag 159  Q
     ||||   ||| ||||| ||||||||||    
T  26628849 caaaagcaacatgtattgtgaaacggag 26628822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 28562565 - 28562702
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||| | |||||||| | ||| ||| |||||| ||  ||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||     
T  28562565 tctctcaaaaataaataggtaagagtaatattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaataattctt 28562664  T
Q  132 taaaatggacaagtattatgaaacggagggagtattac 169  Q
     |||||||| ||||||| ||| ||||||||||||||||    
T  28562665 caaaatggataagtattgtgagacggagggagtattac 28562702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 4e-26
Query Start/End: Original strand, 33 - 170
Target Start/End: Complemental strand, 45400902 - 45400765
Alignment:
Q  33 ctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctct 132  Q
    |||||||||||||||| | |||  ||||||||| ||   |||||||||||||||||||||| || |||||||||| ||  |||||||||||||||||||     
T  45400902 ctctctacaataaataagtaagaatattattgataaattaataattaatgttgcattgaaatttaaaagtgacaaataaagtgaaacaaaattattctcc 45400803  T
Q  133 aaaatggacaagtattatgaaacggagggagtattaca 170  Q
    ||||  |||  |||||||||||||||||||||| ||||    
T  45400802 aaaaacgacttgtattatgaaacggagggagtaataca 45400765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 13881088 - 13880991
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||||||||||||||  | |||  ||||||| ||||  ||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||    
T  13881088 tctctctacaataaattagtaagattattattaacaaatcaataattaatattgcattgaaacttgaaagtgacaagtaatttgaaacaaaattattc 13880991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 52 - 136
Target Start/End: Complemental strand, 10180981 - 10180897
Alignment:
Q  52 aagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaa 136  Q
    |||||||||||||||||    |||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  10180981 aagggtattattgacaaattcataactaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaattgttctccaaaa 10180897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 1052 - 1138
Target Start/End: Complemental strand, 37319325 - 37319239
Alignment:
Q  1052 aaatccctatgaacaagcaatatccattattgggaaaaccttggctccatttgccgaggataacttgattccttgttttggatttgg 1138  Q
    |||||| ||||||||||||||  | |||||||||||||| ||  || ||||||  |||||||| |||||||||||||||||||||||    
T  37319325 aaatccttatgaacaagcaattgcaattattgggaaaacattaactgcatttgatgaggataatttgattccttgttttggatttgg 37319239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 148
Target Start/End: Complemental strand, 30906817 - 30906706
Alignment:
Q  37 ctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaa 136  Q
    |||||| ||||| | |||| ||||||| ||||  ||||||||||| ||||||| ||| || ||||| ||||||| ||| ||| |||||||||||  ||||    
T  30906817 ctacaacaaataagtaaggatattattaacaattcaataattaatattgcattaaaatttaaaagtaacaagtaatgtaaaataaaattattcttcaaaa 30906718  T
Q  137 tggacaagtatt 148  Q
      ||||||||||    
T  30906717 acgacaagtatt 30906706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 39151544 - 39151667
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||||| ||||||||||| | ||| |||| |||||||||  |||||||||||||||       ||||||| ||||||||| ||| ||||||||| ||||    
T  39151544 tttctctttacaataaataggtaagagtatcattgacaagctaataattaatgttgc-------cttgaaaatgacaagtaatgtaaaacaaaatcattc 39151636  T
Q  130 tctaaaatggacaagtattatgaaacggagg 160  Q
    |  ||||  || ||||||  |||||||||||    
T  39151637 ttcaaaagtgataagtatcgtgaaacggagg 39151667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 41305824 - 41305760
Alignment:
Q  103 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtatt 167  Q
    |||| ||||| ||||||||||   |||||||||||||||| ||||| |||||||||| |||||||    
T  41305824 gacatgtattttgaaacaaaaaatttctctaaaatggacatgtattttgaaacggagagagtatt 41305760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 37510457 - 37510519
Alignment:
Q  75 aattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaat 137  Q
    ||||||| || ||||||||||| ||||||| |||||   ||||||||||||||||| ||||||    
T  37510457 aattaattttacattgaaacttaaaagtgataagtaaaatgaaacaaaattattctttaaaat 37510519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 28326791 - 28326734
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcatt 89  Q
    |||||| |||||||| |||||||  ||||||||||||  ||||||||| |||||||||    
T  28326791 tctctccacaataaacatgcaagattattattgacaaaccaataattagtgttgcatt 28326734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 4e-69; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 40886743 - 40886610
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40886743 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 40886644  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    ||||||||||||||||||||||||||||||||||    
T  40886643 taaaatggacaagtattatgaaacggagggagta 40886610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 6e-68
Query Start/End: Original strand, 32 - 167
Target Start/End: Complemental strand, 12806986 - 12806851
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12806986 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagagacaagtattgtgaaacaaaattattctc 12806887  T
Q  132 taaaatggacaagtattatgaaacggagggagtatt 167  Q
    ||||||||||||||||||||||||||||||||||||    
T  12806886 taaaatggacaagtattatgaaacggagggagtatt 12806851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 32 - 166
Target Start/End: Complemental strand, 30720625 - 30720491
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30720625 tctctctacaataaatatgcaagggtattattgacaagacaataactaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 30720526  T
Q  132 taaaatggacaagtattatgaaacggagggagtat 166  Q
    |||||||||||||||||||||||||||||||||||    
T  30720525 taaaatggacaagtattatgaaacggagggagtat 30720491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 130; E-Value: 1e-66
