View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19726_low_17 (Length: 468)

Name: NF19726_low_17
Description: NF19726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19726_low_17
NF19726_low_17
[»] chr3 (102 HSPs)
chr3 (1-364)||(19253715-19254078)
chr3 (1-364)||(996041-996403)
chr3 (16-364)||(20498098-20498445)
chr3 (1-364)||(10139097-10139464)
chr3 (19-363)||(37820450-37820794)
chr3 (16-365)||(3206175-3206515)
chr3 (17-364)||(35337622-35337968)
chr3 (46-364)||(33807798-33808120)
chr3 (46-360)||(6589455-6589770)
chr3 (46-364)||(29448858-29449178)
chr3 (46-364)||(40246732-40247050)
chr3 (46-343)||(44762037-44762334)
chr3 (46-363)||(54625481-54625798)
chr3 (46-364)||(25418254-25418572)
chr3 (61-364)||(51699495-51699797)
chr3 (12-364)||(52114418-52114769)
chr3 (16-265)||(3999615-3999864)
chr3 (54-360)||(29029898-29030203)
chr3 (53-360)||(36674137-36674444)
chr3 (14-323)||(53929096-53929395)
chr3 (53-358)||(44906520-44906825)
chr3 (81-365)||(22057650-22057933)
chr3 (101-360)||(1440007-1440265)
chr3 (52-256)||(33996547-33996751)
chr3 (53-336)||(11431442-11431725)
chr3 (53-360)||(40897035-40897343)
chr3 (16-336)||(6035025-6035342)
chr3 (53-369)||(31646293-31646607)
chr3 (112-360)||(10660427-10660675)
chr3 (53-336)||(54628759-54629043)
chr3 (53-371)||(50903247-50903568)
chr3 (53-265)||(17946275-17946487)
chr3 (53-360)||(52617978-52618279)
chr3 (123-360)||(23753463-23753700)
chr3 (53-369)||(26107144-26107460)
chr3 (53-360)||(48379050-48379356)
chr3 (53-265)||(34484037-34484249)
chr3 (66-360)||(51737746-51738039)
chr3 (46-175)||(5825139-5825268)
chr3 (53-181)||(18749683-18749811)
chr3 (53-360)||(50762067-50762364)
chr3 (53-181)||(32580247-32580375)
chr3 (57-360)||(20832887-20833187)
chr3 (46-130)||(6131233-6131317)
chr3 (53-262)||(52810368-52810577)
chr3 (282-364)||(12734076-12734158)
chr3 (46-181)||(27899415-27899540)
chr3 (46-157)||(1439894-1440005)
chr3 (78-363)||(55235076-55235359)
chr3 (53-262)||(37454851-37455050)
chr3 (53-265)||(10728658-10728860)
chr3 (189-362)||(18749460-18749633)
chr3 (53-262)||(39038030-39038229)
chr3 (46-180)||(52079999-52080117)
chr3 (47-312)||(44276329-44276580)
chr3 (231-360)||(27240428-27240557)
chr3 (280-371)||(10728833-10728924)
chr3 (64-358)||(6975643-6975924)
chr3 (46-181)||(39842494-39842619)
chr3 (46-100)||(33807680-33807734)
chr3 (199-320)||(6131366-6131486)
chr3 (273-360)||(15493958-15494045)
chr3 (306-364)||(33996751-33996809)
chr3 (152-360)||(12103524-12103729)
chr3 (284-360)||(39842667-39842743)
chr3 (280-360)||(52810312-52810392)
chr3 (118-181)||(539476-539539)
chr3 (310-364)||(16010751-16010805)
chr3 (280-363)||(38772266-38772349)
chr3 (280-334)||(17946248-17946302)
chr3 (284-341)||(10105019-10105076)
chr3 (284-341)||(10216166-10216223)
chr3 (284-341)||(10225674-10225731)
chr3 (284-341)||(10225795-10225852)
chr3 (280-360)||(539615-539695)
chr3 (284-336)||(2024123-2024175)
chr3 (284-336)||(28146264-28146316)
chr3 (288-341)||(10104902-10104955)
chr3 (288-341)||(10216049-10216102)
chr3 (231-361)||(27899277-27899407)
chr3 (125-181)||(23535890-23535946)
chr3 (273-364)||(52079881-52079965)
chr3 (280-334)||(23536003-23536058)
chr3 (286-364)||(19552155-19552233)
chr3 (286-364)||(38629807-38629885)
chr3 (192-262)||(6131317-6131387)
chr3 (288-341)||(45215410-45215463)
chr3 (53-110)||(45862983-45863040)
chr3 (286-363)||(50900454-50900531)
chr3 (53-121)||(15492874-15492942)
chr3 (280-312)||(34484222-34484254)
chr3 (284-336)||(46749278-46749330)
chr3 (281-312)||(3999796-3999827)
chr3 (286-369)||(13662542-13662625)
chr3 (281-312)||(33996692-33996723)
chr3 (286-369)||(36055014-36055097)
chr3 (286-336)||(26555841-26555891)
chr3 (286-336)||(30588866-30588916)
chr3 (286-336)||(38682453-38682503)
chr3 (284-341)||(44701565-44701623)
chr3 (54-109)||(12103733-12103789)
chr3 (284-336)||(36785998-36786050)
[»] chr8 (57 HSPs)
chr8 (1-360)||(26374384-26374741)
chr8 (1-374)||(42735227-42735604)
chr8 (46-364)||(23115168-23115485)
chr8 (16-364)||(2704788-2705136)
chr8 (16-363)||(7506868-7507215)
chr8 (46-363)||(42938116-42938433)
chr8 (16-364)||(5576589-5576938)
chr8 (16-361)||(41478989-41479324)
chr8 (16-363)||(42937250-42937588)
chr8 (16-265)||(24501782-24502031)
chr8 (16-361)||(43959549-43959884)
chr8 (58-365)||(32711305-32711600)
chr8 (53-360)||(14782141-14782448)
chr8 (53-360)||(44725816-44726123)
chr8 (47-264)||(10392237-10392454)
chr8 (56-370)||(18958736-18959050)
chr8 (53-360)||(19717887-19718194)
chr8 (53-360)||(10295386-10295694)
chr8 (56-358)||(39467477-39467778)
chr8 (53-369)||(9288463-9288772)
chr8 (46-370)||(4402990-4403314)
chr8 (53-360)||(18305977-18306274)
chr8 (53-360)||(7466228-7466525)
chr8 (53-360)||(26855961-26856267)
chr8 (123-369)||(4031334-4031580)
chr8 (112-360)||(16362089-16362337)
chr8 (53-265)||(43166696-43166908)
chr8 (123-360)||(31623588-31623825)
chr8 (112-369)||(42305850-42306107)
chr8 (53-312)||(32497466-32497715)
chr8 (276-370)||(26373687-26373782)
chr8 (273-364)||(24214817-24214908)
chr8 (52-174)||(4950021-4950143)
chr8 (14-173)||(39189785-39189940)
chr8 (280-364)||(24502004-24502088)
chr8 (66-173)||(13478269-13478376)
chr8 (244-360)||(32497376-32497492)
chr8 (231-364)||(8543408-8543545)
chr8 (231-374)||(43166832-43166975)
chr8 (67-175)||(8410416-8410526)
chr8 (288-360)||(43308520-43308592)
chr8 (112-181)||(37857191-37857260)
chr8 (231-360)||(39189955-39190084)
chr8 (46-110)||(9770439-9770503)
chr8 (286-364)||(14061545-14061623)
chr8 (286-364)||(29260283-29260361)
chr8 (231-360)||(9771001-9771128)
chr8 (288-364)||(35142041-35142117)
chr8 (288-364)||(42366049-42366125)
chr8 (286-337)||(10802778-10802829)
chr8 (281-312)||(24501963-24501994)
chr8 (286-336)||(1606020-1606070)
chr8 (286-336)||(2112818-2112868)
chr8 (286-336)||(43605371-43605421)
chr8 (284-336)||(4302813-4302865)
chr8 (288-336)||(7148073-7148121)
chr8 (284-336)||(30382679-30382731)
[»] chr4 (97 HSPs)
chr4 (1-364)||(22201903-22202266)
chr4 (16-364)||(25331019-25331367)
chr4 (46-369)||(41881082-41881407)
chr4 (16-364)||(1044698-1045043)
chr4 (47-354)||(32950837-32951144)
chr4 (12-364)||(39479321-39479675)
chr4 (14-362)||(46635616-46635959)
chr4 (46-363)||(55302732-55303049)
chr4 (46-363)||(37046450-37046769)
chr4 (16-363)||(24130951-24131289)
chr4 (16-364)||(30009647-30009995)
chr4 (46-362)||(1112784-1113099)
chr4 (76-363)||(28541587-28541874)
chr4 (17-344)||(34228554-34228880)
chr4 (46-363)||(7007262-7007580)
chr4 (15-361)||(31314711-31315043)
chr4 (67-369)||(19740929-19741230)
chr4 (76-363)||(7249795-7250090)
chr4 (90-360)||(23464845-23465117)
chr4 (53-373)||(5441283-5441603)
chr4 (103-363)||(25504696-25504955)
chr4 (47-364)||(40537161-40537463)
chr4 (46-265)||(12112932-12113151)
chr4 (53-360)||(27767948-27768255)
chr4 (53-360)||(54341036-54341343)
chr4 (16-314)||(3436531-3436829)
chr4 (46-361)||(53275727-53276046)
chr4 (53-360)||(51320813-51321120)
chr4 (53-336)||(37828409-37828692)
chr4 (53-360)||(54853475-54853782)
chr4 (46-223)||(42786713-42786890)
chr4 (16-209)||(41320853-41321046)
chr4 (75-265)||(25446038-25446227)
chr4 (53-360)||(30967316-30967613)
chr4 (53-334)||(32322009-32322290)
chr4 (46-311)||(9163017-9163274)
chr4 (56-312)||(37915767-37916023)
chr4 (123-359)||(49834890-49835126)
chr4 (110-360)||(29649731-29649981)
chr4 (46-223)||(27454078-27454256)
chr4 (53-181)||(48261198-48261326)
chr4 (55-175)||(44770862-44770982)
chr4 (53-336)||(12913139-12913413)
chr4 (231-364)||(41320638-41320769)
chr4 (53-265)||(23987201-23987403)
chr4 (46-262)||(39307253-39307469)
chr4 (236-363)||(49469210-49469337)
chr4 (281-364)||(42786655-42786739)
chr4 (11-140)||(8711978-8712105)
chr4 (53-337)||(41725040-41725321)
chr4 (231-370)||(20021226-20021365)
chr4 (112-360)||(50018143-50018391)
chr4 (198-364)||(37915673-37915839)
chr4 (53-175)||(56445362-56445474)
chr4 (90-265)||(28370911-28371086)
chr4 (53-265)||(36479249-36479450)
chr4 (53-140)||(24736447-24736534)
chr4 (53-360)||(49501526-49501827)
chr4 (53-360)||(49507591-49507892)
chr4 (46-121)||(11090435-11090510)
chr4 (286-363)||(25445983-25446059)
chr4 (47-223)||(28483928-28484093)
chr4 (123-265)||(32684065-32684206)
chr4 (280-359)||(28370859-28370938)
chr4 (280-369)||(23987139-23987228)
chr4 (273-360)||(24736336-24736422)
chr4 (52-181)||(41581795-41581923)
chr4 (291-363)||(27454335-27454407)
chr4 (273-360)||(467775-467862)
chr4 (55-149)||(20021436-20021531)
chr4 (284-375)||(44646709-44646800)
chr4 (123-181)||(5800049-5800107)
chr4 (273-358)||(29855576-29855661)
chr4 (284-341)||(38230794-38230851)
chr4 (284-336)||(28483899-28483951)
chr4 (280-360)||(32684179-32684259)
chr4 (280-360)||(36479423-36479501)
chr4 (284-369)||(28100587-28100673)
chr4 (280-329)||(44771046-44771095)
chr4 (288-336)||(28847111-28847159)
chr4 (239-336)||(39307404-39307501)
chr4 (284-364)||(41761978-41762058)
chr4 (284-336)||(53271936-53271988)
chr4 (286-357)||(36728052-36728123)
chr4 (286-336)||(8584012-8584062)
chr4 (288-338)||(53594111-53594161)
chr4 (242-312)||(9163058-9163128)
chr4 (280-312)||(41320802-41320834)
chr4 (320-360)||(56445638-56445678)
chr4 (280-347)||(11090296-11090363)
chr4 (320-359)||(44775947-44775986)
chr4 (286-339)||(16653278-16653331)
chr4 (54-87)||(55047641-55047674)
chr4 (280-312)||(5799959-5799991)
chr4 (56-96)||(32684018-32684058)
chr4 (284-336)||(40143803-40143855)
chr4 (284-336)||(54509741-54509793)
[»] chr2 (51 HSPs)
chr2 (1-369)||(24776240-24776611)
chr2 (12-364)||(16269581-16269933)
chr2 (16-364)||(31170596-31170944)
chr2 (14-362)||(14198547-14198894)
chr2 (1-364)||(35316952-35317319)
chr2 (16-364)||(12407270-12407618)
chr2 (1-362)||(44765667-44766017)
chr2 (16-363)||(22551735-22552082)
chr2 (18-364)||(305439-305787)
chr2 (16-365)||(43847535-43847884)
chr2 (66-364)||(1789332-1789630)
chr2 (16-312)||(20605178-20605474)
chr2 (46-359)||(5093049-5093352)
chr2 (52-352)||(32125152-32125455)
chr2 (53-360)||(28844449-28844756)
chr2 (53-369)||(33135508-33135823)
chr2 (1-223)||(9120157-9120381)
chr2 (71-369)||(26788669-26788969)
chr2 (197-365)||(20605041-20605209)
chr2 (53-359)||(28740302-28740598)
chr2 (53-371)||(10657289-10657607)
chr2 (114-364)||(26601270-26601520)
chr2 (112-360)||(7026497-7026746)
chr2 (239-364)||(9120058-9120183)
chr2 (53-261)||(25288152-25288360)
chr2 (53-360)||(13833441-13833738)
chr2 (53-256)||(18177265-18177468)
chr2 (53-370)||(3463555-3463863)
chr2 (1-346)||(10125259-10125594)
chr2 (123-346)||(3574755-3574978)
chr2 (139-360)||(215320-215541)
chr2 (53-164)||(43078653-43078764)
chr2 (246-371)||(378862-378987)
chr2 (274-364)||(19144914-19145004)
chr2 (286-360)||(43078569-43078643)
chr2 (123-337)||(6224626-6224841)
chr2 (112-175)||(379016-379079)
chr2 (284-363)||(18176474-18176553)
chr2 (284-341)||(2288483-2288538)
chr2 (284-362)||(3858191-3858269)
chr2 (298-360)||(43825085-43825147)
chr2 (132-181)||(21370638-21370687)
chr2 (288-336)||(21987318-21987366)
chr2 (286-338)||(45546956-45547008)
chr2 (53-96)||(6224576-6224619)
chr2 (14-119)||(26601183-26601285)
chr2 (286-336)||(24193576-24193626)
chr2 (286-336)||(29940972-29941022)
chr2 (279-336)||(8172055-8172112)
chr2 (284-336)||(11534862-11534914)
chr2 (284-336)||(34028938-34028990)
[»] chr6 (31 HSPs)
chr6 (16-364)||(6197447-6197795)
chr6 (1-364)||(2300691-2301055)
chr6 (46-363)||(1391513-1391830)
chr6 (46-369)||(29076480-29076805)
chr6 (46-369)||(29111453-29111779)
chr6 (16-336)||(28002581-28002901)
chr6 (53-360)||(31895588-31895895)
chr6 (46-364)||(7051733-7052051)
chr6 (53-360)||(34773301-34773608)
chr6 (53-374)||(14262439-14262760)
chr6 (53-265)||(34759056-34759269)
chr6 (53-223)||(7497105-7497274)
chr6 (53-265)||(30385075-30385275)
chr6 (53-176)||(31067569-31067682)
chr6 (152-336)||(656880-657065)
chr6 (53-161)||(4200443-4200541)
chr6 (284-341)||(5957148-5957205)
chr6 (284-341)||(7100186-7100243)
chr6 (284-341)||(8794387-8794444)
chr6 (231-324)||(3848092-3848185)
chr6 (288-341)||(708937-708990)
chr6 (46-95)||(2238668-2238717)
chr6 (47-87)||(11113733-11113773)
chr6 (284-336)||(31609697-31609749)
chr6 (280-364)||(34759242-34759328)
chr6 (242-336)||(7497034-7497128)
chr6 (132-176)||(3848286-3848330)
chr6 (284-336)||(8636699-8636751)
chr6 (280-312)||(30385248-30385280)
chr6 (284-336)||(10644019-10644071)
chr6 (284-336)||(30877879-30877931)
[»] chr5 (45 HSPs)
chr5 (46-373)||(21146947-21147274)
chr5 (12-363)||(33656007-33656359)
chr5 (15-363)||(27458918-27459265)
chr5 (16-364)||(32157863-32158216)
chr5 (52-335)||(139191-139474)
chr5 (80-363)||(6460682-6460965)
chr5 (16-312)||(5272888-5273184)
chr5 (53-360)||(14000111-14000418)
chr5 (16-265)||(7016708-7016957)
chr5 (56-360)||(4550266-4550570)
chr5 (46-360)||(1152102-1152416)
chr5 (66-223)||(849177-849334)
chr5 (53-336)||(13925848-13926131)
chr5 (46-361)||(9689553-9689864)
chr5 (112-360)||(4240517-4240765)
chr5 (46-360)||(22746190-22746496)
chr5 (123-360)||(37013807-37014044)
chr5 (86-322)||(14465266-14465501)
chr5 (197-361)||(5273111-5273276)
chr5 (53-253)||(7947579-7947779)
chr5 (53-371)||(5948991-5949298)
chr5 (239-364)||(7016889-7017014)
chr5 (53-181)||(39852417-39852545)
chr5 (53-360)||(40013718-40014012)
chr5 (282-364)||(43319135-43319218)
chr5 (53-265)||(1461154-1461356)
chr5 (239-362)||(16894052-16894174)
chr5 (46-308)||(9220716-9220968)
chr5 (284-360)||(7948554-7948630)
chr5 (282-336)||(1511587-1511641)
chr5 (293-363)||(27786210-27786280)
chr5 (284-341)||(26795638-26795695)
chr5 (284-341)||(26806581-26806638)
chr5 (281-318)||(849166-849203)
chr5 (288-341)||(26795521-26795574)
chr5 (284-341)||(26806702-26806759)
chr5 (286-336)||(28594449-28594500)
chr5 (189-223)||(16894044-16894078)
chr5 (286-336)||(17518455-17518505)
chr5 (286-336)||(40410617-40410667)
chr5 (284-341)||(2276210-2276267)
chr5 (280-313)||(9220856-9220889)
chr5 (284-324)||(378272-378312)
chr5 (280-308)||(1461329-1461357)
chr5 (284-364)||(39753434-39753514)
[»] chr7 (82 HSPs)
chr7 (16-363)||(43581059-43581406)
chr7 (16-364)||(44343365-44343713)
chr7 (16-364)||(30440686-30441034)
chr7 (1-364)||(40996603-40996967)
chr7 (16-364)||(18914704-18915052)
chr7 (16-363)||(973074-973422)
chr7 (46-364)||(12893298-12893616)
chr7 (16-363)||(47914157-47914504)
chr7 (12-361)||(20275228-20275577)
chr7 (14-363)||(47879059-47879408)
chr7 (16-365)||(7719229-7719579)
chr7 (1-364)||(34008905-34009265)
chr7 (12-312)||(34695215-34695515)
chr7 (16-362)||(32142886-32143235)
chr7 (53-360)||(29614770-29615077)
chr7 (15-373)||(10068340-10068697)
chr7 (16-364)||(7113343-7113690)
chr7 (53-369)||(28342225-28342541)
chr7 (46-223)||(7718361-7718538)
chr7 (53-360)||(23101185-23101492)
chr7 (65-361)||(727405-727692)
chr7 (114-363)||(31638766-31639015)
chr7 (53-360)||(39783986-39784293)
chr7 (53-369)||(9882243-9882558)
chr7 (16-223)||(39219346-39219552)
chr7 (74-336)||(12963612-12963874)
chr7 (1-336)||(33382548-33382880)
chr7 (53-369)||(18838267-18838583)
chr7 (53-360)||(7993029-7993336)
chr7 (53-360)||(3022813-3023120)
chr7 (46-369)||(3797066-3797379)
chr7 (53-356)||(28034811-28035114)
chr7 (46-364)||(9179766-9180071)
chr7 (47-347)||(19251439-19251729)
chr7 (112-336)||(40460772-40460996)
chr7 (46-336)||(12740284-12740573)
chr7 (193-364)||(8078285-8078457)
chr7 (112-336)||(37327838-37328062)
chr7 (112-360)||(39027984-39028232)
chr7 (76-177)||(43679491-43679592)
chr7 (110-358)||(46405494-46405742)
chr7 (239-363)||(39219526-39219651)
chr7 (123-371)||(17001099-17001347)
chr7 (238-364)||(34695121-34695247)
chr7 (53-254)||(8675326-8675527)
chr7 (81-360)||(32883668-32883948)
chr7 (46-175)||(43187356-43187485)
chr7 (53-336)||(41827225-41827498)
chr7 (273-369)||(43679354-43679451)
chr7 (77-176)||(25805763-25805862)
chr7 (112-336)||(44121965-44122190)
chr7 (56-336)||(44256775-44257055)
chr7 (53-161)||(37972873-37972981)
chr7 (53-265)||(509638-509840)
chr7 (200-360)||(48117746-48117906)
chr7 (90-223)||(10676463-10676596)
chr7 (53-172)||(19810874-19810983)
chr7 (112-262)||(29585500-29585649)
chr7 (112-360)||(33892315-33892564)
chr7 (14-176)||(1470203-1470362)
chr7 (56-262)||(44623295-44623491)
chr7 (244-345)||(10676575-10676676)
chr7 (305-364)||(31401586-31401645)
chr7 (280-369)||(29893001-29893090)
chr7 (280-369)||(43187576-43187665)
chr7 (284-360)||(509585-509661)
chr7 (284-370)||(21067759-21067845)
chr7 (123-181)||(47066770-47066828)
chr7 (63-141)||(10617024-10617102)
chr7 (280-360)||(47066631-47066712)
chr7 (284-336)||(3634240-3634292)
chr7 (284-360)||(37973011-37973087)
chr7 (117-176)||(447854-447913)
chr7 (280-358)||(29585446-29585524)
chr7 (284-339)||(21066806-21066861)
chr7 (284-336)||(34115478-34115530)
chr7 (284-336)||(46037355-46037407)
chr7 (281-312)||(7718512-7718543)
chr7 (286-336)||(27418649-27418699)
chr7 (53-85)||(17001049-17001081)
chr7 (288-336)||(35090115-35090163)
chr7 (284-336)||(40097121-40097173)
[»] chr1 (71 HSPs)
chr1 (16-364)||(21222030-21222377)
chr1 (1-364)||(49198222-49198585)
chr1 (16-364)||(50192520-50192869)
chr1 (46-364)||(35279554-35279872)
chr1 (16-369)||(45759979-45760333)
chr1 (19-364)||(28824346-28824690)
chr1 (16-361)||(47654321-47654669)
chr1 (46-364)||(6304252-6304572)
chr1 (51-364)||(49417966-49418279)
chr1 (16-312)||(19451778-19452074)
chr1 (46-363)||(35679128-35679445)
chr1 (81-364)||(730031-730314)
chr1 (46-348)||(29556006-29556305)
chr1 (46-304)||(45535886-45536150)
chr1 (53-360)||(6312460-6312767)
chr1 (53-360)||(29396395-29396702)
chr1 (75-358)||(48524208-48524490)
chr1 (16-312)||(47780644-47780941)
chr1 (1-360)||(9577390-9577746)
chr1 (53-360)||(25612043-25612350)
chr1 (56-377)||(32588963-32589285)
chr1 (46-364)||(33025394-33025703)
chr1 (53-360)||(15835060-15835367)
chr1 (54-357)||(46327931-46328234)
chr1 (159-369)||(22183247-22183457)
chr1 (53-371)||(28387400-28387718)
chr1 (189-364)||(953701-953876)
chr1 (56-312)||(51701514-51701770)
chr1 (53-360)||(9322507-9322814)
chr1 (53-360)||(48177469-48177776)
chr1 (1-176)||(31572152-31572327)
chr1 (53-360)||(29219174-29219469)
chr1 (46-265)||(37014640-37014859)
chr1 (231-369)||(14494089-14494224)
chr1 (238-364)||(19452042-19452168)
chr1 (132-360)||(49230772-49231000)
chr1 (123-357)||(18798380-18798614)
chr1 (57-360)||(5495117-5495410)
chr1 (273-377)||(47780488-47780592)
chr1 (53-265)||(38536106-38536308)
chr1 (53-265)||(38558324-38558526)
chr1 (189-360)||(8141271-8141442)
chr1 (273-353)||(31572390-31572470)
chr1 (123-360)||(45272473-45272708)
chr1 (114-173)||(955823-955882)
chr1 (46-176)||(48668785-48668905)
chr1 (90-181)||(51085860-51085951)
chr1 (284-341)||(19007584-19007641)
chr1 (284-353)||(25831144-25831213)
chr1 (288-358)||(42290732-42290802)
chr1 (284-341)||(48194612-48194669)
chr1 (284-341)||(48203370-48203427)
chr1 (280-336)||(38536281-38536337)
chr1 (280-336)||(38558499-38558555)
chr1 (284-336)||(42657741-42657793)
chr1 (313-364)||(28541386-28541437)
chr1 (54-156)||(38319996-38320098)
chr1 (284-341)||(51826841-51826898)
chr1 (284-336)||(14555316-14555368)
chr1 (231-312)||(47784363-47784444)
chr1 (288-363)||(27198271-27198346)
chr1 (80-223)||(47784410-47784542)
chr1 (123-173)||(31622536-31622586)
chr1 (46-83)||(48524805-48524842)
chr1 (288-363)||(19893451-19893526)
chr1 (284-363)||(34772311-34772390)
chr1 (54-96)||(18798621-18798663)
chr1 (284-364)||(14229056-14229137)
chr1 (284-336)||(1928409-1928461)
chr1 (284-336)||(10896827-10896879)
chr1 (284-336)||(36402274-36402326)
[»] scaffold0400 (1 HSPs)
scaffold0400 (16-369)||(15003-15353)
[»] scaffold0365 (1 HSPs)
scaffold0365 (16-369)||(15646-15996)
[»] scaffold0037 (1 HSPs)
scaffold0037 (49-364)||(100100-100415)
[»] scaffold0276 (1 HSPs)
scaffold0276 (47-313)||(540-806)
[»] scaffold0151 (2 HSPs)
scaffold0151 (16-223)||(38575-38781)
scaffold0151 (281-363)||(38755-38837)
[»] scaffold0113 (2 HSPs)
scaffold0113 (46-265)||(38895-39114)
scaffold0113 (280-364)||(39087-39171)
[»] scaffold0004 (2 HSPs)
scaffold0004 (46-262)||(102084-102302)
scaffold0004 (280-363)||(102026-102108)
[»] scaffold0543 (1 HSPs)
scaffold0543 (53-360)||(10453-10760)
[»] scaffold1504 (1 HSPs)
scaffold1504 (53-360)||(756-1063)
[»] scaffold0110 (1 HSPs)
scaffold0110 (53-336)||(39624-39907)
[»] scaffold0922 (1 HSPs)
scaffold0922 (116-360)||(4093-4337)
[»] scaffold0651 (1 HSPs)
scaffold0651 (231-361)||(8654-8784)
[»] scaffold0054 (2 HSPs)
scaffold0054 (53-223)||(36914-37084)
scaffold0054 (280-336)||(37057-37113)
[»] scaffold0042 (2 HSPs)
scaffold0042 (53-176)||(58083-58206)
scaffold0042 (284-360)||(58272-58348)
[»] scaffold0306 (3 HSPs)
scaffold0306 (112-265)||(13870-14023)
scaffold0306 (280-370)||(13807-13897)
scaffold0306 (53-85)||(14040-14072)
[»] scaffold0152 (4 HSPs)
scaffold0152 (112-265)||(21304-21457)
scaffold0152 (280-370)||(21430-21520)
scaffold0152 (53-85)||(21255-21287)
scaffold0152 (53-85)||(28510-28542)
[»] scaffold0347 (2 HSPs)
scaffold0347 (46-121)||(14892-14967)
scaffold0347 (284-336)||(14812-14864)
[»] scaffold0839 (1 HSPs)
scaffold0839 (66-152)||(3712-3798)
[»] scaffold0287 (1 HSPs)
scaffold0287 (284-336)||(11793-11845)
[»] scaffold0016 (1 HSPs)
scaffold0016 (286-371)||(81789-81874)
[»] scaffold0007 (2 HSPs)
scaffold0007 (80-173)||(199905-199998)
scaffold0007 (280-347)||(199730-199797)
[»] scaffold0492 (2 HSPs)
scaffold0492 (303-360)||(12030-12087)
scaffold0492 (303-360)||(11999-12056)
[»] scaffold0010 (5 HSPs)
scaffold0010 (231-305)||(233685-233759)
scaffold0010 (280-313)||(233719-233752)
scaffold0010 (231-305)||(234533-234607)
scaffold0010 (280-313)||(234567-234600)
scaffold0010 (280-313)||(222551-222584)
[»] scaffold0472 (1 HSPs)
scaffold0472 (286-364)||(1892-1970)


Alignment Details
Target: chr3 (Bit Score: 264; Significance: 1e-147; HSPs: 102)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 364
Target Start/End: Complemental strand, 19254078 - 19253715
Alignment:
Q  1 agagaagggaggagagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcag 100  Q
    ||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19254078 agagaagggaggagagagagatagtaaaattttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcac 19253979  T
Q  101 tagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaaga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||    
T  19253978 tagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaaga 19253879  T
Q  201 gtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaatacc 300  Q
    |||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  19253878 gtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatacc 19253779  T
Q  301 acaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  19253778 acaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaataaacccc 19253715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 364
Target Start/End: Original strand, 996041 - 996403
Alignment:
Q  1 agagaagggaggagagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcag 100  Q
    |||||||||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  996041 agagaagggaggagagagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcac 996140  T
Q  101 tagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaaga 200  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||    
T  996141 tagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaaga 996240  T
Q  201 gtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaatacc 300  Q
     ||||||||||||| ||||||||       |||||| ||||||||||||||||||||||||||||        |||||||||||||||||||||||||||    
T  996241 atcttgattgaataccacaagacttttttgaaatgataaagaatcttgattgaataacacaagacttttttt-aattggaaagagtcttgattgaatacc 996339  T
Q  301 acaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  996340 acaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 996403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 16 - 364
Target Start/End: Complemental strand, 20498445 - 20498098
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20498445 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 20498346  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||     
T  20498345 aatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatac 20498246  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    ||||||||       |||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||    
T  20498245 cacaagactttttttaaatgacaaagaatcttgattgaataacacaaaactttttttaaattggaaagagtcttgattgaataccacaagactttttcat 20498146  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  20498145 gat-aaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 20498098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 364
Target Start/End: Original strand, 10139097 - 10139464
Alignment:
Q  1 agagaagggaggagagag----agatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatt 96  Q
    ||||||||||||||||||    |||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10139097 agagaagggaggagagagggagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatt 10139196  T
Q  97 tcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgatt 196  Q
    ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||    
T  10139197 tcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgatt 10139296  T
Q  197 aagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaa 296  Q
    |||||||||||||||||| ||||||||       |||||| || |||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  10139297 aagagtcttgattgaataccacaagactttttttaaatgataaggaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaa 10139396  T
Q  297 taccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||    
T  10139397 taccacaagactttttcatgataaaaaagtattttaaaatcccttagaatcatgattcaatacacccc 10139464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 19 - 363
Target Start/End: Original strand, 37820450 - 37820794
Alignment:
Q  19 agatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaat 118  Q
    |||||||||||| |||||||       ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||    
T  37820450 agatagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactggaaaatcccacaaaat 37820549  T
Q  119 ccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcac 218  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||||| |||    
T  37820550 ccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagaatcttgattgaataccac 37820649  T
Q  219 aagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgat 318  Q
    ||||        |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  37820650 aagaatttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagactttttcatgat 37820749  T
Q  319 aaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    |||||||||||||||||| |||||||||||| |||||||| ||||    
T  37820750 aaaaaagtcttttaaaatcccttagaatcattatccaatataccc 37820794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 16 - 365
Target Start/End: Original strand, 3206175 - 3206515
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       ||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  3206175 gagagatagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaa 3206274  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||     
T  3206275 aatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatac 3206374  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    ||||||||          |   ||||||||||||||||||| ||||||||       |||||| ||||||||||||||||||||||||||||||||||||    
T  3206375 cacaagact---------ttttaaagaatcttgattgaataccacaagactttttttaaattgaaaagagtcttgattgaataccacaagactttttcat 3206465  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacacccca 365  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3206466 gataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccca 3206515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 17 - 364
Target Start/End: Complemental strand, 35337968 - 35337622
Alignment:
Q  17 agagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaa 116  Q
    |||||||||||||| |||||||       ||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  35337968 agagatagtaaaatcttaaaagaaaaaaacaatcctaa-aaatctcatgttttcatgaaa-actttttcatgctaaaatttcactagaaaatcccacaaa 35337871  T
Q  117 atccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatc 216  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||       |||||||||||||||||||||||||| |    
T  35337870 atccatcaaaatctgatttattaaacaatccttcgaaatttgaatttttttgaataccactagactttttttaagtgattaagagtcttgattgaatacc 35337771  T
Q  217 acaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatg 316  Q
    |||||||       ||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||     
T  35337770 acaagacttttttaaaatgacaaggaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagactttttcata 35337671  T
Q  317 ataaaaaagtcttttaaaattccttagaatcatga-tccaatacacccc 364  Q
    |||||||||||||||||||| |||||||||||||| || ||||||||||    
T  35337670 ataaaaaagtcttttaaaatcccttagaatcatgattcaaatacacccc 35337622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 46 - 364
Target Start/End: Original strand, 33807798 - 33808120
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  33807798 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 33807897  T
Q  146 ccttcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaat 244  Q
    ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||| ||||||||       ||||||||||||||    
T  33807898 ccttcgaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaat 33807997  T
Q  245 cttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaat---accacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||| |||||||||||||||||       |||||| ||||| | ||||||||||   ||||||||||||||| ||||||||||||||||||||||| ||||    
T  33807998 cttaattgaataacacaagactttttttaaattgaaaagaattttgattgaataccaccacaagacttttttatgataaaaaagtcttttaaaatccctt 33808097  T
Q  342 agaatcatgatccaatacacccc 364  Q
    ||||||||||| |||||||||||    
T  33808098 agaatcatgattcaatacacccc 33808120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 46 - 360
Target Start/End: Complemental strand, 6589770 - 6589455
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||    
T  6589770 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaataat 6589671  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
     |||||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||| ||||||||       ||||||||| ||||     
T  6589670 tcttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccacaagactttttttaaatgacaaggaata 6589571  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgat-aaaaaagtcttttaaaattccttaga 344  Q
    ||||||||||||||||||||       ||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| | |||||||    
T  6589570 ttgattgaataacacaagactttttttaaattagaaagagtcttaattgaataccacaagactttttcatgataaaaaaagtcttttaaagtcccttaga 6589471  T
Q  345 atcatgatccaataca 360  Q
    ||||||||||||||||    
T  6589470 atcatgatccaataca 6589455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 46 - 364
Target Start/End: Original strand, 29448858 - 29449178
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||    
T  29448858 caatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 29448957  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    ||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||       ||||||||| |||||    
T  29448958 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattgagagtcttgattgaatatcacaagactttttgtaaatgacaaggaatc 29449057  T
Q  246 ttgattgaataacacaagac--nnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttag 343  Q
    ||||||||||||||||||||         || ||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||| |||||     
T  29449058 ttgattgaataacacaagacttttttttaaatttggaaagagtattgattgaataccacaagattttttcataataaaaaagtcttttaaaatcccttat 29449157  T
Q  344 aatcatgatccaatacacccc 364  Q
    |||||||||| ||||||||||    
T  29449158 aatcatgatctaatacacccc 29449178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 46 - 364
Target Start/End: Complemental strand, 40247050 - 40246732
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  40247050 caatcataaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 40246951  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    ||||| ||||||||||||||||||||||||||||||       || ||||||| ||||||||||||||| ||||| ||       |||||||||||||||    
T  40246950 ccttccaaatttgaatgattttgaataccactagactttttttaactgattaatagtcttgattgaataccacaaaactttttttaaatgacaaagaatc 40246851  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    |||||||||||||||||||        |||   |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||  |||||||    
T  40246850 ttgattgaataacacaagattttttttaaaccagaaagagtcttgattgaataccacaagactttttcacgataaaaaagttttttaaaatctcttagaa 40246751  T
Q  346 tcatgatccaatacacccc 364  Q
    |||||||||||||||||||    
T  40246750 tcatgatccaatacacccc 40246732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 46 - 343
Target Start/End: Original strand, 44762037 - 44762334
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||    
T  44762037 caatcttaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaat 44762136  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    ||||||||| |||||| ||||| |||||||||||||       ||||||||||||||||||||||||||  ||| |||       |||||||||||||||    
T  44762137 ccttcgaaacttgaataattttaaataccactagactttttttaagtgattaagagtcttgattgaatactacatgactttttttaaatgacaaagaatc 44762236  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttag 343  Q
    ||||||||||||||||||||       |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  44762237 ttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccacaagactttttcattataaaaaagtcttttaaaatcccttag 44762334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 46 - 363
Target Start/End: Complemental strand, 54625798 - 54625481
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  54625798 caatcttaagaaatctcatgttttcatgaaaaactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 54625699  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||||||||||||||  ||||||        ||||||||| ||||     
T  54625698 ccttcgaaatttgaataattttgaataccactagactttttttaagtgattaagagtcttgattgaatacaacaagattttttttaaatgacaacgaata 54625599  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    ||||||||||||||||||||       ||||||||||||||||||||||||||| |||| |   ||||||||||||||| |||| ||||||  |||||||    
T  54625598 ttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatactacaaaaaaatttcatgataaaaaaatcttctaaaatctcttagaa 54625499  T
Q  346 tcatgatccaatacaccc 363  Q
    ||||||||||||||||||    
T  54625498 tcatgatccaatacaccc 54625481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 46 - 364
Target Start/End: Complemental strand, 25418572 - 25418254
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||||||||| |||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  25418572 caatcctaaggaatctcatgttttcatgaaatactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 25418473  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    ||||  ||||||||||||||||||||||| |||||        |||||||||| ||||||||||||||| ||||||||       |||||||||||||||    
T  25418472 cctttcaaatttgaatgattttgaataccgctagattttttgtaagtgattaaaagtcttgattgaataccacaagactttttttaaatgacaaagaatc 25418373  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    ||||||||||||||||||||       ||| |||||||||| ||||||||||||||||| |  |||||||||||||||| | |||||||||  |||||||    
T  25418372 ttgattgaataacacaagactttttttaaaatggaaagagttttgattgaataccacaaaaaattttcatgataaaaaaattttttaaaatctcttagaa 25418273  T
Q  346 tcatgatccaatacacccc 364  Q
    ||||||||||||| |||||    
T  25418272 tcatgatccaataaacccc 25418254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 61 - 364
Target Start/End: Original strand, 51699495 - 51699797
Alignment:
Q  61 tcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaa 160  Q
    ||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  51699495 tcatgttttcacgaaagattttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatcttatttattaaccaatccttcgaaatttgaa 51699594  T
Q  161 tgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacac 260  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||| |||||||        ||||||||||||||||||||||||||| ||    
T  51699595 tgattttgaataccactaga-tttttttaagtgattaagagtcttgattgaataccacaagattttttttaaatgacaaagaatcttgattgaataatac 51699693  T
Q  261 aagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||||       |||||| ||||||||||||||||||||||||| | |||||| |||||||||| |||||||||||   ||| |||||||||||||||||    
T  51699694 aagactttttttaaattgaaaagagtcttgattgaataccacaaaattttttcttgataaaaaaatcttttaaaatcttttataatcatgatccaataca 51699793  T
Q  361 cccc 364  Q
    ||||    
T  51699794 cccc 51699797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 12 - 364
Target Start/End: Complemental strand, 52114769 - 52114418
Alignment:
Q  12 gagagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatccc 111  Q
    ||||| ||||||||||||| |||||||        |||||||||||||||||||||||||  ||||| |||||||||||||||||| | |||||||| ||    
T  52114769 gagagggagatagtaaaatcttaaaagaaaaaaataatcctaagaaatctcatgttttcacaaaagattttttcatgctaaaattttactagaaaattcc 52114670  T
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattg 210  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||        |||||||||| |||||||||||    
T  52114669 acaaaatctatcaaaatctgatttattaaacaatcctgcgaaatttgaattattttgaataccactagacttttttttaagtgattaaaagtcttgattg 52114570  T
Q  211 aatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagacttt 310  Q
    |||| ||||||||       |||||||||||||||||| |||||||||||||||        |||||| ||| ||  |||||||||||||||||||||||    
T  52114569 aataccacaagactttttttaaatgacaaagaatcttggttgaataacacaagattttttttaaattgaaaatag--ttgattgaataccacaagacttt 52114472  T
Q  311 ttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
     ||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  52114471 atcatgataaaaaaatcttttaaaattccttagaatcatgatccagtacacccc 52114418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 16 - 265
Target Start/End: Original strand, 3999615 - 3999864
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    |||||||| |||||| |||||||       |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||    
T  3999615 gagagataataaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcattctaaaatttcactagaaaatcccacaa 3999714  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||     
T  3999715 aatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagattttttttaagtgattaagagtcttgattgaatac 3999814  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagac 265  Q
    ||||||||       |||||||||||||||||||||||||||||||||||    
T  3999815 cacaagactttttttaaatgacaaagaatcttgattgaataacacaagac 3999864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 54 - 360
Target Start/End: Complemental strand, 29030203 - 29029898
Alignment:
Q  54 agaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaa 153  Q
    ||||||||||||||||||| ||| |    |||||| |||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| ||    
T  29030203 agaaatctcatgttttcataaaaaaaaaattcatgttaaaatttcattagaaaattccacaaaatccatcaaaatctgatttattaaacaatccttcaaa 29030104  T
Q  154 atttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattga 253  Q
    ||||||||||||||||||||||| ||||       |||||||||||||||||||||||||| ||||||||       |||||||||||| |||| |||||    
T  29030103 atttgaatgattttgaataccacaagac-ttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagagtcttaattga 29030005  T
Q  254 ataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatc 353  Q
    ||||||||||||        |||| ||| |||||||||||||||||||||| | |||||||||||| |||||||||||||||| ||||||||||||||||    
T  29030004 ataacacaagactttttcttaattagaatgagtcttgattgaataccacaatattttttcatgatataaaagtcttttaaaatcccttagaatcatgatc 29029905  T
Q  354 caataca 360  Q
    |||||||    
T  29029904 caataca 29029898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 36674137 - 36674444
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||||||| |    
T  36674137 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 36674236  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  36674237 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 36674336  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       |||||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  36674337 aataccacaagactttttttaaattgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 36674436  T
Q  353 ccaataca 360  Q
    ||||||||    
T  36674437 ccaataca 36674444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 14 - 323
Target Start/End: Original strand, 53929096 - 53929395
Alignment:
Q  14 gagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccac 113  Q
    |||||||||||||||||||||||||       ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||||||| ||    
T  53929096 gagagagatagtaaaattttaaaagaaaaaaacaatcctaaaaaatctcatgttttcattaaagattttttcatgctaaaatttcactagaaaatcctac 53929195  T
Q  114 aaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaat 213  Q
    ||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||       |||||||||||||||||||||||||    
T  53929196 aaaatccatcaaaatcttatttattaaacaatcgttcgatatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaat 53929295  T
Q  214 atcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttc 313  Q
    | ||||||||       |||||||||||||||||||||||          ||       |||||| ||||||||||||||||||||||||| | ||||||    
T  53929296 accacaagactttttttaaatgacaaagaatcttgattga----------actttttttaaattgaaaagagtcttgattgaataccacaaaattttttc 53929385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 53 - 358
Target Start/End: Original strand, 44906520 - 44906825
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||| ||||| || ||||||| || || ||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  44906520 aagaaatctcatcttttcatgaaagacattttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatccttcga 44906619  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  44906620 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 44906719  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       || ||| ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||  | ||||||| | ||    
T  44906720 aataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaat 44906819  T
Q  353 ccaata 358  Q
    ||||||    
T  44906820 ccaata 44906825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 81 - 365
Target Start/End: Complemental strand, 22057933 - 22057650
Alignment:
Q  81 ttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactaga 180  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  22057933 ttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccatcgaaatttgaatgattttaaataccactaga 22057834  T
Q  181 cnnnnnnnaagtgattaagagtcttgattgaatatcacaag-acnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattgg 279  Q
            ||||||| |||||||||||| ||||| ||||||          |||||||||||||||||||||||||||||||||||       |||||||    
T  22057833 ttttttttaagtgatcaagagtcttgatggaataccacaagttttttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattgg 22057734  T
Q  280 aaagagtcttgattgaataccacaagactttttcatgat-aaaaaagtcttttaaaattccttagaatcatgatccaatacacccca 365  Q
    |||||     ||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  22057733 aaaga---acgattgaataccacaatactttttcatgataaaaaaagtcttttaaaatcccttagaatcatgatccaatacacccca 22057650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 101 - 360
Target Start/End: Original strand, 1440007 - 1440265
Alignment:
Q  101 tagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaaga 200  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||       ||||||||||||    
T  1440007 tagaaaatcccataaaatccatcaaaatctgatttattaaacaatccttggaaatttgaatgattttgaataccactagactttttttaagtgattaaga 1440106  T
Q  201 gtcttgattgaatatcacaagac-nnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaatac 299  Q
    |||||||||||||| ||||| ||        |||||||||||||||||||||||||||||||||||       |||||| ||| ||||||||||||||||    
T  1440107 gtcttgattgaataccacaaaacttttttttaaatgacaaagaatcttgattgaataacacaagac-ttttttaaattgaaaatagtcttgattgaatac 1440205  T
Q  300 cacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    ||||||||||||||||||| ||||||| |||||||||  ||||||||||||| ||||||||    
T  1440206 cacaagactttttcatgat-aaaaagtattttaaaatctcttagaatcatgacccaataca 1440265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 52 - 256
Target Start/End: Original strand, 33996547 - 33996751
Alignment:
Q  52 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcg 151  Q
    |||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  33996547 taagaaatctcatgtttttataaaagactttttcatgctaaaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaatccttcg 33996646  T
Q  152 aaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgatt 251  Q
    |||||||||||||||||||||||||| ||        |||||||||||||||||||||||||| ||||||||       |||||||||||||||||||||    
T  33996647 aaatttgaatgattttgaataccactggattttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 33996746  T
Q  252 gaata 256  Q
    |||||    
T  33996747 gaata 33996751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 53 - 336
Target Start/End: Complemental strand, 11431725 - 11431442
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || |||||||||||||||||| |||||||  |||||||||||||||||||||    
T  11431725 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaccaaaatccaatttattaaacaatccttcga 11431626  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    ||||| |||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||||| |||| ||||    
T  11431625 aatttaaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctttattg 11431526  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||| ||||||||       |||||| ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  11431525 aataccacaagactttttttaaattgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaat 11431442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 53 - 360
Target Start/End: Complemental strand, 40897343 - 40897035
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  40897343 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactataaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 40897244  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||  ||||       ||||||| || ||||||||||||||| | ||||||       |||||||||||| |||||| ||    
T  40897243 aatttgaatgattttgaataccataagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgaatg 40897144  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaaga-ctttttcatgataaaaaagtcttttaaaattccttagaatcatga 351  Q
    |||| ||||||||       || ||| ||| | |||||||||||||||||||||  |||||||| || ||||||| ||||||||| || ||||||| | |    
T  40897143 aataccacaagactttttttaagttgcaaaaaatcttgattgaataccacaagatttttttcataattaaaaagtgttttaaaatcccatagaatcctaa 40897044  T
Q  352 tccaataca 360  Q
    |||||||||    
T  40897043 tccaataca 40897035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 16 - 336
Target Start/End: Original strand, 6035025 - 6035342
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    |||||||||||||||||||||||       ||||| |||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||    
T  6035025 gagagatagtaaaattttaaaagaaaaa--caatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaattttactagaaaatcccacaa 6035122  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| |||||||||||| | |||||||||||||||||||||||||| ||| ||||       ||||||| || | |||||||||||||     
T  6035123 aatccatcaaaatctaatttattaaacattgcttcgaaatttgaatgattttgaatatcacgagactttttttaagtgatgaaaaatcttgattgaatac 6035222  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    | ||||||       |||||||||||| ||||||||||||| ||  | ||       || ||| ||| |  |||||||||||||||||||| ||||||||    
T  6035223 ctcaagacttttttaaaatgacaaagactcttgattgaataccatga-actttatttaagttgcaaaaaaacttgattgaataccacaagattttttcat 6035321  T
Q  316 gataaaaaagtcttttaaaat 336  Q
     || |||||||||||||||||    
T  6035322 aattaaaaagtcttttaaaat 6035342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 53 - 369
Target Start/End: Original strand, 31646293 - 31646607
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    ||||||||||||  ||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||| ||||||||||| |||||    
T  31646293 aagaaatctcat--tttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattcattaaacaatctttcga 31646390  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| |||        || |||| || |||||||||||||||   ||||||       |||| ||||||| |||||||||    
T  31646391 aatttgaatgattttgaataccacaagattttttttaaatgatgaaaagtcttgattgaatacgtcaagacttttttaaaataacaaagagtcttgattg 31646490  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| || |||||       || ||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  31646491 aataccataagactttttttaagttgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 31646590  T
Q  353 ccaatacaccccactta 369  Q
     ||||||| ||| ||||    
T  31646591 tcaatacatccccctta 31646607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 112 - 360
Target Start/End: Complemental strand, 10660675 - 10660427
Alignment:
