View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19726_low_55 (Length: 264)
Name: NF19726_low_55
Description: NF19726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19726_low_55 |
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Alignment Details
Target: chr1 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 16 - 248
Target Start/End: Complemental strand, 35035345 - 35035113
Alignment:
| Q |
16 |
atctagaggaataactgtatcaaataattttctagacaagtattaaaacaatagaaaaatataaaattaccgatacaataaaattgtaacttaaaacaac |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35035345 |
atctagaggaataactgtatcaaataattttctagacaagtattaaaacaatagaaaaatataaaattaccgatacaataaaattgtaacttaaaacaac |
35035246 |
T |
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| Q |
116 |
aatggcaccagacaaagtaccttaaatgaaatagtaaatatgtaaataaaagacaaaattatgtagcctaaatatcattcggtgtcaggaacatttgtag |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35035245 |
aatggcaccagacaaagtaccttaaatgaaatagtaaatatgtaaataaaagacaaaattatgtagcctaaatatcattcggtgtcaggaacatttgtag |
35035146 |
T |
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| Q |
216 |
cttcctgatcagctggtgaagtacccatgaaag |
248 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
35035145 |
cttcctgatcagctggtgaagtacccatgaaag |
35035113 |
T |
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