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 36561232 - 36561099
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36561232 tctctctacaataaatatgcaagggtattattgacaagacaatacttaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 36561133  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    ||||||||||||||||||||||||||||||||||    
T  36561132 taaaatggacaagtattatgaaacggagggagta 36561099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 34 - 166
Target Start/End: Original strand, 25773795 - 25773927
Alignment:
Q  34 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctcta 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  25773795 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgataagtattgtgaaacaaacttattctcta 25773894  T
Q  134 aaatggacaagtattatgaaacggagggagtat 166  Q
    |||||||||||||||||||||||||| ||||||    
T  25773895 aaatggacaagtattatgaaacggagagagtat 25773927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 32 - 166
Target Start/End: Complemental strand, 10285190 - 10285057
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  10285190 tctctctacaataaatatgcaagg-tattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctt 10285092  T
Q  132 taaaatggacaagtattatgaaacggagggagtat 166  Q
    |||||| ||||||||||||||||||||||||||||    
T  10285091 taaaatagacaagtattatgaaacggagggagtat 10285057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 25683362 - 25683229
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  25683362 tctctctacaataaatatgtaagggtattattgacaaaacaataattaatgttgcattgaaacttgaaagtgacaagttttatgaaacaaaattattctc 25683263  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
     |||||||||||||||||||||||||||||||||    
T  25683262 caaaatggacaagtattatgaaacggagggagta 25683229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 23097859 - 23097723
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||    
T  23097859 tttctctctacaataaatatgtaagggtattattgacaagacaataattaatattgcattgaaacatgaaagtaacaagtattgtgaaacaaaattattc 23097760  T
Q  130 tctaaaatggacaagtattatgaaacggagggagtat 166  Q
    || |||||||||||||||||||||||||| |||||||    
T  23097759 tccaaaatggacaagtattatgaaacggaaggagtat 23097723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 33 - 167
Target Start/End: Complemental strand, 37900755 - 37900621
Alignment:
Q  33 ctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctct 132  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||      
T  37900755 ctctctgcaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtatcgtgaaacaaaattattcttc 37900656  T
Q  133 aaaatggacaagtattatgaaacggagggagtatt 167  Q
    ||||| |||||||||||||||||||| ||||||||    
T  37900655 aaaatagacaagtattatgaaacggaaggagtatt 37900621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 30 - 163
Target Start/End: Original strand, 16983399 - 16983532
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16983399 tttctctctgcaatagatatgcaagggtattattgaaaagacaataattaatgttgcattgaaacttaaaagtgacaagtattgtgaaacaaaattattc 16983498  T
Q  130 tctaaaatggacaagtattatgaaacggagggag 163  Q
    |  ||||| |||||||||||| |||| |||||||    
T  16983499 ttcaaaatagacaagtattataaaacagagggag 16983532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 7e-37
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 734474 - 734339
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    |||||||||| |||| ||| | ||| |||||||||| ||  ||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  734474 tttctctctataatatataggtaagagtattattgataaaccaataattaatgttgtattgaaacttgaaagtgacaagtaaagtgaaacaaaattattc 734375  T
Q  130 tctaaaatggacaagtattatgaaacggagggagta 165  Q
    || |||||||||||||||| |||||||| |||||||    
T  734374 tccaaaatggacaagtattgtgaaacggtgggagta 734339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 30 - 168
Target Start/End: Original strand, 11319698 - 11319836
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||||||||||||||||| | ||| |||||||| | ||  ||||||||||| ||||||| |||| ||||||||| || ||  |||||||||||||||||    
T  11319698 tttctctctacaataaataggtaagagtattattaataaaccaataattaatattgcattaaaacctgaaagtgataaataaagtgaaacaaaattattc 11319797  T
Q  130 tctaaaatggacaagtattatgaaacggagggagtatta 168  Q
    |||||||| |||||||||||||||||||| | |||||||    
T  11319798 tctaaaatagacaagtattatgaaacggatgaagtatta 11319836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 32 - 159
Target Start/End: Original strand, 39071026 - 39071153
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||| | ||| | |||||||| ||  ||||||||||||||||||||| |||| |||||||||||||  |||||||||||||||||||    
T  39071026 tctctctacaataaataggtaagtggattattgataaaccaataattaatgttgcattgatacttaaaagtgacaagtaaagtgaaacaaaattattctc 39071125  T
Q  132 taaaatggacaagtattatgaaacggag 159  Q
     ||||| |||||||||| |||| |||||    
T  39071126 aaaaatagacaagtattgtgaatcggag 39071153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 1056758 - 1056624
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    |||||||||||||||||||   ||| |||||||||||||   |||||||||||||||||||||||||||||||||  |||| | ||||| ||||||||||    
T  1056758 tttctctctacaataaataaataagagtattattgacaaactaataattaatgttgcattgaaacttgaaagtga-tagtaat-tgaaataaaattattc 1056661  T
Q  130 tctaaaatggacaagtattatgaaacggagggagtat 166  Q
    || ||||  |||||||||| |||||||||||||||||    
T  1056660 tccaaaagtgacaagtattgtgaaacggagggagtat 1056624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 32 - 154
Target Start/End: Original strand, 16054255 - 16054377
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||   |||||||||||||||||   ||||||||||||||||||||||||||||||||||||  |  ||||| |||||||||||||    
T  16054255 tctctctacaataaatagataagggtattattgacaaactaataattaatgttgcattgaaacttgaaagtgacaaccaaagtgaaccaaaattattctc 16054354  T
Q  132 taaaatggacaagtattatgaaa 154  Q
     ||||  |||| ||||| |||||    
T  16054355 caaaagcgacatgtattttgaaa 16054377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 55 - 165