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 211  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| | ||       || |||| || ||||||||||||    
T  10660675 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaatactttttttaaatgatgaaaagtcttgattga 10660576  T
Q  212 atatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttt 311  Q
    ||| | ||||||       |||||||||||| ||||||||||||| ||||||||       |||||| ||| ||||||||||||||||||||||||||||    
T  10660575 atacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaataccacaagactttt 10660476  T
Q  312 tcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  10660475 tcataattaaaaagtcttttaaaatcccatagaatcttaatccaataca 10660427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 53 - 336
Target Start/End: Complemental strand, 54629043 - 54628759
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  54629043 aagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 54628944  T
Q  153 aatttgaatgattttgaataccactaga-cnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgatt 251  Q
    |||||||||||||||||||||||| |||           ||||| || ||||||||||||||| | ||||||       |||||||||||| ||||||||    
T  54628943 aatttgaatgattttgaataccacaagatttttttttttgtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 54628844  T
Q  252 gaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||| ||||||||       || ||| ||| |||||||||||||||||||||||| ||||||| || |||||||||||||||||    
T  54628843 gaataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagacgttttcataattaaaaagtcttttaaaat 54628759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 53 - 371
Target Start/End: Original strand, 50903247 - 50903568
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| ||||||| ||||| |||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||      
T  50903247 aagaaatctcatattttcataaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttctt 50903346  T
Q  153 aatttgaatgattttgaataccactagac---nnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttga 249  Q
    |||||||||||||||||||||||| ||||          || |||| || ||||||||||||||| |  |||||       |||||||||||| ||||||    
T  50903347 aatttgaatgattttgaataccacaagacttttttttttaaatgataaaaagtcttgattgaataccttaagacttttttaaaatgacaaagagtcttga 50903446  T
Q  250 ttgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcat 349  Q
    ||||||| ||||||||       || ||| ||| ||||||||||||||||||||||||||||||||  | ||||||| ||||||||| || |||||||||    
T  50903447 ttgaataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagactttttcatacttaaaaagtattttaaaatcccatagaatcat 50903546  T
Q  350 gatccaatacaccccacttaat 371  Q
     || ||||||| ||| ||||||    
T  50903547 aattcaatacatcccccttaat 50903568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 53 - 265
Target Start/End: Complemental strand, 17946487 - 17946275
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  17946487 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 17946388  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||| ||| ||||       ||||||| || ||||||||||||||| | ||||||       ||||||||||||||||||||||    
T  17946387 aatttgaatgattttgaatatcacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagaatcttgattg 17946288  T
Q  253 aataacacaagac 265  Q
    |||| ||||||||    
T  17946287 aataccacaagac 17946275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 52617978 - 52618279
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||| ||||||||||| ||      |||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  52617978 aagaaatctcatctttttatgaaagacttgtt------aaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 52618071  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  52618072 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 52618171  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| |||| |||       || ||  ||| | ||||||| |||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  52618172 aatatcacatgactttttttaagttacaaaaaatcttgatcgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 52618271  T
Q  353 ccaataca 360  Q
    | ||||||    
T  52618272 ctaataca 52618279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 123 - 360
Target Start/End: Original strand, 23753463 - 23753700
Alignment:
Q  123 caaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaaga 222  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | |||||    
T  23753463 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaaga 23753562  T
Q  223 cnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaa 322  Q
    |       |||||||||||||||||||||||||| ||||||||       |||||| ||| |||||||||||||||||||||||||||||||| || |||    
T  23753563 cttttttaaaatgacaaagaatcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaataccacaagactttttcataattaaa 23753662  T
Q  323 aagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||||||||||||| |  ||||||| | ||||||||||    
T  23753663 aagtcttttaaaatcctatagaatcctaatccaataca 23753700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 53 - 369
Target Start/End: Complemental strand, 26107460 - 26107144
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||| |||||| |||||||| || ||||||| || || |||||| |||||||||||||||||||  |||||||||||||||||||||    
T  26107460 aagaaatctcatctttttatgaaatactttttcttgttaaaattacactacaaaatcacacaaaatccatcaaaatccaatttattaaacaatccttcga 26107361  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       ||||||||||||||||||||||    
T  26107360 aatttgaatgattttgaataccacaagactttttttaattgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagaatcttgattg 26107261  T
Q  253 aataacac-aagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatga 351  Q
    | ||  || |||||       || ||| ||| |||||||||||||||  ||||||||||||||| || ||||| |||||||||||  | ||||||| | |    
T  26107260 agtacgactaagac-ttttttaagttgcaaaaagtcttgattgaatattacaagactttttcataattaaaaaatcttttaaaatctcatagaatcctaa 26107162  T
Q  352 tccaatacaccccactta 369  Q
    ||||||||| ||| ||||    
T  26107161 tccaatacatccccctta 26107144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 53 - 360
Target Start/End: Complemental strand, 48379356 - 48379050
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    ||||||||| || |||||||||||||| ||||| |  ||||||| || || |||||||||||||||||||||||||   |||||||||||||||||||||    
T  48379356 aagaaatctgatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccatcaaaattcaatttattaaacaatccttcga 48379257  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||| ||||||||| | ||||||       |||||||||||| |||||||||    
T  48379256 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtctagattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 48379157  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    || | |||||||        || ||| ||| | | ||||||||||||||| ||||||||| || || ||||||||||||||||| |  ||||||||| ||    
T  48379156 aa-atcacaagattttttttaagttgcaaaaaattttgattgaataccacgagactttttgataattaaaaagtcttttaaaatcctatagaatcataat 48379058  T
Q  353 ccaataca 360  Q
    ||||||||    
T  48379057 ccaataca 48379050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 53 - 265
Target Start/End: Original strand, 34484037 - 34484249
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  34484037 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 34484136  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| | ||       || |||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  34484137 aatttgaatgattttgaataccacaaaactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 34484236  T
Q  253 aataacacaagac 265  Q
    |||| ||||||||    
T  34484237 aataccacaagac 34484249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 66 - 360
Target Start/End: Original strand, 51737746 - 51738039
Alignment:
Q  66 ttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgatt 165  Q
    |||| ||||||||||||||| || ||||||| ||  | ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  51737746 tttttatgaaagactttttcttgttaaaattacacaacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgatt 51737845  T
Q  166 ttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagac-nnnnnnnaaatgacaaagaatcttgattgaataacacaaga 264  Q
    ||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||        |||||| ||||| ||||||||||||| |||||||    
T  51737846 ttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagactttttttaaaatgataaagagtcttgattgaataccacaaga 51737945  T
Q  265 cnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |       || |||  || ||||||  ||||||||||||||| |||||||| || |||||||||||||||||  | ||||||| | ||||||||||    
T  51737946 ctttttttaagttgctaaaagtctt--ttgaataccacaagattttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 51738039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 5825268 - 5825139
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| ||||||| || |||||||||||||||| |||||||||  ||||||||||||||    
T  5825268 caatcataagaaatctcatgttttcatgaaagcctttttcatgctagaatttcactaaaaaatcccacaaaatctatcaaaatccaatttattaaacaat 5825169  T
Q  146 ccttcgaaatttgaatgattttgaatacca 175  Q
    ||||| ||||||||||||||||||||||||    
T  5825168 ccttcaaaatttgaatgattttgaatacca 5825139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 18749811 - 18749683
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  18749811 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 18749712  T
Q  153 aatttgaatgattttgaataccactagac 181  Q
    |||||||||||||||||||||||| ||||    
T  18749711 aatttgaatgattttgaataccacaagac 18749683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 50762067 - 50762364
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || ||          |||||||||||||||||  |||||| |||||||| |||||    
T  50762067 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttatcaaacaatcattcga 50762156  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||| ||||||||||||||||||| ||||       || | || || |||| |||||||||||| ||||||       |||||||||||| |||||||||    
T  50762157 aattagaatgattttgaataccacaagactttttttaaattatgaaaagtcatgattgaatatctcaagacttttttaaaatgacaaagagtcttgattg 50762256  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       || ||| ||| ||||||||||||||||||||| |||||||||| || ||||||||||||||||| || || |||| | ||    
T  50762257 aataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaatactttttcataattaaaaagtcttttaaaatcccatataatcctaat 50762356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 32580375 - 32580247
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || |||||||| |||||||||||||||||  |||||||||||||||||||||    
T  32580375 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccctcaaaatccatcaaaatccaatttattaaacaatccttcga 32580276  T
Q  153 aatttgaatgattttgaataccactagac 181  Q
    |||||||||||||||||||||||| ||||    
T  32580275 aatttgaatgattttgaataccacaagac 32580247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 57 - 360
Target Start/End: Complemental strand, 20833187 - 20832887
Alignment:
Q  57 aatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatt 156  Q
    ||||| || ||||||||||| |||||||| || ||||||| || ||  ||||| |||||||||||||||||||  |||||||||||||||||||  ||||    
T  20833187 aatcttatcttttcatgaaatactttttcttgttaaaattacactaataaatctcacaaaatccatcaaaatccaatttattaaacaatccttccgaatt 20833088  T
Q  157 tgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaata 256  Q
    |||||||||||||||||||| ||||       ||||||| || | ||||||||||||| | ||||||       |||||||||||| |||||||| ||||    
T  20833087 tgaatgattttgaataccacaagactttttttaagtgatgaaaattcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattaaata 20832988  T
Q  257 acacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaa 356  Q
     ||| ||||       || ||  ||| | ||||||||||||||||||| |||||||||| || ||||| |||||||||||  | ||||||| | ||||||    
T  20832987 ccacgagac---ttttaagttacaaaaaatcttgattgaataccacaaaactttttcataattaaaaaatcttttaaaatctcatagaatcctaatccaa 20832891  T
Q  357 taca 360  Q
    ||||    
T  20832890 taca 20832887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 6131233 - 6131317
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatct 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6131233 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatct 6131317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 53 - 262
Target Start/End: Complemental strand, 52810577 - 52810368
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| |  || |||||||||||||||||||||||||   ||||||||||||||| ||| |    
T  52810577 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacgctacaaaatcccacaaaatccatcaaaattcaatttattaaacaatcattcaa 52810478  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||| ||       |||||||||||| |||||||||    
T  52810477 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaaaacttttttaaaatgacaaagagtcttgattg 52810378  T
Q  253 aataacacaa 262  Q
    |||| |||||    
T  52810377 aataccacaa 52810368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 282 - 364
Target Start/End: Original strand, 12734076 - 12734158
Alignment:
Q  282 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12734076 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 12734158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 46 - 181
Target Start/End: Complemental strand, 27899540 - 27899415
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |          |||||||| ||||||||||||||    
T  27899540 caatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccta----------caaaatctgatttattaaacaat 27899451  T
Q  146 ccttcgaaatttgaatgattttgaataccactagac 181  Q
    ||||||||||||||||||||||||||||||| ||||    
T  27899450 ccttcgaaatttgaatgattttgaataccaccagac 27899415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 1439894 - 1440005
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||||||| ||||||||||||||| |||||||||||||||| | ||||||| | ||||||||||||||||||| |||||||||| ||||||||||||||    
T  1439894 caatcctaaaaaatctcatgttttcgtgaaagactttttcataccaaaattttactagaaaatcccacaaaatctatcaaaatctaatttattaaacaat 1439993  T
Q  146 ccttcgaaattt 157  Q
    ||||| ||||||    
T  1439994 ccttccaaattt 1440005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 78 - 363
Target Start/End: Complemental strand, 55235359 - 55235076
Alignment:
Q  78 actttttcatgctaaaatttcagtagaaaatcccacaaaa-tccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccac 176  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||||||| |  ||||||||||||||| ||||||||||||||||||||||||| ||     
T  55235359 acttttttatgctaaaatttcattagaaaatcccacaaaaatccatcaaaaaccaatttattaaacaatctttcgaaatttgaatgattttgaatatcat 55235260  T
Q  177 tagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaat 276  Q
     ||||       || |||| |||||| ||||||||||| | |  |||       ||||||| ||||||||||||| || | ||||||||       || |    
T  55235259 gagac-ttttttaattgatgaagagttttgattgaatacctcgtgacttttttaaaatgac-aagaatcttgattaaagaccacaagac-ttttttaagt 55235163  T
Q  277 tggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    || |||| |||||||||||||| ||| | | |||||||| || |||||||||||||||||||||||||||| | ||||| |||||||    
T  55235162 tgtaaagggtcttgattgaataacactatattttttcataattaaaaagtcttttaaaattccttagaatcttaatccactacaccc 55235076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 53 - 262
Target Start/End: Complemental strand, 37455050 - 37454851
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| || || ||||||||||||||| ||          ||||||||||||||| |||||    
T  37455050 aagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaattca----------atttattaaacaatcattcga 37454961  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||       ||||||||||||||||||||||    
T  37454960 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatatctcaagacttttttaaaatgacaaagaatcttgattg 37454861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 53 - 265
Target Start/End: Original strand, 10728658 - 10728860
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || ||          |||||||||||||||||  ||||||||||||||||||| |    
T  10728658 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatccttcca 10728747  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    ||||||||||||||| |||||||| ||||       ||||||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  10728748 aatttgaatgattttaaataccacaagactttttgtaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 10728847  T
Q  253 aataacacaagac 265  Q
    |||| ||||||||    
T  10728848 aataccacaagac 10728860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 189 - 362
Target Start/End: Complemental strand, 18749633 - 18749460
Alignment:
Q  189 aagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtct 288  Q
    ||||||| || ||| ||||||||||| | ||||||       |||||||||||| ||||||||||||| ||||||||       || ||| ||| |||||    
T  18749633 aagtgatgaaaagttttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtct 18749534  T
Q  289 tgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacc 362  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||  ||||||| | ||||||||||||    
T  18749533 tgattgaataccacaagactttttcataattaaaaagtcttttaaaattctatagaatcctaatccaatacacc 18749460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 53 - 262
Target Start/End: Complemental strand, 39038229 - 39038030
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||          | ||||||||||||||||||  |||||||||||||| ||||||    
T  39038229 aagaaatctcatctttttatgaaagactttttcttgttaaaattaca----------ctacaaaatccatcaaaatccaatttattaaacaattcttcga 39038140  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||| ||||||| ||||       ||||||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  39038139 aatttgaatgattttggataccacaagacttttttaaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 39038040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 46 - 180
Target Start/End: Complemental strand, 52080117 - 52079999
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||||||||||||||||||||||||      |||||||||||||||||||||| |||||||||||||||||||          | ||||||||||||||    
T  52080117 caatcctaagaaatctcatgttttca------actttttcatgctaaaatttcattagaaaatcccacaaaatc----------tgatttattaaacaat 52080034  T
Q  146 ccttcgaaatttgaatgattttgaataccactaga 180  Q
    ||||| |||||||||||||||||||||||||||||    
T  52080033 ccttcaaaatttgaatgattttgaataccactaga 52079999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 312
Target Start/End: Complemental strand, 44276580 - 44276329
Alignment:
Q  47 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatc 146  Q
    ||||| || ||||||||||| ||||||||||| |||||| || |||||||||| |||||||||||||||||||||          |||||||||||||||    
T  44276580 aatcccaaaaaatctcatgtcttcatgaaagattttttcttgttaaaatttcactagaaaatcccacaaaatcca----------atttattaaacaatc 44276491  T
Q  147 cttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatct 246  Q
    ||    |||||||||||||||||||||||  ||||       ||||||| || | ||||||||||||| | ||||||       |||||||||||| | |    
T  44276490 ct----aatttgaatgattttgaataccatgagactttttttaagtgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagagttt 44276395  T
Q  247 tgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagacttttt 312  Q
    | |||||||| ||||||||       |||||  |||||||||| ||||||||||||| ||||||||    
T  44276394 taattgaataccacaagactttttttaaattacaaagagtcttaattgaataccacatgacttttt 44276329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 231 - 360
Target Start/End: Original strand, 27240428 - 27240557
Alignment:
Q  231 aaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttt 330  Q
    |||||||||||| ||||||||||||| ||||||||       || ||| ||| |||||||||||||||||||||||||||||||| || |||||||||||    
T  27240428 aaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttt 27240527  T
Q  331 taaaattccttagaatcatgatccaataca 360  Q
    ||||||  | ||||||| | ||||||||||    
T  27240528 taaaatctcatagaatcctaatccaataca 27240557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 371
Target Start/End: Original strand, 10728833 - 10728924
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaat 371  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||  | |||||||||| ||| ||||||    
T  10728833 aaagagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaattccatagaatgctaatccaatacatcccccttaat 10728924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 64 - 358
Target Start/End: Complemental strand, 6975924 - 6975643
Alignment:
Q  64 tgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatga 163  Q
    ||||||||||||||||| ||||||||| |||||| | |||||||||||||||| ||||          ||||| |||| ||| |||||||||||||||||    
T  6975924 tgttttcatgaaagactgtttcatgctcaaattttactagaaaatcccacaaattcca----------atttagtaaataattcttcgaaatttgaatga 6975835  T
Q  164 ttttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaag 263  Q
    ||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||| ||||||| ||||||||||||| ||||||    
T  6975834 ttttgaataccacaagac--tttttaaatgatgaaaagtcttgattgaatacctcaagac-tttttaaaataacaaagagtcttgattgaataccacaag 6975738  T
Q  264 acnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaata 358  Q
    ||       || ||  ||||||||||   |||||| |||||||||||||||| || ||||| | |||||||||| | ||||||| | ||||||||    
T  6975737 actttttttaagttacaaagagtcttcgctgaatatcacaagactttttcatcattaaaaaatattttaaaatttcatagaatcctaatccaata 6975643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 181
Target Start/End: Original strand, 39842494 - 39842619
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||||| |||||||||||| |||||||||||||||||||| || ||||||| || ||          |||||||| ||||||||| ||||||||||||||    
T  39842494 caatcccaagaaatctcatcttttcatgaaagactttttcttgttaaaattacatta----------caaaatccgtcaaaatctaatttattaaacaat 39842583  T
Q  146 ccttcgaaatttgaatgattttgaataccactagac 181  Q
     |||||||||||||||||||||||||| ||| ||||    
T  39842584 tcttcgaaatttgaatgattttgaatatcacgagac 39842619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 33807680 - 33807734
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33807680 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcag 33807734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 320
Target Start/End: Original strand, 6131366 - 6131486
Alignment:
Q  199 gagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaata 298  Q
    |||||||||||||||| ||||| ||       ||||||||| | |||||||||||||||||||||||       || |||||||||||||||||||||||    
T  6131366 gagtcttgattgaataacacaaaactttttttaaatgacaatggatcttgattgaataacacaagacttttttcaa-ttggaaagagtcttgattgaata 6131464  T
Q  299 ccacaagactttttcatgataa 320  Q
    |||||| |||||||||||||||    
T  6131465 ccacaaaactttttcatgataa 6131486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 273 - 360
Target Start/End: Original strand, 15493958 - 15494045
Alignment:
Q  273 aaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||||| |||||||||||||| ||||| |||||| |||||||| || ||||||||||||||||| ||||||||| || ||||||||||    
T  15493958 aaattgcaaagagtcttgattaaatactacaagattttttcataattaaaaagtcttttaaaatcccttagaattataatccaataca 15494045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 33996751 - 33996809
Alignment:
Q  306 actttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  33996751 actttttcatgataaaaaagtctttcaaaatcccttagaatcatgatccaatacacccc 33996809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 360
Target Start/End: Complemental strand, 12103729 - 12103524
Alignment:
Q  152 aaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgatt 251  Q
    ||||||||||||||||||||||||  ||||       ||||||| || | ||||||||||||| | ||||||       ||||||||||||||||| |||    
T  12103729 aaatttgaatgattttgaataccatgagactttttttaagtgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagaatcttaatt 12103630  T
Q  252 gaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatga 351  Q
    ||||| ||| ||||       |||||  ||||||| |||||||||||| |||||||| |||||| || |||||||||||||||||  ||||||||  | |    
T  12103629 gaataccacgagactttttt-aaattacaaagagtattgattgaatacaacaagactatttcataattaaaaagtcttttaaaat--cttagaattctaa 12103533  T
Q  352 tccaataca 360  Q
    |||||||||    
T  12103532 tccaataca 12103524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 284 - 360
Target Start/End: Original strand, 39842667 - 39842743
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    ||||||||||||||||||||| |||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  39842667 agtcttgattgaataccacaaaactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 39842743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 52810392 - 52810312
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    ||||||||||||||||||||||||| ||||||||||  | ||||||||||||||||| || ||||||| | ||||||||||    
T  52810392 aaagagtcttgattgaataccacaacactttttcatagttaaaaagtcttttaaaatcccatagaatcctaatccaataca 52810312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 539476 - 539539
Alignment:
Q  118 tccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 181  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  539476 tccatcaaaatccaatttattaaataatccttcgaaatttgaatgattttgaataccacaagac 539539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 364
Target Start/End: Complemental strand, 16010805 - 16010751
Alignment:
Q  310 tttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  16010805 tttcatgataaaaaagtcttttaaaatcccttagaattatgatccaatacacccc 16010751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 280 - 363
Target Start/End: Complemental strand, 38772349 - 38772266
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    ||||| |||||||||||||||||||||||||||||| |  |||||||||||||||||  || |||||| | ||| |||||||||    
T  38772349 aaagaatcttgattgaataccacaagactttttcataaataaaaagtcttttaaaatctctcagaatcctaatctaatacaccc 38772266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 17946302 - 17946248
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaa 334  Q
    ||||| |||||||||||||||||||||||||||||| || |||||||||||||||    
T  17946302 aaagaatcttgattgaataccacaagactttttcataattaaaaagtcttttaaa 17946248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 10105019 - 10105076
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||||||||||| ||||| || |||||||||||||||||||| ||||    
T  10105019 agtcttgattgaataccacaagatttttttataataaaaaagtcttttaaaatccctt 10105076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 10216166 - 10216223
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||||||||||||||||| || |||||||| ||||||||||| ||||    
T  10216166 agtcttgattgaataccacaagacttttttataataaaaaaatcttttaaaatccctt 10216223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 10225674 - 10225731
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||||||||||||||||| || || ||||||| ||||||||||||||    
T  10225674 agtcttgattgaataccacaagacttttttataatcaaaaagttttttaaaattcctt 10225731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 10225795 - 10225852
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||| ||||||||||||| || |||||||||||||||||||| ||||    
T  10225795 agtcttgattgaatagcacaagacttttttataataaaaaagtcttttaaaatccctt 10225852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 539615 - 539695
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    ||||||| |||||||||||||||||| ||||||||| || ||||| |||||||||||  ||||||| | | ||||||||||    
T  539615 aaagagttttgattgaataccacaaggctttttcataattaaaaaatcttttaaaatctcttagaaccctaatccaataca 539695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 2024175 - 2024123
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  2024175 agtcttgattgaataccacaagactttttcataataaaaaaatattttaaaat 2024123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 28146264 - 28146316
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||||||||    
T  28146264 agtcttgattgaataccccatgactttttcatcataaaaaagtcttttaaaat 28146316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 10104902 - 10104955
Alignment:
Q  288 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||||||||||||| || || ||||||| ||||||||||||||    
T  10104902 ttgattgaataccacaagacttttttataatcaaaaagttttttaaaattcctt 10104955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 10216049 - 10216102
Alignment:
Q  288 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||||||||||||| || || ||||||| ||||||||||||||    
T  10216049 ttgattgaataccacaagacttttttataatcaaaaagttttttaaaattcctt 10216102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 361
Target Start/End: Complemental strand, 27899407 - 27899277
Alignment:
Q  231 aaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttt 330  Q
    |||||||||||| ||||||||||||| || | |||       || ||||||||| |||  |||||||||||||| |   |||||| ||||||||||||||    
T  27899407 aaatgacaaagagtcttgattgaataccatatgactttttttaagttggaaagaatctgaattgaataccacaaaaaaatttcataataaaaaagtcttt 27899308  T
Q  331 taaaattccttagaatcatgatccaatacac 361  Q
    ||||||   |||||||||| ||| |||||||    
T  27899307 taaaatcatttagaatcataatctaatacac 27899277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 23535890 - 23535946
Alignment:
Q  125 aaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 181  Q
    |||||| ||| ||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  23535890 aaatctaattaattaaacgatccttctaaatttgaatgattttgaataccacaagac 23535946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 364
Target Start/End: Complemental strand, 52079965 - 52079881
Alignment:
Q  273 aaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||| ||||| || |||||||||||||||||| ||||||||    |||||   |||||||||  ||||||||||||||||||||||||||    
T  52079965 aaattgaaaagaatcatgattgaataccacaagattttttcat----aaaaa---ttttaaaatcacttagaatcatgatccaatacacccc 52079881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 23536003 - 23536058
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgat-aaaaaagtcttttaaa 334  Q
    ||||||||||||||||||||| ||| |||||||||| || ||||||||||||||||    
T  23536003 aaagagtcttgattgaataccgcaatactttttcataataaaaaaagtcttttaaa 23536058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 19552155 - 19552233
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||||||||||||||  |  |||||||| ||||||||||| | ||| ||||   ||||||||||||||    
T  19552155 tcttgattgaataccacaagacttttataaaataaaaaaatcttttaaaatcctttaaaatctcaatccaatacacccc 19552233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 38629807 - 38629885
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||||||||||||||  |  | |||||||||||||||||||  ||  |||| | ||||||||||||||    
T  38629807 tcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaattatttgaaatcttaatccaatacacccc 38629885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 192 - 262
Target Start/End: Original strand, 6131317 - 6131387
Alignment:
Q  192 tgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 262  Q
    ||||||||||||||||||||||| ||||| ||       ||||||||| || |||||||||||||||||||    
T  6131317 tgattaagagtcttgattgaataccacaaaactttttttaaatgacaatgagtcttgattgaataacacaa 6131387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 45215410 - 45215463
Alignment:
Q  288 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||||||| ||||| || || ||||||||||||||||| ||||    
T  45215410 ttgattgaataccacaagatttttttattattaaaaagtcttttaaaatccctt 45215463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 45863040 - 45862983
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcc 110  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || |||||||    
T  45863040 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 45862983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 286 - 363
Target Start/End: Original strand, 50900454 - 50900531
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    ||||||||||||||||||||||||||  |  | |||||||||||||||||| | ||  |||| | |||||||||||||    
T  50900454 tcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttgaaatcttaatccaatacaccc 50900531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 15492874 - 15492942
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatcca 121  Q
    ||||||||| |||  ||||||||||| |||||| || |||||||||| ||||| |||| ||||||||||    
T  15492874 aagaaatcttatgacttcatgaaagattttttcttgttaaaatttcactagaatatcctacaaaatcca 15492942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 34484222 - 34484254
Alignment:
Q  280 aaagagtcttgattgaataccacaagacttttt 312  Q
    |||||||||||||||||||||||||||||||||    
T  34484222 aaagagtcttgattgaataccacaagacttttt 34484254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 46749330 - 46749278
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||||||| | |||||||||||||||| || |||||||| |||||||||||    
T  46749330 agtcttgattcattaccacaagacttttttataataaaaaaatcttttaaaat 46749278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 312
Target Start/End: Original strand, 3999796 - 3999827
Alignment:
Q  281 aagagtcttgattgaataccacaagacttttt 312  Q
    ||||||||||||||||||||||||||||||||    
T  3999796 aagagtcttgattgaataccacaagacttttt 3999827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 369
Target Start/End: Complemental strand, 13662625 - 13662542
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 369  Q
    ||||||||||||||||| ||||||||  |  | |||||||||||||||||||| ||  ||||   |||||||||||||| ||||    
T  13662625 tcttgattgaataccacgagacttttgtaaaacaaaaaagtcttttaaaattctttgaaatctcaatccaatacacccccctta 13662542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 312
Target Start/End: Original strand, 33996692 - 33996723
Alignment:
Q  281 aagagtcttgattgaataccacaagacttttt 312  Q
    ||||||||||||||||||||||||||||||||    
T  33996692 aagagtcttgattgaataccacaagacttttt 33996723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 369
Target Start/End: Original strand, 36055014 - 36055097
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 369  Q
    ||||||||||||||||||||||||||  |  | |||||||||||||||||| | ||  ||||   |||||||||||||| ||||    
T  36055014 tcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttgaaatctcaatccaatacacccccctta 36055097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 26555891 - 26555841
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||||||||||  |  | ||||||||||||||||||    
T  26555891 tcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaat 26555841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 30588916 - 30588866
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||||||||||  |  | ||||||||||||||||||    
T  30588916 tcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaat 30588866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 38682503 - 38682453
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||||| ||||| |  | ||||||||||||||||||    
T  38682503 tcttgattgaataccacaagatttttttaaaacaaaaaagtcttttaaaat 38682453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 44701623 - 44701565
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaa-gtcttttaaaattcctt 341  Q
    ||||||||||||||| ||| |||| ||||||| |||||||| |||||||||||| ||||    
T  44701623 agtcttgattgaatatcactagacattttcattataaaaaatgtcttttaaaatccctt 44701565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 12103789 - 12103733
Alignment:
Q  54 agaaatctca-tgttttcatgaaagactttttcatgctaaaatttcagtagaaaatc 109  Q
    |||||||||| ||| |||||||||||||| ||| || |||||||||| |||||||||    
T  12103789 agaaatctcaatgtcttcatgaaagacttattcttgttaaaatttcactagaaaatc 12103733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 36786050 - 36785998
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||||||||||||||  |||||||||| |  | ||||||||||||||||||    
T  36786050 agtcttgattgaatacctaaagacttttttaaaacaaaaaagtcttttaaaat 36785998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 360
Target Start/End: Original strand, 26374384 - 26374741
Alignment:
Q  1 agagaagggaggagagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcag 100  Q
    ||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  26374384 agagaagggaggagagagagatagtaaaattttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcac 26374483  T
Q  101 tagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaaga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||    
T  26374484 tagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaaga 26374583  T
Q  201 gtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaatacc 300  Q
    |||||||||||||| ||||||||       |||||||||||||||||||||||||||||||  ||       |||||||||||||||||||||||||| |    
T  26374584 gtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacaca--actttttttaaattggaaagagtcttgattgaatatc 26374681  T
Q  301 acaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26374682 acaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaataca 26374741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 374
Target Start/End: Original strand, 42735227 - 42735604
Alignment:
Q  1 agagaagggaggagagag----agatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatt 96  Q
    ||||||||||||||||||    |||||||||||| |||||||       |||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  42735227 agagaagggaggagagagggagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcaagctaaaatt 42735326  T
Q  97 tcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgatt 196  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||       ||||||||    
T  42735327 tcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatacttcgaaatttgaatgattttgaataccactagactttttttaagtgatt 42735426  T
Q  197 aagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaa 296  Q
    ||||||||| |||||||| |||||| |       |||||| ||||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  42735427 aagagtcttaattgaataccacaagtctttttttaaatgataaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaa 42735526  T
Q  297 taccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaatcat 374  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  42735527 taccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccccttaatcat 42735604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 46 - 364
Target Start/End: Original strand, 23115168 - 23115485
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  23115168 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 23115267  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    ||||| |||||||||||| |||||||||||||||||       |||||||||||||||||||||||||| ||||||||       |||||||||||||||    
T  23115268 ccttccaaatttgaatga-tttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagacattttttaaatgacaaagaatc 23115366  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23115367 ttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaa 23115466  T
Q  346 tcatgatccaatacacccc 364  Q
    |||||||||||||||||||    
T  23115467 tcatgatccaatacacccc 23115485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 16 - 364
Target Start/End: Original strand, 2704788 - 2705136
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  2704788 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatatcactagaaaatcccacaa 2704887  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||     
T  2704888 aatccatcaaaatttgatttattaaacaatcattcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatac 2704987  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    ||||||||       |||||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||||||||||||||||||||    
T  2704988 cacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaatttggaaagagtcttgattgaataccacaagactttttcat 2705087  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||| ||||||||||| | ||| |||||||||||||||||||||    
T  2705088 gataaaaaaatcttttaaaatcctttacaatcatgatccaatacacccc 2705136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 16 - 363
Target Start/End: Original strand, 7506868 - 7507215
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  7506868 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttacatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 7506967  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||       ||||||||||||||||||||||||||     
T  7506968 aatccatcaaaatctgatttattaaacaatccttcaaaatttgaatggttttgaataccactagactttttttaagtgattaagagtcttgattgaatac 7507067  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    ||||||||       ||||||||| |||||| |||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||    
T  7507068 cacaagacttttcttaaatgacaaggaatctcgattgaataacacaaacttttttttaaattggaaagagtcttgattgaataccacaagactttttcat 7507167  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7507168 gataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 7507215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 46 - 363
Target Start/End: Original strand, 42938116 - 42938433
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  42938116 caatcctaagaaatctcatgttttcatgaaagactttttcaggctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 42938215  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| ||||||||       |||||||||| ||||    
T  42938216 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaataatc 42938315  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    ||||||||||||||||||||       |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||    
T  42938316 ttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccacaagactttttcatggtaaaaaagtcttttaaaatcccttaaaa 42938415  T
Q  346 tcatgatccaatacaccc 363  Q
    | || |||||||| ||||    
T  42938416 ttataatccaataaaccc 42938433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 16 - 364
Target Start/End: Original strand, 5576589 - 5576938
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  5576589 gagagatagtaaaatcttaaaaggaaaaaacaatcctaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactagaaaatcccacaa 5576688  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaata 214  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||| |||        ||||||||||||||||||||||||||    
T  5576689 aatccatcaaaatctggtttattaaacaattcttcgaaatttgaatgattttgaataccacttgacttttttttaagtgattaagagtcttgattgaata 5576788  T
Q  215 tcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttca 314  Q
     ||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||    
T  5576789 ccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagactatttca 5576888  T
Q  315 tgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||| |||||| ||||||||||| |||||||||||| ||||||||||||||    
T  5576889 tgacaaaaaaatcttttaaaatcccttagaatcataatccaatacacccc 5576938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 361
Target Start/End: Complemental strand, 41479324 - 41478989
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||    
T  41479324 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaattttactagaaaatcccacaa 41479225  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||          | ||||||||||||||| |||||||||||||||||||||||||||| |||||       ||||||||||||||||||||||||||     
T  41479224 aatc----------tgatttattaaacaatcattcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagtcttgattgaatac 41479135  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    ||||||||       |||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||    
T  41479134 cacaagactttttttaaatgacaaagaatcttgattgaataacacaaaactttttttaaattggaaagagtcttgattgaataccacaagactttttcat 41479035  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacac 361  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  41479034 gataaaaaagtcttttaaaatcccttagaatcatgatccaatacac 41478989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 16 - 363
Target Start/End: Complemental strand, 42937588 - 42937250
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       ||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  42937588 gagagatagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttaatgctaaaatttcactagaaaatcccacaa 42937489  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||  |||||||||     
T  42937488 aatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtc--gattgaatac 42937391  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    ||||||||       |||||||||| ||||||||||||||||||||||||       ||||| |        ||||||||||||||||||||||||||||    
T  42937390 cacaagactttttttaaatgacaaaaaatcttgattgaataacacaagactttttttaaatttg-------gttgattgaataccacaagactttttcat 42937298  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  42937297 gataaaaaagtcttttaaaatcccttaaaatcatgatccaatacaccc 42937250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 16 - 265
Target Start/End: Original strand, 24501782 - 24502031
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24501782 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 24501881  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||     
T  24501882 aatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatac 24501981  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagac 265  Q
    ||||||||       |||||| ||||||||||||||||||||||||||||    
T  24501982 cacaagactttttttaaatgataaagaatcttgattgaataacacaagac 24502031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 16 - 361
Target Start/End: Complemental strand, 43959884 - 43959549
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       ||||| |||||||||||||||||| || ||||||||||||||||||||||||||          ||||||    
T  43959884 gagagatagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttaattaaagactttttcatgctaaaatttca----------ccacaa 43959795  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |       |||||||||||| |||||||||||||     
T  43959794 aatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccactagtcttttttgaagtgattaagaatcttgattgaata- 43959696  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    ||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  43959695 cacaagacttttttaaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagactttttcat 43959596  T
Q  316 gataa-aaaagtcttttaaaattccttagaatcatgatccaatacac 361  Q
    ||||| |||||||||||||||| | ||| |||||||||| |||||||    
T  43959595 gataaaaaaagtcttttaaaatcctttaaaatcatgatcaaatacac 43959549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 58 - 365
Target Start/End: Original strand, 32711305 - 32711600
Alignment:
Q  58 atctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaattt 157  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||             |||| |||||||| ||||||||||||||||||||||||||    
T  32711305 atctcttgttttcatgaaagactttttcatgctaaaatttcaatagatt-----------tcca-caaaatctgatttattaaacaatccttcgaaattt 32711392  T
Q  158 gaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataa 257  Q
     |||||||||||||||||||||||       |||||||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||    
T  32711393 aaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataa 32711492  T
Q  258 cacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaat 357  Q
    ||||||||       |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |  |||||||||||||||||||    
T  32711493 cacaagactttttttaaattgaaaagagtcttgattgaataccacaaaactttttcatgataaaaaagtcttttaaagtctcttagaatcatgatccaat 32711592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 14782141 - 14782448
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||||||| |    
T  14782141 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 14782240  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  14782241 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 14782340  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       |||||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  14782341 aataccacaagactttttttaaattgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 14782440  T
Q  353 ccaataca 360  Q
    ||||||||    
T  14782441 ccaataca 14782448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 44725816 - 44726123
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||||||| |    
T  44725816 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 44725915  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  44725916 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 44726015  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       |||||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  44726016 aataccacaagactttttttaaattgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 44726115  T
Q  353 ccaataca 360  Q
    ||||||||    
T  44726116 ccaataca 44726123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 47 - 264
Target Start/End: Original strand, 10392237 - 10392454
Alignment:
Q  47 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatc 146  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  10392237 aatcctaataaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 10392336  T
Q  147 cttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatct 246  Q
    ||||||||||||||||||| |||||||||||||||       |||||||||| |||||||||||||||||||||||        ||||||||||||||||    
T  10392337 cttcgaaatttgaatgattctgaataccactagacttttcttaagtgattaaaagtcttgattgaatatcacaagaattttttaaaatgacaaagaatct 10392436  T
Q  247 tgattgaataacacaaga 264  Q
    ||||||||||||| ||||    
T  10392437 tgattgaataacataaga 10392454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 56 - 370
Target Start/End: Original strand, 18958736 - 18959050
Alignment:
Q  56 aaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaat 155  Q
