View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19727_low_37 (Length: 252)

Name: NF19727_low_37
Description: NF19727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19727_low_37
NF19727_low_37
[»] chr1 (55 HSPs)
chr1 (100-252)||(49102787-49102939)
chr1 (100-252)||(6538101-6538255)
chr1 (106-252)||(25561137-25561285)
chr1 (147-252)||(50097728-50097835)
chr1 (160-252)||(43530171-43530265)
chr1 (150-252)||(10618937-10619041)
chr1 (103-249)||(17556909-17557058)
chr1 (106-252)||(36886983-36887132)
chr1 (181-252)||(52073352-52073425)
chr1 (110-252)||(5883426-5883571)
chr1 (18-100)||(9253543-9253625)
chr1 (106-252)||(43036141-43036290)
chr1 (103-252)||(41432577-41432729)
chr1 (104-249)||(50084244-50084391)
chr1 (159-252)||(24436804-24436899)
chr1 (159-252)||(34738429-34738524)
chr1 (106-198)||(45752073-45752165)
chr1 (180-252)||(17416611-17416685)
chr1 (177-249)||(51303065-51303139)
chr1 (177-252)||(1278583-1278660)
chr1 (102-252)||(35619330-35619481)
chr1 (194-252)||(40136131-40136191)
chr1 (179-252)||(30543255-30543330)
chr1 (159-252)||(36325829-36325924)
chr1 (159-248)||(12625698-12625786)
chr1 (148-210)||(19258935-19258997)
chr1 (163-252)||(36385453-36385543)
chr1 (106-252)||(50587147-50587295)
chr1 (182-252)||(33579367-33579439)
chr1 (164-252)||(32123576-32123664)
chr1 (172-252)||(9861203-9861284)
chr1 (177-249)||(38958079-38958153)
chr1 (168-210)||(13044468-13044510)
chr1 (184-247)||(26345744-26345809)
chr1 (165-252)||(28848677-28848766)
chr1 (170-249)||(34551971-34552052)
chr1 (190-249)||(35604172-35604232)
chr1 (220-252)||(28217478-28217510)
chr1 (219-251)||(34141643-34141675)
chr1 (160-249)||(36269860-36269950)
chr1 (162-218)||(50598867-50598923)
chr1 (179-243)||(718466-718532)
chr1 (104-218)||(47742695-47742810)
chr1 (99-137)||(1278344-1278382)
chr1 (219-249)||(33643752-33643782)
chr1 (169-252)||(36269308-36269393)
chr1 (185-252)||(42161951-42162020)
chr1 (177-252)||(50476642-50476719)
chr1 (193-252)||(50915851-50915912)
chr1 (108-229)||(69868-69992)
chr1 (168-252)||(5970318-5970408)
chr1 (104-137)||(39125262-39125295)
chr1 (194-245)||(7915637-7915689)
chr1 (179-252)||(34749907-34749982)
chr1 (160-237)||(39125315-39125392)
[»] chr3 (49 HSPs)
chr3 (102-252)||(53888601-53888753)
chr3 (104-242)||(3333988-3334128)
chr3 (102-252)||(35283201-35283354)
chr3 (106-252)||(32720908-32721049)
chr3 (109-210)||(54089666-54089768)
chr3 (110-252)||(46891500-46891645)
chr3 (159-252)||(1132807-1132902)
chr3 (106-252)||(27681917-27682066)
chr3 (162-252)||(2927958-2928050)
chr3 (102-243)||(9773534-9773676)
chr3 (159-252)||(30697485-30697578)
chr3 (151-252)||(48444619-48444721)
chr3 (137-248)||(36637917-36638031)
chr3 (101-252)||(40674221-40674375)
chr3 (102-252)||(3537320-3537473)
chr3 (121-243)||(9768300-9768424)
chr3 (159-242)||(50201692-50201777)
chr3 (179-252)||(4247231-4247306)
chr3 (159-252)||(32858944-32859038)
chr3 (179-252)||(18257600-18257675)
chr3 (104-196)||(40118717-40118809)
chr3 (106-252)||(29623350-29623497)
chr3 (161-252)||(50345483-50345577)
chr3 (159-249)||(3457470-3457564)
chr3 (179-252)||(13638540-13638616)
chr3 (190-252)||(31651348-31651412)
chr3 (159-252)||(54748425-54748525)
chr3 (167-252)||(517512-517599)
chr3 (105-252)||(5939598-5939748)
chr3 (184-252)||(49304322-49304391)
chr3 (160-228)||(53620359-53620429)
chr3 (179-252)||(54089346-54089422)
chr3 (170-248)||(38401802-38401882)
chr3 (167-249)||(51686623-51686707)
chr3 (179-248)||(15499191-15499262)
chr3 (159-252)||(30996190-30996285)
chr3 (167-252)||(34729218-34729304)
chr3 (179-252)||(42134582-42134657)
chr3 (146-218)||(42261609-42261681)
chr3 (218-249)||(7965133-7965164)
chr3 (190-249)||(11500219-11500281)
chr3 (177-252)||(42157707-42157785)
chr3 (104-151)||(46017098-46017145)
chr3 (185-252)||(17642703-17642772)
chr3 (179-250)||(23568179-23568252)
chr3 (105-252)||(33281540-33281682)
chr3 (219-252)||(19148281-19148314)
chr3 (159-249)||(54126377-54126469)
chr3 (102-142)||(33944454-33944494)
[»] chr2 (46 HSPs)
chr2 (106-241)||(15803297-15803435)
chr2 (132-252)||(11522026-11522147)
chr2 (103-245)||(31584582-31584727)
chr2 (159-252)||(36030907-36031002)
chr2 (159-252)||(12941669-12941764)
chr2 (159-252)||(16625677-16625771)
chr2 (103-239)||(27987793-27987931)
chr2 (103-239)||(28074326-28074464)
chr2 (179-252)||(30523391-30523466)
chr2 (179-251)||(30265251-30265325)
chr2 (108-252)||(36870357-36870499)
chr2 (159-251)||(5322000-5322095)
chr2 (161-249)||(16465032-16465123)
chr2 (179-251)||(33206901-33206976)
chr2 (180-248)||(4666253-4666323)
chr2 (177-252)||(32761176-32761253)
chr2 (177-251)||(41503269-41503346)
chr2 (186-252)||(9087597-9087665)
chr2 (179-249)||(26618497-26618569)
chr2 (160-252)||(5002659-5002754)
chr2 (179-251)||(32950991-32951066)
chr2 (159-252)||(38325218-38325316)
chr2 (159-247)||(39819958-39820049)
chr2 (119-252)||(1270533-1270670)
chr2 (177-252)||(3254729-3254806)
chr2 (219-252)||(3022809-3022842)
chr2 (167-248)||(7367695-7367779)
chr2 (103-252)||(13018293-13018445)
chr2 (179-252)||(14385194-14385269)
chr2 (178-252)||(29880878-29880954)
chr2 (219-252)||(39913387-39913420)
chr2 (219-252)||(42946658-42946691)
chr2 (160-249)||(26599128-26599219)
chr2 (177-252)||(39670072-39670146)
chr2 (189-252)||(13767532-13767597)
chr2 (177-252)||(16518979-16519056)
chr2 (221-252)||(17514933-17514964)
chr2 (103-142)||(31083025-31083064)
chr2 (184-252)||(44656647-44656717)
chr2 (179-245)||(10820660-10820729)
chr2 (184-252)||(26427646-26427718)
chr2 (185-252)||(31550160-31550229)
chr2 (169-252)||(34757720-34757805)
chr2 (219-252)||(9087399-9087432)
chr2 (106-154)||(14008147-14008195)
chr2 (167-252)||(39205131-39205218)
[»] chr4 (55 HSPs)
chr4 (106-252)||(40422891-40423040)
chr4 (130-252)||(28880105-28880229)
chr4 (104-245)||(31418776-31418916)
chr4 (134-252)||(18397027-18397148)
chr4 (134-252)||(18399715-18399836)
chr4 (110-252)||(55813453-55813594)
chr4 (159-252)||(6836514-6836608)
chr4 (103-252)||(48620403-48620546)
chr4 (109-249)||(13984796-13984937)
chr4 (106-228)||(42650772-42650895)
chr4 (159-252)||(42759524-42759618)
chr4 (121-252)||(46176772-46176904)
chr4 (170-252)||(46669827-46669912)
chr4 (181-252)||(49936616-49936689)
chr4 (146-252)||(21443136-21443244)
chr4 (151-248)||(9119112-9119210)
chr4 (167-252)||(30307483-30307569)
chr4 (177-252)||(45022427-45022504)
chr4 (109-201)||(6121430-6121523)
chr4 (180-252)||(34713067-34713137)
chr4 (179-252)||(15451229-15451304)
chr4 (179-252)||(24662639-24662714)
chr4 (180-252)||(18318888-18318962)
chr4 (169-248)||(24802673-24802754)
chr4 (159-209)||(27143379-27143429)
chr4 (153-249)||(42954725-42954823)
chr4 (179-249)||(8828102-8828174)
chr4 (159-249)||(9021051-9021143)
chr4 (177-243)||(25843959-25844026)
chr4 (109-252)||(41495461-41495607)
chr4 (152-252)||(47063796-47063898)
chr4 (186-252)||(4441921-4441990)
chr4 (185-252)||(32648902-32648971)