Target Start/End: Original strand, 26168075 - 26168185
Alignment:
Q  55 ggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaa 154  Q
    ||||||||| ||||   ||| |||||| ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||  |||| ||||  |||||    
T  26168075 ggtattattaacaaacaaatcattaatcttgcattgaaacttgaaagtgacaattaaagtgaaacaaaattattctctaaaaacgacatgtatcgtgaaa 26168174  T
Q  155 cggagggagta 165  Q
    |||| ||||||    
T  26168175 cggaaggagta 26168185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 30403075 - 30402981
Alignment:
Q  52 aagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagta 146  Q
    |||||||||||||||||  ||||||||||| ||| |||||||||| |||||||||||||   ||||| |||||||||||||||||  ||||||||    
T  30403075 aagggtattattgacaaaccaataattaattttgtattgaaacttaaaagtgacaagtaaaatgaaataaaattattctctaaaagcgacaagta 30402981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 11795392 - 11795314
Alignment:
Q  56 gtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaa 134  Q
    |||||||||| ||  | |||||||||||||||||||||||||||||||| || ||  ||||||||||||||||||||||    
T  11795392 gtattattgataaacctataattaatgttgcattgaaacttgaaagtgataaataaagtgaaacaaaattattctctaa 11795314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 7277552 - 7277486
Alignment:
Q  36 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagt 102  Q
    ||||||||||||| | ||||| |||||||||||||||||||||||| ||||||||||| || |||||    
T  7277552 tctacaataaataagtaagggcattattgacaagacaataattaattttgcattgaaatttaaaagt 7277486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 11797694 - 11797768
Alignment:
Q  36 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagta 110  Q
    ||||||||||||| |||||||||| ||||||||   |||||||||||||| ||||||| |||||| |||||||||    
T  11797694 tctacaataaataagcaagggtatcattgacaaactaataattaatgttgtattgaaatttgaaaatgacaagta 11797768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 12305687 - 12305728
Alignment:
Q  51 caagggtattattgacaagacaataattaatgttgcattgaa 92  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  12305687 caagggtattattgacaaaacaataatcaatgttgcattgaa 12305728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 15304884 - 15304821
Alignment:
Q  103 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 166  Q
    |||| ||||| ||||||||||   |||||||||||||||| ||||| | |||||||||||||||    
T  15304884 gacatgtattttgaaacaaaaaatttctctaaaatggacatgtattttaaaacggagggagtat 15304821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 21638911 - 21638990
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 109  Q
    |||||||| |||||| ||| | ||| | |||||||||||  ||||| ||||||||||||| |||||| || |||||||||    
T  21638911 tttctctccacaatatataggtaagagaattattgacaaaccaatatttaatgttgcatttaaacttaaatgtgacaagt 21638990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 25786002 - 25785928
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 106  Q
    |||||||||||||||||  |||||||| || || ||| |||| | ||||||||| ||||||  ||||||||||||    
T  25786002 tctctctacaataaataatcaagggtaataatgccaaaacaacatttaatgttgtattgaactttgaaagtgaca 25785928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 4e-69; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 46694243 - 46694110
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46694243 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 46694144  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    ||||||||||||||||||||||||||||||||||    
T  46694143 taaaatggacaagtattatgaaacggagggagta 46694110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 32 - 166
Target Start/End: Original strand, 36881424 - 36881558
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36881424 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctc 36881523  T
Q  132 taaaatggacaagtattatgaaacggagggagtat 166  Q
    |||||||||||||||||||||||||||||||||||    
T  36881524 taaaatggacaagtattatgaaacggagggagtat 36881558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 130; E-Value: 1e-66
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 13364987 - 13365120
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13364987 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctc 13365086  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    ||||||||||||||||||||||||||||||||||    
T  13365087 taaaatggacaagtattatgaaacggagggagta 13365120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 4e-66
Query Start/End: Original strand, 34 - 166
Target Start/End: Original strand, 29375278 - 29375410
Alignment:
Q  34 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctcta 133  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29375278 tctctacaataaatatgcaagggcattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctcta 29375377  T
Q  134 aaatggacaagtattatgaaacggagggagtat 166  Q
    |||||||||||||||||||||||||||||||||    
T  29375378 aaatggacaagtattatgaaacggagggagtat 29375410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 32 - 166
Target Start/End: Complemental strand, 23088064 - 23087930
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  23088064 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctt 23087965  T
Q  132 taaaatggacaagtattatgaaacggagggagtat 166  Q
    |||||| |||||||||||||||||||||| |||||    
T  23087964 taaaatcgacaagtattatgaaacggaggaagtat 23087930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 32 - 166
Target Start/End: Complemental strand, 19241801 - 19241667
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  19241801 tctctctacaataaacatgcaagggtattattgacaagtcaataattaatgttgcattgaaacttaaaagtgacaagtattttgaaacaaaattattctc 19241702  T
Q  132 taaaatggacaagtattatgaaacggagggagtat 166  Q
    |||||||||||||||||||||||||||||||||||    
T  19241701 taaaatggacaagtattatgaaacggagggagtat 19241667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 3383220 - 3383353