    |||||| || |||||||||||||||||||| || ||||||| || || ||||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  18958736 aaatctaatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaaaatccaatttattaaacaatccttcgaaat 18958835  T
Q  156 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaat 255  Q
    ||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||| ||||| ||||||||||||    
T  18958836 ttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgataaagagtcttgattgaat 18958935  T
Q  256 aacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatcca 355  Q
    | ||||||||       |||||| ||| |||||||||||||||| ||||||||||||||| || |||||||||||||||||  | ||||||| | |||||    
T  18958936 accacaagactttttttaaattgcaaaaagtcttgattgaatactacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatcca 18959035  T
Q  356 atacaccccacttaa 370  Q
    ||||| ||| |||||    
T  18959036 atacatcccccttaa 18959050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 19717887 - 19718194
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| ||||||| |||||||||||| || ||||||| || || ||||||||||||||||||| ||||||  |||||||||||||| ||||||    
T  19717887 aagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaaaatccaatttattaaacaattcttcga 19717986  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  19717987 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 19718086  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       |||||| ||| ||||||||||||||||| || ||||||||||| || |||| |||||||||||| || ||||||| | ||    
T  19718087 aataccacaagactttttttaaattgcaaaaagtcttgattgaataccgcaggactttttcataattaaaaggtcttttaaaatcccatagaatcctaat 19718186  T
Q  353 ccaataca 360  Q
    ||||||||    
T  19718187 ccaataca 19718194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 10295386 - 10295694
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaa-tccatcaaaatcttatttattaaacaatccttcg 151  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || |||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  10295386 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaaatccatcaaaatccaatttattaaacaatccttcg 10295485  T
Q  152 aaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgatt 251  Q
    ||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       || |||| |||| ||||||||    
T  10295486 aaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagactttttttaagtgacgaagagtcttgatt 10295585  T
Q  252 gaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatga 351  Q
    ||||  || |||||       || ||| ||| |||||||||||||||||||||||||||||||| || ||||| ||||||||||| || ||||||| | |    
T  10295586 gaatgccagaagacttttcttaagttgcaaaaagtcttgattgaataccacaagactttttcataattaaaaactcttttaaaatcccatagaatcctaa 10295685  T
Q  352 tccaataca 360  Q
    |||||||||    
T  10295686 tccaataca 10295694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 56 - 358
Target Start/End: Original strand, 39467477 - 39467778
Alignment:
Q  56 aaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaat 155  Q
    ||||||||| ||||||||||||| |||||| || ||||||| || || ||||||||| |||||||||||||||   ||||||||||||||||||||||||    
T  39467477 aaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatccttcgaaat 39467576  T
Q  156 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaat 255  Q
    ||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||||| ||||||||||||    
T  39467577 ttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 39467676  T
Q  256 aacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatcca 355  Q
    | ||||||||       || ||| ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||  | ||||||| | |||||    
T  39467677 accacaagac-ttttttaagttgtaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatcca 39467775  T
Q  356 ata 358  Q
    |||    
T  39467776 ata 39467778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 53 - 369
Target Start/End: Original strand, 9288463 - 9288772
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  9288463 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatccttcga 9288562  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||||||| || | | ||||||||||| | ||||||       |||||||||||| |||||||||    
T  9288563 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaatttttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 9288662  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       |||||| ||| |||||||       |||||||||||||||||| || |||||||||||||||||  | ||||||||| ||    
T  9288663 aatatcacaagactttttttaaattgcaaaaagtcttg-------accacaagactttttcataattaaaaagtcttttaaaatctcatagaatcataat 9288755  T
Q  353 ccaatacaccccactta 369  Q
    |||||||| ||| ||||    
T  9288756 ccaatacatccccctta 9288772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 46 - 370
Target Start/End: Complemental strand, 4403314 - 4402990
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||||| |||||||||||| |||||||||||||||||||| || ||||||| || || |||||||||||||||||||||||| |  ||||||||||||||    
T  4403314 caatcccaagaaatctcatattttcatgaaagactttttcttgttaaaattacactaaaaaatcccacaaaatccatcaaaacccaatttattaaacaat 4403215  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    ||||||||||||||||||||||||||||||| |||        ||||||| || | |||| ||||||||   |||||        |||||| || || ||    
T  4403214 ccttcgaaatttgaatgattttgaataccacgagattttttttaagtgatgaaaaatcttaattgaatacttcaagatttttttaaaatgaaaatgagtc 4403115  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    ||||||||||| ||||||||       || ||| ||| ||| |||||||||||||| ||||||||||||  || |||||||||||||||||  | || ||    
T  4403114 ttgattgaataccacaagactttttttaagttgcaaaaagttttgattgaataccaaaagactttttcacaattaaaaagtcttttaaaatctcatataa 4403015  T
Q  346 tcatgatccaatacaccccacttaa 370  Q
    |||| |||||||||| ||| |||||    
T  4403014 tcataatccaatacatcccccttaa 4402990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 18305977 - 18306274
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||          ||||||||||||||| |||||    
T  18305977 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatctttcga 18306066  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  18306067 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 18306166  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       || ||| ||| |||||||||||||||||||||||||||||||| || ||||| |||| ||||||||| ||||||| | ||    
T  18306167 aataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagactttttcataattaaaaaatcttctaaaattccatagaatcctaat 18306266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 53 - 360
Target Start/End: Complemental strand, 7466525 - 7466228
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||          |||||||||||||| |||| |    
T  7466525 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaattcttcaa 7466436  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||| ||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  7466435 aatttgaatgattttgaataccacaagactttttttaagcgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 7466336  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       || ||| ||| |||||||||||||||||||||||||||||||| || ||||| |||||||||||  | ||||||| | ||    
T  7466335 aataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagactttttcataattaaaaaatcttttaaaatctcatagaatcctaat 7466236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 53 - 360
Target Start/End: Complemental strand, 26856267 - 26855961
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    ||||||||| || ||||  |||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  26856267 aagaaatcttatttttttctgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatacttcga 26856168  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcac-aagacnnnnnnnaaatgacaaagaatcttgatt 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | | |||||       |||||||||||| ||||||||    
T  26856167 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaaagacttttttaaaatgacaaagagtcttgatt 26856068  T
Q  252 gaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatga 351  Q
    ||||| ||||| |        || ||| ||| ||||||||||||||||||||| |||||||||| ||   |||||||||||||||  | ||||||| | |    
T  26856067 gaataccacaatattttttttaagttgcaaaaagtcttgattgaataccacaaaactttttcataat--taaagtcttttaaaatctcatagaatcctaa 26855970  T
Q  352 tccaataca 360  Q
    |||||||||    
T  26855969 tccaataca 26855961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 123 - 369
Target Start/End: Original strand, 4031334 - 4031580
Alignment:
Q  123 caaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaaga 222  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||       || | || || ||||||||||||||| | |||||    
T  4031334 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaatttatgaaaagtcttgattgaatacctcaaga 4031433  T
Q  223 cnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaa 322  Q
    |       |||||||||||| ||||||||||||| ||||||||       |||||| ||| ||||||||| |||||||||||||||||||||| || |||    
T  4031434 cttttttaaaatgacaaagattcttgattgaataccacaagactttttttaaattgcaaaaagtcttgatcgaataccacaagactttttcataattaaa 4031533  T
Q  323 aagtcttttaaaattccttagaatcatgatccaatacaccccactta 369  Q
    |||||||||||||| || ||||||| | |||||||||| ||| ||||    
T  4031534 aagtcttttaaaatcccatagaatcctaatccaatacatccccctta 4031580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 112 - 360
Target Start/End: Complemental strand, 16362337 - 16362089
Alignment:
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 211  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||       |||| || || ||||||||||||    
T  16362337 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacgagactttttttaagtaatgaaaagtcttgattga 16362238  T
Q  212 atatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttt 311  Q
    ||| | ||||||       |||||||||||| ||||||||||||| |||||||        || ||  ||| ||||||||||||||||||||| ||||||    
T  16362237 atacctcaagacttttttaaaatgacaaagagtcttgattgaatatcacaagattttttttaagttacaaaaagtcttgattgaataccacaaaactttt 16362138  T
Q  312 tcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||| || ||||||||||||||||| || ||||||| | ||| ||||||    
T  16362137 tcataattaaaaagtcttttaaaatcccatagaatcctaatctaataca 16362089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 53 - 265
Target Start/End: Original strand, 43166696 - 43166908
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| ||  | ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  43166696 aagaaatctcatcttttcatgaaaaactttttcttgttaaaattacacaacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 43166795  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||  |||||||||||||||||| ||||||||       ||||  |||| | |||||||||    
T  43166796 aatttgaatgattttgaataccacaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattg 43166895  T
Q  253 aataacacaagac 265  Q
    |||| ||||||||    
T  43166896 aataccacaagac 43166908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 123 - 360
Target Start/End: Complemental strand, 31623825 - 31623588
Alignment:
Q  123 caaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaaga 222  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | |||||    
T  31623825 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaaga 31623726  T
Q  223 cnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaa 322  Q
    |       |||||||||||| ||||||||||||| ||  ||||       || ||  ||| |||||||||||||| ||||||||||||||||| || |||    
T  31623725 cttttttaaaatgacaaagagtcttgattgaataccaagagactttttttaagttacaaaaagtcttgattgaatgccacaagactttttcataattaaa 31623626  T
Q  323 aagtcttttaaaattccttagaatcatgatccaataca 360  Q
    || |||||||||||||| ||||||| | ||||||||||    
T  31623625 aaatcttttaaaattccatagaatcctaatccaataca 31623588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 112 - 369
Target Start/End: Original strand, 42305850 - 42306107
Alignment:
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 211  Q
    ||||||||||| ||||||  ||| |||||||||||||||||||||||||| |||||||||||||| |||        || |||| || ||||||||||||    
T  42305850 acaaaatccattaaaatccaattgattaaacaatccttcgaaatttgaattattttgaataccacaagattttttttaaatgatgaaaagtcttgattga 42305949  T
Q  212 atatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttt 311  Q
    ||| | ||||||       |||||||||||| ||||||||||||| ||||||||       |||||| ||| | ||||||||||||| ||||||||||||    
T  42305950 atacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaattcttgattgaatatcacaagactttt 42306049  T
Q  312 tcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 369  Q
    |||| || |||||||||||||||||  | ||||||| | |||||||||| ||| ||||    
T  42306050 tcataattaaaaagtcttttaaaatcacatagaatcctaatccaatacatccccctta 42306107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 53 - 312
Target Start/End: Complemental strand, 32497715 - 32497466
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| ||||||||||||||||| || || ||||||| || || ||||||||||||||||||          ||||||||||||||| |||||    
T  32497715 aagaaatctcatcttttcatgaaagactttctcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcattcga 32497626  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       |||||||||||| | |||||||    
T  32497625 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtattgattg 32497526  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagacttttt 312  Q
    |||| |||||||        || ||| ||| |||||||||||||||||||||||||||||    
T  32497525 aataccacaagattttttttaagttgcaaaaagtcttgattgaataccacaagacttttt 32497466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 276 - 370
Target Start/End: Complemental strand, 26373782 - 26373687
Alignment:
Q  276 ttggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat-ccaatacaccccacttaa 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||    
T  26373782 ttggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatcccaatacaccccccttaa 26373687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 273 - 364
Target Start/End: Original strand, 24214817 - 24214908
Alignment:
Q  273 aaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  24214817 aaattgaaaagagtcttgattgaataccacaagacttttttatgataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccc 24214908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 4950021 - 4950143
Alignment:
Q  52 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcg 151  Q
    |||||||||| |||||| ||||||| | |||||||||||||||||||| |||||||| ||||||| ||||||||||||| |||||||||| |||| || |    
T  4950021 taagaaatcttatgtttgcatgaaatattttttcatgctaaaatttcactagaaaattccacaaattccatcaaaatctaatttattaaataatcttttg 4950120  T
Q  152 aaatttgaatgattttgaatacc 174  Q
    ||| |||||||||||||||||||    
T  4950121 aaacttgaatgattttgaatacc 4950143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 173
Target Start/End: Original strand, 39189785 - 39189940
Alignment:
Q  14 gagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccac 113  Q
    ||||||||||||||| |||||||||       |||||| |||||||||||||||||||||||||| |||||| || |||||||| | |||||||| |  |    
T  39189785 gagagagatagtaaacttttaaaagaaaaa--caatcccaagaaatctcatgttttcatgaaagattttttcttgttaaaattt-actagaaaattcatc 39189881  T
Q  114 aaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatac 173  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||||| ||||||||    
T  39189882 aaaatccatcaaattca-atttattaaacaatccttcgaaatttgaatgatgttgaatac 39189940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 280 - 364
Target Start/End: Original strand, 24502004 - 24502088
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  24502004 aaagaatcttgattgaataacacaagactttttcatgataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccc 24502088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 66 - 173
Target Start/End: Original strand, 13478269 - 13478376
Alignment:
Q  66 ttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgatt 165  Q
    ||||||| ||||||||| ||||||||||||||   || ||||||| |||||||||| | |||||| |||||||||||||||||||||||||| || ||||    
T  13478269 ttttcataaaagactttatcatgctaaaatttagctaaaaaatcctacaaaatccaacgaaatctaatttattaaacaatccttcgaaatttaaaagatt 13478368  T
Q  166 ttgaatac 173  Q
    ||||||||    
T  13478369 ttgaatac 13478376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 244 - 360
Target Start/End: Complemental strand, 32497492 - 32497376
Alignment:
Q  244 tcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttag 343  Q
    ||||||||||||| ||||||||       || ||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||    
T  32497492 tcttgattgaataccacaagactttttttaagttgtaaaaagtcttgattgaataccacaagactttttcatgattaaaaagtcttttaaaatcccatag 32497393  T
Q  344 aatcatgatccaataca 360  Q
    |||| | ||||||||||    
T  32497392 aatcctaatccaataca 32497376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 231 - 364
Target Start/End: Complemental strand, 8543545 - 8543408
Alignment:
Q  231 aaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagt---cttgattgaataccacaagactttttcatgataaaaaag-t 326  Q
    |||| |||||||||||||||| |||||||||| ||       |||||| |||||||   |||||||||||||||||| ||||||| |||||||||||  |    
T  8543545 aaataacaaagaatcttgattaaataacacaacactttttttaaattgaaaagagtgatcttgattgaataccacaaaacttttttatgataaaaaaaat 8543446  T
Q  327 cttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  8543445 cttttaaaatcccttagaatcatgatctaatacacccc 8543408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 231 - 374
Target Start/End: Original strand, 43166832 - 43166975
Alignment:
Q  231 aaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttt 330  Q
    |||||||||||| ||||||||||||| ||||||||       |||||| ||| |||||||||||||||||||||||||||||| | || ||||||| |||    
T  43166832 aaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaataccacaagactttttcttaattaaaaagtattt 43166931  T
Q  331 taaaattccttagaatcatgatccaatacaccccacttaatcat 374  Q
    |||||| || || |||| | ||||||||||  || |||||||||    
T  43166932 taaaatcccataaaatcttaatccaatacattcctcttaatcat 43166975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 67 - 175
Target Start/End: Original strand, 8410416 - 8410526
Alignment:
Q  67 tttcatgaaagactttttcatgctaaaatttcagtagaaaa--tcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgat 164  Q
    |||| ||||||||||| |||| ||||||||||| || ||||  ||||||||||||||||||| ||  ||||| ||||||||||||| |||||| ||||||    
T  8410416 tttcgtgaaagactttgtcatactaaaatttcactaaaaaaaatcccacaaaatccatcaaagtccaatttagtaaacaatccttccaaatttcaatgat 8410515  T
Q  165 tttgaatacca 175  Q
    |||||||||||    
T  8410516 tttgaatacca 8410526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 288 - 360
Target Start/End: Original strand, 43308520 - 43308592
Alignment:
Q  288 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||||||||||||| ||||||||||||| || |||||||||||||||||||| ||||||| | ||||||||||    
T  43308520 ttgattgaataccagaagactttttcataattaaaaagtcttttaaaattccatagaatcctaatccaataca 43308592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 37857260 - 37857191
Alignment:
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 181  Q
    ||||||||||||||||||  ||||||||||||||||||  |||||||||||| |||||||||||| ||||    
T  37857260 acaaaatccatcaaaatccaatttattaaacaatcctttaaaatttgaatgaatttgaataccacaagac 37857191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 360
Target Start/End: Original strand, 39189955 - 39190084
Alignment:
Q  231 aaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttt 330  Q
    |||||| ||||| | || |||||||| ||||||||       |||||| ||||||||||||||||||||||||| |    ||||| || |||||||||||    
T  39189955 aaatgataaagagtttttattgaataccacaagactttttttaaattgcaaagagtcttgattgaataccacaaaaaaaattcataattaaaaagtcttt 39190054  T
Q  331 taaaattccttagaatcatgatccaataca 360  Q
    |||||| |||||||||| | ||||||||||    
T  39190055 taaaatcccttagaatcctaatccaataca 39190084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 9770439 - 9770503
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcc 110  Q
    |||||||||||||||||||||||| |||||| | ||||| ||| |||||||||| ||||||||||    
T  9770439 caatcctaagaaatctcatgttttgatgaaatatttttttatgttaaaatttcattagaaaatcc 9770503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 14061623 - 14061545
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||||||||||||||| |   |||||||||||||||||||||| || ||||   || |||||||||||    
T  14061623 tcttgattgaataccacaagacttttttactttaaaaaagtcttttaaaattccataaaatcccaatacaatacacccc 14061545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 29260283 - 29260361
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||||||||||||||  |  | |||||||||||||||||| | ||| ||||   ||||||||||||||    
T  29260283 tcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttaaaatctcaatccaatacacccc 29260361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 360
Target Start/End: Original strand, 9771001 - 9771128
Alignment:
Q  231 aaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttt 330  Q
    |||||| ||||| |||||||||||||| |||| ||       || ||| ||||||| ||||||||||  |||||  |||||||||||||||||  | |||    
T  9771001 aaatgagaaagattcttgattgaataaaacaaaactttttttaagttgcaaagagtattgattgaatgacacaatgctttttcatgataaaaa--tattt 9771098  T
Q  331 taaaattccttagaatcatgatccaataca 360  Q
    |||||| ||||| |||| | ||||||||||    
T  9771099 taaaatcccttaaaatcttaatccaataca 9771128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 35142117 - 35142041
Alignment:
Q  288 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||||||||||||| |  |  ||||||||||||||||| | ||| ||||   ||||||||||||||    
T  35142117 ttgattgaataccacaagacttttttaaaacgaaaaagtcttttaaaatccattaaaatctcaatccaatacacccc 35142041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 42366125 - 42366049
Alignment:
Q  288 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||| | ||||||| || |||||||| ||||||||||| | ||  |||||  ||||||||||||||    
T  42366125 ttgattgaataccaccaaacttttttatcataaaaaaatcttttaaaatgctttgaaatcacaatccaatacacccc 42366049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 337
Target Start/End: Original strand, 10802778 - 10802829
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatt 337  Q
    |||||||||||||||| |||||||||  |  |||||||||||||||||||||    
T  10802778 tcttgattgaataccagaagacttttataaaataaaaaagtcttttaaaatt 10802829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 312
Target Start/End: Original strand, 24501963 - 24501994
Alignment:
Q  281 aagagtcttgattgaataccacaagacttttt 312  Q
    ||||||||||||||||||||||||||||||||    
T  24501963 aagagtcttgattgaataccacaagacttttt 24501994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 336
Target Start/End: Original strand, 1606020 - 1606070
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||||||||||  |  | ||||||||||||||||||    
T  1606020 tcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaat 1606070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 2112868 - 2112818
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||||||||||  |  | ||||||||||||||||||    
T  2112868 tcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaat 2112818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 336
Target Start/End: Original strand, 43605371 - 43605421
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||||||||||  |  | ||||||||||||||||||    
T  43605371 tcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaat 43605421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 4302813 - 4302865
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||||||||||||||  |||||||||| |  | ||||||||||||||||||    
T  4302813 agtcttgattgaatacctaaagacttttttaaaacaaaaaagtcttttaaaat 4302865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 7148121 - 7148073
Alignment:
Q  288 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||||||||  |  | ||||||||||||||||||    
T  7148121 ttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaat 7148073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 30382679 - 30382731
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||||||||||||||  |||||||||| |  | ||||||||||||||||||    
T  30382679 agtcttgattgaatacctaaagactttttaaaaacaaaaaagtcttttaaaat 30382731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 240; Significance: 1e-133; HSPs: 97)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 364
Target Start/End: Complemental strand, 22202266 - 22201903
Alignment:
Q  1 agagaagggaggagagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcag 100  Q
    ||||||||||||||||||||||||||||||||||||||       |||| ||||||||||| |||||||||||||||||||||||||||||||||||||     
T  22202266 agagaagggaggagagagagatagtaaaattttaaaagaaaaaaacaatgctaagaaatctaatgttttcatgaaagactttttcatgctaaaatttcac 22202167  T
Q  101 tagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaaga 200  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| || ||||||| |||||||||||||||||||||||       ||||||||||||    
T  22202166 tagaaaatcccacaaaatccatcaaaattttatttattaaacaatcttttgaaattttaatgattttgaataccactagactttttttaagtgattaaga 22202067  T
Q  201 gtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaatacc 300  Q
    |||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| |    
T  22202066 gtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatatc 22201967  T
Q  301 acaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22201966 acaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 22201903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 16 - 364
Target Start/End: Complemental strand, 25331367 - 25331019
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25331367 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 25331268  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||||     
T  25331267 aatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaatac 25331168  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    ||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  25331167 cacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagactttttcat 25331068  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||||||||||||||   |||||||||||||||||||||||||    
T  25331067 gataaaaaagtcttttaaaatcttttagaatcatgatccaatacacccc 25331019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 46 - 369
Target Start/End: Original strand, 41881082 - 41881407
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  41881082 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 41881181  T
Q  146 ccttcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaat 244  Q
    ||||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||| ||||||||       ||||||||||||||    
T  41881182 ccttcgaaatttgaatgattttgaataccactaaacttttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaat 41881281  T
Q  245 cttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgat-aaaaaagtcttttaaaattccttag 343  Q
    |||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||     
T  41881282 cttgattgaataacacaagacttttttaaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaaagtcttttaaaatcccttaa 41881381  T
Q  344 aatcatgatccaatacaccccactta 369  Q
    ||||||||||||||||||||| ||||    
T  41881382 aatcatgatccaatacacccccctta 41881407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 16 - 364
Target Start/End: Complemental strand, 1045043 - 1044698
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||| ||||||| |||||||       |||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1045043 gagagatcgtaaaatcttaaaagaaaaaaacaattctaagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 1044944  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||       ||||||||||||||||||||||||||     
T  1044943 aatccatcaaaatctgatttattaaacaatccttcgaaagttgaatggttttgaataccactagactttttttaagtgattaagagtcttgattgaatac 1044844  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    ||||||||       ||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  1044843 cacaagac--tttttaaatgacaaggaatcttgattgaataacacaagac-ttttttaaattggaaagagtcttgattgaataccacaagactttttcat 1044747  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  1044746 gataaaaaaatcttttaaaatcccttagaatcatgatccaatacacccc 1044698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 47 - 354
Target Start/End: Original strand, 32950837 - 32951144
Alignment:
Q  47 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatc 146  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||    
T  32950837 aatcttaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaaacaatc 32950936  T
Q  147 cttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatct 246  Q
    |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| |||| |||       |||||||||| |||||    
T  32950937 cttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacatgactttttttaaatgacaaataatct 32951036  T
Q  247 tgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaat 346  Q
    |||||||||||||||||||       |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  32951037 tgattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccacaagactttttcattataaaaaagtcttttaaaatcccttagaat 32951136  T
Q  347 catgatcc 354  Q
    ||||||||    
T  32951137 catgatcc 32951144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 12 - 364
Target Start/End: Original strand, 39479321 - 39479675
Alignment:
Q  12 gagagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatccc 111  Q
    |||||||||| |||||||| |||||||       |||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||    
T  39479321 gagagagagagagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgctttcatgaaagactttttcctgctaaaatttcactagaaaatccc 39479420  T
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagac--nnnnnnnaagtgattaagagtcttgatt 209  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| || |         |||||||||||||||||||||    
T  39479421 acaaaatccatcaaaatctgatttattaaacaattcttcgaaatttgaatgattttgaataccacaagtctttttttttaagtgattaagagtcttgatt 39479520  T
Q  210 gaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactt 309  Q
    ||||| ||||||||       ||||||||| |||||||||||||||||||||||||       |||||| ||||||||||||||||||||||||||||||    
T  39479521 gaataccacaagactttttttaaatgacaaggaatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccacaagactt 39479620  T
Q  310 tttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||| |||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  39479621 ttttatgataaaaaagtcttttaaaatttcttaaaatcatgatccaatacacccc 39479675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 14 - 362
Target Start/End: Original strand, 46635616 - 46635959
Alignment:
Q  14 gagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccac 113  Q
    |||||||||||||||||||||||||       |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||    
T  46635616 gagagagatagtaaaattttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactaaaaaatcccac 46635715  T
Q  114 aaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaat 213  Q
    ||||||      |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||       |||||||||||||||||||||||||    
T  46635716 aaaatc------aatcttatttattaaacaatccttcgaaatttgaatgattttgaatactactaaactttttttaagtgattaagagtcttgattgaat 46635809  T
Q  214 atcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagac-ttttt 312  Q
    | ||||||||       ||||||||||||||||||||||||||| ||||||        ||||||||||||||||||||||||||||||||||| |||||    
T  46635810 accacaagactttttttaaatgacaaagaatcttgattgaataatacaagattttttttaaattggaaagagtcttgattgaataccacaagactttttt 46635909  T
Q  313 catgataaaaaagtcttttaaaattccttagaatcatgatccaatacacc 362  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  46635910 catgataaaaaagtcttttaaaatctcttagaatcatgatccaatacacc 46635959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 46 - 363
Target Start/End: Complemental strand, 55303049 - 55302732
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||    
T  55303049 caatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaatatccatcaaaatctgatttattaaacaat 55302950  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| |||| |||       |||||||||||||||    
T  55302949 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacatgacttttttaaaatgacaaagaatc 55302850  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    ||||||||| ||||||||||       |||||| |||||||||||||||||||||| || |||||||||| ||||||||||||| |||||| ||||| ||    
T  55302849 ttgattgaaaaacacaagactttttttaaattgaaaagagtcttgattgaataccataacactttttcattataaaaaagtcttctaaaatcccttaaaa 55302750  T
Q  346 tcatgatccaatacaccc 363  Q
    ||||||| ||||||||||    
T  55302749 tcatgattcaatacaccc 55302732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 46 - 363
Target Start/End: Original strand, 37046450 - 37046769
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaattt-cagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaa 144  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||| |||||||||||||    
T  37046450 caatcctaagaaatctcatattttcatgaaagactttttcatgctaaaattttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaa 37046549  T
Q  145 tccttcgaaatttgaatgattttgaataccactagacnnnnnnn-aagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaa 243  Q
    ||||||||||||||||||||||| |||| ||||||||        |||||||||||||||||||||||||| ||||| ||       |||||||||||||    
T  37046550 tccttcgaaatttgaatgattttaaatatcactagacttttttttaagtgattaagagtcttgattgaataccacaaaactttttttaaatgacaaagaa 37046649  T
Q  244 tcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttag 343  Q
    ||||||||||||||||||||||       |||||| ||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  37046650 tcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccacaagacttttttatgataaaaatatcttttaaaattccttag 37046749  T
Q  344 aatcatgatccaatacaccc 363  Q
    ||||||||||||||||||||    
T  37046750 aatcatgatccaatacaccc 37046769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 16 - 363
Target Start/End: Original strand, 24130951 - 24131289
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagacttttt-catgctaaaatttcagtagaaaatcccaca 114  Q
    ||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||| ||||||||||||||    
T  24130951 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagatttttttcatcctaaaatttcactagaaaatcccaca 24131050  T
Q  115 aaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaata 214  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||          ||||||||||       ||||||||||||||||||||||||||    
T  24131051 aaatccatcaaaatctgatttattaaacaatcattcgaaatttgaat----------accactagactttttttaagtgattaagagtcttgattgaata 24131140  T
Q  215 tcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttca 314  Q
     ||||||||       |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  24131141 ccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagactttttca 24131240  T
Q  315 tgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24131241 tgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 24131289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 16 - 364
Target Start/End: Original strand, 30009647 - 30009995
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       ||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  30009647 gagagatagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaattttactagaaaatcccacaa 30009746  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||| ||  |||||| |||||||||||||||||||||||       ||||||||||||||||||||||||||     
T  30009747 aatccatcaaaatctgatttattaaacaatcatttaaaatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatac 30009846  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    |||| |||       |||||| ||||||| |||||| |||||||||||||       ||||||||||||||||||||||||||| | |||||||||||||    
T  30009847 cacaggactttttttaaatgataaagaattttgattaaataacacaagactttttttaaattggaaagagtcttgattgaatacaataagactttttcat 30009946  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
     ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  30009947 aataaaaatgtcttttaaaatcccttagaatcatgatccaatacacccc 30009995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 46 - 362
Target Start/End: Complemental strand, 1113099 - 1112784
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||| |||||||||||||||||||||||||| ||||||||||||||    
T  1113099 caatcctaagaaatctcatgttttcatgaaagactttttcatgttaaaattttactaggaaatcccacaaaatccatcaaaatctgatttattaaacaat 1113000  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    | || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| ||||||||       |||||||||||||||    
T  1112999 catttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 1112900  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgat-aaaaaagtcttttaaaattccttaga 344  Q
    |||||||||||| |||| ||       |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||  ||||||    
T  1112899 ttgattgaataatacaatactttttttaaatcggaaagagtcttgattgaataacacaagactttttcatgataaaaaaagtcttttaaaat--cttaga 1112802  T
Q  345 atcatgatccaatacacc 362  Q
    ||||||||||||||||||    
T  1112801 atcatgatccaatacacc 1112784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 76 - 363
Target Start/End: Complemental strand, 28541874 - 28541587
Alignment:
Q  76 agactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatacca 175  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  28541874 agactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaatacca 28541775  T
Q  176 ctagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaa 275  Q
    ||||||       |||||||||||||||||||||||||| ||| ||||       |||||||||||||||||||||||||||||||||||       |||    
T  28541774 ctagactttttttaagtgattaagagtcttgattgaataccacgagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaa 28541675  T
Q  276 ttggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    ||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  28541674 ttgaaaagagtcttgattgaataccacaagactttttcataataaaaatgtcttttaaaatcccttagaatcatgatccaatacaccc 28541587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 17 - 344
Target Start/End: Original strand, 34228554 - 34228880
Alignment:
Q  17 agagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaa 116  Q
    |||||||||||||| |||||||       ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  34228554 agagatagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaa 34228653  T
Q  117 atccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatc 216  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||       |||||||||||| | ||||||||||| |    
T  34228654 atccatcaaaatctgatttattaaacaatcattcgaaatttcaatgattttgaataccactagactttttttaagtgattaagaattttgattgaatacc 34228753  T
Q  217 acaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatg 316  Q
    ||| |||       |||||||||||||||||||||||||||||| ||||       |||||| |||||||||||||||||||||||||||||||||||||    
T  34228754 acatgactttttttaaatgacaaagaatcttgattgaataacac-agactttttttaaattgaaaagagtcttgattgaataccacaagactttttcatg 34228852  T
Q  317 ataaaaaagtcttttaaaattccttaga 344  Q
    |||||||||||||||||||| |||||||    
T  34228853 ataaaaaagtcttttaaaatcccttaga 34228880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 46 - 363
Target Start/End: Complemental strand, 7007580 - 7007262
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  7007580 caatcttaagaaatctcatgttttcatgaaaaaaattttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaaacaat 7007481  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| |||| |||       |||||||| ||||||    
T  7007480 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacatgactttttttaaatgacagagaatc 7007381  T
Q  246 ttgattgaataacacaagac-nnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttaga 344  Q
    ||||||||||||||||||||        |||||| ||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||| ||||| |    
T  7007380 ttgattgaataacacaagacttttttttaaattgaaaagagtcttgattgaataccacaaaactttttcattataaaaaagtctattaaaatcccttaaa 7007281  T
Q  345 atcatgatccaatacaccc 363  Q
    |||||||| |||| |||||    
T  7007280 atcatgattcaatccaccc 7007262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 15 - 361
Target Start/End: Original strand, 31314711 - 31315043
Alignment:
Q  15 agagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccaca 114  Q
    ||||||| |||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31314711 agagagagagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccaca 31314810  T
Q  115 aaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaata 214  Q
    |||||          | ||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    |||    
T  31314811 aaatc----------tgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttga----ata 31314896  T
Q  215 tcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttca 314  Q
     ||||||||       ||||||||||||||||||||| |||||||||||||       |||||| ||| ||||||||||||||||||||| |||||||||    
T  31314897 ccacaagactttttttaaatgacaaagaatcttgattaaataacacaagactttttttaaattgaaaaaagtcttgattgaataccacaatactttttca 31314996  T
Q  315 tgataaaaaagtcttttaaaattccttagaatcatgatccaatacac 361  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  31314997 tgataaaaaaatcttttaaaatcccttagaatcatgatccaatacac 31315043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 67 - 369
Target Start/End: Original strand, 19740929 - 19741230
Alignment:
Q  67 tttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattt 166  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19740929 tttcatgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgattt 19741028  T
Q  167 tgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacn 266  Q
    | |||||||| ||||       |||||||||| |||||||| |||||| |||| |||       |||||||||||||||||||||||||||||||||||     
T  19741029 ttaataccacaagactttttttaagtgattaaaagtcttgactgaataccacatgactttttataaatgacaaagaatcttgattgaataacacaagact 19741128  T
Q  267 nnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccac 366  Q
          |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||   |||||||||||||  |||||| ||| |    
T  19741129 ttttttaaattggaaagagtcttgattgaataccacaagattttttcatgat-aaaaagtcttttaaaatcttttagaatcatgattgaatacatccccc 19741227  T
Q  367 tta 369  Q
    |||    
T  19741228 tta 19741230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 76 - 363
Target Start/End: Original strand, 7249795 - 7250090
Alignment:
Q  76 agactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatacca 175  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7249795 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatacca 7249894  T
Q  176 ctagac-------nnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagac-nn 267  Q
    ||||||              |||| || |||||||||||| ||||| |||||||        ||||||| |||||||||||||||||||||||||||       
T  7249895 ctagacttttttttttttttaagttatcaagagtcttgatcgaataccacaagatattttttaaatgactaagaatcttgattgaataacacaagacttt 7249994  T
Q  268 nnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
         |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7249995 tttttaaattgaaaagagtcttgattgaataccacaagattttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 7250090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 90 - 360
Target Start/End: Complemental strand, 23465117 - 23464845
Alignment:
Q  90 taaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnna 189  Q
    |||||||| | |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||       |    
T  23465117 taaaatttaactagaaaatcccacaaaatccatcaaattctgatttattaaacaatccttcgaaatttgaatggttttgaataccactagacttatttta 23465018  T
Q  190 agtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtctt 289  Q
    |||||||||||||||||||||||||| |||| ||       ||||||||| ||||||||||||||||| |||||||       | |||||||||||||||    
T  23465017 agtgattaagagtcttgattgaatattacaaaactttttttaaatgacaaggaatcttgattgaataatacaagactttttttatattggaaagagtctt 23464918  T
Q  290 gattgaataccacaagactttttcatgat--aaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||| ||||||||||    
T  23464917 gattgaataccacaagactttttcatgataaaaaaaaatcttttaaaattccttagaatcataatccaataca 23464845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 53 - 373
Target Start/End: Complemental strand, 5441603 - 5441283
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  5441603 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 5441504  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  5441503 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 5441404  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       |||||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  5441403 aataccacaagactttttttaaattgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 5441304  T
Q  353 ccaatacaccccacttaatca 373  Q
    |||||||| ||| || |||||    
T  5441303 ccaatacatccccctaaatca 5441283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 103 - 363
Target Start/End: Original strand, 25504696 - 25504955
Alignment:
Q  103 gaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagt 202  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||       ||||||||||||||    
T  25504696 gaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatatcactggactttttttaagtgattaagagt 25504795  T
Q  203 cttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccac 302  Q
    ||||||||||||||||||||        ||||||  |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  25504796 cttgattgaatatcacaagaatttttttaaatgatcaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccac 25504895  T
Q  303 aagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    |||||||||||||||||||||||| ||||||||| | |||||| | |||||||||||||||    
T  25504896 aagactttttcatgataaaaaagtattttaaaatccattagaa-cctgatccaatacaccc 25504955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 47 - 364
Target Start/End: Original strand, 40537161 - 40537463
Alignment:
Q  47 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||  |||||||||||||||    
T  40537161 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttca----------ccacaaaatccatcaaaatcagatttattaaacaatc 40537250  T
Q  147 cttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatct 246  Q
     |||||||||| ||||||||||||||||||            |||||||||||||| ||||||||||| ||||||||       |||||||||||| |||    
T  40537251 attcgaaatttaaatgattttgaataccac-----attttttaagtgattaagagttttgattgaataccacaagactttttttaaatgacaaagagtct 40537345  T
Q  247 tgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaat 346  Q
    |||||||||||||||||||       ||||| ||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||| ||||| |||    
T  40537346 tgattgaataacacaagactttttttaaattagaaagagtcttaattgaataccacaagacttttttatgatacaaaagtcttttaaaatcccttacaat 40537445  T
Q  347 catgatccaatacacccc 364  Q
    ||||||||||||||||||    
T  40537446 catgatccaatacacccc 40537463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 46 - 265
Target Start/End: Complemental strand, 12113151 - 12112932
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||| ||||||||||||||    
T  12113151 caatcccaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatccattaaaatctgatttattaaacaat 12113052  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    |||||||||||||||||||||||||||||| |||||       |||||||||||||| ||||||||||| ||||||||       |||||||||||||||    
T  12113051 ccttcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagttttgattgaataccacaagactttttttaaatgacaaagaatc 12112952  T
Q  246 ttgattgaataacacaagac 265  Q
    ||||||||||||||||||||    
T  12112951 ttgattgaataacacaagac 12112932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 53 - 360
Target Start/End: Complemental strand, 27768255 - 27767948
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  27768255 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 27768156  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  27768155 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 27768056  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       |||||| ||| | |||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  27768055 aataccacaagactttttttaaattgcaaaaaatcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 27767956  T
Q  353 ccaataca 360  Q
    ||||||||    
T  27767955 ccaataca 27767948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 53 - 360
Target Start/End: Complemental strand, 54341343 - 54341036
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  54341343 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 54341244  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  54341243 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 54341144  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| || |||||       |||||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  54341143 aataccataagactttttttaaattgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 54341044  T
Q  353 ccaataca 360  Q
    ||||||||    
T  54341043 ccaataca 54341036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 16 - 314
Target Start/End: Complemental strand, 3436829 - 3436531
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       |||| ||||||||||| |||||||||||||| ||||||||||| |||||||||| || ||||||||||||    
T  3436829 gagagatagtaaaatcttaaaagaaaaaaacaattctaagaaatcttatgttttcatgaaaaactttttcatgttaaaatttcactacaaaatcccacaa 3436730  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||        || ||||||||||||||||||||||||    