chr4 (106-252)||(38136652-38136801)
chr4 (179-252)||(27485154-27485230)
chr4 (177-218)||(38644636-38644677)
chr4 (219-252)||(53013701-53013734)
chr4 (174-210)||(3075651-3075687)
chr4 (178-250)||(39089739-39089814)
chr4 (159-207)||(52430418-52430466)
chr4 (168-248)||(54205987-54206069)
chr4 (170-252)||(368171-368256)
chr4 (185-252)||(904311-904380)
chr4 (218-252)||(32579289-32579323)
chr4 (177-252)||(37662757-37662834)
chr4 (109-175)||(40424316-40424382)
chr4 (185-252)||(41844549-41844618)
chr4 (219-252)||(516169-516202)
chr4 (219-252)||(27143292-27143325)
chr4 (190-252)||(31428915-31428978)
chr4 (219-252)||(47047417-47047450)
chr4 (179-218)||(34236429-34236469)
chr4 (106-154)||(35959382-35959430)
chr4 (102-142)||(41363985-41364025)
chr4 (219-251)||(54240624-54240656)
[»] chr7 (45 HSPs)
chr7 (105-252)||(22556522-22556671)
chr7 (150-252)||(33187710-33187814)
chr7 (160-252)||(4787875-4787970)
chr7 (159-252)||(38138045-38138140)
chr7 (106-252)||(6746400-6746546)
chr7 (106-252)||(23465818-23465967)
chr7 (161-252)||(31055466-31055560)
chr7 (104-252)||(42112774-42112926)
chr7 (183-252)||(374432-374503)
chr7 (159-248)||(14676348-14676439)
chr7 (154-251)||(44487202-44487301)
chr7 (184-248)||(45510460-45510526)
chr7 (106-252)||(38505162-38505311)
chr7 (108-252)||(36907397-36907544)
chr7 (103-210)||(41471601-41471709)
chr7 (159-218)||(40985271-40985330)
chr7 (190-252)||(24923297-24923361)
chr7 (161-251)||(46611757-46611849)
chr7 (110-252)||(21687547-21687693)
chr7 (188-249)||(41714110-41714173)
chr7 (179-252)||(43230089-43230164)
chr7 (159-210)||(23552335-23552386)
chr7 (201-252)||(31770253-31770306)
chr7 (109-208)||(32228928-32229031)
chr7 (219-252)||(38987507-38987540)
chr7 (199-250)||(35489904-35489956)
chr7 (159-252)||(43348111-43348206)
chr7 (159-252)||(45066837-45066931)
chr7 (147-210)||(30081531-30081594)
chr7 (102-210)||(35682744-35682854)
chr7 (177-249)||(38991363-38991437)
chr7 (185-249)||(46509382-46509448)
chr7 (102-248)||(48775922-48776063)
chr7 (150-196)||(1278094-1278140)
chr7 (177-252)||(17818400-17818477)
chr7 (185-252)||(28437440-28437509)
chr7 (170-249)||(30081089-30081170)
chr7 (185-252)||(33810110-33810179)
chr7 (218-252)||(42593060-42593094)
chr7 (162-252)||(425634-425728)
chr7 (161-210)||(38679864-38679913)
chr7 (135-198)||(23128123-23128187)
chr7 (179-252)||(32650283-32650358)
chr7 (179-252)||(36845333-36845408)
chr7 (179-252)||(42266899-42266974)
[»] chr8 (43 HSPs)
chr8 (103-252)||(1839635-1839787)
chr8 (114-251)||(9054337-9054477)
chr8 (102-252)||(10878599-10878749)
chr8 (159-252)||(32158879-32158974)
chr8 (110-252)||(8948739-8948882)
chr8 (178-252)||(13258600-13258676)
chr8 (167-252)||(27085462-27085550)
chr8 (159-248)||(35376511-35376601)
chr8 (106-252)||(29584288-29584437)
chr8 (179-249)||(3394078-3394150)
chr8 (179-249)||(37388396-37388468)
chr8 (177-252)||(39194045-39194123)
chr8 (159-249)||(42589730-42589823)
chr8 (179-252)||(40984968-40985041)
chr8 (106-248)||(10589922-10590062)
chr8 (191-252)||(13537456-13537519)
chr8 (191-252)||(13627004-13627067)
chr8 (103-252)||(31150016-31150167)
chr8 (153-228)||(28416043-28416118)
chr8 (177-252)||(16424252-16424329)
chr8 (107-208)||(23963167-23963272)
chr8 (177-250)||(5158927-5159002)
chr8 (150-210)||(31305639-31305699)
chr8 (179-252)||(35616674-35616749)
chr8 (179-252)||(35856422-35856497)
chr8 (180-252)||(11742635-11742709)
chr8 (177-245)||(39418172-39418242)
chr8 (159-252)||(32267-32365)
chr8 (179-248)||(5941181-5941253)
chr8 (108-188)||(13406754-13406835)
chr8 (104-218)||(11226218-11226333)
chr8 (169-252)||(13369799-13369887)
chr8 (190-252)||(32502947-32503010)
chr8 (194-249)||(6038098-6038155)
chr8 (159-252)||(26042347-26042438)
chr8 (103-152)||(1840027-1840076)
chr8 (219-252)||(7079928-7079961)
chr8 (219-252)||(35353941-35353974)
chr8 (159-249)||(38404458-38404550)
chr8 (158-252)||(41540372-41540467)
chr8 (159-218)||(4266656-4266713)
chr8 (116-200)||(5935330-5935414)
chr8 (179-244)||(15108156-15108223)
[»] chr5 (47 HSPs)
chr5 (106-252)||(1934925-1935074)
chr5 (105-252)||(3936397-3936547)
chr5 (102-240)||(15917518-15917659)
chr5 (106-252)||(4841526-4841676)
chr5 (102-252)||(9684605-9684758)
chr5 (109-252)||(39011945-39012088)
chr5 (179-252)||(31632948-31633023)
chr5 (105-252)||(3081150-3081299)
chr5 (159-252)||(9096425-9096519)
chr5 (179-252)||(19389720-19389795)
chr5 (159-251)||(35704727-35704821)
chr5 (177-252)||(3924746-3924823)
chr5 (101-249)||(19337041-19337189)
chr5 (159-252)||(32824762-32824858)
chr5 (159-252)||(12063854-12063953)
chr5 (179-248)||(17668026-17668097)
chr5 (179-252)||(28523732-28523807)
chr5 (192-252)||(1175851-1175913)
chr5 (105-210)||(21916121-21916228)
chr5 (186-249)||(27350905-27350970)
chr5 (166-252)||(35704925-35705013)
chr5 (170-252)||(37909105-37909188)
chr5 (179-252)||(35042318-35042393)
chr5 (168-252)||(15399929-15400015)
chr5 (177-252)||(22114819-22114897)
chr5 (170-252)||(8944159-8944244)
chr5 (169-249)||(6373255-6373338)
chr5 (179-252)||(344148-344225)
chr5 (191-247)||(5696486-5696544)
chr5 (103-169)||(35708610-35708677)
chr5 (177-252)||(1176394-1176471)
chr5 (218-248)||(14157136-14157166)
chr5 (185-252)||(26149717-26149786)
chr5 (219-249)||(28154807-28154837)
chr5 (219-249)||(29709627-29709657)
chr5 (185-252)||(35868944-35869013)
chr5 (219-252)||(5088804-5088837)
chr5 (108-149)||(6373368-6373409)
chr5 (219-252)||(6491298-6491331)
chr5 (219-252)||(7147509-7147542)
chr5 (114-175)||(7782583-7782644)
chr5 (219-252)||(26018855-26018888)
chr5 (219-252)||(29799751-29799784)
chr5 (191-248)||(31535219-31535276)
chr5 (177-252)||(4342964-4343040)
chr5 (183-248)||(15060093-15060160)
chr5 (179-248)||(33682490-33682561)
[»] chr6 (26 HSPs)
chr6 (106-252)||(33677137-33677285)
chr6 (109-252)||(33184280-33184426)
chr6 (110-252)||(8439219-8439362)
chr6 (159-249)||(597007-597099)
chr6 (107-245)||(25073078-25073220)
chr6 (158-252)||(2523506-2523600)
chr6 (159-209)||(2502196-2502246)
chr6 (179-252)||(16329493-16329568)
chr6 (179-252)||(26683431-26683505)
chr6 (179-252)||(33939016-33939090)
chr6 (179-252)||(20381762-20381833)
chr6 (219-252)||(4465040-4465073)
chr6 (179-252)||(13120313-13120389)
chr6 (191-249)||(32222119-32222179)
chr6 (179-249)||(32549696-32549768)
chr6 (160-249)||(6695413-6695504)
chr6 (192-252)||(22817246-22817308)
chr6 (106-202)||(4465077-4465175)
chr6 (177-252)||(33590219-33590296)
chr6 (219-252)||(2502300-2502333)
chr6 (219-252)||(6855765-6855798)
chr6 (114-175)||(8559185-8559246)
chr6 (198-252)||(26289665-26289721)
chr6 (103-140)||(28551722-28551759)
chr6 (106-154)||(5825547-5825595)
chr6 (167-252)||(9104826-9104912)
[»] scaffold0632 (1 HSPs)
scaffold0632 (106-252)||(1894-2044)
[»] scaffold1763 (1 HSPs)
scaffold1763 (179-252)||(496-571)
[»] scaffold0245 (2 HSPs)
scaffold0245 (177-252)||(4260-4337)
scaffold0245 (99-137)||(4021-4059)
[»] scaffold0229 (2 HSPs)