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3383220 tctctctacaataaatatgcaagagtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 3383319  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    ||||||||||||||||||| ||||| | ||||||    
T  3383320 taaaatggacaagtattataaaacgaaaggagta 3383353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 198999 - 199132
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||    
T  198999 tctctctacaataaatatgcaagggtattattgacaaaacaataattaatgttgcattgaaacttgaaaatgacaaatattgtgaaacaaaattattttc 199098  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    |||||||||||| |||||||||| ||||||||||    
T  199099 taaaatggacaactattatgaaatggagggagta 199132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 8e-52
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 13703354 - 13703490
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  13703354 tttctctctgcaataaatatgcaagggtattattgacaacacaataattaatgttgcattgaaacttgaaagtgacaagtattgtaaaacaaatttattc 13703453  T
Q  130 tctaaaatggacaagtattatgaaacggagggagtat 166  Q
    |  | |||||||||||||||||||||||| |||||||    
T  13703454 ttcagaatggacaagtattatgaaacggatggagtat 13703490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 56 - 167
Target Start/End: Original strand, 48820508 - 48820619
Alignment:
Q  56 gtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaac 155  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  48820508 gtattattgacaaaacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattttttaaaatggacaagtattatgaaac 48820607  T
Q  156 ggagggagtatt 167  Q
    ||||| ||||||    
T  48820608 ggaggaagtatt 48820619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 32 - 150
Target Start/End: Original strand, 43750280 - 43750398
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||     
T  43750280 tctctcaacaataaatatgcaagagtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgagaaaccaaattattcta 43750379  T
Q  132 taaaatggacaagtattat 150  Q
     ||||||||||||||||||    
T  43750380 aaaaatggacaagtattat 43750398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 18356001 - 18355868
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||| | |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||     
T  18356001 tctctctacaataaataagtaagggtattattgataaatcaataattaatgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctt 18355902  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
     |||||||||||||||| ||||||||||||||||    
T  18355901 caaaatggacaagtattgtgaaacggagggagta 18355868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 32835122 - 32834989
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||| |||||  ||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||| | |||||| |||||||||||    
T  32835122 tctctctacaattaatatttaagggtattattgacaaaacaatacttaatgttgcattgaaacttgaaaatgacaagtactatgaaacgaaattattctc 32835023  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    || |||||||||||||||||||||||||||||||    
T  32835022 tacaatggacaagtattatgaaacggagggagta 32834989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 32 - 142
Target Start/End: Complemental strand, 31873995 - 31873886
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||| ||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  31873995 tctctctgcaataaatatataagggtatt-ttgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaataaaattattctc 31873897  T
Q  132 taaaatggaca 142  Q
    |||||||||||    
T  31873896 taaaatggaca 31873886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 48436366 - 48436503
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    |||||||||||||||||||   ||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  48436366 tttctctctacaataaataattaagtgtattattgacaagctaataattaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaattattc 48436465  T
Q  130 tctaaaatggacaagtattatgaaacggagggagtatt 167  Q
    || ||||  ||||| |||| |||||  || ||||||||    
T  48436466 tccaaaagtgacaaatattgtgaaatagatggagtatt 48436503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 32 - 159
Target Start/End: Original strand, 48963263 - 48963390
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||| ||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||| ||| ||| || |||| ||||| ||||||||||||    
T  48963263 tctctttacaataaatatataaggatattattgacaagacaataattaatgttgcattgaaacttaaaaatgataaatattatgaaataaaattattctc 48963362  T
Q  132 taaaatggacaagtattatgaaacggag 159  Q
    |||||| || ||||| |||||| |||||    
T  48963363 taaaatagataagtaatatgaatcggag 48963390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 30 - 154
Target Start/End: Original strand, 54086694 - 54086818
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    |||||||||| |||| ||| | |||||||||||||| ||  ||||||||||||||| ||||||||||||||||||||| ||   |||||||||| |||||    
T  54086694 tttctctctataatacataggtaagggtattattgataaatcaataattaatgttgtattgaaacttgaaagtgacaaataaaatgaaacaaaagtattc 54086793  T
Q  130 tctaaaatggacaagtattatgaaa 154  Q
    || |||||||||||||||| |||||    
T  54086794 tccaaaatggacaagtattgtgaaa 54086818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 52 - 159
Target Start/End: Original strand, 6901725 - 6901831
Alignment:
Q  52 aagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatg 151  Q
    |||| ||||||||| ||  |||| ||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| ||||||||||| |||| ||    
T  6901725 aaggatattattgataaatcaatgattaatgttgcattgaaacttaaaagtgacaagtaaagtgaaacaaaattattctccaaaatggacaa-tattgtg 6901823  T
Q  152 aaacggag 159  Q
    ||||||||    
T  6901824 aaacggag 6901831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 80 - 166
Target Start/End: Original strand, 26783661 - 26783747
Alignment:
Q  80 atgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 166  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||| |||||| |||||||||| | ||||||||| |||||    