T  3436729 aattcatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccattagattttttttaaatgattaagagtcttgattgaatat 3436630  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttca 314  Q
    |||||||        ||| |||||| ||||||||||||||||||||| |        |||||| ||||||| |||||||||||||||||||||||||||    
T  3436629 cacaagattttttttaaacgacaaaaaatcttgattgaataacacaatattttttttaaattgaaaagagttttgattgaataccacaagactttttca 3436531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 46 - 361
Target Start/End: Complemental strand, 53276046 - 53275727
Alignment:
Q  46 caatcctaagaaatctcatgttttca-tgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaa 144  Q
    ||||||||| |||||| | ||||| | |||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||| |||||||| ||||    
T  53276046 caatcctaaaaaatctaaagtttttaatgaaagactttttcatgctaaaattttattagaaaatctcacaaaatccatcaaaatctgatttattacacaa 53275947  T
Q  145 tccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaat 244  Q
    ||||||||||||||||||||||| |||| ||||||||       |||||||||| | |||||||||||||  |||||||       |||||||||| |||    
T  53275946 tccttcgaaatttgaatgattttaaatatcactagactttttttaagtgattaaaaatcttgattgaatactacaagactttttttaaatgacaaataat 53275847  T
Q  245 cttgattgaataacacaaga---cnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||| ||||||||||||||||            |||||||||||||||||||||||| |  ||||| ||||||||||||||||  | ||||||||||||||    
T  53275846 ctttattgaataacacaagattttttttttttaattggaaagagtcttgattgaatcctgcaagattttttcatgataaaaatattttttaaaattcctt 53275747  T
Q  342 agaatcatgatccaatacac 361  Q
    ||||||||||||||||||||    
T  53275746 agaatcatgatccaatacac 53275727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 53 - 360
Target Start/End: Complemental strand, 51321120 - 51320813
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| || || |||||  |||||||||||||||||||  |||||||||||||||||||||    
T  51321120 aagaaatctcatcttttcatgaaaaactttttcttgttaaaattacactataaaattacacaaaatccatcaaaatccaatttattaaacaatccttcga 51321021  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  51321020 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 51320921  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||| ||       || ||| ||| ||||||||||||||||||||| | |||||||| || |||||||||||||||||||| ||||||| | ||    
T  51320920 aataccacaaaactttttttaagttgcaaaaagtcttgattgaataccacaaaattttttcataattaaaaagtcttttaaaattccgtagaatcctaat 51320821  T
Q  353 ccaataca 360  Q
    ||||||||    
T  51320820 ccaataca 51320813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 53 - 336
Target Start/End: Original strand, 37828409 - 37828692
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| |  ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  37828409 aagaaatctcatcttttcatgaaagactttttctttttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 37828508  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || | ||||||||||||| | ||||||       |||||||||||| |||||||||    
T  37828509 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaaatcttgattgaatacctcaagactttttaaaaatgacaaagagtcttgattg 37828608  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||| |||||||        || ||| ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  37828609 aataccacaagattttttttaatttgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaat 37828692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 54853475 - 54853782
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  54853475 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 54853574  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    ||||||||| |||||||||||||| ||||       ||||||| || |||||||||||||||   ||||||       |||||| ||||| |||||||||    
T  54853575 aatttgaataattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacttcaagacttttttaaaatgaaaaagagtcttgattg 54853674  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       || ||| ||| |||||||||||||||||||||||||||||| | || |||||||||||||||||||| || |||| | ||    
T  54853675 aataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagactttttcgtaattaaaaagtcttttaaaattccataaaatcctaat 54853774  T
Q  353 ccaataca 360  Q
    ||||||||    
T  54853775 ccaataca 54853782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 42786890 - 42786713
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||| ||||||||||||||||||| | ||||||||||||||    
T  42786890 caatcataagaaatctcatgttttcatgaaagacttttttatgataaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaaacaat 42786791  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagac 223  Q
    ||||||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||| ||||||||    
T  42786790 ccttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccacaagac 42786713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 16 - 209
Target Start/End: Complemental strand, 41321046 - 41320853
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||| ||||||| |||||||       ||||| |||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||||    
T  41321046 gagagatggtaaaatcttaaaagaaaaaatcaatcttaagaaatctcatgtttttatgaaagactttttcatactaaaatttcactagaacatcccacaa 41320947  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgatt 209  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       || ||||||||||||||||||    
T  41320946 aatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgatt 41320853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 75 - 265
Target Start/End: Complemental strand, 25446227 - 25446038
Alignment:
Q  75 aagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatacc 174  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  25446227 aagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaatacc 25446128  T
Q  175 actagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagac 265  Q
    |||||||       |||||||||||||||||||||||||| |||||||        |||||||||| |||||||||||||||| |||||||    
T  25446127 actagactttttttaagtgattaagagtcttgattgaataccacaagaatttttttaaatgacaaa-aatcttgattgaataatacaagac 25446038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 30967316 - 30967613
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    ||||||||| || ||||||||||||| |||||| || ||||||| || || ||||||||||||||||||          |||||||||||||||||| ||    
T  30967316 aagaaatcttattttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcctttga 30967405  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||||||| || | ||||||||||||| | ||| ||       |||||||||||| |||||||||    
T  30967406 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaaatcttgattgaatacctcaaaacttttttaaaatgacaaagagtcttgattg 30967505  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       |||||| ||| |||||||||||||||||||||||||||||||| || ||||| ||||||||||| || || |||||| ||    
T  30967506 aataccacaagactttttttaaattgcaaaaagtcttgattgaataccacaagactttttcataattaaaaaatcttttaaaatcccataaaatcataat 30967605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 53 - 334
Target Start/End: Complemental strand, 32322290 - 32322009
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||| ||||||||| ||||| |  ||||||| || || |||||||||||||||||||||||||   |||||||||||||||||||||    
T  32322290 aagaaatctcatctttttatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccatcaaaattcaatttattaaacaatccttcga 32322191  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||||||| || | ||||||||||||| | ||||||       |||||||||||| ||||||||     
T  32322190 aatttgaatgattttgaataccacaagactatttttaagtgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatta 32322091  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaa 334  Q
    |||| |||| |||       || ||  ||| | ||||||||||||||||||| |||||||||| || |||||||||||||||    
T  32322090 aatatcacatgactttttttaagttacaaaaaatcttgattgaataccacaaaactttttcataattaaaaagtcttttaaa 32322009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 46 - 311
Target Start/End: Complemental strand, 9163274 - 9163017
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||| |||||||||||||||||||||||        ||||||||||||||||| |||||||| ||||||||||||||||||| | ||||||||||||||    
T  9163274 caatcataagaaatctcatgttttcatga--------ttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatttaatttattaaacaat 9163183  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    ||||||||||||||||||||||||||| ||| ||||       | ||||| || | ||||||||||||| ||||||||       |||||||||||| ||    
T  9163182 ccttcgaaatttgaatgattttgaatatcacaagactttttttatgtgatgaaaaatcttgattgaataccacaagactttttttaaatgacaaagagtc 9163083  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttt 311  Q
    ||||||||||| ||||||||       || |||   ||||||||||||||||||||| ||| ||||    
T  9163082 ttgattgaataccacaagactttttttaagttgttgagagtcttgattgaataccacgagattttt 9163017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 56 - 312
Target Start/End: Complemental strand, 37916023 - 37915767
Alignment:
Q  56 aaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaat 155  Q
    |||||| || |||||||||| ||||||||| || ||||| | || || ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  37916023 aaatcttatcttttcatgaatgactttttcttgttaaaagtacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 37915924  T
Q  156 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaat 255  Q
    ||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       |||||| | ||| ||||||||||||    
T  37915923 ttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgatagagagtcttgattgaat 37915824  T
Q  256 aacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagacttttt 312  Q
    | ||||||||       || |   ||| |||||||||||||||||||||||||||||    
T  37915823 accacaagactttttttaagtgacaaaaagtcttgattgaataccacaagacttttt 37915767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 123 - 359
Target Start/End: Original strand, 49834890 - 49835126
Alignment:
Q  123 caaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaaga 222  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||     
T  49834890 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagc 49834989  T
Q  223 cnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaa 322  Q
    |       |||||||||||| ||||||||||||| ||||||||       || ||| ||| ||| |||||||||||||||||||||||||||| || |||    
T  49834990 ctttgttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagttttgattgaataccacaagactttttcataattaaa 49835089  T
Q  323 aagtcttttaaaattccttagaatcatgatccaatac 359  Q
    |||||||||||||| || ||||||| | |||||||||    
T  49835090 aagtcttttaaaatcccatagaatcctaatccaatac 49835126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 110 - 360
Target Start/End: Original strand, 29649731 - 29649981
Alignment:
Q  110 ccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgatt 209  Q
    ||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||    
T  29649731 ccacaaaatccatcaaaatccaatttattaaacaatctttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgatt 29649830  T
Q  210 gaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactt 309  Q
    ||||| | ||||||       |||||||||||| | || ||  |||| ||||||||       |||||| ||| ||||||||||||||||||||| ||||    
T  29649831 gaatacctcaagacttttttaaaatgacaaagagttttaatctaataccacaagactttttttaaattgcaaaaagtcttgattgaataccacaaaactt 29649930  T
Q  310 tttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||||| || |||||||||||||||||  | ||||||| | ||||||||||    
T  29649931 tttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 29649981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 27454078 - 27454256
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||| ||| |||| | ||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||| ||||||||||| |||||||||| |||    
T  27454078 caatcttaacaaatattatgttttcatgaaagactttttcatgccaaaatttcactagaaaattccacaaaattcatcaaaatctgatttattaaataat 27454177  T
Q  146 ccttcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaatatcacaagac 223  Q
    | ||| ||||||||||||||||||||||||||| ||        |||||||||||| |||||||||| ||| |||||||    
T  27454178 ctttcaaaatttgaatgattttgaataccactaaacttttttgtaagtgattaagaatcttgattgattataacaagac 27454256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 48261326 - 48261198
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||||||| |    
T  48261326 aagaaatctcatattttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 48261227  T
Q  153 aatttgaatgattttgaataccactagac 181  Q
    |||||||||||||||||||||||| ||||    
T  48261226 aatttgaatgattttgaataccacaagac 48261198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 44770862 - 44770982
Alignment:
Q  55 gaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaa 154  Q
    ||||||||||||  ||||||||||||||||| |  |||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||| |||    
T  44770862 gaaatctcatgtcgtcatgaaagactttttcttcttaaaatttcactagaaaatcccacaaaatccaccaaaatccaatttattaaacaatccttcaaaa 44770961  T
Q  155 tttgaatgattttgaatacca 175  Q
    |||||||||||||||||||||    
T  44770962 tttgaatgattttgaatacca 44770982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 53 - 336
Target Start/End: Complemental strand, 12913413 - 12913139
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||||| ||||||||| |||||||| || |||||||||| |||||||||||||||||||||          ||||||||||||||||||| |    
T  12913413 aagaaatctcatgtcttcatgaaatactttttcttgttaaaatttcactagaaaatcccacaaaatcca----------atttattaaacaatccttcaa 12913324  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||  ||||       || |||| || |  |||||||||||| | ||||||       |||||||||||| |||| |||     
T  12913323 aatttgaatgattttgaataccatgagactttttttaaatgatgaaaaagcttgattgaatacctcaagacttttttaaaatgacaaagagtcttaatta 12913224  T
Q  253 aataacacaagac-nnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||| ||||||||        |||||  |||||||||||||||||||||||||||||||||||  || ||||| |||||||||||    
T  12913223 aataccacaagacttttttttaaattataaagagtcttgattgaataccacaagactttttcaaaattaaaaaatcttttaaaat 12913139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 231 - 364
Target Start/End: Complemental strand, 41320769 - 41320638
Alignment:
Q  231 aaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttt 330  Q
    |||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||||  ||||||||||| |||||||| |||||    
T  41320769 aaatgacaaagaatcttgattgaataacacaagacattttttaaattggaaacagtcttgattgaataccac--gactttttcataataaaaaaatcttt 41320672  T
Q  331 taaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||   |||||||||||||||||||||||||    
T  41320671 taaaatcttttagaatcatgatccaatacacccc 41320638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 53 - 265
Target Start/End: Complemental strand, 23987403 - 23987201
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || ||          |||||||||||||||||| |||||||||||||||||||||    
T  23987403 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatctaatttattaaacaatccttcga 23987314  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||| ||||||||||| | ||||||       |||||||||||| | |||||||    
T  23987313 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagttttgattgaatacctcaagacttttttaaaatgacaaagagtattgattg 23987214  T
Q  253 aataacacaagac 265  Q
    |||| ||||||||    
T  23987213 aataccacaagac 23987201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 46 - 262
Target Start/End: Original strand, 39307253 - 39307469
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||| ||||||||||||||||||| || | | ||||||||||| |||||||||| |||||||||||||||||| ||||||||    ||| |||||| |||    
T  39307253 caattctaagaaatctcatgtttttatcagaaactttttcatgttaaaatttcactagaaaatcccacaaaattcatcaaaactcaattcattaaataat 39307352  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    | || ||||||||||||||| |||||||||| ||||       || |||| |||| ||||||||||||| ||||||||       ||||| |||| ||||    
T  39307353 ctttagaaatttgaatgattatgaataccacaagactttttttaaatgatgaagaatcttgattgaataccacaagacttttttaaaatggcaaaaaatc 39307452  T
Q  246 ttgattgaataacacaa 262  Q
    ||||||||||| |||||    
T  39307453 ttgattgaataccacaa 39307469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 236 - 363
Target Start/End: Complemental strand, 49469337 - 49469210
Alignment:
Q  236 acaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaa 335  Q
    |||| ||||||| |||||||||||||||||       ||||||||||||||||||||| ||||||||||||||| ||||  | |||||||||||||||||    
T  49469337 acaaggaatcttaattgaataacacaagacttttcttaaattggaaagagtcttgattaaataccacaagacttcttcacaaaaaaaaagtcttttaaaa 49469238  T
Q  336 ttccttagaatcatgatccaatacaccc 363  Q
    |||||| |||||||||||||||||||||    
T  49469237 ttccttggaatcatgatccaatacaccc 49469210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 281 - 364
Target Start/End: Complemental strand, 42786739 - 42786655
Alignment:
Q  281 aagagtcttgattgaataccacaagactttttcatgataa-aaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  42786739 aagagtcttgattgaataccacaagactttttcatgataaaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 42786655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 8712105 - 8711978
Alignment:
Q  11 ggagagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcc 110  Q
    ||||||||||||||||||||||||||||       |||||  ||||||||||||||||| ||||||||||||||| ||||||||||||| || |||||||    
T  8712105 ggagagagagatagtaaaattttaaaagaaaaa--caatctcaagaaatctcatgttttgatgaaagactttttcttgctaaaatttcactataaaatcc 8712008  T
Q  111 cacaaaatccatcaaaatcttatttattaa 140  Q
    |||||||||||||||||||  |||||||||    
T  8712007 cacaaaatccatcaaaatccaatttattaa 8711978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 53 - 337
Target Start/End: Complemental strand, 41725321 - 41725040
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| || || ||||||||||||||| ||||||||||  ||   |||||||||||||| |    
T  41725321 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactataaaatcccacaaaattcatcaaaatccaat---ttaaacaatccttcaa 41725225  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||| ||| ||||       | ||||| || ||||||||||| |||   ||||||       |||||||||||| | |||||||    
T  41725224 aatttgaatgattttgaatatcacaagactttttttaggtgatgaaaagtcttgattgcatacatcaagacttttttaaaatgacaaagagtattgattg 41725125  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatt 337  Q
    |||| ||||| |        || ||| ||| | ||||||||||||| ||||||||||||| || || ||||| ||||||||||||    
T  41725124 aataccacaatattttttttaagttgcaaaaaatcttgattgaatatcacaagacttttttataattaaaaaatcttttaaaatt 41725040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 231 - 370
Target Start/End: Complemental strand, 20021365 - 20021226
Alignment:
Q  231 aaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttt 330  Q
    |||||||||||||||||||||||||| ||||| ||       |||||| |||||||||||||| ||||||||||||||||||||| || |||||||||||    
T  20021365 aaatgacaaagaatcttgattgaataccacaaaactttttttaaattgcaaagagtcttgattaaataccacaagactttttcataattaaaaagtcttt 20021266  T
Q  331 taaaattccttagaatcatgatccaatacaccccacttaa 370  Q
    |||||| ||||| ||| || |||||||||| ||| |||||    
T  20021265 taaaatcccttaaaattataatccaatacatcccccttaa 20021226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 112 - 360
Target Start/End: Complemental strand, 50018391 - 50018143
Alignment:
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 211  Q
    ||||||||||| |||||   ||||||||||||||||||| ||||||||||||| ||||||||||| ||||       || |||  || ||||||||| ||    
T  50018391 acaaaatccattaaaattcaatttattaaacaatccttcaaaatttgaatgatcttgaataccacaagactttttttaaatgaagaaaagtcttgatgga 50018292  T
Q  212 atatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttt 311  Q
    ||| | ||||||       |||||||||||| ||||||||||||| || |||||       |||||| ||| ||||||||||||||||||||||||||||    
T  50018291 atacctcaagacttttttaaaatgacaaagagtcttgattgaataccataagactttttttaaattgtaaaaagtcttgattgaataccacaagactttt 50018192  T
Q  312 tcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    | || || ||||| | ||||||||| || ||||||  | ||||||||||    
T  50018191 ttataattaaaaaatattttaaaatcccatagaattctaatccaataca 50018143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 37915839 - 37915673
Alignment:
Q  198 agagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaat 297  Q
    ||||||||||||||||| ||||||||       || ||||||| | ||||||||||||| ||||||||       || ||  ||| ||||||||||||||    
T  37915839 agagtcttgattgaataccacaagactttttttaagtgacaaaaagtcttgattgaataccacaagactttttttaagttacaaaaagtcttgattgaat 37915740  T
Q  298 accacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||||||||||| || ||||||||||||||||| || ||||||||| ||||||||||||||    
T  37915739 accacaagactttttcataattaaaaagtcttttaaaatcccatagaatcataatccaatacacccc 37915673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 56445362 - 56445474
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||||| || ||||||||||||||| ||||||| ||||| |||||||||||||||||||||          ||||||||||||||| |||||    
T  56445362 aagaaatctcatgtctttatgaaagactttttcttgctaaagtttcactagaaaatcccacaaaatcca----------atttattaaacaatcattcga 56445451  T
Q  153 aatttgaatgattttgaatacca 175  Q
    |||||||||||||||||||||||    
T  56445452 aatttgaatgattttgaatacca 56445474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 90 - 265
Target Start/End: Complemental strand, 28371086 - 28370911
Alignment:
Q  90 taaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnna 189  Q
    |||||||||| |||||||||||||||||| || ||||||   ||||||||||||||||||  ||||||||||||||||||||||||  ||||       |    
T  28371086 taaaatttcactagaaaatcccacaaaattcaccaaaattcaatttattaaacaatcctttaaaatttgaatgattttgaataccatgagactttattta 28370987  T
Q  190 agtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagac 265  Q
    |||||| || ||| ||||||||||||| ||||||       ||| |||||||| | ||||||||||| ||||||||    
T  28370986 agtgataaaaagttttgattgaatatctcaagacttttttaaaacgacaaagagttttgattgaataccacaagac 28370911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 53 - 265
Target Start/End: Original strand, 36479249 - 36479450
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||||||||||| |||||||||||  ||||||||||||| ||           ||||||||||||||||  |||||||||| ||||||||||    
T  36479249 aagaaatctcatgttttcataaaagacttttttttgctaaaatttcacta-----------aaaatccatcaaaatccaatttattaaataatccttcga 36479337  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    ||||||||| |||||||||||||| ||||       ||||||| || | |||| |||||||| | ||||||       |||||||||||| | |||||||    
T  36479338 aatttgaataattttgaataccacgagactttttttaagtgatgaaaaatcttaattgaatacctcaagacttttttaaaatgacaaagagttttgattg 36479437  T
Q  253 aataacacaagac 265  Q
    |||| ||||||||    
T  36479438 aataccacaagac 36479450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 24736534 - 24736447
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaa 140  Q
    ||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| |||||||||||||||||||  |||||||||    
T  24736534 aagaaatctcatgttttcatgaaagacttcttcttgttaaaatttcactagaaaatctcacaaaatccatcaaaatccaatttattaa 24736447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 49501526 - 49501827
Alignment:
Q  53 aagaaatctcatgttttcat--gaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttc 150  Q
    |||||||||||| |||| ||  ||||||||||||| || ||||||| || || ||||| ||||||||||||          ||||||||||||||| |||    
T  49501526 aagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattccacaaaatcca----------atttattaaacaatcattc 49501615  T
Q  151 gaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgat 250  Q
    ||||||||||||||||||||| |||| ||||       ||||||| || ||||||||||||||| | |||||        |||||||||||| |||||||    
T  49501616 gaaatttgaatgattttgaatgccacaagacattttttaagtgatgaaaagtcttgattgaatacctcaagatttatttaaaatgacaaagagtcttgat 49501715  T
Q  251 tgaataacacaagac-nnnnnnnaaattggaaagagtctt-gattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatca 348  Q
    ||||||   ||||||        |||||  ||| |||||| |||| ||||||||||||||||||||| || ||||| ||||||||||| || |||||||     
T  49501716 tgaatactgcaagacttttttttaaattacaaaaagtcttagattcaataccacaagactttttcataattaaaaaatcttttaaaatcccatagaatcc 49501815  T
Q  349 tgatccaataca 360  Q
    | ||| ||||||    
T  49501816 taatcaaataca 49501827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 49507591 - 49507892
Alignment:
Q  53 aagaaatctcatgttttcat--gaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttc 150  Q
    |||||||||||| |||| ||  ||||||||||||| || ||||||| || || ||||| ||||||||||||          ||||||||||||||| |||    
T  49507591 aagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattccacaaaatcca----------atttattaaacaatcattc 49507680  T
Q  151 gaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgat 250  Q
    ||||||||||||||||||||| |||| ||||       ||||||| || ||||||||||||||| | |||||        |||||||||||| |||||||    
T  49507681 gaaatttgaatgattttgaatgccacaagacattttttaagtgatgaaaagtcttgattgaatacctcaagatttatttaaaatgacaaagagtcttgat 49507780  T
Q  251 tgaataacacaagac-nnnnnnnaaattggaaagagtctt-gattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatca 348  Q
    ||||||   ||||||        |||||  ||| |||||| |||| ||||||||||||||||||||| || ||||| ||||||||||| || |||||||     
T  49507781 tgaatactgcaagacttttttttaaattacaaaaagtcttagattcaataccacaagactttttcataattaaaaaatcttttaaaatcccatagaatcc 49507880  T
Q  349 tgatccaataca 360  Q
    | ||| ||||||    
T  49507881 taatcaaataca 49507892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 46 - 121
Target Start/End: Complemental strand, 11090510 - 11090435
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatcca 121  Q
    |||||||||||||||||||||||| || ||||||||||| |||||||||||||| || ||||||||||||||||||    
T  11090510 caatcctaagaaatctcatgtttttattaaagactttttaatgctaaaatttcactaaaaaatcccacaaaatcca 11090435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 286 - 363
Target Start/End: Complemental strand, 25446059 - 25445983
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||    
T  25446059 tcttgattgaataatacaagactttttcatgataaaaaagtcttttaaaatcccttaaaatcat-atccaatacaccc 25445983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 47 - 223
Target Start/End: Complemental strand, 28484093 - 28483928
Alignment:
Q  47 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatc 146  Q
    |||| ||||||||||| | |||||||||||||||||||| || |||| || || || ||||||| ||||||||||          |||||||||| ||||    
T  28484093 aatcttaagaaatctcgtcttttcatgaaagactttttcttgttaaa-ttacactacaaaatcctacaaaatcca----------atttattaaataatc 28484005  T
Q  147 cttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagac 223  Q
    |||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||    
T  28484004 cttcgaaatttgaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 28483928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 123 - 265
Target Start/End: Original strand, 32684065 - 32684206
Alignment:
Q  123 caaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaaga 222  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||| |    
T  32684065 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacttttttaaa-tgatgaaaagtcttgattgaatacctcaata 32684163  T
Q  223 cnnnnnnnaaatgacaaagaatcttgattgaataacacaagac 265  Q
    |       ||||||||||||||||| |||||||| ||||||||    
T  32684164 cttttttaaaatgacaaagaatcttaattgaataccacaagac 32684206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 280 - 359
Target Start/End: Complemental strand, 28370938 - 28370859
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatac 359  Q
    ||||||| |||||||||||||||||||||||||||| || |||||||| |||||||||| |||||||| | |||||||||    
T  28370938 aaagagttttgattgaataccacaagactttttcataattaaaaagtcctttaaaattcattagaatcctaatccaatac 28370859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 280 - 369
Target Start/End: Complemental strand, 23987228 - 23987139
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 369  Q
    ||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| || || |||| | |||||||||| ||| ||||    
T  23987228 aaagagtattgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatccaatacatccccctta 23987139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 273 - 360
Target Start/End: Complemental strand, 24736422 - 24736336
Alignment:
Q  273 aaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||||| ||||||||||||||||||| |||||||| ||| ||| || ||||| |||||||||||||||||||||| | ||||||||||    
T  24736422 aaattgcaaagagtcttgattgaatatcacaagacattt-cataattaaaaaatcttttaaaattccttagaatcctaatccaataca 24736336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 52 - 181
Target Start/End: Original strand, 41581795 - 41581923
Alignment:
Q  52 taagaaatctcatgttttcatgaaagacttttt-catgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttc 150  Q
    ||||||||||||||||| ||||||| | ||||| |||| |||||||||| ||||||||||||||||||  |||  ||||  ||||||||||||||  |||    
T  41581795 taagaaatctcatgtttacatgaaatatttttttcatgttaaaatttcactagaaaatcccacaaaatatatc--aatccaatttattaaacaattattc 41581892  T
Q  151 gaaatttgaatgattttgaataccactagac 181  Q
     |||||||||||| | | |||||||| ||||    
T  41581893 aaaatttgaatgactctaaataccacgagac 41581923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 363
Target Start/End: Original strand, 27454335 - 27454407
Alignment:
Q  291 attgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    |||||||| ||||| | |||||||| |||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  27454335 attgaatatcacaaaattttttcattataaaacagtcttttaaaattccttaaaatcatgatccaatataccc 27454407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 273 - 360
Target Start/End: Complemental strand, 467862 - 467775
Alignment:
Q  273 aaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||||| ||| | |||| ||||||||| |||| |||||||||| || ||||| ||||||||||||||| |||||||| ||||||||||    
T  467862 aaattgcaaataatcttaattgaatacgacaaaactttttcataattaaaaaatcttttaaaattcctaagaatcataatccaataca 467775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 20021531 - 20021436
Alignment:
Q  55 gaaatctcatgttttcatgaaagactttttcat-gctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatcctt 149  Q
    ||||||| |||| ||||||||||| |||||  | | |||||||||| || ||||||||| |||||||| |||||||| ||||||||||||||||||    
T  20021531 gaaatcttatgtcttcatgaaagattttttttttgttaaaatttcattaaaaaatcccataaaatccagcaaaatctaatttattaaacaatcctt 20021436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 284 - 375
Target Start/End: Complemental strand, 44646800 - 44646709
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaatcatt 375  Q
    ||||||||||||||||||||||| ||||| || || |||||||||||||||||  |||  |||| |||| ||||||||||| ||||| ||||    
T  44646800 agtcttgattgaataccacaagatttttttatcattaaaaagtcttttaaaatctcttgaaatcttgattcaatacaccccccttaaacatt 44646709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 5800107 - 5800049
Alignment:
Q  123 caaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 181  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  5800107 caaaatccaatttattaaacaatcctttgaaatttgaatgattttgaataccacaagac 5800049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 358
Target Start/End: Complemental strand, 29855661 - 29855576
Alignment:
Q  273 aaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaata 358  Q
    |||||| ||| |||||| |||||||| |||||||||||||||| ||  |||| |||||||||||||| ||||||| | ||||||||    
T  29855661 aaattgcaaaaagtcttaattgaatatcacaagactttttcataatttaaaaatcttttaaaattccatagaatcctaatccaata 29855576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 38230851 - 38230794
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||| ||||    
T  38230851 agtcttgattgaataccactagactttttcattctaaaaaagtcttttaaaatccctt 38230794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 28483951 - 28483899
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||| |||||||||||||| || |||||||||||||||||    
T  28483951 agtcttgattgaatacctcaagactttttcataattaaaaagtcttttaaaat 28483899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 32684179 - 32684259
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    ||||| |||| ||||||||||||||||||||||||| || |||||||| ||||||||||  ||||||| | || |||||||    
T  32684179 aaagaatcttaattgaataccacaagactttttcataattaaaaagtcctttaaaattctatagaatcctaattcaataca 32684259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 36479423 - 36479501
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||  | ||||||||||    
T  36479423 aaagagttttgattgaataccacaagactttttcataattaaaaa-tcttttaaaatt-cttagaattctaatccaataca 36479501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 284 - 369
Target Start/End: Original strand, 28100587 - 28100673
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgat-aaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 369  Q
    ||||||||||||||||||||||||||||| || || |||||||||||||||||  ||||  ||||   |||||||||||||| ||||    
T  28100587 agtcttgattgaataccacaagacttttttataataaaaaaagtcttttaaaaccccttgaaatcccaatccaatacacccccctta 28100673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 44771046 - 44771095
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtctt 329  Q
    ||||||||||||||||||| |||||||||||||||| || ||||||||||    
T  44771046 aaagagtcttgattgaatatcacaagactttttcataatcaaaaagtctt 44771095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 28847111 - 28847159
Alignment:
Q  288 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||||||    
T  28847111 ttgattgaataccactagacttttttattataaaaaagtcttttaaaat 28847159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 39307404 - 39307501
Alignment:
Q  239 aagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||||||||||||||| ||||||||       |||| | ||| | ||||||||||||||||||| ||||||| || ||| ||| ||||||||||||    
T  39307404 aagaatcttgattgaataccacaagacttttttaaaatggcaaaaaatcttgattgaataccacaaaactttttgataatataaatgtcttttaaaat 39307501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 41762058 - 41761978
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||| |||||||||||||||||| || || | ||||||||||||||| | ||| ||||   ||||||||||||||    
T  41762058 agtcttgattcaataccacaagacttttttataatcacaaagtcttttaaaatcctttaaaatctcaatccaatacacccc 41761978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 53271988 - 53271936
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||| ||||||||||||| ||  |||||||||||||||||||    
T  53271988 agtcttgattgaatatcacaagacttttttattttaaaaaagtcttttaaaat 53271936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 36728052 - 36728123
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaat 357  Q
    |||||||||||||| ||||||||||||||| || ||||| |||||||||||   ||||||| || |||||||    
T  36728052 tcttgattgaatactacaagactttttcataattaaaaaatcttttaaaatctgttagaattataatccaat 36728123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 336
Target Start/End: Original strand, 8584012 - 8584062
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||||||||||  |  ||||||||||||||||||||    
T  8584012 tcttgattgaataccacaagacttttataaaataaaaaagtcttttaaaat 8584062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 338
Target Start/End: Complemental strand, 53594161 - 53594111
Alignment:
Q  288 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattc 338  Q
    |||||||||| |||||||||||||  || ||||||||||||||||||||||    
T  53594161 ttgattgaatgccacaagacttttctataataaaaaagtcttttaaaattc 53594111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 9163128 - 9163058
Alignment:
Q  242 aatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagacttttt 312  Q
    ||||||||||||||| ||||||||       ||||   |||||||||||||||||||||||||||||||||    
T  9163128 aatcttgattgaataccacaagactttttttaaatgacaaagagtcttgattgaataccacaagacttttt 9163058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 41320834 - 41320802
Alignment:
Q  280 aaagagtcttgattgaataccacaagacttttt 312  Q
    |||||||||||||||||||||||||||||||||    
T  41320834 aaagagtcttgattgaataccacaagacttttt 41320802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 360
Target Start/End: Original strand, 56445638 - 56445678
Alignment:
Q  320 aaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  56445638 aaaaagtcttttaaaattccttagaatcttaatccaataca 56445678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 11090363 - 11090296
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatc 347  Q
    ||||| |||||||||||||||||||||| || |||| || ||||| | ||||||||| |||| |||||    
T  11090363 aaagattcttgattgaataccacaagacattctcataattaaaaaatattttaaaatcccttggaatc 11090296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 44775947 - 44775986
Alignment:
Q  320 aaaaagtcttttaaaattccttagaatcatgatccaatac 359  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  44775947 aaaaagtcttttaaaatccattagaatcatgatccaatac 44775986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 339
Target Start/End: Complemental strand, 16653331 - 16653278
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcc 339  Q
    |||||||||||||||||||||||||||  |  | |||| |||||||||||||||    
T  16653331 tcttgattgaataccacaagacttttttttttttaaaatgtcttttaaaattcc 16653278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 55047641 - 55047674
Alignment:
Q  54 agaaatctcatgttttcatgaaagactttttcat 87  Q
    |||||| |||||||||||||||||||||||||||    
T  55047641 agaaatatcatgttttcatgaaagactttttcat 55047674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 5799991 - 5799959
Alignment:
Q  280 aaagagtcttgattgaataccacaagacttttt 312  Q
    ||||||||||||||||||||||||| |||||||    
T  5799991 aaagagtcttgattgaataccacaaaacttttt 5799959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 32684018 - 32684058
Alignment:
Q  56 aaatctcatgttttcatgaaagactttttcatgctaaaatt 96  Q
    ||||||||| |||||||||||||||||||| || |||||||    
T  32684018 aaatctcatcttttcatgaaagactttttcttgttaaaatt 32684058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 40143855 - 40143803
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||||||||||||||  |||||||||| |  | ||||||||||||||||||    
T  40143855 agtcttgattgaatacctaaagacttttttaaaacaaaaaagtcttttaaaat 40143803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 54509793 - 54509741
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||||||||||||||  |||||||||| |  | ||||||||||||||||||    
T  54509793 agtcttgattgaatacctaaagacttttttaaaacaaaaaagtcttttaaaat 54509741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 239; Significance: 1e-132; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 369
Target Start/End: Complemental strand, 24776611 - 24776240
Alignment:
Q  1 agagaagggaggagagag----agatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatt 96  Q
    ||||||||||||||||||    |||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24776611 agagaagggaggagagagggagagatagtaaaatcttaaaagaaaaaa-caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatt 24776513  T
Q  97 tcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgatt 196  Q
    ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||    
T  24776512 tcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgatt 24776413  T
Q  197 aagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaa 296  Q
    |||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||    
T  24776412 aagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattagaaagagtcttgattgaa 24776313  T
Q  297 taccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 369  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  24776312 taccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccccctta 24776240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 12 - 364
Target Start/End: Complemental strand, 16269933 - 16269581
Alignment:
Q  12 gagagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatccc 111  Q
    ||||| ||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  16269933 gagagggagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactataaaatccc 16269834  T
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 211  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  16269833 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 16269734  T
Q  212 atatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttt 311  Q
    ||| ||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||    
T  16269733 ataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagactttt 16269634  T
Q  312 tcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  16269633 tcataataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 16269581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 16 - 364
Target Start/End: Original strand, 31170596 - 31170944
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31170596 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 31170695  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||     
T  31170696 aatccatcaaaatctgatttattaaacaatccttggaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatac 31170795  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    ||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| ||||||||||||||||    
T  31170796 cacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatatcacaagactttttcat 31170895  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31170896 gataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 31170944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 14 - 362
Target Start/End: Original strand, 14198547 - 14198894
Alignment:
Q  14 gagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccac 113  Q
    ||||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  14198547 gagagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccac 14198646  T
Q  114 aaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaat 213  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||    
T  14198647 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactggactttttttaagtgattaagagtcttgattgaat 14198746  T
Q  214 atcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttc 313  Q
    | ||||||||       |||||||||||||| ||||||||||||||||||||       ||||| |||||||||||||||||||||||||||||||||||    
T  14198747 accacaagactttttttaaatgacaaagaattttgattgaataacacaagac-ttttttaaattagaaagagtcttgattgaataccacaagactttttc 14198845  T
Q  314 atgataaaaaagtcttttaaaattccttagaatcatgatccaatacacc 362  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14198846 atgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 14198894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 364
Target Start/End: Complemental strand, 35317319 - 35316952
Alignment:
Q  1 agagaagggaggagagag----agatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatt 96  Q
    ||||||||||||||||||    |||||||||||| |||||||       ||||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  35317319 agagaagggaggagagagtgagagatagtaaaatcttaaaagaaaaaaacaatgttaagaaatcttatgttttcatgaaagactttttcatgctaaaatt 35317220  T
Q  97 tcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgatt 196  Q
    ||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||    
T  35317219 tcactagaaaattccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgatt 35317120  T
Q  197 aagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaa 296  Q
    ||||||||||||||||||| |||||||       |||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||    
T  35317119 aagagtcttgattgaatattacaagactttttttaaatgacaaagaatcttgattgaataacacaaaactttttttaaattggaaagagtcttgattgaa 35317020  T
Q  297 taccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||    
T  35317019 taccacaagactttttcatgataaaaaagttttttaaaatcccttagaatcatgattcaatacacccc 35316952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 16 - 364
Target Start/End: Complemental strand, 12407618 - 12407270
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  12407618 gagagatagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatggtaaaatttcactagaaaatcccacaa 12407519  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||       |||||||||||||||| |||||||||     
T  12407518 aatccatcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccactagactttttttaagtgattaagagtctcgattgaatac 12407419  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    ||||||||       |||||||||||||||||||||||||||||||||||       |||||| ||||| ||||||||||||||||||||||||||||||    
T  12407418 cacaagactttttttaaatgacaaagaatcttgattgaataacacaagacttttttaaaattgaaaagaatcttgattgaataccacaagactttttcat 12407319  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||    
T  12407318 gataaaaaagtcttttaaaatctcttagaatcatgatccaatacacccc 12407270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 44766017 - 44765667
Alignment:
Q  1 agagaagggaggagagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcag 100  Q
    |||||||||||||||||||  |||||||||||||||||       |||||||||||||||||||||||||||||||         ||||||||||||||     
T  44766017 agagaagggaggagagaga--tagtaaaattttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaa---------atgctaaaatttcac 44765929  T
Q  101 tagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaaga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||       ||||||||||||    
T  44765928 tagaaaatcccacaaaatccatcaaaatcttatttattaaacaatctttcgaaatttgaatgattttgaataccactagactttttttaagtgattaaga 44765829  T
Q  201 gtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaatacc 300  Q
    |||| ||||||||| ||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||| |||||||||||||    
T  44765828 gtctcgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagttttgattgaatacc 44765729  T
Q  301 acaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacc 362  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  44765728 acaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 44765667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 16 - 363
Target Start/End: Original strand, 22551735 - 22552082
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  22551735 gagagatagtaaaatcttaaaaggaaaaaacaatcataagaaatctcatgttttcatgaaatactttttcatgctaaaatttcactagaaaatcccacaa 22551834  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||| | ||||| ||||||||| |||||||||||||| |||||||||||||||||||       |||||||||| |||||||||||||||     
T  22551835 aatccatcaaaatttaatttaataaacaatcattcgaaatttgaataattttgaataccactagactttttttaagtgattaaaagtcttgattgaatac 22551934  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    ||||||||       |||||||||||||||||||||||||||||||||||       |||||||||| | ||||||||||||||||||||||||||||||    
T  22551935 cacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaaaaatcttgattgaataccacaagactttttcat 22552034  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22552035 gataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 22552082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 18 - 364
Target Start/End: Original strand, 305439 - 305787
Alignment:
Q  18 gagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaa 117  Q
    ||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||    
T  305439 gagatagtaaaatcttaaaagaaataaacaatcctaagaaatctcatgttttcatgaaagactttttcattctaaaatttcactagaaaatctcacaaaa 305538  T
Q  118 tccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatca 217  Q
    |||||| |||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| ||    
T  305539 tccatcgaaatctgatttattaaacaatcattcaaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatacca 305638  T
Q  218 caagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagac-nnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatg 316  Q
    ||||||       |||||||||| ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  305639 caagacttttttcaaatgacaaataatcttgattgaataacacaagacttttttttaaattggaaagagtcttgattgaataccacaagactttttcatg 305738  T
Q  317 at-aaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    || ||||||||||||||||||  ||||||||||||||||||||||||||    
T  305739 ataaaaaaagtcttttaaaatcgcttagaatcatgatccaatacacccc 305787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 16 - 365
Target Start/End: Complemental strand, 43847884 - 43847535
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||    
T  43847884 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgacagactttttcatgctaaaatttcactagaaaattccacaa 43847785  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||||     
T  43847784 aatccatcaaattctgatttattaaacaatccttcgaaatttgaatgattttgaatacaactagactttttttaagtgattaagagtcttgattgaatac 43847685  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    ||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||| ||| |||||||| | ||||||||||||     
T  43847684 cacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagttttgcttgaatactagaagactttttcac 43847585  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacacccca 365  Q
    ||||||||||||||||||||| |||||||  ||||||| |||||||||||    
T  43847584 gataaaaaagtcttttaaaatcccttagatacatgatctaatacacccca 43847535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 66 - 364
Target Start/End: Complemental strand, 1789630 - 1789332
Alignment:
Q  66 ttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgatt 165  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1789630 ttttgatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgatt 1789531  T
Q  166 ttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagac 265  Q
    ||||||||||||||||       |||||||||||||| |||||||||||||| |||||       |||||||||||||||||||||||||||||||||||    