scaffold0229 (177-252)||(4591-4668)
scaffold0229 (99-137)||(4352-4390)
[»] scaffold0006 (1 HSPs)
scaffold0006 (102-252)||(59668-59828)
[»] scaffold0373 (1 HSPs)
scaffold0373 (159-204)||(8979-9024)
[»] scaffold0119 (2 HSPs)
scaffold0119 (167-252)||(30567-30655)
scaffold0119 (167-252)||(37235-37323)
[»] scaffold0717 (1 HSPs)
scaffold0717 (185-252)||(1692-1761)
[»] scaffold0350 (1 HSPs)
scaffold0350 (194-249)||(1428-1485)
[»] scaffold0927 (1 HSPs)
scaffold0927 (177-252)||(2798-2877)
[»] scaffold0024 (1 HSPs)
scaffold0024 (179-252)||(44869-44944)


Alignment Details
Target: chr1 (Bit Score: 86; Significance: 3e-41; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 100 - 252
Target Start/End: Original strand, 49102787 - 49102939
Alignment:
Q  100 cgacttaggctttgtttgggagtttggaaggaaggggaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttga 198  Q
    ||||| |||||||||||||||||||||| || ||||||||||| | ||||||||| | | |||||||||| |||||| ||||||||||||||||||||||    
T  49102787 cgactaaggctttgtttgggagtttggaggggaggggaaggaagggctttggggggagagaaatatagggaaaaattgagaaatctttcacattttttga 49102886  T
Q  199 aagagtatttttgtagagaaataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||| |||||  |||||||||| |||||||| ||||||||||||||    
T  49102887 aagagtatttttttagagtgataaattaat-tttatgatgaatatatttttaat 49102939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 100 - 252
Target Start/End: Complemental strand, 6538255 - 6538101
Alignment:
Q  100 cgacttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaa 199  Q
    ||||||||| ||||||||| |||||| | || | ||||||||| |||||||  ||| ||||||| ||||||||||| |||||||||||| ||||||||||    
T  6538255 cgacttaggttttgtttggaagtttgaaggggaagggaaggaaagactttgaaggagataaatacaggggaaaattgagaaatctttcatattttttgaa 6538156  T
Q  200 agagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||| ||||||   |||||| ||||||||| |||||||||||||||||    
T  6538155 agagtatttttttagagagtgataaatcaatgtttataattaatatatttttaat 6538101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 252
Target Start/End: Original strand, 25561137 - 25561285
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagta 205  Q
    |||||||||||| ||||||| |  ||| ||||| ||| | |||||||||| | |||||||| |||||||| |||||||||||||||||||||||||||||    
T  25561137 aggctttgtttgcgagtttgtagcgaaagggaatgaaaggctttgggggagagaaatatagaggaaaattgagaaatctttcacattttttgaaagagta 25561236  T
Q  206 tttttgta--gagaaataaattaatgtttatgattaatatatttttaat 252  Q
    ||||| ||  |||  |||| |||||| ||||||||||||||||||||||    
T  25561237 tttttttagcgagtgataagttaatgcttatgattaatatatttttaat 25561285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 50097835 - 50097728
Alignment:
Q  147 tttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatata 244  Q
    ||||||| ||| ||||||| || |||||| |||||||||||||||||||||||||||||||||| ||||||   |||||||| |||||||||||||||||    
T  50097835 tttggggaacaaaaatataaggaaaaattgagaaatctttcacattttttgaaagagtatttttttagagagtgataaattattgtttatgattaatata 50097736  T
Q  245 tttttaat 252  Q
    ||||||||    
T  50097735 tttttaat 50097728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 252
Target Start/End: Original strand, 43530171 - 43530265
Alignment:
Q  160 aatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| ||||| ||||||   ||||||||||| ||||||||||||||||||||||    
T  43530171 aatataggggaaaattgagaaatctttcacattttttaaaagagtgtttttttagagagtgataaattaatgcttatgattaatatatttttaat 43530265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 10619041 - 10618937
Alignment:
Q  150 gggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatattt 247  Q
    |||||||||||||||| ||||||||| |||||||||||||||||| |||||| || ||||| ||||||   |||||| |||| |||||||||||||||||    
T  10619041 gggggacataaatatatgggaaaattgagaaatctttcacattttctgaaagggtctttttttagagagtgataaatgaatgcttatgattaatatattt 10618942  T
Q  248 ttaat 252  Q
    |||||    
T  10618941 ttaat 10618937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 249
Target Start/End: Complemental strand, 17557058 - 17556909
Alignment:
Q  103 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttggg-ggacataaatataggggaaaattcagaaatctttcacattttttgaaag 201  Q
    ||||| |||| |||||||||||||| || ||||||||||| | ||||| | ||| | |||||||||| |||||  |||||||||||||||||||| ||||    
T  17557058 cttagactttctttgggagtttggaggggaggggaaggaaaggctttgcgaggatagaaatatagggaaaaatagagaaatctttcacatttttttaaag 17556959  T
Q  202 agtatttttgtagaga--aataaattaatgtttatgattaatatattttt 249  Q
    ||| ||||  ||||||   |||||||||||   |||||||||||||||||    
T  17556958 agtgttttcttagagagtgataaattaatgcggatgattaatatattttt 17556909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 252
Target Start/End: Complemental strand, 36887132 - 36886983
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 204  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||| ||||    |||||   ||||||||  |||||||||||| ||||||| |||| ||    
T  36887132 aggctttgtttgcgagtttggagggaaggggaaggaaagactttgaggggtggaaaatacgagggaaaatgaagaaatctttcaaattttttaaaagtgt 36887033  T
Q  205 atttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    | |||| |||||||  |||||||||||  |||||||| ||||||||||||    
T  36887032 agttttttagagaatgataaattaatgcatatgattactatatttttaat 36886983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 52073352 - 52073425
Alignment:
Q  181 atctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||||||||| |||| |||||||  ||||||||| ||||||||||||||||||||||||    
T  52073352 atctttcacattttttgaaagagtaattttttagagaatgataaattaacgtttatgattaatatatttttaat 52073425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 252
Target Start/End: Original strand, 5883426 - 5883571
Alignment:
Q  110 tttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtattt 208  Q
    |||||||| ||||||||| ||||||| || |||||  |||| ||||  | |||||||||  |||||| |||||| ||||| ||||||||||||||| |||    
T  5883426 tttgtttgagagtttggagggaagggaaaagaatggttttgaggggtgaaaaatataggaaaaaattgagaaatttttcatattttttgaaagagtcttt 5883525  T
Q  209 ttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    |  ||||||   ||||||||||  ||||||||||||||||||||||    
T  5883526 tgttagagagtgataaattaatacttatgattaatatatttttaat 5883571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 9253625 - 9253543
Alignment:
Q  18 gattttcaccacccaaaagaattataggtaaaggaggaagtgagttcggtagtggtgtgcgagagaacagctatgattagagc 100  Q
    |||| |||| |||||| |||||||||||||| ||||||||| |||||||||||||| ||||||||||| |||| ||| |||||    
T  9253625 gattgtcacaacccaatagaattataggtaacggaggaagtaagttcggtagtggtttgcgagagaacggctacgatcagagc 9253543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 252
Target Start/End: Original strand, 43036141 - 43036290
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 204  Q
    |||||||||||||||||||||| || ||||||||||| | ||||| ||||  | ||||| | ||||||||| | |||||||| ||||||| |  ||||||    
T  43036141 aggctttgtttgggagtttggaggggaggggaaggaagggctttgtggggtgagaaatagaagggaaaattgaaaaatcttttacattttcttgaagagt 43036240  T