T  26783661 atgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctttaaaatagacaagtattgtaaaacggaggaagtat 26783747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 52009183 - 52009105
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagta 110  Q
    ||||||||||||||||| | || | |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  52009183 tctctctacaataaataggtaatgttattattgacaagacaataattaatgttgcatcgaaacttgaaagtgacaagta 52009105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 37 - 155
Target Start/End: Complemental strand, 27707116 - 27706999
Alignment:
Q  37 ctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaa 136  Q
    |||||||||||||| | |||||||||||||||||||||| |||||||| |||| ||| |||||||||| || |||||||||| ||||||||| |  | ||    
T  27707116 ctacaataaatatgta-gggtattattgacaagacaatagttaatgttacattaaaatttgaaagtgataaatattgtgaaataaaattatttttcagaa 27707018  T
Q  137 tggacaagtattatgaaac 155  Q
    |||| || |||||||||||    
T  27707017 tggataaatattatgaaac 27706999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 32 - 156
Target Start/End: Original strand, 24064367 - 24064488
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||| | ||   ||||||||| ||  |||||||||||||| |||| |||||||||||||||| |||  |||||| ||||||||||||    
T  24064367 tctctctacaataaataggtaa---tattattgataaaccaataattaatgttacattaaaacttgaaagtgacatgtaaagtgaaataaaattattctc 24064463  T
Q  132 taaaatggacaagtattatgaaacg 156  Q
     ||||  |||| ||||| |||||||    
T  24064464 caaaaacgacatgtattgtgaaacg 24064488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 128
Target Start/End: Complemental strand, 53559742 - 53559648
Alignment:
Q  34 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattatt 128  Q
    ||||||||||||||| | ||  |||||||| | ||  |||| ||||||||||||||||||||||| |||||||||||   |||||||||||||||    
T  53559742 tctctacaataaataagtaacagtattattaataaatcaatgattaatgttgcattgaaacttgagagtgacaagtaaattgaaacaaaattatt 53559648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 1455257 - 1455186
Alignment:
Q  59 ttattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattct 130  Q
    ||||||||||  ||||||||||||||||||||||| | ||||||||||||||  || ||||||| |||||||    
T  1455257 ttattgacaaaccaataattaatgttgcattgaaattggaaagtgacaagtaaagtaaaacaaatttattct 1455186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 37293555 - 37293644
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaat 124  Q
    ||||||||||||||||| | ||||||| |||||| ||   |  ||||||||||||||||||||||||||| ||||||||   |||||||||||    
T  37293555 tctctctacaataaataggtaagggtaatattgataa---atcaattaatgttgcattgaaacttgaaagggacaagtaaaatgaaacaaaat 37293644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 37781082 - 37781152
Alignment:
Q  34 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtga 104  Q
    ||||||||||||||||  |||||||||||||||||  ||||||||||  ||| ||||||| ||||||||||    
T  37781082 tctctacaataaatatttaagggtattattgacaaaccaataattaactttggattgaaatttgaaagtga 37781152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 52805155 - 52805082
Alignment:
Q  37 ctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagta 110  Q
    ||||||| |||| | |||||| ||||||| ||  ||||||| |||||||||| |||||||||||||||||||||    
T  52805155 ctacaattaataagtaagggtgttattgataaatcaataataaatgttgcatcgaaacttgaaagtgacaagta 52805082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 19912153 - 19912217
Alignment:
Q  103 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtatt 167  Q
    |||| ||||| ||||||||||   |||||||||||||||| ||||| ||||||||||||||||||    
T  19912153 gacatgtattttgaaacaaaaaatttctctaaaatggacatgtattttgaaacggagggagtatt 19912217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 38806320 - 38806384
Alignment:
Q  103 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtatt 167  Q
    |||| ||||| ||||||||||   |||||||||||||||| ||||| ||||||||||||||||||    
T  38806320 gacatgtattttgaaacaaaaaatttctctaaaatggacatgtattttgaaacggagggagtatt 38806384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 40228339 - 40228280
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcatt 89  Q
    ||||||||||||||||||| | ||| || ||||| ||||| |||||||||||||||||||    
T  40228339 tttctctctacaataaataagtaagagttttattaacaagccaataattaatgttgcatt 40228280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 46188910 - 46188967
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcatt 89  Q
    ||||||||||||||||| |||||  ||||||||||||  |||||||||||||| ||||    
T  46188910 tctctctacaataaataagcaagaatattattgacaaaccaataattaatgttacatt 46188967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 43159891 - 43159967
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 106  Q
    ||||||||| ||||||||||  ||||||| |||||| ||  ||| | ||||||||||||||||  ||||||||||||    
T  43159891 tttctctctgcaataaatatttaagggtaatattgataaatcaacatttaatgttgcattgaattttgaaagtgaca 43159967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 168
Target Start/End: Complemental strand, 37293469 - 37293434
Alignment:
Q  133 aaaatggacaagtattatgaaacggagggagtatta 168  Q
    |||||||||||||||| |||||||||||||||||||    
T  37293469 aaaatggacaagtattgtgaaacggagggagtatta 37293434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 12095402 - 12095464
Alignment:
Q  103 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 165  Q
    |||| ||||| ||||||||||   ||||||||||||||||  |||| ||||||||||||||||    
T  12095402 gacatgtattttgaaacaaaaaatttctctaaaatggacatatattttgaaacggagggagta 12095464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 23771400 - 23771326
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 106  Q
    |||||||||||||||||  |||||||| ||  |  || |||||| ||||||||||||||||  ||||||||||||    
T  23771400 tctctctacaataaataatcaagggtaataaaggtaaaacaatatttaatgttgcattgaactttgaaagtgaca 23771326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 32980753 - 32980679
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 106  Q