T  1789530 ttgaataccactagactttttttaagtgattaagagttttgattgaatatcataagactttttttaaatgacaaagaatcttgattgaataacacaagac 1789431  T
Q  266 nnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
           |||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  1789430 tttttttaaattggaaagagttttgattgaataccacaagacttttttatgataaaaaaatcttttaaaatctcttagaatcatgatccaatacacccc 1789332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 16 - 312
Target Start/End: Complemental strand, 20605474 - 20605178
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20605474 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 20605375  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||||||     
T  20605374 aatccatcaaaatctgatttattaaacaatccttcgaaattttaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatac 20605275  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagacttttt 312  Q
    ||||||||       |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||    
T  20605274 cacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagacttttt 20605178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 46 - 359
Target Start/End: Original strand, 5093049 - 5093352
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  5093049 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 5093148  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    ||||| |||||||||||||||||||||| |||||||       ||||||||||| |||||||||||||| ||||||||       |||||||||||||||    
T  5093149 ccttcaaaatttgaatgattttgaatactactagactttttttaagtgattaagcgtcttgattgaataccacaagactttttttaaatgacaaagaatc 5093248  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    ||||||||||||||||||||       ||||||||||||||||||||||||||||||||||  |||||          ||||||||||||| ||||||||    
T  5093249 ttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagatattttc----------agtcttttaaaatcccttagaa 5093338  T
Q  346 tcatgatccaatac 359  Q
    ||||||||||||||    
T  5093339 tcatgatccaatac 5093352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 52 - 352
Target Start/End: Complemental strand, 32125455 - 32125152
Alignment:
Q  52 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcg 151  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32125455 taagaaatctcatattttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 32125356  T
Q  152 aaatttgaatgattttgaataccactagacnnnnnnnaagtg---attaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttg 248  Q
    |||||||||||||||||||||||||| |||       || ||   ||||||||||||||||||||| |||| |||       |||||||||||||| |||    
T  32125355 aaatttgaatgattttgaataccacttgactttttttaaatgatcattaagagtcttgattgaataccacatgactttttttaaatgacaaagaattttg 32125256  T
Q  249 attgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatca 348  Q
    |||||||||||||||||       |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||    
T  32125255 attgaataacacaagactttttttaaattgaaaagagtcttgattgaataccacaagactttttcattataaaaaagtcttttaaaatcccttaaaatca 32125156  T
Q  349 tgat 352  Q
    ||||    
T  32125155 tgat 32125152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 53 - 360
Target Start/End: Complemental strand, 28844756 - 28844449
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||| ||||||||||||||| |  ||||||| || || ||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  28844756 aagaaatctcatctttttatgaaagactttttcttattaaaattacactacaaaattccacaaaatccatcaaaatctaatttattaaacaatccttcga 28844657  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  28844656 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 28844557  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       || ||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  28844556 aataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 28844457  T
Q  353 ccaataca 360  Q
    ||||||||    
T  28844456 ccaataca 28844449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 53 - 369
Target Start/End: Complemental strand, 33135823 - 33135508
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  33135823 aagaaatctcatttttt-atgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 33135725  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  33135724 aatttgaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 33135625  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||| ||       |||||| ||| |||||||||||||||||| ||||||||||||| || ||||||||||||||||| |  ||||||| | ||    
T  33135624 aataccacaatactttttttaaattgcaaaaagtcttgattgaataccataagactttttcataattaaaaagtcttttaaaatcctatagaatcctaat 33135525  T
Q  353 ccaatacaccccactta 369  Q
    |||||||| ||| ||||    
T  33135524 ccaatacatccccctta 33135508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 9120381 - 9120157
Alignment:
Q  1 agagaagggag--gagagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttc 98  Q
    |||||||||||  ||||||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  9120381 agagaagggagcagagagagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagatttttccatactaaaatttc 9120282  T
Q  99 agtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaa 198  Q
    | |||||||||||||||||||||||||||||| ||||||||||||||||||  |||| |||||||||||||||| |||||||        ||||||||||    
T  9120281 actagaaaatcccacaaaatccatcaaaatctaatttattaaacaatcctttaaaatctgaatgattttgaatatcactagattttttttaagtgattaa 9120182  T
Q  199 gagtcttgattgaatatcacaagac 223  Q
    || ||||||||||||| ||||||||    
T  9120181 gaatcttgattgaataacacaagac 9120157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 71 - 369
Target Start/End: Complemental strand, 26788969 - 26788669
Alignment:
Q  71 atgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaa 170  Q
    ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  26788969 atgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaa 26788870  T
Q  171 taccactagac--nnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnn 268  Q
    |||||| ||||          | |||| || ||||||||||||||| | ||||||       |||||||||||| ||||||||||||| ||||||||       
T  26788869 taccacaagactttttttttgaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagacttt 26788770  T
Q  269 nnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactt 368  Q
        |||||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | |||||||||| ||| |||    
T  26788769 ttttaaattgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaatacatccccctt 26788670  T
Q  369 a 369  Q
    |    
T  26788669 a 26788669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 197 - 365
Target Start/End: Complemental strand, 20605209 - 20605041
Alignment:
Q  197 aagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaa 296  Q
    |||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  20605209 aagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaa 20605110  T
Q  297 taccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccca 365  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  20605109 taccacaagactttttcatgattaaaaagtcttttaaaatcccttagaatcatgatccaatacacccca 20605041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 53 - 359
Target Start/End: Original strand, 28740302 - 28740598
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||          ||||||||||||||||||||  |||||||||||||||||||||    
T  28740302 aagaaatctcatctttttatgaaagactttttcttgttaaaattaca----------ccacaaaatccatcaaaatccaatttattaaacaatccttcga 28740391  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  28740392 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 28740491  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       || ||| ||| ||| |||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  28740492 aataccacaagactttttttaagttgcaaaaagttttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 28740591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 53 - 371
Target Start/End: Complemental strand, 10657607 - 10657289
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    ||||||| |||| ||||||||||| |||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  10657607 aagaaatttcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 10657508  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||| ||       ||||||||||| ||||||||||    
T  10657507 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaaaacttttttaaaatgacaaaggatcttgattg 10657408  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       || ||  ||| || ||||||||||||||||| ||||||||||| |  |||||||| |||||||| || |||||||   ||    
T  10657407 aataccacaagactttttttaagtttcaaaaagccttgattgaataccacacgactttttcataactaaaaagtcatttaaaatcccatagaatccaaat 10657308  T
Q  353 ccaatacaccccacttaat 371  Q
    |||||||| ||| ||||||    
T  10657307 ccaatacatcccccttaat 10657289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 114 - 364
Target Start/End: Original strand, 26601270 - 26601520
Alignment:
Q  114 aaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaat 213  Q
    |||||||  |||||||| ||||||||||||| | |||||||||||||||||||||||||||||  |||       |||||||||||||||||||||||||    
T  26601270 aaaatcccacaaaatctgatttattaaacaaacattcgaaatttgaatgattttgaataccacgtgactttttttaagtgattaagagtcttgattgaat 26601369  T
Q  214 atcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttc 313  Q
    |  |||||||        ||||||||||| |||||||| |||||||||| ||       ||||| |||||||| |||||||||||||||||||||||||     
T  26601370 actacaagacttttttttaatgacaaagagtcttgattaaataacacaaaactttttttaaattagaaagagttttgattgaataccacaagacttttta 26601469  T
Q  314 atgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    || |||||||||||||||||||| | |||||| ||||||||||||||||||    
T  26601470 ataataaaaaagtcttttaaaatcctttagaaacatgatccaatacacccc 26601520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 112 - 360
Target Start/End: Complemental strand, 7026746 - 7026497
Alignment:
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 211  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||       || |||| || ||||||||||||    
T  7026746 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattga 7026647  T
Q  212 atatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagac-ttt 310  Q
    ||| | ||||||       |||||||||||| ||||||||||||| ||||||||       |||||| ||| |||||||||||||||||||||||| |||    
T  7026646 atacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaataccacaagactttt 7026547  T
Q  311 ttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    ||||| || |||||||||||||||||  | ||||||| | ||||||||||    
T  7026546 ttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 7026497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 239 - 364
Target Start/End: Complemental strand, 9120183 - 9120058
Alignment:
Q  239 aagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattc 338  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |    
T  9120183 aagaatcttgattgaataacacaagacttttttaaaattggaaagagtcttgattgaataccacatgattttttcatgataaaaaagtcttttaaaatcc 9120084  T
Q  339 cttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||||||||||||||    
T  9120083 cttagaatcatgatccaatacacccc 9120058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 53 - 261
Target Start/End: Complemental strand, 25288360 - 25288152
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||| || || || ||||||| || || ||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  25288360 aagaaatctcatcttttcatgaaagacgttctcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatccttcga 25288261  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| |||        ||||||| || |||||||| |||||| | ||||||       |||||||||||| |||||||||    
T  25288260 aatttgaatgattttgaataccacaagattttttttaagtgatgaaaagtcttgaatgaatacctcaagacttttttaaaatgacaaagagtcttgattg 25288161  T
Q  253 aataacaca 261  Q
    |||| ||||    
T  25288160 aataccaca 25288152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 13833441 - 13833738
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| || ||||||||||||||||| || ||||||| || || ||||||||||||||||||          ||||||||||||||||||| |    
T  13833441 aagaaatctcatcttgtcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcaa 13833530  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||  ||||       ||||||| || ||||||||||||||||  ||||||       |||||| ||| | |||||||||    
T  13833531 aatttgaatgattttgaataccagaagactttttttaagtgatgaaaagtcttgattgaatatatcaagacttttttaaaatgataaaaagtcttgattg 13833630  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       || ||| ||| ||||||||||||||||||||| |||||||||| || ||||  |||||||||||  | ||||||| | ||    
T  13833631 aataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaatactttttcataattaaaatatcttttaaaatctcatagaatcctaat 13833730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 53 - 256
Target Start/End: Complemental strand, 18177468 - 18177265
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||| || |||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||| |||||||||||||||||    
T  18177468 aagaaatctcatctttttattaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattaattaaacaatccttcga 18177369  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| | ||       || |||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  18177368 aatttgaatgattttgaataccacaaaactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 18177269  T
Q  253 aata 256  Q
    ||||    
T  18177268 aata 18177265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 53 - 370
Target Start/End: Complemental strand, 3463863 - 3463555
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || ||          |||||||||||||||||  |||||||||||||||||| ||    
T  3463863 aagaaatctcatattttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatcctttga 3463774  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaat-cttgatt 251  Q
    || |||||||||||| |||||||| ||||       || |||| || ||||||||||||| | | ||||||       |||||||||||| | |||||||    
T  3463773 aaattgaatgattttaaataccacaagactttttttaaatgatgaaaagtcttgattgaacacctcaagacttttttaaaatgacaaagagttcttgatt 3463674  T
Q  252 gaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatga 351  Q
    |||||  | |||||       |||||| ||| ||||||||||||||||||||||| |||||||| || |||||||||||||||||  | ||||||||| |    
T  3463673 gaatattataagactttttttaaattgcaaaaagtcttgattgaataccacaagattttttcataattaaaaagtcttttaaaatctcatagaatcataa 3463574  T
Q  352 tccaatacaccccacttaa 370  Q
    ||||||||| ||| |||||    
T  3463573 tccaatacatcccccttaa 3463555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 346
Target Start/End: Original strand, 10125259 - 10125594
Alignment:
Q  1 agagaagggaggagagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcag 100  Q
    ||||||||||  ||| |||||||||||| |||||||||       ||||| ||||||||||| |||||| ||||||||||||||| || ||||||||||     
T  10125259 agagaagggataagaaagagatagtaaacttttaaaagaaaaa--caatcttaagaaatctcgtgtttttatgaaagactttttcttgttaaaatttcac 10125356  T
Q  101 tagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaaga 200  Q
    || ||||||||||||||| ||          |||||||||||||||||| |||||||||||||||||||||| ||  ||||       ||||||| || |    
T  10125357 taaaaaatcccacaaaattca----------atttattaaacaatcctttgaaatttgaatgattttgaatatcatgagactttttttaagtgatgaaaa 10125446  T
Q  201 gtcttgattgaatatcacaa--gacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaata 298  Q
    || ||||||||||||| |||  |||       |||||||||||| ||||||||||||| ||||| ||       |||||| ||||||||||||||||||     
T  10125447 gttttgattgaatatctcaaaagacttttttaaaatgacaaagagtcttgattgaataccacaaaactttttttaaattgcaaagagtcttgattgaatg 10125546  T
Q  299 ccacaagactttttcatgataaaaaagtcttttaaaattccttagaat 346  Q
     ||| |||||||||||| || ||||| |||||||||||  ||||||||    
T  10125547 tcacgagactttttcataattaaaaaatcttttaaaatctcttagaat 10125594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 123 - 346
Target Start/End: Complemental strand, 3574978 - 3574755
Alignment:
Q  123 caaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaaga 222  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||| ||| ||||       ||||||| || ||||||||||||||| | |||||    
T  3574978 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatatcacaagactttttttaagtgatgaaaagtcttgattgaatacctcaaga 3574879  T
Q  223 cnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaa 322  Q
    |       |||||||||  | ||||||||||||| ||||| ||       || ||| ||| ||||||||||||||||||||| |||||||||| || |||    
T  3574878 cttttttaaaatgacaattagtcttgattgaataccacaaaactttttttaagttgcaaaaagtcttgattgaataccacaaaactttttcataattaaa 3574779  T
Q  323 aagtcttttaaaattccttagaat 346  Q
    ||||||||||||||||| ||||||    
T  3574778 aagtcttttaaaattccatagaat 3574755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 139 - 360
Target Start/End: Original strand, 215320 - 215541
Alignment:
Q  139 aaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgaca 238  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       || |||||    
T  215320 aaacaatcctttgaagtttgaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagactttttaaaattgaca 215419  T
Q  239 aagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattc 338  Q
    |||| ||||||||||||| ||||||||       || ||| ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||      
T  215420 aagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatct 215519  T
Q  339 cttagaatcatgatccaataca 360  Q
    | ||||||| | ||||||||||    
T  215520 catagaatcctaatccaataca 215541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 43078764 - 43078653
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    ||||||||| || |||| |||||||||||||||||| ||||||| || || ||||||||||||||||||| ||||||  ||||||||||||||| |||||    
T  43078764 aagaaatcttatctttttatgaaagactttttcatgttaaaattacactataaaatcccacaaaatccatgaaaatccaatttattaaacaatcattcga 43078665  T
Q  153 aatttgaatgat 164  Q
    ||||||||||||    
T  43078664 aatttgaatgat 43078653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 246 - 371
Target Start/End: Complemental strand, 378987 - 378862
Alignment:
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    ||||||||||| ||||||||       || ||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||    
T  378987 ttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccttataa 378888  T
Q  346 tcatgatccaatacaccccacttaat 371  Q
    ||||||||||||||| ||| ||||||    
T  378887 tcatgatccaatacatcccccttaat 378862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 274 - 364
Target Start/End: Complemental strand, 19145004 - 19144914
Alignment:
Q  274 aattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||| || |||| ||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||||||||||  |||||||||||||    
T  19145004 aattgaaatgagttttgattgaataccacaagacttttttatgataaaaaaatattttaaaatcccttagaatcatattccaatacacccc 19144914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 43078643 - 43078569
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  43078643 tcttgattgaataccacaagactttttcataatcaaaaagtcttttaaaatcccatagaatcctaatccaataca 43078569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 123 - 337
Target Start/End: Original strand, 6224626 - 6224841
Alignment:
Q  123 caaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaatatcacaag 221  Q
    |||||||  |||||||||| ||||||||||||||||||| |||||||||||||| ||||        ||||||| || | ||||||||||||| | ||||    
T  6224626 caaaatccaatttattaaataatccttcgaaatttgaataattttgaataccacaagactttttttaaagtgatgaaaaatcttgattgaatacctcaag 6224725  T
Q  222 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaa 321  Q
    ||       |||||||||||| |||||||| |||| |||| |||       || ||| ||| | |||||||| |||||||||| |||||||||| || ||    
T  6224726 acttttttaaaatgacaaagagtcttgattaaataccacatgactttttttaatttgcaaaaaatcttgattcaataccacaaaactttttcataattaa 6224825  T
Q  322 aaagtcttttaaaatt 337  Q
    ||||  ||||||||||    
T  6224826 aaagctttttaaaatt 6224841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 379079 - 379016
Alignment:
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatacca 175  Q
    |||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||||||    
T  379079 acaaaatctatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaatacca 379016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 363
Target Start/End: Original strand, 18176474 - 18176553
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    ||||||||||||||||||||||| ||||| || || ||||| ||||||||||| ||||  |||| | || ||||||||||    
T  18176474 agtcttgattgaataccacaagatttttttattattaaaaaatcttttaaaatcccttcaaatcttaattcaatacaccc 18176553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 2288538 - 2288483
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||||||| ||||||||  || |||||||||||||||||||| ||||    
T  2288538 agtcttgattgaataccactagactttt--ataataaaaaagtcttttaaaatccctt 2288483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 362
Target Start/End: Original strand, 3858191 - 3858269
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacc 362  Q
    |||||||||||||||||| || | ||||| || || ||||||||||||||||| ||||| |||| | || |||||||||    
T  3858191 agtcttgattgaataccaaaaaagttttttatcattaaaaagtcttttaaaatcccttaaaatcttaattcaatacacc 3858269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 360
Target Start/End: Complemental strand, 43825147 - 43825085
Alignment:
Q  298 accacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||||||||||||||||| || ||||| |||||||||||  | ||||||||| ||||||||||    
T  43825147 accacaagactttttcataattaaaaaatcttttaaaatctcatagaatcataatccaataca 43825085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 21370638 - 21370687
Alignment:
Q  132 atttattaaacaatccttcgaaatttgaatgattttgaataccactagac 181  Q
    |||||| ||||||| |||| ||||||||||||||||||||||||| ||||    
T  21370638 atttatcaaacaatacttcaaaatttgaatgattttgaataccacaagac 21370687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 21987366 - 21987318
Alignment:
Q  288 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||||||||| |||  |||||||||| ||||||||||||||||||||    
T  21987366 ttgattgaatactacataactttttcatcataaaaaagtcttttaaaat 21987318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 338
Target Start/End: Complemental strand, 45547008 - 45546956
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattc 338  Q
    ||||||||||||||||||||||||||  |  | ||||||||||||||||||||    
T  45547008 tcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaattc 45546956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 6224576 - 6224619
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatt 96  Q
    |||||||||||| |||||||||||||||||||| || |||||||    
T  6224576 aagaaatctcatcttttcatgaaagactttttcttgttaaaatt 6224619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 26601183 - 26601285
Alignment:
Q  14 gagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccac 113  Q
    ||||||||||||||||| |||||||       ||||||||| |||||| |||||||||| ||| ||||||  ||| |||| ||||| |||||||||||||    
T  26601183 gagagagatagtaaaatcttaaaagaaaaaa-caatcctaaaaaatct-atgttttcatcaaaaactttta-atgttaaagtttcactagaaaatcccac 26601279  T
Q  114 aaaatc 119  Q
    ||||||    
T  26601280 aaaatc 26601285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 24193626 - 24193576
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||| ||||||||||| |  | ||||||||||||||||||    
T  24193626 tcttgattgaataccccaagacttttttaaaacaaaaaagtcttttaaaat 24193576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 29941022 - 29940972
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||||||||||  |  | ||||||||||||||||||    
T  29941022 tcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaat 29940972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 8172112 - 8172055
Alignment:
Q  279 gaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||| |||||||||||  |||||| | |||||||| |||||||| |||||||||||    
T  8172112 gaaagaatcttgattgaaagccacaaaattttttcataataaaaaaatcttttaaaat 8172055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 11534914 - 11534862
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||||||||||||||  |||||||||| |  | ||||||||||||||||||    
T  11534914 agtcttgattgaatacctaaagacttttttaaaacaaaaaagtcttttaaaat 11534862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 34028938 - 34028990
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||||||||||||||  |||||||||| |  | ||||||||||||||||||    
T  34028938 agtcttgattgaatacctaaagacttttttaaaacaaaaaagtcttttaaaat 34028990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 237; Significance: 1e-131; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 16 - 364
Target Start/End: Original strand, 6197447 - 6197795
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6197447 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 6197546  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||     
T  6197547 aatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatac 6197646  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    ||||||||       |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||||||||||    
T  6197647 cacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacacgactttttcat 6197746  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  6197747 gataaaaaagttttttaaaatcccttagaatcatgatccaatacacccc 6197795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 364
Target Start/End: Original strand, 2300691 - 2301055
Alignment:
Q  1 agagaagggaggagagagaga--tagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttc 98  Q
    |||||||||||||||||||||  |||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2300691 agagaagggaggagagagagagatagtaaaattttaaaagaaaaaaa-aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttc 2300789  T
Q  99 agtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaa 198  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||       ||||||| ||    
T  2300790 actagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttcaataccagtagactttttttaagtgatcaa 2300889  T
Q  199 gagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaata 298  Q
    |||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||       |||||| |||||||||||||||||||    
T  2300890 gagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaata 2300989  T
Q  299 ccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2300990 ccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 2301055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 46 - 363
Target Start/End: Complemental strand, 1391830 - 1391513
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  1391830 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 1391731  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    ||||| ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| ||||||||       ||||||||| |||||    
T  1391730 ccttccaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttatttaaatgacaatgaatc 1391631  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    ||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||    
T  1391630 ttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcatttaaaatcctttagaa 1391531  T
Q  346 tcatgatccaatacaccc 363  Q
    ||||||||||||||||||    
T  1391530 tcatgatccaatacaccc 1391513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 46 - 369
Target Start/End: Complemental strand, 29076805 - 29076480
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||||||| |||||||||||||| |||||||| |||||||||||||||||||| |||||||||| | ||||||||||||||||| ||||||||||||||    
T  29076805 caatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaaacaat 29076706  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnn-aagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaat 244  Q
    |||||||||||||||||||||||||||| |||||||        |||||||||||| ||| ||||||||| ||||||||       ||||||||||||||    
T  29076705 ccttcgaaatttgaatgattttgaatactactagacttttttttaagtgattaagaatctagattgaataccacaagactttttttaaatgacaaagaat 29076606  T
Q  245 cttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataa-aaaagtcttttaaaattccttag 343  Q
    |||||||||||||||||||||       |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |||||    
T  29076605 cttgattgaataacacaagactttatttaaattggaaagagtcttgattgaatatcacaagactttttcatgataaaaaaagtcttttaaaatctcttag 29076506  T
Q  344 aatcatgatccaatacaccccactta 369  Q
    ||||||||||||||||||||| ||||    
T  29076505 aatcatgatccaatacacccccctta 29076480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 46 - 369
Target Start/End: Complemental strand, 29111779 - 29111453
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||||||| |||||||||||||| |||||||| |||||||||||||||||||| |||||||||| | ||||||||||||||||| ||||||||||||||    
T  29111779 caatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaaacaat 29111680  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnn--aagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaa 243  Q
    |||||||||||||||||||||||||||| |||||||         |||||||||||| ||| ||||||||| ||||||||       |||||||||||||    
T  29111679 ccttcgaaatttgaatgattttgaatactactagactttttttttaagtgattaagaatctagattgaataccacaagactttttttaaatgacaaagaa 29111580  T
Q  244 tcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataa-aaaagtcttttaaaattcctta 342  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  ||||    
T  29111579 tcttgattgaataacacaagactttatttaaattggaaagagtcttgattgaatatcacaagactttttcatgataaaaaaagtcttttaaaatctctta 29111480  T
Q  343 gaatcatgatccaatacaccccactta 369  Q
    |||||||||||||||||||||| ||||    
T  29111479 gaatcatgatccaatacacccccctta 29111453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 16 - 336
Target Start/End: Complemental strand, 28002901 - 28002581
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       ||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||||  |||||    
T  28002901 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaagcttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatttcacaa 28002802  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||||     
T  28002801 aatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaatac 28002702  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    || |||||       |||||||||| |||||||||||||||| |||||||       ||||||||||||||||||||||||||| |||||| ||||||||    
T  28002701 cagaagactttttttaaatgacaaaaaatcttgattgaataagacaagactttttttaaattggaaagagtcttgattgaatacgacaagattttttcat 28002602  T
Q  316 gataaaaaagtcttttaaaat 336  Q
     ||||||||||||||||||||    
T  28002601 tataaaaaagtcttttaaaat 28002581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 53 - 360
Target Start/End: Complemental strand, 31895895 - 31895588
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  31895895 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactagaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 31895796  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || |||||||||||||||   ||||||       |||||||||||| |||||||||    
T  31895795 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacttcaagacttttttaaaatgacaaagagtcttgattg 31895696  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       |||||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  31895695 aataccacaagactttttttaaattgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 31895596  T
Q  353 ccaataca 360  Q
    ||||||||    
T  31895595 ccaataca 31895588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 46 - 364
Target Start/End: Complemental strand, 7052051 - 7051733
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||| ||||||||||||||| ||| |||||| |||||||||||||||||||| | |||||||||| ||||||||||||||||||  ||||||||||||||    
T  7052051 caattctaagaaatctcatgattttatgaaaaactttttcatgctaaaattttactagaaaatcctacaaaatccatcaaaatccaatttattaaacaat 7051952  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    ||||||||||||||||||||||||||| |||  |||       ||||||| |||||||||||||| ||| ||||||||       |||||||||||||||    
T  7051951 ccttcgaaatttgaatgattttgaatatcacacgactttttttaagtgatgaagagtcttgattgtataccacaagactttttttaaatgacaaagaatc 7051852  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    ||||| | ||| ||||||||       || ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||    
T  7051851 ttgatcgtataccacaagactttttttaagttgcaaagagtcttgattgaatatcacaagactttttcatgataaaaaagtcttttaaaatctcttagaa 7051752  T
Q  346 tcatgatccaatacacccc 364  Q
    || | ||| || |||||||    
T  7051751 tcctaatcaaacacacccc 7051733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 53 - 360
Target Start/End: Complemental strand, 34773608 - 34773301
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || |  ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  34773608 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactgcaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 34773509  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| |||        || |||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  34773508 aatttgaatgattttgaataccacaagattttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 34773409  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       |||||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| || || |||| | ||    
T  34773408 aataccacaagactttttttaaattgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatataatcctaat 34773309  T
Q  353 ccaataca 360  Q
    ||||||||    
T  34773308 ccaataca 34773301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 53 - 374
Target Start/End: Original strand, 14262439 - 14262760
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||| ||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  14262439 aagaaatcccatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 14262538  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    ||||| |||||||||||||||||| ||||       || |||| || | ||||||||||||| | ||||||       |||||||||||| |||||||||    
T  14262539 aatttaaatgattttgaataccacaagactttttttaaatgatgaaaaatcttgattgaatacctcaagactttttaaaaatgacaaagagtcttgattg 14262638  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       || ||| ||| | ||||||||||||||||||||| |||||||| || ||||||||||||||||| || ||||||| | ||    
T  14262639 aataccacaagactttttttaagttgcaaaaaatcttgattgaataccacaagattttttcataattaaaaagtcttttaaaatcccgtagaatcctaat 14262738  T
Q  353 ccaatacaccccacttaatcat 374  Q
    |||||||| ||| |||| ||||    
T  14262739 ccaatacatcccccttagtcat 14262760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 53 - 265
Target Start/End: Original strand, 34759056 - 34759269
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  34759056 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttgga 34759155  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagac-nnnnnnnaaatgacaaagaatcttgatt 251  Q
    |||||||||||||||||||||||| ||||       ||||||| || |||||||||||||||   ||||||        |||||||||||| ||||||||    
T  34759156 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacttcaagactttttttaaaatgacaaagagtcttgatt 34759255  T
Q  252 gaataacacaagac 265  Q
    ||||| ||||||||    
T  34759256 gaataccacaagac 34759269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 53 - 223
Target Start/End: Complemental strand, 7497274 - 7497105
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||| ||||||||||||||||||  |||||||||||| ||||||||    
T  7497274 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc-acaaaatccatcaaaatccaatttattaaacactccttcga 7497176  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagac 223  Q
    |||||||||||||||||||||||| ||||       ||||||| || | ||||||||||||| ||||||||    
T  7497175 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaaatcttgattgaataccacaagac 7497105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 53 - 265
Target Start/End: Original strand, 30385075 - 30385275
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| ||||||||||||||||| |  || ||||||| || || ||||||||||||||||||          |||||||||||||||||||||    
T  30385075 aagaaatctcatcttttcatgaaagactttgt--tgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcga 30385162  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||||||| || | | ||||||||||| | ||| ||       |||||||||||| |||||||||    
T  30385163 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaatttttgattgaatacctcaatacttttttaaaatgacaaagagtcttgattg 30385262  T
Q  253 aataacacaagac 265  Q
    |||| ||||||||    
T  30385263 aataccacaagac 30385275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 31067682 - 31067569
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||          |||||||||||||||||||||    
T  31067682 aagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcga 31067593  T
Q  153 aatttgaatgattttgaataccac 176  Q
    ||||||||||||||||||||||||    
T  31067592 aatttgaatgattttgaataccac 31067569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 152 - 336
Target Start/End: Complemental strand, 657065 - 656880
Alignment:
Q  152 aaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgatt 251  Q
    ||||||||||||||| ||||||||||||||       |||||||||||||||||||||||||| ||||||||       ||||| |||||||||||||||    
T  657065 aaatttgaatgatttagaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatg-caaagaatcttgatt 656967  T
Q  252 gaataacaca-agacnnnnnnnaaattggaaagagtcttgattgaataccacaaga-ctttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||            |||||| ||||||| |||||||||||||| ||||  ||||| |||||||||||||||||||||||    
T  656966 gaataacacattttttttttttaaattgaaaagagtattgattgaataccataagattttttttatgataaaaaagtcttttaaaat 656880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 53 - 161
Target Start/End: Original strand, 4200443 - 4200541
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || ||          |||||||||||||||||  |||||||||||||||||||||    
T  4200443 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatccttcga 4200532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 5957205 - 5957148
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||||||| ||||||||| || |||||||||||||||||||| ||||    
T  5957205 agtcttgattgaataccactagacttttttattataaaaaagtcttttaaaatccctt 5957148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 7100243 - 7100186
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||| ||||    
T  7100243 agtcttgattgaataccactagactttttcattctaaaaaagtcttttaaaatccctt 7100186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 8794387 - 8794444
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||| ||||    
T  8794387 agtcttgattgaataccactagactttttcattctaaaaaagtcttttaaaatccctt 8794444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 3848185 - 3848092
Alignment:
Q  231 aaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaa 324  Q
    |||||||||| ||| ||||||||||| ||||||||       || ||| ||||| ||||||||||||||||| ||||||||||||| |||||||    
T  3848185 aaatgacaaaaaatattgattgaataccacaagactttttttaagttgcaaagaatcttgattgaataccaccagactttttcatgttaaaaaa 3848092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 708990 - 708937
Alignment:
Q  288 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||||||| ||||    
T  708990 ttgattgaataccactagattttttcattataaaaaagtcttttaaaatccctt 708937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 2238717 - 2238668
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaat 95  Q
    ||||| ||||||||||||||||||||||||||| |||||||| |||||||    
T  2238717 caatcttaagaaatctcatgttttcatgaaagattttttcatactaaaat 2238668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 11113733 - 11113773
Alignment:
Q  47 aatcctaagaaatctcatgttttcatgaaagactttttcat 87  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  11113733 aatcctaagaaatctcatgttttcatgaaagacgttttcat 11113773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 31609697 - 31609749
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||||||| ||||| || || |||||||||||||||||    
T  31609697 agtcttgattgaataccacaagatttttttataattaaaaagtcttttaaaat 31609749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 364
Target Start/End: Original strand, 34759242 - 34759328
Alignment:
Q  280 aaagagtcttgattgaataccacaagac-tttttcatgat-aaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||||||||||||||||||||| ||||| | | |  |||||||||||||||||  | ||||||| | ||||||||||||||    
T  34759242 aaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttttaaaatctcatagaatcctaatccaatacacccc 34759328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 242 - 336
Target Start/End: Complemental strand, 7497128 - 7497034
Alignment:
Q  242 aatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||| ||||||||       || ||| ||  |||||||||||||||||| || |||||||||| || ||||| |||||||||||    
T  7497128 aatcttgattgaataccacaagactttttttaagttgcaacaagtcttgattgaataccagaatactttttcataattaaaaaatcttttaaaat 7497034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 3848330 - 3848286
Alignment:
Q  132 atttattaaacaatccttcgaaatttgaatgattttgaataccac 176  Q
    ||||||||||||||| ||| |||||| ||||||||||||||||||    
T  3848330 atttattaaacaatcattcaaaatttaaatgattttgaataccac 3848286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 8636699 - 8636751
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||| |||||||||  ||||||||||| ||| ||||||||||||||||    
T  8636699 agtcttgatcgaataccacgtgactttttcatcatagaaaagtcttttaaaat 8636751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 30385248 - 30385280
Alignment:
Q  280 aaagagtcttgattgaataccacaagacttttt 312  Q
    |||||||||||||||||||||||||||||||||    
T  30385248 aaagagtcttgattgaataccacaagacttttt 30385280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 10644019 - 10644071
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||||||||||||||  |||||||||| |  | ||||||||||||||||||    
T  10644019 agtcttgattgaatacctaaagacttttttaaaacaaaaaagtcttttaaaat 10644071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 30877931 - 30877879
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||||||||||||||  |||||||||| |  | ||||||||||||||||||    
T  30877931 agtcttgattgaatacctaaagacttttttaaaacaaaaaagtcttttaaaat 30877879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 237; Significance: 1e-131; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 46 - 373
Target Start/End: Complemental strand, 21147274 - 21146947
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  21147274 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 21147175  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| ||||||||       |||||||||||||||    
T  21147174 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 21147075  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    ||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  21147074 ttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacacgactttttcatgataaaaaagtcttttaaaatcccttagaa 21146975  T
Q  346 tcatgatccaatacaccccacttaatca 373  Q
    ||||||||||||||||||| || |||||    
T  21146974 tcatgatccaatacacccccctaaatca 21146947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 12 - 363
Target Start/End: Original strand, 33656007 - 33656359
Alignment:
Q  12 gagagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatccc 111  Q
    ||||||||||||||||||| |||||||       ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  33656007 gagagagagatagtaaaatcttaaaagaaaaaa-caatcctaagaaatctcatattttcatgaaagactttttcatgctaaaatttcactagaaaatccc 33656105  T
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 211  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||||    
T  33656106 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccattagattttttttaagtgattaagagtcttgattga 33656205  T
Q  212 atatcacaagacnnnnnnnaaatgac--aaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactt 309  Q
    ||| ||||||||       |||||||  ||||||||||||||||||||||||||||       |||||| ||||||||||||||||||||||||||||||    
T  33656206 ataccacaagactttttttaaatgacaaaaagaatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccacaagactt 33656305  T
Q  310 tttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  33656306 tttcatgataaaaaaatcttttaaaatcccttaaaatcatgatccaatacaccc 33656359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 15 - 363
Target Start/End: Original strand, 27458918 - 27459265
Alignment:
Q  15 agagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccaca 114  Q
    |||||||||||||||| |||||||       |||||||||||||| ||||||||||||||| || |||||||||||||||||||| ||||||||||||||    
T  27458918 agagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatatcatgttttcatgaatgattttttcatgctaaaatttcactagaaaatcccaca 27459017  T
Q  115 aaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaata 214  Q
    |||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||    
T  27459018 aaatccatcaaaatctaatttattaaacaatccttcaaaatctgaatgattttgaataccactagac-ttttttaagtgattaagagtcttgattgaata 27459116  T
Q  215 tcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttca 314  Q
      |||||||       ||||||||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||| || |||||||||||    
T  27459117 ctacaagactttttttaaatgacaaagaatcttaattgaataacacaagactttttttaaattggaaagagtcttgattgaatactacgagactttttca 27459216  T
Q  315 tgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    |||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  27459217 tgataaaaaagttttttaaaatccgttagaatcatgatccaatacaccc 27459265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 16 - 364
Target Start/End: Original strand, 32157863 - 32158216
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagact---ttttcatgctaaaatttcagtagaaaatccca 112  Q
    ||||||||||||||| |||||||       ||||  |||||||||||||||||||||||||||||   ||||| ||||||||||| | ||||||||||||    
T  32157863 gagagatagtaaaatcttaaaagaaaagaacaattttaagaaatctcatgttttcatgaaagactattttttcgtgctaaaattttactagaaaatccca 32157962  T
Q  113 caaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattga 211  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||| | |||||||||||    
T  32157963 caaaatccgtcaaaatctaatttattaaacaatccttcgaaatttgaatgattttgaataccactagacttttttttaagtgattaggggtcttgattga 32158062  T
Q  212 atatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagac-nnnnnnnaaattggaaagagtcttgattgaataccacaagacttt 310  Q
    ||| ||||||||       |||||||||||||||||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||||    
T  32158063 ataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagacttttttttaaattgaaaagagtcttgattgaataccacaagacttt 32158162  T
Q  311 ttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  32158163 ttcatgataaaaaagtcttttaaaattccttagaatcatgattcaatatacccc 32158216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 52 - 335
Target Start/End: Complemental strand, 139474 - 139191
Alignment:
Q  52 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcg 151  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||| | |||||||| |||||||||||||||||||  |||||||||||||||||||    
T  139474 taagaaatctcatgtttttatgaaagactttttcatattaaaatttcactggaaaatccaacaaaatccatcaaaatctggtttattaaacaatccttcg 139375  T
Q  152 aaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgatt 251  Q
    ||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||| |||| |||       |||||||||||||||||||||    
T  139374 aaatttgaatgattttgaataccactagactttttttaagtgattaaaagtcttgattgaataccacatgactttttttaaatgacaaagaatcttgatt 139275  T
Q  252 gaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaa 335  Q
    ||||||||||| ||       |||||| |||||||||||||||||||| | ||||||||||||| |||||||||||||||||||    
T  139274 gaataacacaaaactttttttaaattgaaaagagtcttgattgaatactaaaagactttttcattataaaaaagtcttttaaaa 139191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 80 - 363
Target Start/End: Complemental strand, 6460965 - 6460682
Alignment:
Q  80 tttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactag 179  Q
    ||||||||| |||||||||| ||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6460965 tttttcatgataaaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaaaccttcgaaatttgaatgattttgaataccactag 6460866  T
Q  180 acnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattgg 279  Q
    |        || |||||||||||||||||||||||  ||| |||       ||||||||||||||||||||||||||||| |||||       || ||||    
T  6460865 attttttttaaatgattaagagtcttgattgaatacgacatgactttttttaaatgacaaagaatcttgattgaataacataagactttttttaagttgg 6460766  T
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||| ||||||||||    
T  6460765 aaagagtcttgattgaataccacaagactttttcattataaaaaaatcttttaaaatcccttagaatcatgattcaatacaccc 6460682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 16 - 312
Target Start/End: Original strand, 5272888 - 5273184
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    |||||||||||||||||||||||       |||   |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  5272888 gagagatagtaaaattttaaaagtaaaaaacaaaattaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 5272987  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||       || |||||||||||||||||||||||     
T  5272988 aatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaatac 5273087  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagacttttt 312  Q
    || |||||       |||||||||||||||||||||||||| ||||||||       ||||   ||| | ||||||||||||| |||||||||||||    
T  5273088 cataagactttttttaaatgacaaagaatcttgattgaatagcacaagactttttttaaatgacaaaaaatcttgattgaataacacaagacttttt 5273184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 14000111 - 14000418