Q  205 atttttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||  |||||   |||||||||   ||||||||||||||||||||||    
T  43036241 attttttcagagagtgataaattaagacttatgattaatatatttttaat 43036290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 252
Target Start/End: Original strand, 41432577 - 41432729
Alignment:
Q  103 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaag 201  Q
    ||||||||||||||||||||||||| || | ||||| ||| | |||||| |||    ||||| |||||||| |    ||||||||||| ||||||| |||    
T  41432577 cttaggctttgtttgggagtttggaggggaagggaaagaaaggctttggagggttggaaatacaggggaaattggtaaaatctttcacgttttttgcaag 41432676  T
Q  202 agtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||| |||| |||||||  ||||||||||  ||||||||||||||||||||||    
T  41432677 agtaattttttagagaataataaattaatacttatgattaatatatttttaat 41432729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 249
Target Start/End: Complemental strand, 50084391 - 50084244
Alignment:
Q  104 ttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggac-ataaatataggggaaaattcagaaatctttcacattttttgaaaga 202  Q
    |||||||||||| | ||||||||| ||||| ||||| || || |||| ||||  | |||||||||  |||||| |||||| |||||||||||||||||||    
T  50084391 ttaggctttgttcgagagtttggagggaagaggaagaaa-gattttgtgggaagagaaatataggaaaaaattgagaaatttttcacattttttgaaaga 50084293  T
Q  203 gtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    || ||||  || |||   ||||||||||||||||||||| |||||||||    
T  50084292 gtgttttcttaaagagtgataaattaatgtttatgattattatattttt 50084244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 24436804 - 24436899
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||| ||||||||||| |||||| |||||  ||||||| ||||| |||||| ||||||   |||||||||||||| |||||||||||||||||||    
T  24436804 aaatacaggggaaaattgagaaatttttcatgttttttggaagagaatttttttagagagtgataaattaatgtttttgattaatatatttttaat 24436899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 34738524 - 34738429
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||  |||| ||||||| |||||| |||| ||||||||  |||||||  ||||||||||  ||||||||||||||||||||||    
T  34738524 aaatataggggaaaatcaagaattctttcaaatttttagaaaaagtattttgttagagaattataaattaatagttatgattaatatatttttaat 34738429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 198
Target Start/End: Original strand, 45752073 - 45752165
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttga 198  Q
    |||||||||||| ||||||||| || ||| ||||||| |  || |||||||| ||||||||  ||||||| ||||||||||||||||||||||    
T  45752073 aggctttgtttgagagtttggaggggaggagaaggaagggtttcgggggacaaaaatatagaagaaaattgagaaatctttcacattttttga 45752165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 17416611 - 17416685
Alignment:
Q  180 aatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||| |||||| ||||||| |||| ||||||   ||||||||||||||||||||||||||||||||||    
T  17416611 aatctttcacagtttttgtaagagtaattttttagagattgataaattaatgtttatgattaatatatttttaat 17416685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 51303065 - 51303139
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    |||||||||||||||||||| ||||||| | ||| |||||||  ||||||||||| |||||||||||||||||||    
T  51303065 agaaatctttcacattttttcaaagagtgtatttttagagaatgataaattaatgcttatgattaatatattttt 51303139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 1278660 - 1278583
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||| ||||||||||| |||||||| |||| | |||||  ||||||||||| ||||||||||||||||||||||    
T  1278660 agaaatctatcacattttttaaaagagtaattttttggagaatgataaattaatgcttatgattaatatatttttaat 1278583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 252
Target Start/End: Original strand, 35619330 - 35619481
Alignment:
Q  102 acttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaag 201  Q
    ||||||| ||||||||| |||||||| ||  | |||| | | || ||||| ||| | ||||||||| ||||||| | |||||||||| ||||||| |||     
T  35619330 acttaggttttgtttggaagtttggagggg-gaggaatgtaagattttggaggagagaaatataggagaaaattgaaaaatctttcatatttttttaaat 35619428  T
Q  202 agtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||   |||||   |||||||||||||||||||||||||| |||||||    
T  35619429 agtattttatgagagagtgataaattaatgtttatgattaatatacttttaat 35619481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 40136131 - 40136191
Alignment:
Q  194 tttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||| |||||||||||||||||||  |||||||||||||||||||||||| |||||||||    
T  40136131 tttgagagagtatttttgtagagaatgataaattaatgtttatgattaatagatttttaat 40136191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 30543255 - 30543330
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||| ||||||||||||||| || |||| |||||||  ||||||||||  ||||||||||||||||||||||    
T  30543255 aaatcttttacattttttgaaagaataattttttagagaatgataaattaatacttatgattaatatatttttaat 30543330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 36325924 - 36325829
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    ||||| || |||||||  |||||||||||| ||||||||||||||| ||||| ||||||  ||| ||| | ||||||||||||||||| |||||||    
T  36325924 aaatacagaggaaaatggagaaatctttcagattttttgaaagagtgtttttctagagaacaatgaataattgtttatgattaatataattttaat 36325829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 12625698 - 12625786
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcaca-ttttttgaaagagtatttttgtagagaaataaattaatgtttatgattaatatatttt 248  Q
    ||||||| ||||||||| ||||||| |||||| |||||| ||||| ||||||| |||||  ||||||  ||||||||||||||||||||||    
T  12625698 aaatatatgggaaaattaagaaatccttcacatttttttaaaagaatatttttttagagtgataaat--atgtttatgattaatatatttt 12625786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 19258935 - 19258997
Alignment:
Q  148 ttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtattttt 210  Q
    |||||||| | ||||||||| | ||||| |||||||||||||||||||||||||| |||||||    
T  19258935 ttgggggagagaaatataggaggaaattgagaaatctttcacattttttgaaagaatattttt 19258997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 36385543 - 36385453
Alignment:
Q  163 ataggggaaaattcagaaatctttcacattttttgaaagagtatt-tttgtagagaaataaattaatgtttatgattaatatatttttaat 252  Q
    |||||| |||||| |||||||||||||||||||||||| ||| || |||  ||||  ||||||||||  |||||||||||| |||||||||    
T  36385543 atagggaaaaattgagaaatctttcacattttttgaaatagttttatttaaagagtgataaattaatacttatgattaatacatttttaat 36385453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 252
Target Start/End: Complemental strand, 50587295 - 50587147
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 204  Q
    ||||||||||||||||||||||||| |||||||||   | |||||  |||    ||||| ||||||||||  ||||||||| |||||||||| |||||||    
T  50587295 aggctttgtttgggagtttggaagggaggggaagggggg-ctttgaagggtgggaaatagaggggaaaatggagaaatcttacacattttttaaaagagt 50587197  T
Q  205 atttttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    |||||  ||||||   |||||||||||  ||||||||||| | |||||||    