    |||||||||||||||||   ||||||| |||||| || ||| || ||||||||| ||||||  ||||||||||||    
T  32980753 tctctctacaataaataactaagggtaatattgataaaacattatttaatgttgtattgaattttgaaagtgaca 32980679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 44276837 - 44276775
Alignment:
Q  103 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 165  Q
    |||| ||||| ||||||||||   |||||||||||||||| ||||| |||||||||| |||||    
T  44276837 gacatgtattttgaaacaaaaaatttctctaaaatggacatgtattttgaaacggagagagta 44276775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 2e-68; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 2e-68
Query Start/End: Original strand, 32 - 168
Target Start/End: Original strand, 8626626 - 8626762
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8626626 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctc 8626725  T
Q  132 taaaatggacaagtattatgaaacggagggagtatta 168  Q
    |||||||||||||||||||||||||||||||||||||    
T  8626726 taaaatggacaagtattatgaaacggagggagtatta 8626762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 32 - 166
Target Start/End: Original strand, 13757351 - 13757485
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13757351 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 13757450  T
Q  132 taaaatggacaagtattatgaaacggagggagtat 166  Q
    ||||||||||||||||||||||||||| |||||||    
T  13757451 taaaatggacaagtattatgaaacggatggagtat 13757485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 2e-65
Query Start/End: Original strand, 32 - 167
Target Start/End: Original strand, 1605722 - 1605857
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  1605722 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgtattgaaatttgaaagtgacaagtattgtgaaacaaaattattctc 1605821  T
Q  132 taaaatggacaagtattatgaaacggagggagtatt 167  Q
    ||||||||||||||||||||||||||||||||||||    
T  1605822 taaaatggacaagtattatgaaacggagggagtatt 1605857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 4e-63
Query Start/End: Original strand, 32 - 167
Target Start/End: Complemental strand, 15064828 - 15064693
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  15064828 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgtattgaaacttgaaagtgacaagtattatgaaacaaaattattctc 15064729  T
Q  132 taaaatggacaagtattatgaaacggagggagtatt 167  Q
     |||||||||||||||||||||||||||||||||||    
T  15064728 caaaatggacaagtattatgaaacggagggagtatt 15064693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 122; E-Value: 6e-62
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 4129571 - 4129703
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  4129571 tctctctacaataaatatgcaagggtattattgacaagacaata-ttaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattttc 4129669  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    ||||||||||||||||||||||||||||||||||    
T  4129670 taaaatggacaagtattatgaaacggagggagta 4129703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 7761444 - 7761577
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7761444 tctctctacaataaatatgcaagggtattattgacaaaataataattaatattgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattctc 7761543  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    ||||||||||||||||||||||||||||||||||    
T  7761544 taaaatggacaagtattatgaaacggagggagta 7761577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 29260336 - 29260469
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  29260336 tctctctacaataaatatgtaagggtattattgacaagacagtaattaatgttgcattgaaacttgaaaatgacaagtattttgaaacaaaattattctc 29260435  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    ||||||||||||||||||||||||||||||||||    
T  29260436 taaaatggacaagtattatgaaacggagggagta 29260469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 117; E-Value: 6e-59
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 17942585 - 17942721
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  17942585 tttctctctacaataaatatgtaagggtattattgacaaaacaataattaatgttgcattgaaacttgaaagtgacaagtattataaaacaaaattattc 17942684  T
Q  130 tctaaaatggacaagtattatgaaacggagggagtat 166  Q
    || ||||||||||||||||||||||||||||||||||    
T  17942685 tccaaaatggacaagtattatgaaacggagggagtat 17942721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 31559871 - 31559738
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||    
T  31559871 tctctctacaataaatatgcaagggtattattaacaagacaataattaatgttgcattgaaacttgaaagtaacaagtattgtaaaataaaattattctc 31559772  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    ||||||||| ||||||||||||||||||||||||    
T  31559771 taaaatggagaagtattatgaaacggagggagta 31559738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 32 - 158
Target Start/End: Original strand, 8235769 - 8235895
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8235769 tctctctacaataaatatgtaagggtattattgataagacaataattaatattgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 8235868  T
Q  132 taaaatggacaagtattatgaaacgga 158  Q
    |||||| ||||||||||||||||||||    
T  8235869 taaaatagacaagtattatgaaacgga 8235895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 30734616 - 30734483
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||| |||||| |||||| ||||||||||||| ||    
T  30734616 tctctctacaataaatatgcaagggtattattgataagataataattaatgttgcattgaaatttgaaaatgacaactattgtaaaacaaaattattttc 30734517  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
     |||||||||||||||||||||| ||||| ||||    
T  30734516 caaaatggacaagtattatgaaaaggaggaagta 30734483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 7e-37
Query Start/End: Original strand, 1144 - 1247
Target Start/End: Original strand, 7473246 - 7473349
Alignment:
Q  1144 catcaacacatgatcaagaagtcttcggtttgtatccggatgaaagactttgcaatggatttgaagaagttttgagtcggtatagggagattgttcctaa 1243  Q