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||||||| |    
T  14000111 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 14000210  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  14000211 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagactttttaaaaatgacaaagagtcttgattg 14000310  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| |||||||        |||||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  14000311 aataccacaagattttttttaaattgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 14000410  T
Q  353 ccaataca 360  Q
    ||||||||    
T  14000411 ccaataca 14000418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 16 - 265
Target Start/End: Original strand, 7016708 - 7016957
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  7016708 gagagatagtaaaatcttaaaagaaaaaaacaattctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 7016807  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||     
T  7016808 aatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatac 7016907  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagac 265  Q
     |||||||       ||||   ||||| ||||||||||||| ||||||||    
T  7016908 tacaagactttttttaaattgaaaagagtcttgattgaataccacaagac 7016957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 56 - 360
Target Start/End: Original strand, 4550266 - 4550570
Alignment:
Q  56 aaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaat 155  Q
    ||||||||| ||||||||||||||| |||| || ||||||| || || ||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  4550266 aaatctcatcttttcatgaaagactctttcttgttaaaattacactacaaaattccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 4550365  T
Q  156 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaat 255  Q
    ||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | |||| |       |||||||||||| ||||||||||||    
T  4550366 ttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagcctttgttaaaatgacaaagagtcttgattgaat 4550465  T
Q  256 aacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatcca 355  Q
    | ||||||||       || ||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | |||||    
T  4550466 accacaagactttttttaagttgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatcca 4550565  T
Q  356 ataca 360  Q
    |||||    
T  4550566 ataca 4550570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 46 - 360
Target Start/End: Original strand, 1152102 - 1152416
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||| ||||||||||||| ||||||| |||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||    
T  1152102 caatcttaagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaat 1152201  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    || |||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       |||||||||||| ||    
T  1152202 ccctcgaaatttgaatgattttgaataccacaagactttttttaagtgataaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtc 1152301  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    ||||||||||| ||||||||       || ||| ||| | |||||||| |||||||||||| |||||||| || |||||||||||||||||  | |||||    
T  1152302 ttgattgaataccacaagactttttttaagttgcaaaaaatcttgattaaataccacaagattttttcataattaaaaagtcttttaaaatctcatagaa 1152401  T
Q  346 tcatgatccaataca 360  Q
    || | ||||||||||    
T  1152402 tcctaatccaataca 1152416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 849334 - 849177
Alignment:
Q  66 ttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgatt 165  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  849334 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatctatcaaaatctgatttattaaacaatccttcgaaatttgaatgatt 849235  T
Q  166 ttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagac 223  Q
    |||||||||| |||||       |||||||||||||||||||||||||| ||||||||    
T  849234 ttgaataccattagactttttttaagtgattaagagtcttgattgaataccacaagac 849177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 53 - 336
Target Start/End: Complemental strand, 13926131 - 13925848
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    ||||||| |||| ||||| |||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  13926131 aagaaatatcatcttttcttgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 13926032  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       |||| || || | ||||||||||||| | ||||||       |||||||||||| |||||||||    
T  13926031 aatttgaatgattttgaataccacaagactttttttaagtaatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 13925932  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||| ||||| ||       || ||| ||| |||||||||| ||||||||||||||||||||| || ||||| |||||||||||    
T  13925931 aataccacaaaactttttttaagttgcaaaaagtcttgattaaataccacaagactttttcataattaaaaaatcttttaaaat 13925848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 46 - 361
Target Start/End: Complemental strand, 9689864 - 9689553
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||| |||||||||| ||||||| |||||||||||||||||  |||||||| |  |||||||| |||| ||||||||||||||| |||||| |||||||    
T  9689864 caatcataagaaatcttatgtttttatgaaagactttttcataataaaattttacaagaaaatctcacacaatccatcaaaatctaatttatcaaacaat 9689765  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    | |||||||||| ||||||||| |||||||| ||||       ||||||| |||||||||||||||||| ||| |          ||||||| |||| ||    
T  9689764 cattcgaaattt-aatgattttaaataccacaagactttttttaagtgatgaagagtcttgattgaataccacga-tgtttttttaaatgac-aagagtc 9689668  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    ||||||||||| || | |||       || |||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||| ||||||||    
T  9689667 ttgattgaataccagacgacttcttttaagttggaaagagtcttgattgaataccacaagactttttcataat-aaaaagtctattaaaatcccttagaa 9689569  T
Q  346 tcatgatccaatacac 361  Q
    |||| |||||||||||    
T  9689568 tcataatccaatacac 9689553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 112 - 360
Target Start/End: Original strand, 4240517 - 4240765
Alignment:
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 211  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  4240517 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 4240616  T
Q  212 atatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttt 311  Q
    ||| | ||||||       |||||||||||| ||||||||||||| |||||||        || ||| ||| ||||||||||||||||||||| ||||||    
T  4240617 atacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagattttttttaagttgcaaaaagtcttgattgaataccacaaaactttt 4240716  T
Q  312 tcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||| || |||||||||||||||||  | ||||||| | ||||||||||    
T  4240717 tcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 4240765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 46 - 360
Target Start/End: Complemental strand, 22746496 - 22746190
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||| |||||||||| || ||||||||||||| |||||| || ||||||| ||        |||||||||||||||||||||   ||||||||||||||    
T  22746496 caatcttaagaaatcttatcttttcatgaaagagtttttcttgttaaaattaca--------tcccacaaaatccatcaaaattcaatttattaaacaat 22746405  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    | ||||||||||||||||||||||||| ||| ||||       ||||||| || ||| ||||||||||| | ||||||       |||||||||||| |     
T  22746404 cattcgaaatttgaatgattttgaatatcacaagactttttttaagtgatgaaaagttttgattgaatacctcaagacttttttaaaatgacaaagagtt 22746305  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    ||||||||||| ||||||||       || ||| ||| |||||| || |||||||||||||||||||||| || |||||||||||||||||||  |||||    
T  22746304 ttgattgaataccacaagactttttttaagttgcaaaaagtcttaatcgaataccacaagactttttcataattaaaaagtcttttaaaattctatagaa 22746205  T
Q  346 tcatgatccaataca 360  Q
    || | ||||||||||    
T  22746204 tcctaatccaataca 22746190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 123 - 360
Target Start/End: Complemental strand, 37014044 - 37013807
Alignment:
Q  123 caaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaaga 222  Q
    |||||||  ||||||||||||| ||||||||||||||||||||||||||||| | ||||       ||||||| || ||||||||||||||| | |||||    
T  37014044 caaaatccaatttattaaacaacccttcgaaatttgaatgattttgaataccgcaagactttttttaagtgatgaaaagtcttgattgaatacctcaaga 37013945  T
Q  223 cnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaa 322  Q
    |       |||||||||||| ||||||||||||| ||||||||       || ||| ||| |||||||||||||||||||||||||||||||| || |||    
T  37013944 ctttttaaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagactttttcataattaaa 37013845  T
Q  323 aagtcttttaaaattccttagaatcatgatccaataca 360  Q
    ||||||||||||||  | ||||||||| ||||||||||    
T  37013844 aagtcttttaaaatctcatagaatcataatccaataca 37013807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 86 - 322
Target Start/End: Original strand, 14465266 - 14465501
Alignment:
Q  86 atgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnn 185  Q
    |||||||||| | | |||||||| ||||||||| ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| ||||        
T  14465266 atgctaaaatattactagaaaattccacaaaattcatcaaaatccgatttattaaacaatctttcgaaatttgaatgattttgaataccacaagactttt 14465365  T
Q  186 nnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagag 285  Q
       ||| ||| |||||||||||||||||| || || ||       |||||||||||| |||||||||||| || | ||||       |||||||||||||    
T  14465366 tttaagcgatgaagagtcttgattgaataccagaaaactttttttaaatgacaaagagtcttgattgaat-accccagactttttttaaattggaaagag 14465464  T
Q  286 tcttgattgaataccacaagactttttcatgataaaa 322  Q
    | || ||||||||||||||||||||||||||||||||    
T  14465465 ttttaattgaataccacaagactttttcatgataaaa 14465501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 197 - 361
Target Start/End: Original strand, 5273111 - 5273276
Alignment:
Q  197 aagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaa 296  Q
    |||| ||||||||||||| ||||||||       |||||||||| ||||||||||||||||||||||||       |||||||||||| |||||||||||    
T  5273111 aagaatcttgattgaatagcacaagactttttttaaatgacaaaaaatcttgattgaataacacaagactttttttaaattggaaagaatcttgattgaa 5273210  T
Q  297 taccacaagactttt-tcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacac 361  Q
    |||||||||| |||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  5273211 taccacaagatttttttcatgataaaaaagtcttttaaaatcccttaaaatcatgatccaatacac 5273276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 53 - 253
Target Start/End: Original strand, 7947579 - 7947779
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||| | |||||||||||||||||||| || ||||||| || || ||||| ||||||||||||||||||||  |||||||||||||||||||||    
T  7947579 aagaaatctcttcttttcatgaaagactttttcttgttaaaattacactacaaaattccacaaaatccatcaaaatccaatttattaaacaatccttcga 7947678  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||| | | ||||       ||||||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  7947679 aatttgaatgattttgaatatcgcaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 7947778  T
Q  253 a 253  Q
    |    
T  7947779 a 7947779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 53 - 371
Target Start/End: Complemental strand, 5949298 - 5948991
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || ||          |||||||||||||||||  |||||||||||||||||||||    
T  5949298 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatccttcga 5949209  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| |||        ||||||| || | | ||||||||||| | ||||||       |||||||||||| |||||||||    
T  5949208 aatttgaatgattttgaataccacaaga-tttttttaagtgatgaaaaattttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 5949110  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       || ||| ||| ||| ||||||||||||||||| | |||||||| || |||| |||||||||||| || ||||||| | ||    
T  5949109 aataccacaagactttttttaagttgcaaaaagttttgattgaataccacaaaaatttttcataattaaaaggtcttttaaaatcccatagaatcctaat 5949010  T
Q  353 ccaatacaccccacttaat 371  Q
    |||| ||| ||| ||||||    
T  5949009 ccaacacatcccccttaat 5948991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 239 - 364
Target Start/End: Original strand, 7016889 - 7017014
Alignment:
Q  239 aagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattc 338  Q
    |||| |||||||||||||  |||||||       |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  7016889 aagagtcttgattgaatactacaagactttttttaaattgaaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcc 7016988  T
Q  339 cttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||||||||||||||    
T  7016989 cttagaatcatgatccaatacacccc 7017014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 39852545 - 39852417
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||| ||||||||||||||||  ||||| |||||||||||||||    
T  39852545 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaatccaatttagtaaacaatccttcga 39852446  T
Q  153 aatttgaatgattttgaataccactagac 181  Q
    |||||||||||||||||||||||| ||||    
T  39852445 aatttgaatgattttgaataccacaagac 39852417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 40013718 - 40014012
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || ||          |||||||||| ||||||  ||| |||||||||||||||||    
T  40013718 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccattaaaatccaattgattaaacaatccttcga 40013807  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||| ||| |||        || |||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  40013808 aatttgaatgattttgaataacacaagattttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 40013907  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       |||||| ||| ||||||||||||||| |||||||||||||||| || ||||| ||||||||||| ||  |||||| | ||    
T  40013908 aataccacaagactttttttaaattgcaaaaagtcttgattgaatatcacaagactttttcataattaaaaa-tcttttaaaatccc--agaatcctaat 40014004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 282 - 364
Target Start/End: Complemental strand, 43319218 - 43319135
Alignment:
Q  282 agagtcttgattgaataccacaagactttttcatgataa-aaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  43319218 agagtcttgattgaataccacaagactttttcatgataaaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 43319135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 53 - 265
Target Start/End: Original strand, 1461154 - 1461356
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||||||||    
T  1461154 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacagta----------caaaatccatcaaaatccaatttattaaacaatccttcga 1461243  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||| | | ||||       ||||||| || ||||||||||||||| | ||||||       |||| ||||||| |||||||||    
T  1461244 aatttgaatgattttgaatagcgcaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaattacaaagagtcttgattg 1461343  T
Q  253 aataacacaagac 265  Q
    |||| ||||||||    
T  1461344 aataccacaagac 1461356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 239 - 362
Target Start/End: Original strand, 16894052 - 16894174
Alignment:
Q  239 aagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattc 338  Q
    |||| ||||||||||||| ||||||||       |||||||||||| | ||||||||||||||||||| ||||| ||||||||||||||||||||||| |    
T  16894052 aagagtcttgattgaataccacaagactttttttaaattggaaagaattttgattgaataccacaagaattttt-atgataaaaaagtcttttaaaatcc 16894150  T
Q  339 cttagaatcatgatccaatacacc 362  Q
    |||||||| |||||||||||||||    
T  16894151 cttagaattatgatccaatacacc 16894174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 46 - 308
Target Start/End: Original strand, 9220716 - 9220968
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||||||||||||| ||||||||||| ||||||||||||| || |||||||| | || ||||||| |          |||| ||| ||| ||||||||||    
T  9220716 caatcctaagaaatatcatgttttcacgaaagactttttcgtgttaaaattttactataaaatccta----------caaattctaattcattaaacaat 9220805  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    |||| |||||||||||||||||||||| ||  ||||       ||||||| |||||||||||||||||||||||||||       |||||||||||| |     
T  9220806 ccttagaaatttgaatgattttgaatatcataagactttttttaagtgataaagagtcttgattgaatatcacaagactttttctaaatgacaaagagtt 9220905  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagact 308  Q
    ||||||||||| || | |||       || ||| ||| |||||||||||||||||||| ||||    
T  9220906 ttgattgaatatcatatgactttttttaagttgcaaatagtcttgattgaataccacacgact 9220968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 284 - 360
Target Start/End: Original strand, 7948554 - 7948630
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||| |  ||||||| | ||||||||||    
T  7948554 agtcttgattgaataccacgagactttttcataataaaaaagtcttttaaaatcctatagaatcctaatccaataca 7948630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 1511587 - 1511641
Alignment:
Q  282 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||    
T  1511587 agagtcttgattgaacaccacaagactttttcataataaaaatgtcttttaaaat 1511641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 363
Target Start/End: Complemental strand, 27786280 - 27786210
Alignment:
Q  293 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    |||||||||||||||||||| || |||||||||||||||||||| ||||  |||| | |||||||||||||    
T  27786280 tgaataccacaagacttttttataataaaaaagtcttttaaaatcccttgaaatcttaatccaatacaccc 27786210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 26795638 - 26795695
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||||||||||| ||||| || |||||||||||||||||||| ||||    
T  26795638 agtcttgattgaataccacaagatttttttataataaaaaagtcttttaaaatccctt 26795695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 26806581 - 26806638
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||||||||||||||||| || || ||||||| ||||||||||||||    
T  26806581 agtcttgattgaataccacaagacttttttataatcaaaaagttttttaaaattcctt 26806638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 281 - 318
Target Start/End: Complemental strand, 849203 - 849166
Alignment:
Q  281 aagagtcttgattgaataccacaagactttttcatgat 318  Q
    ||||||||||||||||||||||||||||||||||||||    
T  849203 aagagtcttgattgaataccacaagactttttcatgat 849166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 26795521 - 26795574
Alignment:
Q  288 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||||||||||||| || || ||||||| ||||||||||||||    
T  26795521 ttgattgaataccacaagacttttttataatcaaaaagttttttaaaattcctt 26795574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 26806702 - 26806759
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||| ||||||| ||||| || |||||||||||||||||||| ||||    
T  26806702 agtcttgattgaatatcacaagatttttttataataaaaaagtcttttaaaatccctt 26806759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 336
Target Start/End: Original strand, 28594449 - 28594500
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgat-aaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  28594449 tcttgattgaataccacaagacttttttataataaaaaaagtcttttaaaat 28594500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 223
Target Start/End: Original strand, 16894044 - 16894078
Alignment:
Q  189 aagtgattaagagtcttgattgaatatcacaagac 223  Q
    |||||||||||||||||||||||||| ||||||||    
T  16894044 aagtgattaagagtcttgattgaataccacaagac 16894078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 17518505 - 17518455
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||||||||||| |  |  |||||||||||||||||    
T  17518505 tcttgattgaataccacaagacttttttaaaacgaaaaagtcttttaaaat 17518455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 40410667 - 40410617
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||||||||||  |  | ||||||||||||||||||    
T  40410667 tcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaat 40410617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 2276210 - 2276267
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||||||| | | ||||| || ||||||||| |||||||||| ||||    
T  2276210 agtcttgattgaataccactaaatttttttattataaaaaagacttttaaaatccctt 2276267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 313
Target Start/End: Original strand, 9220856 - 9220889
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttc 313  Q
    ||||||||||||||||||| ||||||||||||||    
T  9220856 aaagagtcttgattgaatatcacaagactttttc 9220889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 378312 - 378272
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaa 324  Q
    |||||||||||||||||||||||||| || || ||||||||    
T  378312 agtcttgattgaataccacaagacttctttatcataaaaaa 378272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 308
Target Start/End: Original strand, 1461329 - 1461357
Alignment:
Q  280 aaagagtcttgattgaataccacaagact 308  Q
    |||||||||||||||||||||||||||||    
T  1461329 aaagagtcttgattgaataccacaagact 1461357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 39753514 - 39753434
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||||||| | ||||||| ||   ||||||||||| |||||| | ||  |||||  ||||||||||||||    
T  39753514 agtcttgattgaataccaccaaacttttttatttaaaaaaagtcttctaaaatccgttgaaatcacaatccaatacacccc 39753434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 16 - 363
Target Start/End: Original strand, 43581059 - 43581406
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43581059 gagagatagtaaaatcttaaaagaaaaaaataatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 43581158  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||     
T  43581159 aatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatac 43581258  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
     |||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  43581259 aacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagactttttcat 43581358  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43581359 gataaaaaagtcttttaaaattctttagaatcatgatccaatacaccc 43581406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 16 - 364
Target Start/End: Original strand, 44343365 - 44343713
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    |||||||| |||||| |||||||       ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  44343365 gagagatactaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcgtgaaagactttttcatgctaaaatttcactagaaaatcccacaa 44343464  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||       |||||||||||||||||||||||||||    
T  44343465 aatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttaaataccactaaactttttttaagtgattaagagtcttgattgaatat 44343564  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    ||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  44343565 cacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagactttttcat 44343664  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44343665 gataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 44343713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 16 - 364
Target Start/End: Complemental strand, 30441034 - 30440686
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       |||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  30441034 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcacgaaagactttttcatactaaaatttcactagaaaatcccacaa 30440935  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||     
T  30440934 aatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatac 30440835  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    |||||||        |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| ||||||||    
T  30440834 cacaagattttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagattttttcat 30440735  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30440734 gataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 30440686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 364
Target Start/End: Original strand, 40996603 - 40996967
Alignment:
Q  1 agagaagggaggagagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcag 100  Q
    |||||||||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  40996603 agagaagggaggagagagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcac 40996702  T
Q  101 tagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaaga 200  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       ||| ||||||||    
T  40996703 tagaaaatcctacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagcgattaaga 40996802  T
Q  201 gtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaatacc 300  Q
    |||||||||||||| ||||||||       |||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||||||||    
T  40996803 gtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacgagactttttttaaattggaaagagtcttgattgaatacc 40996902  T
Q  301 acaagactttttcatgat-aaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||| ||||||||| |||||| | ||||||||| |||||||||||||||||||||||||||    
T  40996903 acaagactctttcatgataaaaaaaatattttaaaatcccttagaatcatgatccaatacacccc 40996967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 16 - 364
Target Start/End: Original strand, 18914704 - 18915052
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18914704 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 18914803  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||     
T  18914804 aatccatcaaaatctgatttattaaacaaacctttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatac 18914903  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    ||||||||       ||| |||||||||| ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  18914904 cacaagactttttttaaaggacaaagaattttgattgaataacacaagacttttttaaaattggaaagagtcttgattgaataccacaagactttttcat 18915003  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  18915004 gataaaaaagtcttttaaaatcccttagatacatgatccaatacacccc 18915052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 16 - 363
Target Start/End: Complemental strand, 973422 - 973074
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  973422 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaa 973323  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |        ||||||||||||||||||||||||||     
T  973322 aatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactaaattttttttaagtgattaagagtcttgattgaatac 973223  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    ||||||||       |||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||    
T  973222 cacaagactttttttaaatgacaaagaatcttgattgaataacacaaaactttttttaaattggaaagagtcttgattgaataccacaagactttttcat 973123  T
Q  316 gat-aaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    ||| |||||| ||||||||||| ||||||||||||||||||||||||||    
T  973122 gataaaaaaaatcttttaaaatcccttagaatcatgatccaatacaccc 973074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 46 - 364
Target Start/End: Complemental strand, 12893616 - 12893298
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||    
T  12893616 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatctcacaaaatccatcaaaatctgatttattaaacaat 12893517  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
     ||||||||||||||||||||||||||||| |||||       ||||||||||||||||||||| |||| ||||||||       |||||||||||||||    
T  12893516 tcttcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagtcttgattaaataccacaagactttttttaaatgacaaagaatc 12893417  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    ||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  12893416 ttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagactttttcatgaaaaaaaaatcttttaaaataccttagaa 12893317  T
Q  346 tcatgatccaatacacccc 364  Q
    |||||||||||||||||||    
T  12893316 tcatgatccaatacacccc 12893298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 16 - 363
Target Start/End: Complemental strand, 47914504 - 47914157
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  47914504 gagagatagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 47914405  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||||     
T  47914404 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaatac 47914305  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    |||| |||       |||||||||||||||||||||||||||||||||||       |||||| ||||||| ||||||||||||||||||||||||||||    
T  47914304 cacatgactttttttaaatgacaaagaatcttgattgaataacacaagacttttttaaaattgaaaagagtattgattgaataccacaagactttttcat 47914205  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
     ||||| |||||||||||||| ||||||||||||||| ||||||||||    
T  47914204 tataaataagtcttttaaaatcccttagaatcatgattcaatacaccc 47914157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 12 - 361
Target Start/End: Original strand, 20275228 - 20275577
Alignment:
Q  12 gagagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatccc 111  Q
    ||||||||||||||||||| |||||||       |||| ||||||||||||||| |||||||| |||||||||||||||||||||||| || ||||||||    
T  20275228 gagagagagatagtaaaatcttaaaagaaaaaaacaatgctaagaaatctcatgctttcatgacagactttttcatgctaaaatttcactaaaaaatccc 20275327  T
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 211  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||       |||||||||||||||||||||||    
T  20275328 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccataagactttttttaagtgattaagagtcttgattga 20275427  T
Q  212 atatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttt 311  Q
    ||| || |||||       ||||||||| |||||||||||||||||| ||||||       |||||||||||| |||||||||||||||||||||||| |    
T  20275428 ataccataagactttttttaaatgacaaggaatcttgattgaataacccaagactttttttaaattggaaagaatcttgattgaataccacaagacttat 20275527  T
Q  312 tcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacac 361  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20275528 tcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacac 20275577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 14 - 363
Target Start/End: Complemental strand, 47879408 - 47879059
Alignment:
Q  14 gagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccac 113  Q
    ||||||||||||||||| |||||||       ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  47879408 gagagagatagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccac 47879309  T
Q  114 aaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaat 213  Q
    ||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||    
T  47879308 aaaatccatcaaaatctgatttattaaacaatccttttaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaat 47879209  T
Q  214 atcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttc 313  Q
    | |||| |||       |||||||||||||||||||||||||||||||||||       |||||| ||||||| ||||||||||||||||||||||||||    
T  47879208 accacatgactttttttaaatgacaaagaatcttgattgaataacacaagacttttttaaaattgaaaagagtattgattgaataccacaagactttttc 47879109  T
Q  314 atgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    || ||||| |||||||||||||| ||||||||||||||| ||||||||||    
T  47879108 attataaataagtcttttaaaatcccttagaatcatgattcaatacaccc 47879059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 16 - 365
Target Start/End: Original strand, 7719229 - 7719579
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    |||||||| |||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7719229 gagagatattaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 7719328  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||     
T  7719329 aatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccactagattttttttaagtgattaagagtcttgattgaatac 7719428  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtc-ttgattgaataccacaagactttttca 314  Q
    ||||||||       |||||||||| ||| ||||||||||||||||||||       ||||||||||||||| ||||||||||||||||||| |||||||    
T  7719429 cacaagactttttttaaatgacaaataatattgattgaataacacaagactttttttaaattggaaagagtctttgattgaataccacaagaatttttca 7719528  T
Q  315 tgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccca 365  Q
    ||||||||||||||||||||||   ||| ||||||||||||||||| ||||    
T  7719529 tgataaaaaagtcttttaaaatcttttacaatcatgatccaatacaaccca 7719579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 364
Target Start/End: Complemental strand, 34009265 - 34008905
Alignment:
Q  1 agagaagggaggagagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcag 100  Q
    ||||||||||| || ||||||||||||||| |||||||       ||||||||||||||||||||||||| ||||||||||||| |||||||||||| |     
T  34009265 agagaagggagaag-gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcttgaaagacttttttatgctaaaattttat 34009167  T
Q  101 tagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccacta-gacnnnnnnnaagtgattaag 199  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||       |||||||||||    
T  34009166 tagaaaattccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactaggactttttttaagtgattaag 34009067  T
Q  200 agtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaatac 299  Q
    ||| ||||||||||| ||||||||       |||||||||| ||||||||||||||||||||||||       |||||| ||||||||||||||||||||    
T  34009066 agtgttgattgaataccacaagactttttttaaatgacaaataatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaatac 34008967  T
Q  300 cacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |   ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  34008966 c---agactttttcatgataaaaaaatcttttaaaatcccttagaatcatgatccaatacacccc 34008905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 34695515 - 34695215
Alignment:
Q  12 gagagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatccc 111  Q
    ||||||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34695515 gagagagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccc 34695416  T
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 211  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||       |||||||||||||||||||||||    
T  34695415 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatggttttgaataccactggactttttttaagtgattaagagtcttgattga 34695316  T
Q  212 atatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttt 311  Q
    ||| ||||| ||       ||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||    
T  34695315 ataccacaaaactttttttaaatgacaaggaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagactttt 34695216  T
Q  312 t 312  Q
    |    
T  34695215 t 34695215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 16 - 362
Target Start/End: Original strand, 32142886 - 32143235
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    |||||||| |||||| |||||||       ||||| |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  32142886 gagagatactaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgtttttatggaagactttttcatgctaaaatttcactagaaaatcccacaa 32142985  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagac--nnnnnnnaagtgattaagagtcttgattgaat 213  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||  |||         ||||||||||||||||||||| |||    
T  32142986 aatccatcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccacgtgacttttttttgaagtgattaagagtcttgattcaat 32143085  T
Q  214 atcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttc 313  Q
    | || |||||       |||||||||| ||  || |||||||||||||||||       ||||| |||||||||||||||||||| ||||||||||||||    
T  32143086 accataagactttttttaaatgacaaaaaaaatttattgaataacacaagactttttttaaattagaaagagtcttgattgaatatcacaagactttttc 32143185  T
Q  314 atgat-aaaaaagtcttttaaaattccttagaatcatgatccaatacacc 362  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  32143186 atgataaaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 32143235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 29614770 - 29615077
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  29614770 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 29614869  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||| ||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  29614870 aatttgaatgattttgaatatcacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 29614969  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       |||||| ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||  | ||||||||| ||    
T  29614970 aataccacaagactttttttaaattgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcataat 29615069  T
Q  353 ccaataca 360  Q
    ||||||||    
T  29615070 ccaataca 29615077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 15 - 373
Target Start/End: Complemental strand, 10068697 - 10068340
Alignment:
Q  15 agagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccaca 114  Q
    ||||||| ||||||||||||||||       ||||||||| |||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||    
T  10068697 agagagagagtaaaattttaaaagaaaaa--caatcctaacaaatctcatgtttttatgaaatactttttcatgctaaaatttcactagaaaatcccaca 10068600  T
Q  115 aaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaata 214  Q
    |||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||| ||||       ||||||| || | |||||||||||||    
T  10068599 aaatccatcaaaatttaatttattaaacaatccttcaaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaaatcttgattgaata 10068500  T
Q  215 tcac-aagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttc 313  Q
     | | |||||       ||||| |||||| |||||||| |||| ||||||||       |||||| ||||||| ||||||||||| ||||||||||||||    
T  10068499 cctcaaagacttttttaaaatggcaaagagtcttgattaaataccacaagactttttttaaattgcaaagagttttgattgaatatcacaagactttttc 10068400  T
Q  314 atgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaatca 373  Q
    || || ||||||||||||||||| | | ||||||||  ||||||||| ||| ||||||||    
T  10068399 ataattaaaaagtcttttaaaatccatcagaatcatattccaatacatcccccttaatca 10068340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 16 - 364
Target Start/End: Complemental strand, 7113690 - 7113343
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    |||||||||||||||  ||||||       |||||||||||||| |||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  7113690 gagagatagtaaaatcctaaaagaaaaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaattttcctagaaaatcccacaa 7113591  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||| |||       |||||||||| |||    ||||||||     
T  7113590 aatctatcaaaatctgatttattaaacaatcctgcgaaatttgaattattttgaataccactggactttttttaagtgattaaaagt----attgaatac 7113495  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    ||||| ||       |||||| ||| |||||| |||||||||||||||||       ||||||||||||||||||||||||||||| || ||||| ||||    
T  7113494 cacaaaactttttttaaatgataaaaaatcttaattgaataacacaagactttttttaaattggaaagagtcttgattgaatacca-aatactttgtcat 7113396  T
Q  316 gat-aaaaaagtcttttaaaattccttagaatc---atgatccaatacacccc 364  Q
    ||| |||||||||||||||||| ||||||||||   |||||||||||||||||    
T  7113395 gataaaaaaagtcttttaaaatcccttagaatcatgatgatccaatacacccc 7113343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 53 - 369
Target Start/End: Complemental strand, 28342541 - 28342225
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  28342541 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 28342442  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||| ||||||||| | ||||||       |||||||||||| |||||||||    
T  28342441 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtctcgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 28342342  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       |||||| ||| | |||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  28342341 aataccacaagactttttttaaattgcaaaaaatcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 28342242  T
Q  353 ccaatacaccccactta 369  Q
    |||||||| ||| ||||    
T  28342241 ccaatacatccccctta 28342225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 7718361 - 7718538
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  7718361 caatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 7718460  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagac 223  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| ||||||||    
T  7718461 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagac 7718538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 53 - 360
Target Start/End: Complemental strand, 23101492 - 23101185
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  23101492 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 23101393  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  23101392 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 23101293  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       |||||| ||| | |||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  23101292 aataccacaagactttttttaaattgcaaaaattcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 23101193  T
Q  353 ccaataca 360  Q
    || |||||    
T  23101192 ccgataca 23101185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 65 - 361
Target Start/End: Complemental strand, 727692 - 727405
Alignment:
Q  65 gttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgat 164  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||          | |||||||||||||||||| ||||||||||||||    
T  727692 gttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatc----------tgatttattaaacaatcctttgaaatttgaatgat 727603  T
Q  165 tttgaataccactagacnnnnnnn-aagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaag 263  Q
    ||||||||| ||||||         ||||||| |||||| ||||||||||||||||||||       |||||||||||||| ||||||||||||||||||    
T  727602 tttgaatactactagatttttttttaagtgataaagagttttgattgaatatcacaagactttttttaaatgacaaagaattttgattgaataacacaag 727503  T
Q  264 acnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacac 361  Q
    ||       |||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||    
T  727502 actttttttaaattgaaaagagtcttgattgaataccgcaagactttttcatgataaaaaagtcatttaaaatccattagaatcatgatccaatacac 727405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 114 - 363
Target Start/End: Complemental strand, 31639015 - 31638766
Alignment:
Q  114 aaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaat 213  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||    
T  31639015 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgatagaat 31638916  T
Q  214 atcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttc 313  Q
    | ||||  |        |||||||||||||| ||||||||||||||||||||       |||||| |||||||||||||||||||||||| |||||||||    
T  31638915 accacacaagtttttttaaatgacaaagaattttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccacatgactttttc 31638816  T
Q  314 atgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  31638815 atgataaaaaagtcttttaaaatctcttagaatcatgattcaatacaccc 31638766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 53 - 360
Target Start/End: Complemental strand, 39784293 - 39783986
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  39784293 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 39784194  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    ||||| |||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  39784193 aatttaaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 39784094  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       |||||| ||| |||||||||||||||||||| ||||||||||| || ||||||||||||||||| || |||||||   ||    
T  39784093 aataccacaagactttttttaaattgcaaaaagtcttgattgaataccacatgactttttcataattaaaaagtcttttaaaatcccatagaatctcaat 39783994  T
Q  353 ccaataca 360  Q
    ||||||||    
T  39783993 ccaataca 39783986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 53 - 369
Target Start/End: Original strand, 9882243 - 9882558
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||| ||||||||||||||| |  ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  9882243 aagaaatctcatttttt-atgaaagactttttcttcttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 9882341  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  9882342 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 9882441  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||| ||       |||||| ||| |||||||||||||||||| ||||||||||||| || ||||||||||||||||| |  ||||||| | ||    
T  9882442 aataccacaaaactttttttaaattgcaaaaagtcttgattgaataccataagactttttcataattaaaaagtcttttaaaatcctatagaatcctaat 9882541  T
Q  353 ccaatacaccccactta 369  Q
    |||||||| ||| ||||    
T  9882542 ccaatacatccctctta 9882558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 39219346 - 39219552
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  39219346 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 39219445  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| |||||||||||||| | || |||||||||||||||||||||||| |||||       ||||||||||||||||||||||||||     
T  39219446 aatccatcaaaatctgatttattaaacaat-catcaaaatttgaatgattttgaataccaatagactttttttaagtgattaagagtcttgattgaataa 39219544  T
Q  216 cacaagac 223  Q
    ||||||||    
T  39219545 cacaagac 39219552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 74 - 336
Target Start/End: Complemental strand, 12963874 - 12963612
Alignment:
Q  74 aaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatac 173  Q
    |||||||||||| | ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  12963874 aaagactttttcttactaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgattttggatac 12963775  T
Q  174 cactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnna 273  Q
    ||| ||||       |||| || || | ||||||||||||||| ||||||       |||||||||||| ||||||||||||| ||||||||       |    
T  12963774 cacgagactttttttaagtaatgaaaaatcttgattgaatatctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagacttttttta 12963675  T
Q  274 aattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    | ||| |||||||||||||||| ||||||||||||||||| | || |||||||||||||||||    
T  12963674 agttgcaaagagtcttgattgagtaccacaagactttttcgtaattaaaaagtcttttaaaat 12963612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 33382880 - 33382548
Alignment:
Q  1 agagaagggaggagagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcag 100  Q
    ||||||||||| ||| |||||||||||| |||||||||       |||||  || ||||||||| ||||||| |||||||||||| || ||||||| ||     
T  33382880 agagaagggagaagaaagagatagtaaa-ttttaaaagaaaaa--caatctaaataaatctcatcttttcataaaagactttttcttgttaaaattacac 33382784  T
Q  101 tagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaaga 200  Q
    || ||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||  ||||       ||||||| || |    
T  33382783 tacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttaaatgattttgaataccatgagactttttttaagtgatgaaaa 33382684  T
Q  201 gtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaatacc 300  Q
    |||||||||||||| | ||||||       |||||||||||| ||||||||||||| |||||| |       || ||| ||| |||||||||||||||||    
T  33382683 gtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaaggctttttttaagttgcaaaaagtcttgattgaatacc 33382584  T
Q  301 acaagactttttcatgataaaaaagtcttttaaaat 336  Q
    | ||||||||||||| || |||||||||||||||||    
T  33382583 ataagactttttcataattaaaaagtcttttaaaat 33382548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 53 - 369
Target Start/End: Complemental strand, 18838583 - 18838267
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  18838583 aagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatctttcga 18838484  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||| ||| || ||||||||||||||| | ||||||       |||| ||||||| |||||||||    
T  18838483 aatttgaatgattttgaataccacaagactttttttaagcgatgaaaagtcttgattgaatacctcaagacttttttaaaattacaaagagtcttgattg 18838384  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||| |        || ||| ||| |||||||||||||||||||||||| ||||||| || ||||||||||||| ||| || ||||||| | ||    
T  18838383 aataccacaatattttttttaagttgcaaaaagtcttgattgaataccacaagacattttcataattaaaaagtcttttataatcccatagaatcctaat 18838284  T
Q  353 ccaatacaccccactta 369  Q
    |||||||| ||| ||||    
T  18838283 ccaatacatccccctta 18838267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 53 - 360
Target Start/End: Complemental strand, 7993336 - 7993029
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    ||||||||| || |||||||||||||||||||| || ||||||| || || ||||||||||| |||||||||||||   |||||||||||||||||||||    
T  7993336 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacacaatccatcaaaattcaatttattaaacaatccttcga 7993237  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||  ||||       ||||||| || ||| ||||||||||| | ||||||       ||||| |||||| |||||||||    
T  7993236 aatttgaatgattttgaataccataagactttttttaagtgatgaaaagttttgattgaatacctcaagacttttttaaaatggcaaagagtcttgattg 7993137  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||| ||||       || ||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| |  ||||||| | ||    
T  7993136 aataccacgagactttttttaagttgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcctatagaatcttaat 7993037  T
Q  353 ccaataca 360  Q
    ||||||||    
T  7993036 ccaataca 7993029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 53 - 360
Target Start/End: Complemental strand, 3023120 - 3022813
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  3023120 aagaaatctcatcttttcatgaaaaactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 3023021  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||||||| || | ||||||||||||| | ||||||       |||||||||| | |||||||||    
T  3023020 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaaaagtcttgattg 3022921  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       || ||  ||| |||||||||| ||||||| || |||||||||| || ||||| ||||||||||| || ||||||| | ||    