T  50587196 attttgttagagattgataaattaatggctatgattaatacacttttaat 50587147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 252
Target Start/End: Complemental strand, 33579439 - 33579367
Alignment:
Q  182 tctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||| ||| |||||||||||||| |||| |||||||  ||||||||||| |||||| |||||||||||||||    
T  33579439 tcttttacaatttttgaaagagtaattttttagagaatgataaattaatgcttatgactaatatatttttaat 33579367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 32123664 - 32123576
Alignment:
Q  164 taggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||  ||||||||||||| |||||||||  ||| |||||||| ||||  |||||| ||||||||| ||||||||||| |||||    
T  32123664 taggggaaaatagagaaatctttcacgttttttgaa--agtgtttttgtaaagaatgataaatgaatgtttatcattaatatattgttaat 32123576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 252
Target Start/End: Original strand, 9861203 - 9861284
Alignment:
Q  172 aattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    |||| |||||||||||||| ||||||||| ||||||||| ||||||   |||||||||  ||||||||| |||||||||||||    
T  9861203 aattgagaaatctttcacagtttttgaaaaagtatttttctagagagtgataaattaagatttatgatt-atatatttttaat 9861284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 38958079 - 38958153
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    |||| ||||||||||||||||||||||||||||| |  | ||  |||||||| || |||||||||||||||||||    
T  38958079 agaagtctttcacattttttgaaagagtattttttttaaaaatgataaattactgcttatgattaatatattttt 38958153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 13044468 - 13044510
Alignment:
Q  168 ggaaaattcagaaatctttcacattttttgaaagagtattttt 210  Q
    |||||||| |||||||||||||||||||| |||||||||||||    
T  13044468 ggaaaattaagaaatctttcacattttttaaaagagtattttt 13044510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 26345809 - 26345744
Alignment:
Q  184 tttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattt 247  Q
    |||||||||||| ||| ||||| |||| |||||||  ||||||||||| |||||||||||||||||    
T  26345809 tttcacatttttcgaatgagtaattttttagagaatgataaattaatgcttatgattaatatattt 26345744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 28848677 - 28848766
Alignment:
Q  165 aggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||   |||||||||||| ||||| |||||||  |||| |||||||  |||||||||||  |||||||| ||||||||||||    
T  28848677 aggggaaaattgtaaaatctttcacaattttttaaagagtcattttttagagaatgataaattaatgcctatgattactatatttttaat 28848766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 249
Target Start/End: Original strand, 34551971 - 34552052
Alignment:
Q  170 aaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatattttt 249  Q
    |||||| | |||||||||| |||||||||||  |||||||| ||||||   |||||| |||| |||||||||||||||||||    
T  34551971 aaaattgacaaatctttcatattttttgaaaaggtatttttctagagagtgataaatcaatgcttatgattaatatattttt 34552052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 35604172 - 35604232
Alignment:
Q  190 attttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    ||||||||| ||||||||||| |||||||  ||||||||| |||||||||||||||||||||    
T  35604172 attttttgatagagtattttt-tagagaataataaattaacgtttatgattaatatattttt 35604232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 28217478 - 28217510
Alignment:
Q  220 taaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||||||||||||||||||||    
T  28217478 taaattaatgtttatgattaatatatttttaat 28217510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 34141675 - 34141643
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaa 251  Q
    |||||||||||||||||||||||||||||||||    
T  34141675 ataaattaatgtttatgattaatatatttttaa 34141643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 36269950 - 36269860
Alignment:
Q  160 aatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    |||||||||||||||  ||| | | |||||||||| | ||||||||||||| |||||||  ||||||||||| |||||||| |||| |||||    
T  36269950 aatataggggaaaatggagagacccttcacattttctaaaagagtattttt-tagagaatgataaattaatgcttatgattgatatgttttt 36269860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 50598867 - 50598923
Alignment:
Q  162 tataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa 218  Q
    ||||||| |||||  ||||||||||||| ||||||| |||||||||||| |||||||    
T  50598867 tatagggaaaaatagagaaatctttcactttttttggaagagtatttttttagagaa 50598923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 718466 - 718532
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatat 243  Q
    ||||||||||||||||| ||||||||  |||| || ||||  ||||||||||| |||||||||||||    
T  718466 aaatctttcacatttttcgaaagagtgattttttaaagaatgataaattaatgcttatgattaatat 718532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 218
Target Start/End: Complemental strand, 47742810 - 47742695
Alignment:
Q  104 ttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcaca-ttttttgaaaga 202  Q
    |||||||||||||||||||||||| ||  |||||||  | ||||| |||||  | |||||||| |||||||  |||||  ||||| | ||||||||| ||    
T  47742810 ttaggctttgtttgggagtttggaggggtggggaagcgaggacttcgggggtaagaaatatagaggaaaatgaagaaaattttcatatttttttgaagga 47742711  T
Q  203 gtatttttgtagagaa 218  Q
    |||||| | |||||||    
T  47742710 gtatttgtttagagaa 47742695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 1278344 - 1278382
Alignment:
Q  99 gcgacttaggctttgtttgggagtttggaaggaagggga 137  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  1278344 gcgacttaggctttgtttgggagtttggaggggagggga 1278382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 249
Target Start/End: Complemental strand, 33643782 - 33643752
Alignment:
Q  219 ataaattaatgtttatgattaatatattttt 249  Q
    |||||||||||||||||||||||||||||||    
T  33643782 ataaattaatgtttatgattaatatattttt 33643752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 252
Target Start/End: Original strand, 36269308 - 36269393
Alignment:
Q  169 gaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||| ||||| ||||||| |||| ||| ||||   ||||||||||||  | |||| |||| ||||||||||||||||||||||    
T  36269308 gaaaattgagaaacctttcaccttttctgagagagggattttgtagagaatgaaaaatgaatgcttatgattaatatatttttaat 36269393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 42161951 - 42162020
Alignment:
Q  185 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||  | |||| |||||||  ||||| |||| ||||||||||||||| |||||||    
T  42161951 ttcacattttttgaaagaacagttttttagagaatgataaactaatatttatgattaatatacttttaat 42162020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 50476719 - 50476642
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||||||||||| | ||||  ||| ||  ||||| ||||| |||| ||| |||||||||||||    
T  50476719 agaaatctttcacattttttgaaagagcaatttttaagataatgataaactaatgcttattattgatatatttttaat 50476642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 50915851 - 50915912
Alignment:
Q  193 ttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||| || ||||||||||  ||||||| |||| ||||||||| |||||||||||    
T  50915851 ttttgaaagagtgttattgtagagaatgataaattcatgtgtatgattaaaatatttttaat 50915912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 229