    ||||||||||||||||||| |||||| |||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7473246 catcaacacatgatcaagatgtcttcagtttctatccagatgaaagaatttgcaatggatttgaagaagttttgagtcggtatagggaaattgttcctaa 7473345  T
Q  1244 tatt 1247  Q
    ||||    
T  7473346 tatt 7473349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 1052 - 1142
Target Start/End: Original strand, 7473060 - 7473150
Alignment:
Q  1052 aaatccctatgaacaagcaatatccattattgggaaaaccttggctccatttgccgaggataacttgattccttgttttggatttggggat 1142  Q
    |||||| |||||||||||||||||||| |||||||||||||||||  ||||||  |||||||||||||||||||| |||||||||||||||    
T  7473060 aaatccatatgaacaagcaatatccatcattgggaaaaccttggccgcatttgatgaggataacttgattccttgctttggatttggggat 7473150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 32 - 166
Target Start/End: Complemental strand, 20398371 - 20398237
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||| || |||||||| | |||||||||||||||||   |||||||||||||||||| ||||||||||||| ||||||  |||||||||||||||| ||    
T  20398371 tctctgtataataaataggtaagggtattattgacaatttaataattaatgttgcattaaaacttgaaagtggcaagtaaagtgaaacaaaattattttc 20398272  T
Q  132 taaaatggacaagtattatgaaacggagggagtat 166  Q
     ||||  |||| ||||| ||||||| |||||||||    
T  20398271 caaaagtgacatgtattgtgaaacgaagggagtat 20398237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 36 - 165
Target Start/End: Original strand, 3798247 - 3798376
Alignment:
Q  36 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaa 135  Q
    |||| |||||||| | |||||||||||||| ||    ||||||||||||||||| ||||||||||||||||||||  ||||||||||| |||| | ||||    
T  3798247 tctataataaataggtaagggtattattgataaactcataattaatgttgcattaaaacttgaaagtgacaagtaaagtgaaacaaaactattatttaaa 3798346  T
Q  136 atggacaagtattatgaaacggagggagta 165  Q
    |  ||||  ||||||||| | |||||||||    
T  3798347 aacgacatatattatgaagcagagggagta 3798376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 32 - 168
Target Start/End: Original strand, 26860908 - 26861044
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||  |||||||| | || ||||||||||||||  ||||||| ||||||| |||||||| ||||| |||||||||  |||||||||| ||||||||    
T  26860908 tctctctgtaataaataggtaaaggtattattgacaaatcaataatcaatgttgtattgaaacatgaaaatgacaagtaaagtgaaacaaacttattctc 26861007  T
Q  132 taaaatggacaagtattatgaaacggagggagtatta 168  Q
     ||||  |||| ||||| |||||| ||  ||||||||    
T  26861008 caaaaatgacatgtattgtgaaaccgattgagtatta 26861044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 166
Target Start/End: Original strand, 1814762 - 1814871
Alignment:
Q  57 tattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacg 156  Q
    ||||||||||||  ||||||| |||||||||||| || || |||||||||||||  |||||| |||||||||||  ||||  |||| ||||| |||||||    
T  1814762 tattattgacaaaccaataatcaatgttgcattggaaattaaaagtgacaagtaaagtgaaataaaattattcttcaaaagtgacatgtattgtgaaacg 1814861  T
Q  157 gagggagtat 166  Q
     ||| |||||    
T  1814862 aaggaagtat 1814871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 847900 - 847831
Alignment:
Q  41 aataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagta 110  Q
    |||||||||  ||| |||||||||||||  ||||||||||||||||||||||  |||||| |||||||||    
T  847900 aataaatatttaagagtattattgacaaagcaataattaatgttgcattgaactttgaaaatgacaagta 847831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 19996384 - 19996321
Alignment:
Q  103 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 166  Q
    |||| ||||| ||||||||||   |||||||||||||||| ||||| |||||||||||||||||    
T  19996384 gacatgtattttgaaacaaaaaatttctctaaaatggacatgtattttgaaacggagggagtat 19996321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 24120645 - 24120734
Alignment:
Q  73 ataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggaggga 162  Q
    ||||||| ||||||||| |||||  ||||||||||||| ||||||||| || | ||||| ||||  ||||||| || ||||| |||||||    
T  24120645 ataattagtgttgcattaaaactaaaaagtgacaagtaatgtgaaacacaaattttctccaaaaacgacaagttttttgaaatggaggga 24120734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 15064933 - 15064973
Alignment:
Q  127 ttctctaaaatggacaagtattatgaaacggagggagtatt 167  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  15064933 ttctctaaaatggacatgtattttgaaacggagggagtatt 15064973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 31244877 - 31244951
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 106  Q
    |||||| |||||||||||  |||  || |||||| || |||| ||||||||||||||||||  ||||||||||||    
T  31244877 tctctccacaataaatatctaagaataatattgataaaacaagaattaatgttgcattgaactttgaaagtgaca 31244951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 879350 - 879317
Alignment:
Q  59 ttattgacaagacaataattaatgttgcattgaa 92  Q
    |||||||||| |||||||||||||||||||||||    
T  879350 ttattgacaaaacaataattaatgttgcattgaa 879317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 122; Significance: 6e-62; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 122; E-Value: 6e-62
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 306 - 438
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  306 tctctctacaataaatatgcaagggtattattgacaagacaata-ttaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattttc 404  T
Q  132 taaaatggacaagtattatgaaacggagggagta 165  Q
    ||||||||||||||||||||||||||||||||||    
T  405 taaaatggacaagtattatgaaacggagggagta 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 95; Significance: 7e-46; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 45601 - 45735
Alignment:
Q  36 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaa 135  Q
    ||||||||||||||  |||| ||||||||| || |||||||||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  45601 tctacaataaatatttaaggttattattgataatacaataattaatattgcattgaaatttgaaagagacatgtattgtgaaacaaaattattctctaaa 45700  T
Q  136 atggacaagtattatgaaacggagggagtattaca 170  Q
    |||||||||||||||||||||||||||||| ||||    
T  45701 atggacaagtattatgaaacggagggagtaataca 45735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 90; Significance: 7e-43; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 32 - 145