T  3022920 aataccacaagactttttttaagttttaaaaagtcttgattaaataccataaaactttttcataattaaaaaatcttttaaaatcccatagaatcctaat 3022821  T
Q  353 ccaataca 360  Q
     |||||||    
T  3022820 tcaataca 3022813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 46 - 369
Target Start/End: Original strand, 3797066 - 3797379
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||||||||||||||| |||||||| | |||||||||||||||||||||||||| ||||||||||||         ||||||||| ||||||||||||||    
T  3797066 caatcctaagaaatct-atgttttcttaaaagactttttcatgctaaaatttcactagaaaatccca---------tcaaaatctaatttattaaacaat 3797155  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    ||||| |||||| |||||| ||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       |||||||||||| ||    
T  3797156 ccttcaaaattttaatgatcttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtc 3797255  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    ||||||||||| || | |||       |||||| ||||||||||||||||||||| ||| ||| |||||| || ||||||||||||||||||| ||||||    
T  3797256 ttgattgaatatcagatgactttttttaaattgcaaagagtcttgattgaatacctcaaaactatttcataattaaaaagtcttttaaaattcattagaa 3797355  T
Q  346 tcatgatccaatacaccccactta 369  Q
    |||| ||| |||||| ||| ||||    
T  3797356 tcataatctaatacatccccctta 3797379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 53 - 356
Target Start/End: Original strand, 28034811 - 28035114
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||  || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  28034811 aagaaatctcatcttttcatgaaagacttttttttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 28034910  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    ||||||||| |||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       |||||||||| | |||||||||    
T  28034911 aatttgaataattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatatctcaagacttttttaaaatgacaaaaagtcttgattg 28035010  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatga-taaaaaagtcttttaaaattccttagaatcatga 351  Q
    |||| ||||||||       || ||| ||| | |||| |||||||||||||| ||||||| || | |||||||||||||||||||||| ||||||| | |    
T  28035011 aataccacaagac-ttttttaagttgcaaaaaatcttaattgaataccacaaaactttttaataattaaaaaagtcttttaaaattccatagaatcctaa 28035109  T
Q  352 tccaa 356  Q
    |||||    
T  28035110 tccaa 28035114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 46 - 364
Target Start/End: Complemental strand, 9180071 - 9179766
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||          ||||||||||||||    
T  9180071 caatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaaattcactagaaaatcccacaaaatcca----------atttattaaacaat 9179982  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    |||||| ||||| | |||||||| ||||||| ||||       ||||||| ||||||||||||||||||  |||| ||       |||||||||||||||    
T  9179981 ccttcggaatttaagtgattttgtataccacaagactttttttaagtgatgaagagtcttgattgaatacgacaaaactttttttaaatgacaaagaatc 9179882  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    |||||||||||  ||||          || ||| ||||||||   || ||||| |||||||||||||||||||||||||||||||||||||   ||||||    
T  9179881 ttgattgaatattacaaatttttgtttaagttgcaaagagtc---atcgaatatcacaagactttttcatgataaaaaagtcttttaaaatcttttagaa 9179785  T
Q  346 tcatgatccaatacacccc 364  Q
    |  | ||||||||||||||    
T  9179784 tgctaatccaatacacccc 9179766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 47 - 347
Target Start/End: Complemental strand, 19251729 - 19251439
Alignment:
Q  47 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatc 146  Q
    ||||| ||||||| ||| ||||||||||||||||||||  |||||||||||||  |||||||||  |||||||||          |||||||||||||||    
T  19251729 aatcccaagaaatttcaggttttcatgaaagactttttattgctaaaatttcacaagaaaatccatcaaaatcca----------atttattaaacaatc 19251640  T
Q  147 cttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatct 246  Q
    |||||||||||||||||||||||||||||| ||||       ||||||| || | | ||||||||||| | ||||||       |||||||||||| |||    
T  19251639 cttcgaaatttgaatgattttgaataccacgagactttttttaagtgatgaaaaattttgattgaatacctcaagacttttttaaaatgacaaagagtct 19251540  T
Q  247 tgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaat 346  Q
    |||||||||| ||||||||       || ||| |||||||||||||||||||| ||||||||||||| | || |||||||||||||||||  ||||||||    
T  19251539 tgattgaataccacaagactttttttaagttgcaaagagtcttgattgaatactacaagactttttcgtaattaaaaagtcttttaaaatctcttagaat 19251440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 112 - 336
Target Start/End: Original strand, 40460772 - 40460996
Alignment:
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 211  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  40460772 acaaaatccatcaaaatccaatttattaaacaatcattcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 40460871  T
Q  212 atatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttt 311  Q
    ||||| ||||||       |||||||||||| |||| |||||||| ||||||||       |||||| ||| |||||||||| |||||||||| ||||||    
T  40460872 atatctcaagacttttttaaaatgacaaagagtcttaattgaatatcacaagacattttttaaattgcaaaaagtcttgattaaataccacaaaactttt 40460971  T
Q  312 tcatgataaaaaagtcttttaaaat 336  Q
    |||| || |||||||||||||||||    
T  40460972 tcataattaaaaagtcttttaaaat 40460996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 46 - 336
Target Start/End: Complemental strand, 12740573 - 12740284
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||| ||||||||||||| |||| |||||||||||| || || ||||||| || || |||||||||||||||| |||||||||  ||||||||||||||    
T  12740573 caatcttaagaaatctcatctttttatgaaagactttctcttgttaaaattacactataaaatcccacaaaatctatcaaaatc-catttattaaacaat 12740475  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    |||| |||||||||||||||||||||||||| ||||       || |||| || | |||||||| |||| | ||||||       |||||||||||||||    
T  12740474 cctttgaaatttgaatgattttgaataccacgagactttttttaaatgatgaaaaatcttgattaaatacctcaagactttttaaaaatgacaaagaatc 12740375  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||| ||||||||       || ||| ||| |||||| ||| |||| ||| ||| |||||||| || |||||||||||||||||    
T  12740374 ttgattgaataccacaagactttttttaagttgcaaaaagtcttaattaaatatcaccagattttttcataattaaaaagtcttttaaaat 12740284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 193 - 364
Target Start/End: Complemental strand, 8078457 - 8078285
Alignment:
Q  193 gattaagagtcttgattgaatatcacaagacnnnnnnn-aaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttga 291  Q
    |||||||||||||||||||||| |||||||         ||||||||||||||||||||||||||||||||          |||||||||||||||||||    
T  8078457 gattaagagtcttgattgaataccacaagattcttttttaaatgacaaagaatcttgattgaataacacaaattttttttaaaattggaaagagtcttga 8078358  T
Q  292 ttgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8078357 ttgaataccacaagacttttttatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 8078285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 112 - 336
Target Start/End: Complemental strand, 37328062 - 37327838
Alignment:
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 211  Q
    |||||||||||||||||   |||||||||||||||||| |||||||||||||||||||||||||| ||||       |||| || || ||||||||||||    
T  37328062 acaaaatccatcaaaattcaatttattaaacaatcctttgaaatttgaatgattttgaataccacaagactttttttaagtaatgaaaagtcttgattga 37327963  T
Q  212 atatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttt 311  Q
    ||| | ||||||       |||||||||||| ||||||||||||| ||||||||       || ||| ||| ||||||||||||||||||||||||||||    
T  37327962 atacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagactttt 37327863  T
Q  312 tcatgataaaaaagtcttttaaaat 336  Q
    |||| || |||||||||||||||||    
T  37327862 tcataattaaaaagtcttttaaaat 37327838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 112 - 360
Target Start/End: Complemental strand, 39028232 - 39027984
Alignment:
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 211  Q
    ||||||||||||||||||  ||||||||||||||| |||| |||||||| ||||||||||| ||| ||||       ||||||| || ||||||||||||    
T  39028232 acaaaatccatcaaaatccaatttattaaacaatctttcgtaatttgaacgattttgaataacacaagactttttttaagtgatgaaaagtcttgattga 39028133  T
Q  212 atatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttt 311  Q
    ||||| ||||||       |||||||||||| ||||||||||||| |||||||        || ||| ||| ||||||||||||||||||||||||||||    
T  39028132 atatctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagattttttttaagttgcaaaaagtcttgattgaataccacaagactttt 39028033  T
Q  312 tcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||| || |||||||||||||||||||  || |||| | ||||||||||    
T  39028032 tcataattaaaaagtcttttaaaattctataaaatcctaatccaataca 39027984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 43679592 - 43679491
Alignment:
Q  76 agactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatacca 175  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43679592 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatacca 43679493  T
Q  176 ct 177  Q
    ||    
T  43679492 ct 43679491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 110 - 358
Target Start/End: Original strand, 46405494 - 46405742
Alignment:
Q  110 ccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgatt 209  Q
    ||||||||||||||||||||  ||||||||||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||    
T  46405494 ccacaaaatccatcaaaatccaatttattaaacaatcatttgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgatt 46405593  T
Q  210 gaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactt 309  Q
    ||||| | ||||||       ||| |||||||| ||||||||||||| | |||||        || ||| ||| |||||||||||||||||||| |||||    
T  46405594 gaatacctcaagacttttttaaaacgacaaagagtcttgattgaataccgcaagattttttttaagttgcaaaaagtcttgattgaataccacatgactt 46405693  T
Q  310 tttcatgataaaaaagtcttttaaaattccttagaatcatgatccaata 358  Q
    |||||| || |||||||||||||||||||| ||||||| | ||||||||    
T  46405694 tttcataattaaaaagtcttttaaaattccatagaatcctaatccaata 46405742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 239 - 363
Target Start/End: Original strand, 39219526 - 39219651
Alignment:
Q  239 aagaatcttgattgaataacacaagacnnnnnnn-aaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatt 337  Q
    |||| ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39219526 aagagtcttgattgaataacacaagacttttttttaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatt 39219625  T
Q  338 ccttagaatcatgatccaatacaccc 363  Q
    ||||||||| ||||||||||||||||    
T  39219626 ccttagaattatgatccaatacaccc 39219651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 123 - 371
Target Start/End: Original strand, 17001099 - 17001347
Alignment:
Q  123 caaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaaga 222  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||| | |        ||||||| || |||||| |||||||| | |||||    
T  17001099 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacgatattttttttaagtgatgaaaagtctttattgaatacctcaaga 17001198  T
Q  223 cnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaa 322  Q
    |       |||||||||||| ||||||||||||| ||||||||       || ||| ||| |||||||||||||||||||||||||||||||| || |||    
T  17001199 ctttttaaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagactttttcataattaaa 17001298  T
Q  323 aagtcttttaaaattccttagaatcatgatccaatacaccccacttaat 371  Q
    |||| |||||||||  | ||||||| | |||||||||| ||| ||||||    
T  17001299 aagttttttaaaatctcatagaatcctaatccaatacatcccccttaat 17001347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 238 - 364
Target Start/End: Complemental strand, 34695247 - 34695121
Alignment:
Q  238 aaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatt 337  Q
    ||||| ||||||||||||| ||||||||       ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  34695247 aaagagtcttgattgaataccacaagactttttttaaattggaaagagtcttgattgaataccacaagactttttcataataaaaaagtcttttaaaatc 34695148  T
Q  338 ccttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||| |||||||||||    
T  34695147 ccttagaatcatgattcaatacacccc 34695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 53 - 254
Target Start/End: Complemental strand, 8675527 - 8675326
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| ||||||| ||||| |||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  8675527 aagaaatctcatcttttcataaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 8675428  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    | ||| |||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       |||||||||||| | |||||||    
T  8675427 agtttaaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagttttgattg 8675328  T
Q  253 aa 254  Q
    ||    
T  8675327 aa 8675326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 81 - 360
Target Start/End: Complemental strand, 32883948 - 32883668
Alignment:
Q  81 ttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactaga 180  Q
    ||||| || ||||||| || || |||||||||| |||||||||||||||  ||||| ||||||||| ||||||||||||||||||||||||||||| |||    
T  32883948 ttttcttgttaaaattacactacaaaatcccacgaaatccatcaaaatccaatttaataaacaatcattcgaaatttgaatgattttgaataccacaaga 32883849  T
Q  181 cnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattgga 280  Q
    |       ||||||| || |||||| ||||||||   ||||||       |||||||||| | ||||||||||||| || |||||       || ||| |    
T  32883848 ctttttttaagtgatgaaaagtcttaattgaatacttcaagacttttttaaaatgacaaaaagtcttgattgaataccataagactttttttaagttgca 32883749  T
Q  281 aagagtctt-gattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    || |||||| ||||||||| ||||| |||||||||| || ||||| ||||||||||| || ||||||||| ||||||||||    
T  32883748 aaaagtcttagattgaatatcacaaaactttttcataattaaaaaatcttttaaaatcccatagaatcataatccaataca 32883668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 43187356 - 43187485
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||||| || ||||||||||| |||||||||||||||||| || |||||||||| |||||||||| ||||||| ||||||||||  ||||||||||||||    
T  43187356 caatcccaaaaaatctcatgtcttcatgaaagactttttcttgttaaaatttcactagaaaatccgacaaaattcatcaaaatccaatttattaaacaat 43187455  T
Q  146 ccttcgaaatttgaatgattttgaatacca 175  Q
     |||| ||||||||||||||||||||||||    
T  43187456 gcttcaaaatttgaatgattttgaatacca 43187485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 53 - 336
Target Start/End: Complemental strand, 41827498 - 41827225
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||| ||||| || ||||||| || || | ||||||||||||||||||||||||  ||||||||||||||||||| |    
T  41827498 aagaaatctcatattttcatgaaagacattttcttgttaaaattacactacacaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 41827399  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
              |||||||||||||| ||||       |||| || || ||||||||||||| | | |||||        |||||||||| | |||||||||    
T  41827398 ----------attttgaataccacaagactttttttaagttatgaaaagtcttgattgaacacctcaagatttttttaaaatgacaaaaagtcttgattg 41827309  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||| ||||||||       || ||| ||| | |||||||||||||||||||||||||||||| || |||||||||||||||||    
T  41827308 aataccacaagactttttttaagttgcaaaaattcttgattgaataccacaagactttttcataattaaaaagtcttttaaaat 41827225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 273 - 369
Target Start/End: Complemental strand, 43679451 - 43679354
Alignment:
Q  273 aaattggaaagagtcttgattgaataccacaagactttttcatgataa-aaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||| ||||    
T  43679451 aaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaaaatcttttaaaatcccttagaatcatgatccaatacatccctctta 43679354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 25805862 - 25805763
Alignment:
Q  77 gactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccac 176  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||| |||   ||||||||||||||||| |||||||||||||||||||||||||||    
T  25805862 gactttttcatgctaaaattttattagaaaatcccacaaaatccatcataattcaatttattaaacaatcctacgaaatttgaatgattttgaataccac 25805763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 112 - 336
Target Start/End: Original strand, 44121965 - 44122190
Alignment:
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 211  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||        ||||||| || ||||||||||||    
T  44121965 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagattttttttaagtgatgaaaagtcttgattga 44122064  T
Q  212 atatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtc-ttgattgaataccacaagacttt 310  Q
    ||| | ||||||       |||||||||||| ||||||||||||| |||||          || ||| ||| | || ||||||||||||||||| |||||    
T  44122065 atacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaaatttttttttaagttgcaaaaaatctttgattgaataccacaatacttt 44122164  T
Q  311 ttcatgataaaaaagtcttttaaaat 336  Q
    ||||| || ||||| |||||||||||    
T  44122165 ttcataattaaaaaatcttttaaaat 44122190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 56 - 336
Target Start/End: Original strand, 44256775 - 44257055
Alignment:
Q  56 aaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaat 155  Q
    ||||||||| |||| |||||| |||||||| || ||||||| || |  ||||||| ||||||| |||| |||||  ||||||||||||||| ||||||||    
T  44256775 aaatctcatattttgatgaaaaactttttcttgttaaaattacactgcaaaatccaacaaaattcatccaaatccaatttattaaacaatcattcgaaat 44256874  T
Q  156 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaat 255  Q
    ||||||||||||||||||||| | ||       ||||||| || ||||||||||||||| |  ||||        |||||||||| | |||||||| |||    
T  44256875 ttgaatgattttgaataccacgatactttttttaagtgatgaaaagtcttgattgaataccttaagatttttttaaaatgacaaaaagtcttgattaaat 44256974  T
Q  256 aacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |  |||||||       |  ||| ||| ||||||||||||||||||||  |||||||||| || ||||| | |||||||||    
T  44256975 actacaagacttttttaaggttgcaaaaagtcttgattgaataccacagaactttttcataattaaaaacttttttaaaat 44257055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 53 - 161
Target Start/End: Original strand, 37972873 - 37972981
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    ||||| |||||| |||||||||||||||||||| || ||||||| || || |||||||| |||||||||||||||||  |||||||||| ||||||||||    
T  37972873 aagaagtctcatcttttcatgaaagactttttcttgttaaaattacactataaaatcccgcaaaatccatcaaaatccaatttattaaataatccttcga 37972972  T
Q  153 aatttgaat 161  Q
    |||||||||    
T  37972973 aatttgaat 37972981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 53 - 265
Target Start/End: Complemental strand, 509840 - 509638
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||  ||          | ||||||||||||||||||  ||||||||||||||| |||||    
T  509840 aagaaatctcatcttttcatgaaagactttttcttgttaaaatccca----------ctacaaaatccatcaaaatccaatttattaaacaatcgttcga 509751  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||| | |||||||||    
T  509750 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaatagtcttgattg 509651  T
Q  253 aataacacaagac 265  Q
    |||| ||||||||    
T  509650 aataccacaagac 509638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 360
Target Start/End: Original strand, 48117746 - 48117906
Alignment:
Q  200 agtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaatac 299  Q
    ||||||||||||||| | ||||||       |||||||||||| ||||||||||||| ||||||||       || ||| ||| ||||||||||||||||    
T  48117746 agtcttgattgaatacctcaagacttttcaaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaatac 48117845  T
Q  300 cacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||||||||||||||| || ||||||||||||||||| || ||||||  | ||||||||||    
T  48117846 cacaagactttttcataattaaaaagtcttttaaaatcccatagaatactaatccaataca 48117906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 10676463 - 10676596
Alignment:
Q  90 taaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnna 189  Q
    ||||||||||  ||||||| ||| |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||| |  ||||       |    
T  10676463 taaaatttcacaagaaaattccataaaatccatccaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatacaatgagacttttttta 10676562  T
Q  190 agtgattaagagtcttgattgaatatcacaagac 223  Q
    |||||| || ||||||||||||||| ||||||||    
T  10676563 agtgatgaaaagtcttgattgaataccacaagac 10676596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 53 - 172
Target Start/End: Complemental strand, 19810983 - 19810874
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||| ||||||||||||          ||||||||||||||| || ||    
T  19810983 aagaaatctcatgttttcatgaaagacatttttatgctaaaatttcactagaaaattccacaaaatcca----------atttattaaacaatcatttga 19810894  T
Q  153 aatttgaatgattttgaata 172  Q
    ||||||||||||||||||||    
T  19810893 aatttgaatgattttgaata 19810874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 112 - 262
Target Start/End: Complemental strand, 29585649 - 29585500
Alignment:
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 211  Q
    ||||||||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||  ||||       |||||| ||| ||| ||||||||    
T  29585649 acaaaatccatcaaaatccaaattattaaacaatccttcaaaatttgaatgattttgaataccagaagactttttttaagtga-taaaagttttgattga 29585551  T
Q  212 atatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 262  Q
    ||| | ||||||       |||||||||||||||||||||||||| |||||    
T  29585550 atacctcaagacttttttaaaatgacaaagaatcttgattgaataccacaa 29585500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 112 - 360
Target Start/End: Original strand, 33892315 - 33892564
Alignment:
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 211  Q
    ||||||| ||| ||||||  ||||||| ||||||| ||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  33892315 acaaaattcataaaaatccaatttatttaacaatcattcgaaatttgaatgattttgaataccacaagactttgtttaagtgatgaaaagtcttgattga 33892414  T
Q  212 atatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaaga--cnnnnnnnaaattggaaagagtcttgattgaataccacaagactt 309  Q
    ||| | ||||||       |||||||||||| | |||||||||| ||  ||||          |||||| ||| | | ||||||||||||||||| ||||    
T  33892415 atacctcaagacttttttaaaatgacaaagagtgttgattgaat-acctaagaatttttttttaaattgcaaaaaattttgattgaataccacaaaactt 33892513  T
Q  310 tttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||||| || |||||||||||||||||  | ||||||| | ||||||||||    
T  33892514 tttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 33892564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 176
Target Start/End: Original strand, 1470203 - 1470362
Alignment:
Q  14 gagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccac 113  Q
    ||||||||| ||||||| |||||||       |||| ||| ||||||||  |||||||  ||||| |||||||||||||||||| |  ||||||||||||    
T  1470203 gagagagatggtaaaatcttaaaagaaaaaaacaatgctaggaaatctc--gttttcaaaaaagattttttcatgctaaaattttatcagaaaatcccac 1470300  T
Q  114 aaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccac 176  Q
    |||| | |||||||||| ||| |||||||||| |||  ||||||||| |||||||||||||||    
T  1470301 aaaa-ctatcaaaatctaattcattaaacaatgctttaaaatttgaacgattttgaataccac 1470362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 56 - 262
Target Start/End: Original strand, 44623295 - 44623491
Alignment:
Q  56 aaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaat 155  Q
    |||| |||| |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||| ||          |||||||||||| || || |||||    
T  44623295 aaatatcatatttttatgagagactttttcattctaaaatttcactagaaaattccacaaaattca----------atttattaaacagtctttagaaat 44623384  T
Q  156 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaat 255  Q
     |||||||||||||||| ||| ||||       ||||||| ||||||||||||| |||| ||||||||       |||||||||||| ||||||||||||    
T  44623385 atgaatgattttgaatatcacgagacctttttaaagtgatgaagagtcttgattaaataccacaagactttttttaaatgacaaagagtcttgattgaat 44623484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 244 - 345
Target Start/End: Original strand, 10676575 - 10676676
Alignment:
Q  244 tcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttag 343  Q
    ||||||||||||| ||||||||       |||||| |||||||||||||| |||||||||||| |||||||| || ||||||||||||||||| ||||||    
T  10676575 tcttgattgaataccacaagaccttttttaaattgcaaagagtcttgattaaataccacaagattttttcataattaaaaagtcttttaaaatcccttag 10676674  T
Q  344 aa 345  Q
    ||    
T  10676675 aa 10676676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 364
Target Start/End: Complemental strand, 31401645 - 31401586
Alignment:
Q  305 gactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  31401645 gactttttcatgataaaaaagtcttttaaagttctttagaatcatgatccaatacacccc 31401586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 280 - 369
Target Start/End: Complemental strand, 29893090 - 29893001
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 369  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||  | ||||||| | ||| |||||| ||| ||||    
T  29893090 aaagagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatctaatacatccccctta 29893001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 280 - 369
Target Start/End: Original strand, 43187576 - 43187665
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 369  Q
    ||||||||||||||||||||||||||||| |||||| || |||||||||||||||||  ||||||||   ||||||||||| ||| ||||    
T  43187576 aaagagtcttgattgaataccacaagactctttcataattaaaaagtcttttaaaatctcttagaatttcgatccaatacatccccctta 43187665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 284 - 360
Target Start/End: Complemental strand, 509661 - 509585
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||| || || |||| | ||||||||||    
T  509661 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatccaataca 509585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 370
Target Start/End: Complemental strand, 21067845 - 21067759
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaa 370  Q
    |||||||||||||||||||||||||||||||| || ||||| |||||||||||  | ||||||| | |||||||||| ||| |||||    
T  21067845 agtcttgattgaataccacaagactttttcataattaaaaaatcttttaaaatctcatagaatcctaatccaatacatcccccttaa 21067759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 47066828 - 47066770
Alignment:
Q  123 caaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 181  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47066828 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 47066770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 10617102 - 10617024
Alignment:
Q  63 atgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaa 141  Q
    ||||||| ||||||||||| ||  | ||||||| ||| ||||||||| |||||||||||||||||||| ||||||||||    
T  10617102 atgtttttatgaaagacttgttattactaaaatatcactagaaaatctcacaaaatccatcaaaatctaatttattaaa 10617024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 47066712 - 47066631
Alignment:
Q  280 aaagagtcttgattgaataccacaagact-ttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    ||||||| ||||||||||||||||||||| ||||||| || |||||||||||| |||| || ||||||| | ||||||||||    
T  47066712 aaagagttttgattgaataccacaagacttttttcataattaaaaagtctttttaaatcccatagaatcctaatccaataca 47066631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 3634292 - 3634240
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  3634292 agtcttgattgaatatcacaagacttttttataataaaaaagtcttttaaaat 3634240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 360
Target Start/End: Original strand, 37973011 - 37973087
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    ||||||||||||||||||||||||| |||||| || ||||||| |||||||||  | ||||||| | ||||||||||    
T  37973011 agtcttgattgaataccacaagactctttcataattaaaaagtattttaaaatctcatagaatcctaatccaataca 37973087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 447913 - 447854
Alignment:
Q  117 atccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccac 176  Q
    |||||||||||||  ||| ||||||||||| |||||||||||||||||||| ||||||||    
T  447913 atccatcaaaatccaattaattaaacaatcattcgaaatttgaatgattttaaataccac 447854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 358
Target Start/End: Complemental strand, 29585524 - 29585446
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaata 358  Q
    ||||| ||||||||||||||||||| |||||||||| || ||||| |||||||||||  | ||||||||| || |||||    
T  29585524 aaagaatcttgattgaataccacaaaactttttcataattaaaaaatcttttaaaatctcgtagaatcataattcaata 29585446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 21066861 - 21066806
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcc 339  Q
    ||||||||||||||||||||| ||||||| ||  | ||||||||||||||||||||    
T  21066861 agtcttgattgaataccacaaaacttttttatttttaaaaagtcttttaaaattcc 21066806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 34115478 - 34115530
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||||||||||||| |||||| ||||| || || |||||||||||||||||    
T  34115478 agtcttgattgaatactacaagatttttttatcattaaaaagtcttttaaaat 34115530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 46037355 - 46037407
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||| ||| | ||||||| || ||||||||||||||||||||    
T  46037355 agtcttgattgaatatcactaaactttttaattataaaaaagtcttttaaaat 46037407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 312
Target Start/End: Original strand, 7718512 - 7718543
Alignment:
Q  281 aagagtcttgattgaataccacaagacttttt 312  Q
    ||||||||||||||||||||||||||||||||    
T  7718512 aagagtcttgattgaataccacaagacttttt 7718543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 336
Target Start/End: Original strand, 27418649 - 27418699
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||||||||||  |  | ||||||||||||||||||    
T  27418649 tcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaat 27418699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 17001049 - 17001081
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttc 85  Q
    |||||||||||| ||||||||||||||||||||    
T  17001049 aagaaatctcatattttcatgaaagactttttc 17001081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 35090115 - 35090163
Alignment:
Q  288 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||||||||  |  | ||||||||||||||||||    
T  35090115 ttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaat 35090163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 40097173 - 40097121
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||||||||||||||  |||||||||| |  | ||||||||||||||||||    
T  40097173 agtcttgattgaatacctaaagacttttttaaaacaaaaaagtcttttaaaat 40097121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 225; Significance: 1e-124; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 16 - 364
Target Start/End: Complemental strand, 21222377 - 21222030
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  21222377 gagagatagtaaaatcttaaaagaaaataacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactaaaaaatcccacaa 21222278  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       ||||||||||||||||||||||||||     
T  21222277 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatacctctagactttttttaagtgattaagagtcttgattgaatac 21222178  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    ||||||||       |||||||||||||||||||||||||||||||| ||       |||||| ||||||||||||||||||||||||||||||||||||    
T  21222177 cacaagactttttttaaatgacaaagaatcttgattgaataacacaa-actttttttaaattgaaaagagtcttgattgaataccacaagactttttcat 21222079  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||    
T  21222078 gataaaaaagccttttaaaatcccttagaatcatgatccaatacacccc 21222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 364
Target Start/End: Original strand, 49198222 - 49198585
Alignment:
Q  1 agagaagggaggagagagaga--tagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttc 98  Q
    |||||||||||||||||||||  ||||||||| |||||||       |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  49198222 agagaagggaggagagagagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatatcatgttttcatgaaagactttttcatgctaaaatttc 49198321  T
Q  99 agtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaa 198  Q
    | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||       ||||||||||    
T  49198322 actagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactgaactttttttaagtgattaa 49198421  T
Q  199 gagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaata 298  Q
    ||||||| |||||||| ||||| ||       |||||||||||||||||||||||||||||||||||       |||||| |||||||||||||||||||    
T  49198422 gagtctt-attgaataccacaaaactttttttaaatgacaaagaatcttgattgaataacacaagac-ttttttaaattgaaaagagtcttgattgaata 49198519  T
Q  299 ccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49198520 ccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 49198585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 16 - 364
Target Start/End: Original strand, 50192520 - 50192869
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  50192520 gagagatagtaaaatcttaaaagaaaaaaacaatcctaaaaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 50192619  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaata 214  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||    
T  50192620 aatccatcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaata 50192719  T
Q  215 tcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttca 314  Q
     ||||||||       ||||||||| ||||||||||||||||||||||||        |||||||||||| |||||||||||||||||||||||||||||    
T  50192720 ccacaagacttttttaaaatgacaaggaatcttgattgaataacacaagattttttttaaattggaaagaatcttgattgaataccacaagactttttca 50192819  T
Q  315 tgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    | |||||||||||||||||||||||||||||||||||| |||||||||||    
T  50192820 taataaaaaagtcttttaaaattccttagaatcatgattcaatacacccc 50192869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 46 - 364
Target Start/End: Complemental strand, 35279872 - 35279554
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||| |||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  35279872 caattctaagaaatctcatgttttcatgaaagactttttcatgttgaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 35279773  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    |||||||||||| |||||||||||||||||||||||       |||||||||| ||||||||||||||| ||||||||       |||||||||||||||    
T  35279772 ccttcgaaatttaaatgattttgaataccactagactttttttaagtgattaatagtcttgattgaataccacaagactttttttaaatgacaaagaatc 35279673  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    |||||||||||||||||| |       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  35279672 ttgattgaataacacaagtctttttttaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatctcttagaa 35279573  T
Q  346 tcatgatccaatacacccc 364  Q
    |||||||||||||||||||    
T  35279572 tcatgatccaatacacccc 35279554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 16 - 369
Target Start/End: Original strand, 45759979 - 45760333
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       ||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||    
T  45759979 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatcaaatactttttcatgctaaaatttcactagaaaatcccacaa 45760078  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||||     
T  45760079 aatccatcaaaatctgatttattaaacaatccttcgaagtttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatac 45760178  T
Q  216 cacaagacnnnnnnnaaa-tgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttca 314  Q
    |||| |||       ||| ||||||||||||||||||||||||||||||||       |||||| ||||||| |||||||||||||||||||||||||||    
T  45760179 cacatgactttttttaaattgacaaagaatcttgattgaataacacaagactttttttaaattgaaaagagttttgattgaataccacaagactttttca 45760278  T
Q  315 tgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 369  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  45760279 tgataaaaaaatcttttaaaatcccttagaatcatgatccaatacacccccctta 45760333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 19 - 364
Target Start/End: Original strand, 28824346 - 28824690
Alignment:
Q  19 agatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaat 118  Q
    |||||||||||| |||||||       |||||||||||||||||||||||| || ||||||||||||||| |||||||||  ||||||||||||||||||    
T  28824346 agatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttataaaagactttttcatgttaaaatttccctagaaaatcccacaaaat 28824445  T
Q  119 ccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcac 218  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||| |||    
T  28824446 ccatcaaaatctgatttattaaacaatc-ttcgaaatttgaatgattttgaataccacaagactgtttttaagtgattaagagtcttgattgaataccac 28824544  T
Q  219 aagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgat 318  Q
    |||||       |||||||||| ||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||    
T  28824545 aagactttttttaaatgacaaataatcttgattgaataacacaagactttttttaaattagaaagagtcttgattgaataccacaagactttttcatgat 28824644  T
Q  319 aaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  28824645 aaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 28824690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 16 - 361
Target Start/End: Original strand, 47654321 - 47654669
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       ||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||| ||||||    
T  47654321 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaatactttttcatgctaaaatttccctagaaaattccacaa 47654420  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaata 214  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||        |||||||||||||| |||||||||||    
T  47654421 aatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacttttttttaagtgattaagagttttgattgaata 47654520  T
Q  215 tcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacac-aagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttc 313  Q
     ||||||||       |||||||||||||||||||||||||||||| |||||       |||||||||||||||||||| ||||||||||||||||||||    
T  47654521 ccacaagacttcttttaaatgacaaagaatcttgattgaataacacaaagactttttttaaattggaaagagtcttgatcgaataccacaagactttttc 47654620  T
Q  314 atgat-aaaaaagtcttttaaaattccttagaatcatgatccaatacac 361  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  47654621 atgataaaaaaagtcttttaaaatcccttagaatcatgatccaatacac 47654669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 46 - 364
Target Start/End: Original strand, 6304252 - 6304572
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  6304252 caatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 6304351  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagag-tcttgattgaatatcacaagacnnnnnnnaaatgacaaagaat 244  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||| | ||| ||||||| ||||||||       ||||||||||||||    
T  6304352 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtttttggttgaataccacaagactttttttaaatgacaaagaat 6304451  T
Q  245 cttgattgaataacacaagac-nnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttag 343  Q
    |||||||||||||||||  ||        |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||    
T  6304452 cttgattgaataacacagtacttttttttaaattggaaatagtcttgattgaataccacaagactttttcatgaaaaaaaagtcttttaaaatcctttag 6304551  T
Q  344 aatcatgatccaatacacccc 364  Q
    |||||||||||||||||||||    
T  6304552 aatcatgatccaatacacccc 6304572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 51 - 364
Target Start/End: Complemental strand, 49418279 - 49417966
Alignment:
Q  51 ctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttc 150  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||     
T  49418279 ctaagaaatctcatattttcatgaaagattttttcatgctaaaatttcaatagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttt 49418180  T
Q  151 gaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgat 250  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||| |||||||| ||||  |        ||||||||| ||||||||||    
T  49418179 gaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttaattgaataccacataattttttttaaatgacaatgaatcttgat 49418080  T
Q  251 tgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatg 350  Q
    |||||||||||||||       |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||  ||||||||||||    
T  49418079 tgaataacacaagactttttctaaattggaaagagtcttgattgaatatcacatgactttttcatgataaaaaagtcttttaaaatctcttagaatcatg 49417980  T
Q  351 atccaatacacccc 364  Q
    |||||||| |||||    
T  49417979 atccaatatacccc 49417966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 16 - 312
Target Start/End: Original strand, 19451778 - 19452074
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19451778 gagagatagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 19451877  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| ||||     
T  19451878 aatccatcaaaatctgatttattaaacgatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattaaatac 19451977  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagacttttt 312  Q
    ||||||||       |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||    
T  19451978 cacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagacttttt 19452074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 46 - 363
Target Start/End: Original strand, 35679128 - 35679445
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||||||    
T  35679128 caatcttaagaaatctcatgtcttcatgaaagactttttcatgctaaaatttcactagaaaatcccatcaaatccatcaaaatctgatttattaaacaat 35679227  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    |||||||||||||||||||||||||||||||  |||       ||||||||||||||||||||||||||  ||||||        |||||||||||||||    
T  35679228 ccttcgaaatttgaatgattttgaataccacatgactttttttaagtgattaagagtcttgattgaatactacaagattttttttaaatgacaaagaatc 35679327  T
Q  246 ttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 345  Q
    ||||||||||| ||||||||       |||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||    
T  35679328 ttgattgaataccacaagactttttttaaattgaaaagagccttgattgaataccacaagactttttcattataaaaaagtcttttaaaatcccttaaaa 35679427  T
Q  346 tcatgatccaatacaccc 363  Q
    ||||||| ||||||||||    
T  35679428 tcatgattcaatacaccc 35679445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 81 - 364
Target Start/End: Complemental strand, 730314 - 730031
Alignment:
Q  81 ttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactaga 180  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||    
T  730314 ttttcatgctaaaatttcactagaaaatctcacaaaatccatcaaaatctgatttattaaacaattcgtcgaaatttgaatgattttgaataccactaga 730215  T
Q  181 cnnnnnnn-aagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattgg 279  Q
    |        |||||||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||       |||||||    
T  730214 cttttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattgg 730115  T
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  730114 aaagagtcttgattgaataccacaagactttttcatga-aaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 730031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 46 - 348
Target Start/End: Complemental strand, 29556305 - 29556006
Alignment:
Q  46 caatcctaagaaatctcatgt-tttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaa 144  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||    
T  29556305 caatcctaagaaatctcatgtgtttcataaaagactttttcaagctaaaatttcattagaaaatcccataaaatccatcaaaatctaatttattaaacaa 29556206  T
Q  145 tccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaat 244  Q
    || ||||||||||||||||||||||||| |||||||        |||||||||||||||||||||||||| ||||||||       |||| |||| ||||    
T  29556205 tctttcgaaatttgaatgattttgaataacactagattttttttaagtgattaagagtcttgattgaataacacaagactttttttaaataacaatgaat 29556106  T
Q  245 cttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttaga 344  Q
    ||| |||||||||||||||||       |||||| ||||||||||||||||||||||||| |||||||    |||||||||||||||||||| |||||||    
T  29556105 cttaattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccacaaaacttttt----ataaaaaagtcttttaaaatcccttaga 29556010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 46 - 304
Target Start/End: Complemental strand, 45536150 - 45535886
Alignment:
Q  46 caatcctaagaaatctcatgttttc------atgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttatta 139  Q
    |||||||||||||||||||||||||      ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  45536150 caatcctaagaaatctcatgttttcgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttatta 45536051  T
Q  140 aacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaa 239  Q
    ||||||| ||||||||||||||||||||||||||||||||||       ||| |||||||||||||||||||||| ||||| ||       |||||||||    
T  45536050 aacaatctttcgaaatttgaatgattttgaataccactagactttttttaagcgattaagagtcttgattgaataccacaacactttgtttaaatgacaa 45535951  T
Q  240 agaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaa 304  Q
    ||||| ||||||||||||||||||||       |||||||||||||||||||||||||| |||||    
T  45535950 agaatattgattgaataacacaagactttttttaaattggaaagagtcttgattgaatatcacaa 45535886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 53 - 360
Target Start/End: Complemental strand, 6312767 - 6312460
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  6312767 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 6312668  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||||| |||| ||||    
T  6312667 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttaattg 6312568  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||| ||       |||||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  6312567 aataccacaaaactttttttaaattgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 6312468  T
Q  353 ccaataca 360  Q
    ||||||||    
T  6312467 ccaataca 6312460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 29396395 - 29396702
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  29396395 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 29396494  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  29396495 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 29396594  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| || ||||        |||||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  29396595 aataccaaaagattttttttaaattgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaataccatagaatcctaat 29396694  T
Q  353 ccaataca 360  Q
    ||||||||    
T  29396695 ccaataca 29396702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 75 - 358
Target Start/End: Complemental strand, 48524490 - 48524208
Alignment:
Q  75 aagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatacc 174  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||| || ||||||||||||||| ||| ||||||||||||||||||||| |    
T  48524490 aagactttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaaactgatttattaaacaatctttcaaaatttgaatgattttgaatatc 48524391  T
Q  175 actagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaa 274  Q
    || ||||       |||||||||||||| |||||| |||| |||| ||        |||||||||| ||||||||||||||||||||||||       ||    
T  48524390 acaagactttttttaagtgattaagagttttgattaaataccacatgaatttttttaaatgacaaaaaatcttgattgaataacacaagactttttttaa 48524291  T
Q  275 attggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaata 358  Q
    |||||||||||||||||||||||||  ||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  48524290 attggaaagagtcttgattgaatactgcaaaacttttttatgat-aaaaagtcttttaaaattccttagaatcatgatccaata 48524208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 16 - 312
Target Start/End: Complemental strand, 47780941 - 47780644
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||| ||||||||| |||||||       ||||| ||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||    
T  47780941 gagaggtagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaaaactttttcatgttaaaatttcactagaaaatcccacaa 47780842  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||||||  || |||||||||||||||||| ||||||||       ||||||||||||||||||||||||||     
T  47780841 aatccatcaaaatctgatttattaaacaatccttttaattttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaatac 47780742  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagac-nnnnnnnaaattggaaagagtcttgattgaataccacaagacttttt 312  Q
    |||| |||       |||||||| | ||||||||||||||||||||||||        |||||| ||||||||||||||||||| |||||||||||||    
T  47780741 cacatgactttttttaaatgacatataatcttgattgaataacacaagacttttttttaaattgaaaagagtcttgattgaataacacaagacttttt 47780644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 1 - 360
Target Start/End: Original strand, 9577390 - 9577746
Alignment:
Q  1 agagaagggaggagagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcag 100  Q
    ||||||| ||||||| ||||| ||||||||||||||||       |||||| |||||||||||||||||||||||||| |||||||| |||||||||||     
T  9577390 agagaagagaggaga-agagagagtaaaattttaaaagaaaaa--caatcccaagaaatctcatgttttcatgaaagattttttcattctaaaatttcac 9577486  T
Q  101 tagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaaga 200  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| ||| ||||       ||||||| || |    
T  9577487 tagaaaatctcacaaaatccatcaaaatccaatttattaaacaatccttctaaatttgaatgattttgaatatcacaagactttttttaagtgataaaaa 9577586  T
Q  201 gtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaatacc 300  Q
    || |||||| |||||| ||||||       |||||||||||  |||||||||||||  |||| ||       || ||| ||| |||||||||||||||||    
T  9577587 gttttgatttaatatctcaagacttttttaaaatgacaaagggtcttgattgaatacaacaatactttttttaagttgcaaatagtcttgattgaatacc 9577686  T
Q  301 acaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||| |||||||||| || ||||||||||||||||| |||| ||||| | ||||||||||    