Target Start/End: Complemental strand, 69992 - 69868
Alignment:
Q  108 gctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtat 206  Q
    |||||||||| || |||||| || || |||||||| || |||| ||||  | ||||||  ||||||||  ||||||||||||  |||||| ||||||||     
T  69992 gctttgtttgtgaatttggaggggagaggaaggaaagattttgaggggtgaaaaatatgagggaaaatgaagaaatctttcaatttttttaaaagagtag 69893  T
Q  207 ttttgtagagaa--ataaattaatg 229  Q
    |||| |||||||  |||||||||||    
T  69892 ttttttagagaatgataaattaatg 69868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 5970318 - 5970408
Alignment:
Q  168 ggaaaattcagaaatctttcacatttttt--gaaagagtatttttgt--agagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||  ||||||||||||||||||||  |||||||| ||||| |  ||||||  ||||| |||||||||||||| |||| ||||||||    
T  5970318 ggaaaatagagaaatctttcacattttttttgaaagagtgtttttttttagagaatgataaactaatgtttatgattgatatgtttttaat 5970408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 137
Target Start/End: Original strand, 39125262 - 39125295
Alignment:
Q  104 ttaggctttgtttgggagtttggaaggaagggga 137  Q
    |||||||||||||||||||||||| |||||||||    
T  39125262 ttaggctttgtttgggagtttggagggaagggga 39125295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 7915689 - 7915637
Alignment:
Q  194 tttgaaagagtatttttgt-agagaaataaattaatgtttatgattaatatat 245  Q
    ||||||||||||||||| | ||||  ||||||||||| |||||||||||||||    
T  7915689 tttgaaagagtattttttttagagtgataaattaatgcttatgattaatatat 7915637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 34749907 - 34749982
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||||||||||  |||| |||||||  |||||||||   || ||||| || ||||||||||    
T  34749907 aaatctttcacattttttgaaagagtgattttttagagaatgataaattaaaacttttgattgatttatttttaat 34749982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 237
Target Start/End: Original strand, 39125315 - 39125392
Alignment:
Q  160 aatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgat 237  Q
    ||||||||| ||||||  ||||||| ||| ||||||| ||||||||||||| |||||||   ||||||||||||||||||    
T  39125315 aatatagggaaaaattg-gaaatctatcaaatttttttaaagagtattttt-tagagaatgttaaattaatgtttatgat 39125392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 102 - 252
Target Start/End: Complemental strand, 53888753 - 53888601
Alignment:
Q  102 acttaggctttgtttgggagtttggaaggaaggggaaggaatgactttggg-ggacataaatataggggaaaattcagaaatctttcacattttttgaaa 200  Q
    |||||||||||||||||||||||||| || ||||||||||| | ||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  53888753 acttaggctttgtttgggagtttggaggggaggggaaggaaaggctttgggtggacaaaaatataggggaaaattgagaaatctttcacattttttgaaa 53888654  T
Q  201 gagt-atttttgtagagaaataaattaatgtttatgattaatatatttttaat 252  Q
    | ||  ||||| |||||  |||| |||||| ||||| ||||||||||||||||    
T  53888653 gtgtgttttttttagagggataagttaatgcttatggttaatatatttttaat 53888601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 104 - 242
Target Start/End: Complemental strand, 3334128 - 3333988
Alignment:
Q  104 ttaggctttgtttgggagtttggaaggaaggggaaggaatgactttg--ggggacataaatataggggaaaattcagaaatctttcacattttttgaaag 201  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||  ||||| | |||||||| |||||||| ||||||||||||||||||||| |||    
T  3334128 ttaggttttgtttgggagtttggaagga-ggggaatgaatgactttgaaggggaaa-aaatatagaggaaaattgagaaatctttcacattttttggaag 3334031  T
Q  202 agtatttttgtagagaa--ataaattaatgtttatgattaata 242  Q
    ||||||||| |||||||  ||||||||||||||||||||||||    
T  3334030 agtatttttttagagaatgataaattaatgtttatgattaata 3333988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 252
Target Start/End: Complemental strand, 35283354 - 35283201
Alignment:
Q  102 acttaggctttgtttgggagtttggaaggaaggggaaggaatg-actttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaa 200  Q
    |||||||||||||||||||||||||| || ||||||||||| | | ||||||||| | || |||||| ||||||| ||||||||||||||||||||||||    
T  35283354 acttaggctttgtttgggagtttggaggggaggggaaggaaaggattttgggggagagaagtataggagaaaattgagaaatctttcacattttttgaaa 35283255  T
Q  201 gagtat--ttttgtagagaaataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||  |||| |||||  ||||||||||  |||||| |||||||||||||||    
T  35283254 gagtatttttttttagagtgataaattaattcttatgactaatatatttttaat 35283201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 106 - 252
Target Start/End: Original strand, 32720908 - 32721049
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagta 205  Q
    |||||||||||| ||||||||| || |||||||||       |||||||| | |||||||| ||||||||  |||||||||||||||| |||||||||||    
T  32720908 aggctttgtttgagagtttggaggggaggggaagg-------ttgggggatagaaatatagaggaaaattgtgaaatctttcacatttattgaaagagta 32721000  T
Q  206 tttttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||   ||||||||||| ||||||||||||||||||||||    
T  32721001 tttttgtagagagtgataaattaatgcttatgattaatatatttttaat 32721049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 109 - 210
Target Start/End: Original strand, 54089666 - 54089768
Alignment:
Q  109 ctttgtttgggagtttggaaggaaggggaaggaatgactttgggg-gacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatt 207  Q
    ||||||||||||||||||||||||||||||||||   |||||||| || | ||||||| | ||||||| |||||||||||||||||||||||| ||||||    
T  54089666 ctttgtttgggagtttggaaggaaggggaaggaagcgctttggggtgagagaaatatacgagaaaattgagaaatctttcacattttttgaaatagtatt 54089765  T
Q  208 ttt 210  Q
    |||    
T  54089766 ttt 54089768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 252
Target Start/End: Complemental strand, 46891645 - 46891500
Alignment:
Q  110 tttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtattt 208  Q
    ||||||||| |||||| | || |||||||||||  || | | ||||| | ||||| ||||||||||| |||||||||||| ||||||||||||| |||||    
T  46891645 tttgtttggaagtttgaaggggaggggaaggaaaaacatcgaggggagagaaatacaggggaaaattgagaaatctttcatattttttgaaagattattt 46891546  T
Q  209 ttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    || ||||||   ||||||||||  ||||||||||||||||||||||    
T  46891545 ttttagagactgataaattaatacttatgattaatatatttttaat 46891500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 1132807 - 1132902
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||| ||||||||   ||||||||||||||||||||||||||| |||| |||||||  ||||||||||||| ||| ||||||||||||||||    
T  1132807 aaatatagtggaaaattataaaatctttcacattttttgaaagagtaattttttagagaatgataaattaatgttcatggttaatatatttttaat 1132902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 106 - 252
Target Start/End: Complemental strand, 27682066 - 27681917
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttggggga-cataaatataggggaaaattcagaaatcttt-cacattttttgaaagag 203  Q
    ||||||||||||||||||| || || ||| ||||||| | ||||||  || |||||||||| ||||||||| | |||||||| || ||||||||||| |     
T  27682066 aggctttgtttgggagtttagatgggaggagaaggaaaggctttggaagaacataaatataagggaaaattgataaatcttttcatattttttgaaaaaa 27681967  T