Target Start/End: Complemental strand, 400 - 287
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||||||||||||| || | ||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||    
T  400 tctctctacaataaatatgtaatgatattattgacaagacaataattaatgttgcattaaaatttaaaagtgacaagtattgtgaaacaaaattattctc 301  T
Q  132 taaaatggacaagt 145  Q
    ||||||||||||||    
T  300 taaaatggacaagt 287  T

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Target: scaffold0168 (Bit Score: 68; Significance: 1e-29; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 32 - 167
Target Start/End: Original strand, 7812 - 7947
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||| ||||||||||| | ||| |||||||||||||  | ||||||||||||||||| |||||||||||||||||||| ||||||  |||||||||||     
T  7812 tctctttacaataaataggtaagagtattattgacaaaccgataattaatgttgcattaaaacttgaaagtgacaagtaatgtgaattaaaattattctt 7911  T
Q  132 taaaatggacaagtattatgaaacggagggagtatt 167  Q
    |||||  |||||||||| |||||| || ||||||||    
T  7912 taaaaacgacaagtattgtgaaacagatggagtatt 7947  T

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Target: scaffold0343 (Bit Score: 62; Significance: 4e-26; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 62; E-Value: 4e-26
Query Start/End: Original strand, 30 - 155
Target Start/End: Complemental strand, 7035 - 6911
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||||||||||||||||| | ||| |||||||||||| | |||||||||||||||||||||||||| |||  ||||| || | ||||||||||||||||    
T  7035 tttctctctacaataaataagtaagagtattattgacacgtcaataattaatgttgcattgaaactt-aaacggacaaataatatgaaacaaaattattc 6937  T
Q  130 tctaaaatggacaagtattatgaaac 155  Q
    || ||||  |||||||||| ||||||    
T  6936 tccaaaaacgacaagtattgtgaaac 6911  T

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Target: scaffold0056 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 71231 - 71350
Alignment:
Q  36 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaa 135  Q
    ||||||||||||| | |||||||| ||| ||||  ||||||||||| ||||||| |||||| ||||||||||||| ||||||| |||||||||||  |||    
T  71231 tctacaataaataggtaagggtataattaacaaaccaataattaattttgcattcaaacttaaaagtgacaagtaatgtgaaataaaattattcttcaaa 71330  T
Q  136 atggacaagtattatgaaac 155  Q
    |  |||||||||| ||||||    
T  71331 aacgacaagtattgtgaaac 71350  T

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Target: scaffold0025 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 52 - 131
Target Start/End: Complemental strand, 65278 - 65199
Alignment:
Q  52 aagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    |||||||||||||||||  ||||||||||| ||||||||||| || ||||||||||||| | ||||||||||||||||||    
T  65278 aagggtattattgacaaaccaataattaatattgcattgaaatttaaaagtgacaagtaatatgaaacaaaattattctc 65199  T

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Target: scaffold0076 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 15458 - 15322
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattc 129  Q
    ||||||||||||||||| | | ||| |||||||||||||  | |||||||||||||||||||||||| ||||| ||| |||  ||||||||| ||| |||    
T  15458 tttctctctacaataaaaaagtaagcgtattattgacaaaccgataattaatgttgcattgaaacttaaaagttacatgtaaagtgaaacaatattgttc 15359  T
Q  130 tctaaaatggacaagtattatgaaacggagggagtat 166  Q
     |||||||   ||| |||| |||||| ||| ||||||    
T  15358 actaaaattatcaaatattgtgaaacagagtgagtat 15322  T

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Target: scaffold0939 (Bit Score: 35; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0939
Description:

Target: scaffold0939; HSP #1
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 131
Target Start/End: Original strand, 1110 - 1184
Alignment:
Q  57 tattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctc 131  Q
    ||||||||| ||  |||||||||||||||||| ||||||| ||| |||||||||   | ||||||||||||||||    
T  1110 tattattgataaaccaataattaatgttgcatcgaaacttaaaaatgacaagtaaaataaaacaaaattattctc 1184  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 252707 - 252633
Alignment:
Q  32 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 106  Q
    |||||||||||||||||  |||||||| ||  ||||| |||||| ||||||||| ||||||  ||||||||||||    
T  252707 tctctctacaataaataatcaagggtaataaagacaaaacaatatttaatgttgtattgaactttgaaagtgaca 252633  T

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Target: scaffold0060 (Bit Score: 33; Significance: 0.000000007; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 10884 - 10964
Alignment:
Q  30 tttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagta 110  Q
    |||||||| |||||||||| | |||  ||||||||||||  ||||| ||||||||||||  |||||| || ||||||||||    
T  10884 tttctctccacaataaataggtaagaatattattgacaaatcaatatttaatgttgcatataaacttaaatgtgacaagta 10964  T

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Target: scaffold1431 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 63
Target Start/End: Complemental strand, 32 - 1
Alignment:
Q  32 tctctctacaataaatatgcaagggtattatt 63  Q
    ||||||||||||||||||||||||||||||||    
T  32 tctctctacaataaatatgcaagggtattatt 1  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 147263 - 147330
Alignment:
Q  39 acaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 106  Q
    |||||||||||  ||||||| |||||| || |||| | ||||||||||||||||  ||||||||||||    
T  147263 acaataaatatctaagggtaatattgataaaacaacatttaatgttgcattgaactttgaaagtgaca 147330  T

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Target: scaffold0257 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 23851 - 23913
Alignment:
Q  103 gacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 165  Q
    |||| ||||| ||||||||||   |||||||||||||||| ||||| ||||||||| ||||||    
T  23851 gacatgtattttgaaacaaaaaatttctctaaaatggacatgtattttgaaacggatggagta 23913  T

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