T  9577687 acaaaactttttcatcattaaaaagtcttttaaaatcccttcgaatcctaatccaataca 9577746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 53 - 360
Target Start/End: Complemental strand, 25612350 - 25612043
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || |||||||  | || ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  25612350 aagaaatctcatcttttcatgaaagactttttcttgttaaaattatactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 25612251  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       || |||| || | ||||||||||||| | ||||||       |||||||||||| |||||||||    
T  25612250 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 25612151  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       |||||| ||| ||||||||||||||||||||||| |||||||| || ||||||||||||||||| || ||||||| | ||    
T  25612150 aataccacaagactttttttaaattgcaaaaagtcttgattgaataccacaagattttttcataattaaaaagtcttttaaaatcccatagaatcctaat 25612051  T
Q  353 ccaataca 360  Q
    ||||||||    
T  25612050 ccaataca 25612043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 56 - 377
Target Start/End: Original strand, 32588963 - 32589285
Alignment:
Q  56 aaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaat 155  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||  ||||||||||||||||||| ||||    
T  32588963 aaatctcatgttttcatgaaagacttttttatgctaaaatttcactagaaaatctcacaaaatccatcaaaatccgatttattaaacaatccttcaaaat 32589062  T
Q  156 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaat 255  Q
    ||||||||||||||||||||| ||||       ||||||| |||||||||||||||||  |||||||         ||||| ||||| ||||||||||||    
T  32589063 ttgaatgattttgaataccacaagacttcttttaagtgatgaagagtcttgattgaatgccacaagattcttgtttaatgataaagagtcttgattgaat 32589162  T
Q  256 aacacaagacnnnnnnnaaa-ttggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatcc 354  Q
    | || ||||        ||| ||| |||||||||||||||||||| |||  ||||||||||||||||||||| |||||||||  | ||||||||| ||||    
T  32589163 accagaagattttttttaaagttgaaaagagtcttgattgaatacaacataactttttcatgataaaaaagttttttaaaatctcatagaatcataatcc 32589262  T
Q  355 aatacaccccacttaatcatttt 377  Q
    |||||| ||| || |||| ||||    
T  32589263 aatacatccccctaaatcctttt 32589285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 46 - 364
Target Start/End: Complemental strand, 33025703 - 33025394
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||          ||||| || |||||||||||    
T  33025703 caatcataagaaatctcatgttttcatgaaagactttttcatgctaaaattttattagaaaatcccacaa----------aatctgatgtattaaacaat 33025614  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagag-tcttgattgaatatcacaagacnnnnnnnaaatgacaaagaat 244  Q
    ||||| ||||||||||||||||||||||||| ||||       ||||||||||||| | ||||||||||| |||||||        ||||| ||||||||    
T  33025613 ccttcaaaatttgaatgattttgaataccacaagactttttttaagtgattaagagtttttgattgaataccacaagaatttttaaaaatgtcaaagaat 33025514  T
Q  245 cttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttaga 344  Q
    ||||||||||||| |||| ||       ||||||||||   | ||||||||||||||||||| ||||||||||||||||||||||||||| |  ||||||    
T  33025513 cttgattgaataagacaaaactttttttaaattggaaaattttttgattgaataccacaagattttttcatgataaaaaagtcttttaaattctcttaga 33025414  T
Q  345 atcatgatccaatacacccc 364  Q
    ||||||||||||||||||||    
T  33025413 atcatgatccaatacacccc 33025394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 15835060 - 15835367
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||| ||||||||||||||||  |||||||||||||||||| |     
T  15835060 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatcctttgc 15835159  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| |||        || |||| |  ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  15835160 aatttgaatgattttgaataccacaagattttttttaaatgatgagaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 15835259  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       |||||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  15835260 aataccacaagactttttttaaattgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 15835359  T
Q  353 ccaataca 360  Q
    ||||||||    
T  15835360 ccaataca 15835367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 54 - 357
Target Start/End: Complemental strand, 46328234 - 46327931
Alignment:
Q  54 agaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaa 153  Q
    |||||||| || |||| ||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||| ||||||||||||||||||    
T  46328234 agaaatcttatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattaattaaacaatccttcgaa 46328135  T
Q  154 atttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattga 253  Q
    ||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       |||||||||||| ||||||||||    
T  46328134 atttgaatgattttgaataccacgagactttttgtaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattga 46328035  T
Q  254 ataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatc 353  Q
    ||| ||||||||       || ||| ||| ||| ||||||||||| |||||||||||||||| || ||||||||||||||||| || ||||||| | |||    
T  46328034 ataccacaagactttttttaagttgcaaaaagttttgattgaataacacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatc 46327935  T
Q  354 caat 357  Q
    ||||    
T  46327934 caat 46327931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 159 - 369
Target Start/End: Complemental strand, 22183457 - 22183247
Alignment:
Q  159 aatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataac 258  Q
    |||||||||||||||||||||||       |||||||||||| ||||||||||||| ||||||||       ||||||||||||||||||||||||||||    
T  22183457 aatgattttgaataccactagactttttttaagtgattaagaatcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataac 22183358  T
Q  259 acaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaata 358  Q
    |||| ||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  22183357 acaaaactttttttaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcctttagaatcatgatccaata 22183258  T
Q  359 caccccactta 369  Q
    |||||| ||||    
T  22183257 cacccccctta 22183247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 53 - 371
Target Start/End: Original strand, 28387400 - 28387718
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  | || ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  28387400 aagaaatctcatctttttatgaaagacttttttttgttaaaattaaactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 28387499  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    ||||||||||| |||||||||||| |||        || |||| || ||||||||||||||| | ||||||       ||||||||||||||||||||||    
T  28387500 aatttgaatgaatttgaataccacaagattttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagaatcttgattg 28387599  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| || |||||       |||||| ||| |||||||||||||||||| ||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  28387600 aataccaaaagactttttttaaattgcaaaaagtcttgattgaataccataagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 28387699  T
Q  353 ccaatacaccccacttaat 371  Q
    |||||| | ||| ||||||    
T  28387700 ccaataaatcccccttaat 28387718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 189 - 364
Target Start/End: Complemental strand, 953876 - 953701
Alignment:
Q  189 aagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtct 288  Q
    |||||||||||||||||||| ||||| ||||||||       |||||||||||||||||||||||||||||||||||       ||||||||||||||||    
T  953876 aagtgattaagagtcttgatcgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtct 953777  T
Q  289 tgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  953776 tgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 953701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 56 - 312
Target Start/End: Complemental strand, 51701770 - 51701514
Alignment:
Q  56 aaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaat 155  Q
    ||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  51701770 aaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 51701671  T
Q  156 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaat 255  Q
    ||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||||| ||||||||||||    
T  51701670 ttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 51701571  T
Q  256 aacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagacttttt 312  Q
    | ||||||||       |||||| ||| ||||||||||||||||||||| |||||||    
T  51701570 accacaagactatttttaaattgcaaaaagtcttgattgaataccacaaaacttttt 51701514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 9322507 - 9322814
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||| |||||||||||||||   ||||||||||||||||||| |    
T  9322507 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatccttcta 9322606  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    ||||||||||||||||||||||||  |||       || |||| || ||||||||| ||||| | ||||||       |||||||||||| |||||||||    
T  9322607 aatttgaatgattttgaataccacaggactttttttaaatgatgaaaagtcttgatcgaatacctcaagacttttttaaaatgacaaagagtcttgattg 9322706  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| |||||          |||||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  9322707 aataccacaaatttttttttaaattgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 9322806  T
Q  353 ccaataca 360  Q
    ||||||||    
T  9322807 ccaataca 9322814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 48177469 - 48177776
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  48177469 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 48177568  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||||||| || | | ||||||||||| | ||||||       |||||||||||| | |||||||    
T  48177569 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaaattttgattgaatacctcaagacttttttaaaatgacaaagagtattgattg 48177668  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| |||||||        || ||| ||| |||||||||||||||||||||||||||||||| || |||||   ||||||||| || ||||||| | ||    
T  48177669 aataccacaagattttttttaagttgcaaaaagtcttgattgaataccacaagactttttcataattaaaaaacattttaaaatcccatagaatcttaat 48177768  T
Q  353 ccaataca 360  Q
    ||||||||    
T  48177769 ccaataca 48177776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 31572152 - 31572327
Alignment:
Q  1 agagaagggaggagagagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcag 100  Q
    |||||||  |||| ||||||| |||||||| |||||||       |||| ||||||||||||||| ||||||||||||||||||||| |||||||||||     
T  31572152 agagaagtaaggaaagagagagagtaaaatcttaaaagaaaaaaacaattctaagaaatctcatgatttcatgaaagactttttcatcctaaaatttcac 31572251  T
Q  101 tagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccac 176  Q
    || ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  31572252 tataaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttaaatgattttgaataccac 31572327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 53 - 360
Target Start/End: Complemental strand, 29219469 - 29219174
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| ||          | ||||||||||||||||||  |||||||||||||||||||      
T  29219469 aagaaatctcatcttttcatgaaatactttttcttgttaaaattaca----------ctacaaaatccatcaaaatccaatttattaaacaatccttctt 29219380  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| ||||||       |||||||  ||| |||||||||    
T  29219379 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatatctcaagacttttttaaaatgac--agagtcttgattg 29219282  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       || ||| ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||| || |||| | ||    
T  29219281 aataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaattccatataatcctaat 29219182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 46 - 265
Target Start/End: Original strand, 37014640 - 37014859
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||   |||||| |||||||    
T  37014640 caatcttaagaaatctcatgtttttatgagagactttttcatgctaaaatttcactagaaaatccgacaaaatccatcaaaattcaatttataaaacaat 37014739  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    | || |||||||||||||||||||||| ||| ||||       ||||||| |||| | ||||||||||| ||||||||       |||||||||||| ||    
T  37014740 ctttagaaatttgaatgattttgaatatcacaagactttttttaagtgatgaagaatattgattgaataccacaagacttcttctaaatgacaaagagtc 37014839  T
Q  246 ttgattgaataacacaagac 265  Q
    || |||||||| ||||||||    
T  37014840 ttaattgaataccacaagac 37014859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 231 - 369
Target Start/End: Complemental strand, 14494224 - 14494089
Alignment:
Q  231 aaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttt 330  Q
    |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14494224 aaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagattttttcatgataaaaaagtcttt 14494125  T
Q  331 taaaattccttagaatcatgatccaatacaccccactta 369  Q
    |||    ||||||||||||||||||||||||||| ||||    
T  14494124 taa---cccttagaatcatgatccaatacacccccctta 14494089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 238 - 364
Target Start/End: Original strand, 19452042 - 19452168
Alignment:
Q  238 aaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatt 337  Q
    ||||| ||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  19452042 aaagagtcttgattgaataccacaagactttttttaaattggaaagagtcttgattgaataccacaagactttttcaagataaaaaagtcttttaaaatc 19452141  T
Q  338 ccttagaatcatgatccaatacacccc 364  Q
    |||||||||||||||||||||||||||    
T  19452142 ccttagaatcatgatccaatacacccc 19452168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 132 - 360
Target Start/End: Complemental strand, 49231000 - 49230772
Alignment:
Q  132 atttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnna 231  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       |    
T  49231000 atttattaaataatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaa 49230901  T
Q  232 aatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtctttt 331  Q
    ||||||||||| ||||||||||||| ||||||||       || ||| ||| |||||||||||||||||||| ||||||||||| || ||||||||||||    
T  49230900 aatgacaaagagtcttgattgaataccacaagactttttttaatttgcaaaaagtcttgattgaataccacatgactttttcataattaaaaagtctttt 49230801  T
Q  332 aaaattccttagaatcatgatccaataca 360  Q
    ||||| || || |||| | ||||||||||    
T  49230800 aaaatcccataaaatcctaatccaataca 49230772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 123 - 357
Target Start/End: Complemental strand, 18798614 - 18798380
Alignment:
Q  123 caaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaaga 222  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||| | |||||    
T  18798614 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaaga 18798515  T
Q  223 cnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaa 322  Q
    |       |||||||||||| ||||||||||||| ||||||||       || ||| ||| |||||||||||||||||||||||| ||||||| || |||    
T  18798514 cttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagacattttcataattaaa 18798415  T
Q  323 aagtcttttaaaattccttagaatcatgatccaat 357  Q
    ||||||||||||||  | ||||||| | |||||||    
T  18798414 aagtcttttaaaatctcatagaatcctaatccaat 18798380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 57 - 360
Target Start/End: Original strand, 5495117 - 5495410
Alignment:
Q  57 aatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatt 156  Q
    |||||||| ||||||| || ||||||||| || ||||||| || || ||||||||||||||||||          |||||||||| ||||||| ||||||    
T  5495117 aatctcatcttttcataaaggactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaataatcctttgaaatt 5495206  T
Q  157 tgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaata 256  Q
    | |||||||||||||||||| ||||       ||||||| || ||||||||||||||| | ||||||       |||||||||||| |||| ||||||||    
T  5495207 taaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttaattgaata 5495306  T
Q  257 acacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaa 356  Q
     ||||||||       || ||| ||| |||||||||||||||||||| ||||||||||| || ||||||| |||||||||  | ||||||| | ||||||    
T  5495307 ccacaagacttcctttaagttgcaaaaagtcttgattgaataccacatgactttttcataattaaaaagttttttaaaatctcatagaatcctaatccaa 5495406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 273 - 377
Target Start/End: Complemental strand, 47780592 - 47780488
Alignment:
Q  273 aaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaatc 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||  || ||||    
T  47780592 aaattgaaaagagtcttgattgaataccacaagactttttcatgataaaaaaatcttttaaaatttcttagaatcatgatccaatacaccctcctaaatc 47780493  T
Q  373 atttt 377  Q
    |||||    
T  47780492 atttt 47780488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 53 - 265
Target Start/End: Original strand, 38536106 - 38536308
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || ||          |||||||||||||||||  |||||||||||||||||| ||    
T  38536106 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatcctttga 38536195  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    ||||||||| |||||||||||||| ||||       |||| || || ||||||||||||||| | ||| ||       |||||||||||| |||||||||    
T  38536196 aatttgaataattttgaataccacaagacttttgttaagtaatgaaaagtcttgattgaatacctcaaaacttttttaaaatgacaaagagtcttgattg 38536295  T
Q  253 aataacacaagac 265  Q
    |||| ||||||||    
T  38536296 aataccacaagac 38536308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 53 - 265
Target Start/End: Original strand, 38558324 - 38558526
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || ||          |||||||||||||||||  |||||||||||||||||| ||    
T  38558324 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatcctttga 38558413  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    ||||||||| |||||||||||||| ||||       |||| || || ||||||||||||||| | ||| ||       |||||||||||| |||||||||    
T  38558414 aatttgaataattttgaataccacaagacttttgttaagtaatgaaaagtcttgattgaatacctcaaaacttttttaaaatgacaaagagtcttgattg 38558513  T
Q  253 aataacacaagac 265  Q
    |||| ||||||||    
T  38558514 aataccacaagac 38558526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 189 - 360
Target Start/End: Original strand, 8141271 - 8141442
Alignment:
Q  189 aagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtct 288  Q
    ||||||| || ||||||||||||||| | ||||||       |||||||||||| ||||||||||||| ||||| ||       || ||| ||| |||||    
T  8141271 aagtgatgaatagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaaaactttttttaagttgcaaaaagtct 8141370  T
Q  289 tgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | || |||||||    
T  8141371 tgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaattcaataca 8141442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 273 - 353
Target Start/End: Original strand, 31572390 - 31572470
Alignment:
Q  273 aaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatc 353  Q
    |||||||||  ||| |||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  31572390 aaattggaagaagttttgaatgaataccacaagactttttcatgataaaaaagtctcttaaaatcccttagaatcatgatc 31572470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 123 - 360
Target Start/End: Complemental strand, 45272708 - 45272473
Alignment:
Q  123 caaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaaga 222  Q
    |||||||  |||||||||||| ||||||||||||| ||| |||||||||||||| |||        ||||||| || ||||||||||||||| | |||||    
T  45272708 caaaatccaatttattaaaca-tccttcgaaatttaaataattttgaataccacgagattttttttaagtgatgaaaagtcttgattgaatacctcaaga 45272610  T
Q  223 cnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaa 322  Q
    |       |||||||||||| | |||||||||||  ||||||        || ||| ||| |||||| |||||||||||||| | |||||||| || |||    
T  45272609 cttttta-aaatgacaaagagttttgattgaatacaacaagattttttttaagttgcaaaaagtctttattgaataccacaatattttttcataattaaa 45272511  T
Q  323 aagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||||||||||||| || ||||||| | ||||||||||    
T  45272510 aagtcttttaaaatcccatagaatcttaatccaataca 45272473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 955882 - 955823
Alignment:
Q  114 aaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatac 173  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  955882 aaaatccatcaaaatctgatttattaaacaacccttcgaaatttgaatgattttgaatac 955823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 48668785 - 48668905
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||||| || ||||||||| |||||||||||||||||||| || ||||||| || || | ||||||||||||||||          ||||||||||||||    
T  48668785 caatcccaacaaatctcatcttttcatgaaagactttttcttgttaaaattacactacagaatcccacaaaatcca----------atttattaaacaat 48668874  T
Q  146 ccttcgaaatttgaatgattttgaataccac 176  Q
    | |||||||||||||| ||||||||||||||    
T  48668875 ctttcgaaatttgaataattttgaataccac 48668905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 51085951 - 51085860
Alignment:
Q  90 taaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 181  Q
    ||||||||||  ||||||| ||||||||| ||||||||||  ||||||| || |||||||| |||||||||| |||||||||||||| ||||    
T  51085951 taaaatttcacaagaaaattccacaaaattcatcaaaatccaatttatttaataatccttcaaaatttgaattattttgaataccacgagac 51085860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 19007584 - 19007641
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||    
T  19007584 agtcttgattgaataccactagactttttcattataaaaaagtcttttaaaatccctt 19007641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 353
Target Start/End: Original strand, 25831144 - 25831213
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatc 353  Q
    |||||| |||||||| || |||| |||||||| || ||||||||||||||||||||||||||||||||||    
T  25831144 agtcttaattgaatatcaaaagattttttcataattaaaaagtcttttaaaattccttagaatcatgatc 25831213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 358
Target Start/End: Complemental strand, 42290802 - 42290732
Alignment:
Q  288 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaata 358  Q
    |||||||||||||||||||||||||||| || ||||| ||||||||||| || ||||||| | ||||||||    
T  42290802 ttgattgaataccacaagactttttcataattaaaaaatcttttaaaatcccatagaatcttaatccaata 42290732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 48194669 - 48194612
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||| ||||    
T  48194669 agtcttgattgaataccactagactttttcattctaaaaaagtcttttaaaatccctt 48194612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 48203427 - 48203370
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||| ||||    
T  48203427 agtcttgattgaataccactagactttttcattctaaaaaagtcttttaaaatccctt 48203370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 38536281 - 38536337
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||||||||||||||||| || |  |||||||||||||||||    
T  38536281 aaagagtcttgattgaataccacaagacttttttataaataaaaagtcttttaaaat 38536337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 38558499 - 38558555
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||||||||||||||||| || |  |||||||||||||||||    
T  38558499 aaagagtcttgattgaataccacaagacttttttataaataaaaagtcttttaaaat 38558555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 42657793 - 42657741
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||||||||||||| || || |||||||||||||||||    
T  42657793 agtcttgattgaataccacaagacttttttataattaaaaagtcttttaaaat 42657741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 28541437 - 28541386
Alignment:
Q  313 catgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  28541437 catgataaaaaaatcttttaaaatcgcttagaatcatgatccaatacacccc 28541386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 156
Target Start/End: Complemental strand, 38320098 - 38319996
Alignment:
Q  54 agaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatccc-acaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||| |||| |||||||||||||||||||  |||||||| |||| || |||| ||| |||||||| ||||||||| |||||| ||||||||| ||| |    
T  38320098 agaaatatcatattttcatgaaagacttttttgtgctaaaa-ttcactaaaaaaacccaacaaaatctatcaaaatcctatttagtaaacaatcattcaa 38320000  T
Q  153 aatt 156  Q
    ||||    
T  38319999 aatt 38319996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 51826841 - 51826898
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 341  Q
    ||||||||||||||||||||||| ||||| || || ||||||||||||||||| ||||    
T  51826841 agtcttgattgaataccacaagatttttttattattaaaaagtcttttaaaatccctt 51826898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 14555316 - 14555368
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||| | ||||||| || ||||||||||||||||||||    
T  14555316 agtcttgattgaataccaccaaacttttttattataaaaaagtcttttaaaat 14555368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 47784444 - 47784363
Alignment:
Q  231 aaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagacttttt 312  Q
    |||||||||||| ||||||||||||| ||||||||       || ||| ||| ||||||||||||||| |||||||||||||    
T  47784444 aaatgacaaagagtcttgattgaataccacaagactttttttaacttgcaaaaagtcttgattgaatatcacaagacttttt 47784363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 363
Target Start/End: Complemental strand, 27198346 - 27198271
Alignment:
Q  288 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    ||||||||||||||||||||||||| || |  ||||||||||||||||| ||||| | ||   |||||||||||||    
T  27198346 ttgattgaataccacaagacttttttataaacaaaaagtcttttaaaatcccttaaagtctcaatccaatacaccc 27198271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 223
Target Start/End: Complemental strand, 47784542 - 47784410
Alignment:
Q  80 tttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactag 179  Q
    |||||||||||||||||| | ||||||||| |||||||||||          ||||||||||||||| || ||| ||||||| |||||||||||||| ||    
T  47784542 tttttcatgctaaaatttaactagaaaatctcacaaaatcca----------atttattaaacaatctttagaagtttgaataattttgaataccacaag 47784453  T
Q  180 acnnnnnnnaagtgattaagagtcttgattgaatatcacaagac 223  Q
    ||       || |||  |||||||||||||||||| ||||||||    
T  47784452 acttttttaaa-tgacaaagagtcttgattgaataccacaagac 47784410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 31622536 - 31622586
Alignment:
Q  123 caaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatac 173  Q
    |||||||  ||||||||||||||| || |||||||||||||||||||||||    
T  31622536 caaaatccgatttattaaacaatcttttgaaatttgaatgattttgaatac 31622586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 48524842 - 48524805
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttt 83  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  48524842 caatcctaacaaatctcatgttttcatgaaagactttt 48524805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 363
Target Start/End: Complemental strand, 19893526 - 19893451
Alignment:
Q  288 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    ||||||||||||  ||||| ||||| || || ||||||||||||||||| ||||| |||| | || ||||||||||    
T  19893526 ttgattgaatactccaagatttttttatcattaaaaagtcttttaaaatcccttaaaatcttaattcaatacaccc 19893451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 363
Target Start/End: Complemental strand, 34772390 - 34772311
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    ||||||||| ||||||||| | ||||||| ||  ||||||||||||||||||| | ||  |||||  |||||||||||||    
T  34772390 agtcttgatcgaataccaccaaacttttttattttaaaaaagtcttttaaaatcctttgaaatcacaatccaatacaccc 34772311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 18798663 - 18798621
Alignment:
Q  54 agaaatctcatgttttcatgaaagactttttcatgctaaaatt 96  Q
    ||||||||||| |||||||||||||||||||| || |||||||    
T  18798663 agaaatctcatcttttcatgaaagactttttcttgttaaaatt 18798621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 14229056 - 14229137
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaa-aagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||||||||||||||||| | ||||||| |  |||||| |||||||||||||| ||||  |||||  ||| ||||||||||    
T  14229056 agtcttgattgaataccactaaacttttttactataaaaaaagtcttttaaaatcccttgaaatcacaatcaaatacacccc 14229137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 1928409 - 1928461
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||||||||||||||  |||||||||| |  | ||||||||||||||||||    
T  1928409 agtcttgattgaatacctaaagacttttttaaaacaaaaaagtcttttaaaat 1928461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 10896879 - 10896827
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||||||||||||||  |||||||||| |  |||||||| |||||||||||    
T  10896879 agtcttgattgaatacctaaagacttttttaaaataaaaaaatcttttaaaat 10896827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 36402326 - 36402274
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||||||||||||||  |||||||||| |  | ||||||||||||||||||    
T  36402326 agtcttgattgaatacctaaagacttttttaaaacaaaaaagtcttttaaaat 36402274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 16 - 369
Target Start/End: Original strand, 15003 - 15353
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15003 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 15102  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||     
T  15103 aatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatac 15202  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
     |||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| ||||||||    
T  15203 tacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagattttttcat 15302  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 369  Q
    ||||||||||||||||||    ||||||||||||||||||||||||||| ||||    
T  15303 gataaaaaagtcttttaa---cccttagaatcatgatccaatacacccccctta 15353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 16 - 369
Target Start/End: Original strand, 15646 - 15996
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15646 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 15745  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||     
T  15746 aatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatac 15845  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
     |||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| ||||||||    
T  15846 tacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagattttttcat 15945  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 369  Q
    ||||||||||||||||||    ||||||||||||||||||||||||||| ||||    
T  15946 gataaaaaagtcttttaa---cccttagaatcatgatccaatacacccccctta 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 49 - 364
Target Start/End: Complemental strand, 100415 - 100100
Alignment:
Q  49 tcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatcct 148  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||| |||||||||||||||||||| | |||||||||||||||||    
T  100415 tcctaagaaatctcatgttttcatgaaagactttttcttgttaaaatttcactagaaaaacccacaaaatccatcaaaatttgatttattaaacaatcct 100316  T
Q  149 tcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttg 248  Q
    | |||||||||||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||       ||||||||||||||||||    
T  100315 ttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgagtaccacaagactttttttaaatgacaaagaatcttg 100216  T
Q  249 attgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatca 348  Q
    |||||||||||||||||       ||||||||||| || ||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||    
T  100215 attgaataacacaagactttttttaaattggaaagtgtgttgattgaatatcagaagactttttcatgataaaaaagtcttttaaaatcccttagaatca 100116  T
Q  349 tgatccaatacacccc 364  Q
    ||||||||||||||||    
T  100115 tgatccaatacacccc 100100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 144; Significance: 2e-75; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 47 - 313
Target Start/End: Original strand, 540 - 806
Alignment:
Q  47 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatc 146  Q
    |||||||||||||||||||||||| | |||||||||||||| | ||||||||| |||||||| ||||||||||||||||||| | |||||||||||||||    
T  540 aatcctaagaaatctcatgttttcgtcaaagactttttcataccaaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaaacaatc 639  T
Q  147 cttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatct 246  Q
    |||| ||||||||||||||||||||||||||| |        |||||||||||||| ||||||||||| ||||| ||       ||||||||||||||||    
T  640 cttccaaatttgaatgattttgaataccactaaaaaaaatttaagtgattaagagttttgattgaataccacaatactttttttaaatgacaaagaatct 739  T
Q  247 tgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttc 313  Q
    |||||||||||||||||||       |||||| ||||||||||||||||||||||||||||||||||    
T  740 tgattgaataacacaagactttttttaaattgtaaagagtcttgattgaataccacaagactttttc 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 142; Significance: 2e-74; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 38575 - 38781
Alignment:
Q  16 gagagatagtaaaattttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaa 115  Q
    ||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38575 gagagatagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa 38674  T
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||     
T  38675 aatccatcaaaatctga-ttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatac 38773  T
Q  216 cacaagac 223  Q
    ||||||||    
T  38774 cacaagac 38781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 281 - 363
Target Start/End: Original strand, 38755 - 38837
Alignment:
Q  281 aagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  38755 aagagtcttgattgaataccacaagactttttcatgataaaaatatcttttaaaatcccttagaatcatgatccaatacaccc 38837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 138; Significance: 6e-72; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 46 - 265
Target Start/End: Original strand, 38895 - 39114
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  38895 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 38994  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatc 245  Q
    ||||| ||||||||||||||||||||| ||||||||       ||||||||||||||||| |||||||| ||||||||       |||||| ||||||||    
T  38995 ccttccaaatttgaatgattttgaatatcactagacttcttttaagtgattaagagtctttattgaataccacaagactttttttaaatgataaagaatc 39094  T
Q  246 ttgattgaataacacaagac 265  Q
    ||||||||||| ||||||||    
T  39095 ttgattgaataccacaagac 39114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 280 - 364
Target Start/End: Original strand, 39087 - 39171
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  39087 aaagaatcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatccattagaatcatgatccaatacacccc 39171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 138; Significance: 6e-72; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 46 - 262
Target Start/End: Complemental strand, 102302 - 102084
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 145  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  102302 caatcataagaaatctcatatttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 102203  T
Q  146 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaaga--cnnnnnnnaaatgacaaagaa 243  Q
    | ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||  |       |||||||||||||    
T  102202 ctttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactctttttttaaatgacaaagaa 102103  T
Q  244 tcttgattgaataacacaa 262  Q
    |||||||||||||||||||    
T  102102 tcttgattgaataacacaa 102084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 280 - 363
Target Start/End: Complemental strand, 102108 - 102026
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 363  Q
    ||||| ||||||||||||| ||||| |||||||  | |||||||||||||||||||| |||||||||||||||| |||||||||    
T  102108 aaagaatcttgattgaataacacaaaactttttt-taataaaaaagtcttttaaaatcccttagaatcatgatctaatacaccc 102026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 53 - 360
Target Start/End: Complemental strand, 10760 - 10453
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||| |||||||||||||||   |||||||||||||||||| ||    
T  10760 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatcctttga 10661  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    |||||||||||||||||||||||| |||        || |||| |  ||||||||||||||| | ||||||       |||||||||||| |||||||||    
T  10660 aatttgaatgattttgaataccacaagattttttttaaatgatgagaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 10561  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 352  Q
    |||| ||||||||       |||||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||    
T  10560 aataccacaagactttttttaaattgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 10461  T
Q  353 ccaataca 360  Q
    ||||||||    
T  10460 ccaataca 10453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 53 - 360
Target Start/End: Complemental strand, 1063 - 756
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| |||| |||||||||||||||  | ||||||| || || |||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  1063 aagaaatctcatattttaatgaaagactttttctagttaaaattacactacaaaatcccacaaaatccatcaaaatc-tatttattaaataattcttcga 965  T
Q  153 aatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgatt 251  Q
    |||||||||||||||||||||||| ||||        ||||||| || ||||||||||||||| | || ||        |||||||||||| ||||||||    
T  964 aatttgaatgattttgaataccacaagacttttttttaagtgatgaaaagtcttgattgaatacctcatgatttttttaaaatgacaaagagtcttgatt 865  T
Q  252 gaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatga 351  Q
    ||||| ||||||||       || ||| ||| ||||||||||||||||||||||| |||||||| || ||||||||||||||||| || ||||||| | |    
T  864 gaataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagaatttttcataattaaaaagtcttttaaaatcccatagaatcctaa 765  T
Q  352 tccaataca 360  Q
    |||||||||    
T  764 tccaataca 756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 53 - 336
Target Start/End: Original strand, 39624 - 39907
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    ||||||||| || |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||| ||||||||||    
T  39624 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaataatccttcga 39723  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagacnnnnnnnaaatgacaaagaatcttgattg 252  Q
    | ||||||||||||||||||||||  |||       ||||||| || | |||||||||||||   ||||||       |||||||||||| |||||||||    
T  39724 agtttgaatgattttgaataccacatgacattttttaagtgatgaaaaatcttgattgaatagttcaagactttttaaaaatgacaaagagtcttgattg 39823  T
Q  253 aataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||| ||||| ||       || ||| ||| |||||||||||||||||||||||||||||||| || |||| ||||||||||||    
T  39824 aataccacaaaactttttttaagttgtaaaaagtcttgattgaataccacaagactttttcataattaaaaggtcttttaaaat 39907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 116 - 360
Target Start/End: Complemental strand, 4337 - 4093
Alignment:
Q  116 aatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatat 215  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||       || |||| || |||||||||||||||     
T  4337 aatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatac 4238  T
Q  216 cacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcat 315  Q
    | ||||||       |||| ||||||| ||||||||||||| ||||||||       || ||| ||| |||||||||||||||||||||||||||||||     
T  4237 ctcaagacttttttaaaattacaaagagtcttgattgaataccacaagactttttttaatttgcaaaaagtcttgattgaataccacaagactttttcaa 4138  T
Q  316 gataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
     || ||||||||||||||||| |  ||||||| | ||||||||||    
T  4137 aattaaaaagtcttttaaaatcctatagaatcctaatccaataca 4093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 231 - 361
Target Start/End: Complemental strand, 8784 - 8654
Alignment:
Q  231 aaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttt 330  Q
    ||||||||||||||||||||| |||||||||||||       |||||| ||| ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  8784 aaatgacaaagaatcttgattaaataacacaagactttttttaaattgaaaaaagtcttgattgaataccacaatactttttcatgataaaaaaatcttt 8685  T
Q  331 taaaattccttagaatcatgatccaatacac 361  Q
    |||||| ||||||||||||||||||||||||    
T  8684 taaaatcccttagaatcatgatccaatacac 8654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 53 - 223
Target Start/End: Original strand, 36914 - 37084
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    ||||||||| || |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  36914 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatgcttcga 37013  T
Q  153 aatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattgaatatcacaagac 223  Q
    ||||| |||||||||||||||| | ||||       || |||  |||||||||||||||||| ||||||||    
T  37014 aattttaatgattttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatagcacaagac 37084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 37057 - 37113
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||||||| |||||||||||||||| || |||||||||||||||||    
T  37057 aaagagtcttgattgaatagcacaagactttttcataattaaaaagtcttttaaaat 37113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 76; Significance: 6e-35; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 53 - 176
Target Start/End: Original strand, 58083 - 58206
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||||||||||| ||||||||||||| ||| || || |||||||  | || ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  58083 aagaaatctcatcttttcatgaaagattttctcttgttaaaattatactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 58182  T
Q  153 aatttgaatgattttgaataccac 176  Q
    ||||||||||||||||||||||||    
T  58183 aatttgaatgattttgaataccac 58206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 284 - 360
Target Start/End: Original strand, 58272 - 58348
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||| || | ||||| | ||||||||||    
T  58272 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatggaatcctaatccaataca 58348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 64; Significance: 8e-28; HSPs: 3)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 112 - 265
Target Start/End: Complemental strand, 14023 - 13870
Alignment:
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 211  Q
    ||||||||||||||||||  ||||||||||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  14023 acaaaatccatcaaaatccaatttattaaacaatcttttgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 13924  T
Q  212 atatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagac 265  Q
    ||| | ||| ||       |||||||||||| ||||||||||||| ||||||||    
T  13923 atacctcaatacttttttaaaatgacaaagagtcttgattgaataccacaagac 13870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 370
Target Start/End: Complemental strand, 13897 - 13807
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaa 370  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||  | ||||||| | |||||||||| ||| |||||    
T  13897 aaagagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaatacatcccccttaa 13807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 14072 - 14040
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttc 85  Q
    |||||||||||| ||||||||||||||||||||    
T  14072 aagaaatctcatcttttcatgaaagactttttc 14040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 64; Significance: 8e-28; HSPs: 4)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 112 - 265
Target Start/End: Original strand, 21304 - 21457
Alignment:
Q  112 acaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 211  Q
    ||||||||||||||||||  ||||||||||||||| || |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  21304 acaaaatccatcaaaatccaatttattaaacaatcttttgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 21403  T
Q  212 atatcacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagac 265  Q
    ||| | ||| ||       |||||||||||| ||||||||||||| ||||||||    
T  21404 atacctcaatacttttttaaaatgacaaagagtcttgattgaataccacaagac 21457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 370
Target Start/End: Original strand, 21430 - 21520
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaa 370  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||  | ||||||| | |||||||||| ||| |||||    
T  21430 aaagagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaatacatcccccttaa 21520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 21255 - 21287
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttc 85  Q
    |||||||||||| ||||||||||||||||||||    
T  21255 aagaaatctcatcttttcatgaaagactttttc 21287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 28542 - 28510
Alignment:
Q  53 aagaaatctcatgttttcatgaaagactttttc 85  Q
    |||||||||||| ||||||||||||||||||||    
T  28542 aagaaatctcatcttttcatgaaagactttttc 28510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 121
Target Start/End: Complemental strand, 14967 - 14892
Alignment:
Q  46 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatcca 121  Q
    ||||| ||||||||||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||    
T  14967 caatcttaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca 14892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 14864 - 14812
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  14864 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaat 14812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 152
Target Start/End: Original strand, 3712 - 3798
Alignment:
Q  66 ttttcatgaaagactttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 152  Q
    |||| ||||||||| ||||| || ||||||| || || ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  3712 tttttatgaaagaccttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 3798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 11793 - 11845
Alignment:
Q  284 agtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 336  Q
    ||||||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  11793 agtcttgattgaatatcacaagacttttttataataaaaaagtcttttaaaat 11845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 371
Target Start/End: Original strand, 81789 - 81874
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaat 371  Q
    ||||||||||||||||||||||||||  |  | |||||||||||||||||| | ||| ||||   |||||||||||||| ||||||    
T  81789 tcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttaaaatctcaatccaatacaccccccttaat 81874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 199998 - 199905
Alignment:
Q  80 tttttcatgctaaaatttcagtagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatac 173  Q
    ||||| || ||||| ||||| || |||||| ||||||||| ||||||||   |||||||||||| || ||| |||||||||||||||| |||||    
T  199998 ttttttatactaaagtttcactaaaaaatctcacaaaatcaatcaaaattcaatttattaaacactctttcaaaatttgaatgattttaaatac 199905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 199797 - 199730
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatc 347  Q
    |||||||||| |||| ||||||||||||||||| ||  ||||||| |||||| |||| ||||| ||||    
T  199797 aaagagtcttaattggataccacaagactttttaatactaaaaaactcttttgaaatcccttaaaatc 199730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 12030 - 12087
Alignment:
Q  303 aagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    ||||||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  12030 aagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 12087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 12056 - 11999
Alignment:
Q  303 aagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 360  Q
    |||||||||| || || ||||||||||||||||| || ||||||| | ||||||||||    
T  12056 aagactttttaattatgaaaaagtcttttaaaatcccatagaatcctaatccaataca 11999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000007; HSPs: 5)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 233759 - 233685
Alignment:
Q  231 aaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaag 305  Q
    |||||||||||| ||||||||||||| ||||||||       || ||| ||| ||||||||||||||||||||||    
T  233759 aaatgacaaagagtcttgattgaataccacaagactttttctaagttgcaaaaagtcttgattgaataccacaag 233685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 280 - 313
Target Start/End: Complemental strand, 233752 - 233719
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttc 313  Q
    ||||||||||||||||||||||||||||||||||    
T  233752 aaagagtcttgattgaataccacaagactttttc 233719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 234607 - 234533
Alignment:
Q  231 aaatgacaaagaatcttgattgaataacacaagacnnnnnnnaaattggaaagagtcttgattgaataccacaag 305  Q
    |||||||||||| ||||||||||||| ||||||||       || ||| ||| ||||||||||||||||||||||    
T  234607 aaatgacaaagagtcttgattgaataccacaagactttttctaagttgcaaaaagtcttgattgaataccacaag 234533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 280 - 313
Target Start/End: Complemental strand, 234600 - 234567
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttc 313  Q
    ||||||||||||||||||||||||||||||||||    
T  234600 aaagagtcttgattgaataccacaagactttttc 234567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 313
Target Start/End: Complemental strand, 222584 - 222551
Alignment:
Q  280 aaagagtcttgattgaataccacaagactttttc 313  Q
    ||||||| ||||||||||||||||||||||||||    
T  222584 aaagagttttgattgaataccacaagactttttc 222551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 1892 - 1970
Alignment:
Q  286 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 364  Q
    |||| |||||||||||| | | ||||| || || |||||||||||||||||  |||| |||| |||| |||||||||||    
T  1892 tcttaattgaataccaccaaatttttttattattaaaaagtcttttaaaatctcttaaaatcttgattcaatacacccc 1970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University