Q  204 tatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||| ||||||   ||||||||||| ||||||||||||||||||||||    
T  27681966 tattttt-tagagagtgataaattaatgcttatgattaatatatttttaat 27681917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 2928050 - 2927958
Alignment:
Q  162 tataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||| ||||||||||||| ||||||||||||| |||||| || ||    ||||| ||||||||||||||||||||||||||||    
T  2928050 tataggggaaaattgagaaatctttcacgttttttgaaagagaatttttttatagggtgataaactaatgtttatgattaatatatttttaat 2927958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 243
Target Start/End: Complemental strand, 9773676 - 9773534
Alignment:
Q  102 acttaggctttgtttgggagtttggaaggaaggggaaggaatgactttggg--ggacataaatataggggaaaattcagaaatctttcacat-tttttga 198  Q
    |||| ||| ||||||||| ||||||| ||||||||||||||  ||||||||  ||| | ||||||||||||||||| |||| | |||||||| |||||||    
T  9773676 acttgggcattgtttggg-gtttggagggaaggggaaggaaatactttgggagggagagaaatataggggaaaattgagaatt-tttcacatctttttga 9773579  T
Q  199 aagagtatttttgtagagaaataaattaatgtttatgattaatat 243  Q
    |||||| ||||| | |||  ||||||||||| |||||||||||||    
T  9773578 aagagtgtttttatggagtgataaattaatgcttatgattaatat 9773534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 30697578 - 30697485
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||| ||||| | ||||  |||||||||||||||||| ||||||| |||||||  ||||| ||||||||||||||||||||||||||||    
T  30697578 aaatatagggggaaattgataaat--ttcacattttttgaaagattatttttttagagaatgataaactaatgtttatgattaatatatttttaat 30697485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 252
Target Start/End: Complemental strand, 48444721 - 48444619
Alignment:
Q  151 ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttt 248  Q
    ||||||||||||||| || |||||| | || |||||||||||||||  |||||||||||| ||||||   |||||| |||||||||||||||||||||||    
T  48444721 ggggacataaatatatgg-aaaattgataattctttcacatttttttgaagagtatttttttagagagtgataaatcaatgtttatgattaatatatttt 48444623  T
Q  249 taat 252  Q
    ||||    
T  48444622 taat 48444619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 36638031 - 36637917
Alignment:
Q  137 aaggaatgactttggg-ggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgttta 233  Q
    |||||||| || |||| ||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||||||   ||||||| |||  ||    
T  36638031 aaggaatggctctgggaggagataaatataggggaaaattgagaaatctttcacattttttgaaaaagtatttatttagagagtgataaattgatgcata 36637932  T
Q  234 tgattaatatatttt 248  Q
    |||||||||| ||||    
T  36637931 tgattaatatttttt 36637917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 252
Target Start/End: Complemental strand, 40674375 - 40674221
Alignment:
Q  101 gacttaggctttgtttgggagtttggaaggaaggggaaggaatgactttggg-ggacataaatataggggaaaattcagaaatctttcacattttttgaa 199  Q
    |||||||| |||||||| ||||||| | || | ||||||||| ||||||||| ||| | | ||||| || |||||| ||||| |||||||||||||||||    
T  40674375 gacttaggttttgtttgagagtttgtaggggatgggaaggaaagactttgggaggagagatatatatggaaaaattgagaaacctttcacattttttgaa 40674276  T
Q  200 agagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||| |||||| |||||    |||||| |||  || |||||||||||||||||||    
T  40674275 agagaatttttttagagtgtgataaatcaatacttgtgattaatatatttttaat 40674221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 252
Target Start/End: Complemental strand, 3537473 - 3537320
Alignment:
Q  102 acttaggctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaa 200  Q
    |||||||||||||||||||||||||| || | |||| || | | ||||| ||||    ||||||  ||||||||  |||||||||||| ||||||| |||    
T  3537473 acttaggctttgtttgggagtttggaggggaagggaggggaaggctttgaggggtggaaaatatgagggaaaatgaagaaatctttcaaattttttaaaa 3537374  T
Q  201 gagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||| |||| |||||||  |||||||||||  |||||||| ||||||||||||    
T  3537373 gagtagttttttagagaatgataaattaatgcatatgattactatatttttaat 3537320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 243
Target Start/End: Complemental strand, 9768424 - 9768300
Alignment:
Q  121 gtttggaaggaaggggaaggaatgactttggg--ggacataaatataggggaaaattcagaaatctttcacat-tttttgaaagagtatttttgtagaga 217  Q
    ||||||| || |||||||| || |||||||||  ||| | ||||||||||||||||| |||| | |||||||| ||||||||||||| ||||| |||||     
T  9768424 gtttggaggggaggggaagcaaagactttgggaaggagagaaatataggggaaaattgagaatt-tttcacatctttttgaaagagtgtttttttagagt 9768326  T
Q  218 aataaattaatgtttatgattaatat 243  Q
     ||||||||||| |||||||||||||    
T  9768325 gataaattaatgcttatgattaatat 9768300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 50201777 - 50201692
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaata 242  Q
    |||||||||| |||||| | |||||||||||| ||||||||||||||||||| |||||||   |||||||||| ||||||||||||    
T  50201777 aaatatagggaaaaattgaaaaatctttcacaatttttgaaagagtatttttttagagaatggtaaattaatgcttatgattaata 50201692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 4247306 - 4247231
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||| ||||||| |||||||| |||| |||||||  ||||||||||| ||||||||||||||||||||||    
T  4247306 aaatctttcatatttttttaaagagtaattttttagagaatgataaattaatgcttatgattaatatatttttaat 4247231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 32859038 - 32858944
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||    ||||||||||||||||||||||||||| |||| |||||||  ||||||||||  ||| ||||||||||||||||||    
T  32859038 aaatataggggaaaatggtaaaatctttcacattttttgaaagagtaatttt-tagagaatgataaattaatacttacgattaatatatttttaat 32858944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 18257600 - 18257675
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||||| |||| |||| ||| |||||||  ||||| |||||||||||||| |||||||||||||    
T  18257600 aaatctttcacattttttaaaagggtatatttttagagaatgataaactaatgtttatgattcatatatttttaat 18257675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 196
Target Start/End: Original strand, 40118717 - 40118809
Alignment:
Q  104 ttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacatttttt 196  Q
    |||||||||||||| ||||||||| || ||||||||||| | |||||||||  | |||||| | || ||||  ||||||||||||||||||||    
T  40118717 ttaggctttgtttgagagtttggagggtaggggaaggaagggctttgggggtgagaaatatcgagggaaatggagaaatctttcacatttttt 40118809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 252
Target Start/End: Complemental strand, 29623497 - 29623350
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttt-tgaaagagt 204  Q
    |||||||||||||||||||||| ||||| |||||| | | |||| ||||  | ||  |||| |||||| | |||||| |||||||||||| | |||||||    
T  29623497 aggctttgtttgggagtttggagggaagaggaagggagggctttaggggtgagaa--atagaggaaaaatgagaaatttttcacatttttctcaaagagt 29623400  T
Q  205 atttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    | |||| |||| ||  ||||| ||||| |||||||| |||||||||||||    
T  29623399 aattttttagaaaatgataaactaatgcttatgattcatatatttttaat 29623350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 252
Target Start/End: Original strand, 50345483 - 50345577
