View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19726_low_65 (Length: 233)
Name: NF19726_low_65
Description: NF19726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19726_low_65 |
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Alignment Details
Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 48681142 - 48680929
Alignment:
| Q |
2 |
ttcaattacgtctcaccttagttttacacacagaaagtaacaagatcagaaaacatacttcgctgttatttcattctttagtagggtaattatacatgta |
101 |
Q |
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| T |
48681142 |
ttcaattacgtctcaccttagttttacacacaaaaagtaacaagatcagaaaatataattcgctgttatttcattctttagtagggtaattatacatgta |
48681043 |
T |
|
| Q |
102 |
attcactgtgaacttctttatatacaattgaatagtaattttcttgcctgtttgaatttaagtctgttaaatttggttatgtagcataagtcagatgttt |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48681042 |
attcactgtgaacttctttatatacaattgaatagtaattttcttgcctgtttgaatttaagtctgttaaatttggttatgtagcataagtcagatgttt |
48680943 |
T |
|
| Q |
202 |
tgatatagtttttt |
215 |
Q |
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|||||||||||||| |
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| T |
48680942 |
tgatatagtttttt |
48680929 |
T |
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