Alignment:
Q  161 atataggggaaaattcagaaatctttcacattttttgaaagagtatt-tttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||| |||||||| | | ||||||| |||||||||| ||| ||||||   |||||||||||||| ||||| |||||||||||||    
T  50345483 atataggggaaaattgagaaatctcttatattttttaaaagagtattatttttagagagtgataaattaatgtttgtgattgatatatttttaat 50345577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 3457470 - 3457564
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgt----agagaaataaattaatgtttatgattaatatattttt 249  Q
    |||||||||| |||||| |||||||||||||||||||||||| | ||| ||| |    ||||   |||||||||||||||||||||||| |||||    
T  3457470 aaatatagggaaaaattaagaaatctttcacattttttgaaaaattatatttattttaagagtggtaaattaatgtttatgattaatattttttt 3457564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 13638616 - 13638540
Alignment:
Q  179 aaatctttcaca-ttttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||| |||||| ||||||||  ||| |||||||  ||||||||||| ||||||||||||||||||||||    
T  13638616 aaatctttcacaattttttaaaagagtacatttttagagaatgataaattaatgcttatgattaatatatttttaat 13638540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 31651348 - 31651412
Alignment:
Q  190 attttttgaaagagtatttttgtagagaaa--taaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||| |||| |||||||   |||||||||| ||||||||||||||||||||||    
T  31651348 attttttgaaagagtaattttttagagaatgttaaattaatgcttatgattaatatatttttaat 31651412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 54748525 - 54748425
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtattt-----ttgtagagaa--ataaattaatgtttatgattaatatatttttaa 251  Q
    |||||||||| | |||| ||| |||||||||||| |||||||||||||||     || ||||||   ||||||||||| |||||||||||||||||||||    
T  54748525 aaatatagggaataattgagagatctttcacattctttgaaagagtatttaatttttttagagagtgataaattaatgcttatgattaatatatttttaa 54748426  T
Q  252 t 252  Q
    |    
T  54748425 t 54748425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 517512 - 517599
Alignment:
Q  167 gggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||| |||||||||||| | ||||| |||||||| |||| |||||||  |||||||||||  | |||||| ||||||||||||    
T  517512 gggaaaattgagaaatctttcaaaatttttaaaagagtagttttttagagaatgataaattaatgcatttgattactatatttttaat 517599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 252
Target Start/End: Original strand, 5939598 - 5939748
Alignment:
Q  105 taggctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagag 203  Q
    ||||||||||||||||||||||| || | || |||||| | ||||| ||||    ||||||| || || ||  |||||||||||| ||||||| ||||||    
T  5939598 taggctttgtttgggagtttggaggggaaggaaaggaaaggctttgaggggtgcaaaatataaggaaatatagagaaatctttcaaattttttaaaagag 5939697  T
Q  204 tatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    || |||| |||||||  |||| ||||||  |||||||| | ||||||||||    
T  5939698 tagttttttagagaatgataatttaatgcatatgattactttatttttaat 5939748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 49304391 - 49304322
Alignment:
Q  184 tttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||  | ||||| || ||||  ||||||||||||||||||||||||||||||||||    
T  49304391 tttcacattttttgaaagctttttttt-taaagaatgataaattaatgtttatgattaatatatttttaat 49304322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 53620429 - 53620359
Alignment:
Q  160 aatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaat 228  Q
    ||||||||  ||| || ||||||||| |||||||||||||||||||||||| |||||||  ||||||||||    
T  53620429 aatataggaaaaatttgagaaatcttacacattttttgaaagagtatttttttagagaatgataaattaat 53620359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 54089346 - 54089422
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaaat---aaattaatgtttatgattaatatatttttaat 252  Q
    |||| ||||| |||||||||||||||| |||| || | ||||   ||||||||||| ||||||||||||||||||||    
T  54089346 aaatgtttcaaattttttgaaagagtaattttttaaaaaaatgataaattaatgttaatgattaatatatttttaat 54089422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 38401802 - 38401882
Alignment:
Q  170 aaaattcagaaatctttcacattttttgaaagagtatttttgt--agagaaataaattaatgtttatgattaatatatttt 248  Q
    |||||| | |||||||||||||||||| ||||||| ||||| |  ||||  ||||| |||||||||| |||||||||||||    
T  38401802 aaaatttaaaaatctttcacattttttaaaagagtgtttttttaaagagtgataaactaatgtttataattaatatatttt 38401882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 51686707 - 51686623
Alignment:
Q  167 gggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    ||||||||  |||||||||| | |||||||||||| ||| |||| |||||||  |||||||||||  |||||||| |||||||||    
T  51686707 gggaaaatgaagaaatcttttaaattttttgaaagtgtacttttttagagaatgataaattaatgcatatgattactatattttt 51686623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 15499191 - 15499262
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttt 248  Q
    |||||||||||||||||||||| ||||  ||| |||||||  ||||| ||||  ||||||||||||||||||    
T  15499191 aaatctttcacattttttgaaatagtaaatttttagagaatgataaaataatacttatgattaatatatttt 15499262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 30996285 - 30996190
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgta--gagaaataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||| ||||||| ||||||| |||||||||||   ||| || | |||| ||  |||  ||||||||||||||||||||| ||||||||||||    
T  30996285 aaatatagaggaaaatacagaaatgtttcacattttccaaaaaagaaattttttaaggagtgataaattaatgtttatgattactatatttttaat 30996190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 34729218 - 34729304
Alignment:
Q  167 gggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||  |||||| ||||||||||||| ||||||||  |||  ||||||  |||||||||| |||||||||| ||||||||||||    
T  34729218 gggaaaatggagaaatttttcacatttttt-aaagagtaaattttaagagaatgataaattaatatttatgattactatatttttaat 34729304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 42134582 - 42134657
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaaa--taaattaatgtttatgattaatatatttttaat 252  Q
    |||||||| ||||||||  |||||| | |||| |||||||   |||| ||||||||||||||||||||||||||||    
T  42134582 aaatctttaacatttttcaaaagagcaattttttagagaatgctaaactaatgtttatgattaatatatttttaat 42134657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 42261681 - 42261609
Alignment:
Q  146 ctttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa 218  Q
    |||||||||  | |||||||||| |||||  | || |||| ||||||||||||| ||||||||||||||||||    
T  42261681 ctttgggggtgagaaatatagggaaaaatagaaaagtcttccacattttttgaaggagtatttttgtagagaa 42261609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 218 - 249
Target Start/End: Complemental strand, 7965164 - 7965133
Alignment:
Q  218 aataaattaatgtttatgattaatatattttt 249  Q
    ||||||||||||||||||||||||||||||||    
T  7965164 aataaattaatgtttatgattaatatattttt 7965133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 11500281 - 11500219
Alignment:
Q  190 attttttgaaagagt-atttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    ||||||||||||| | |||||| |||||||  |||||||||||||||| ||||||||||||||    
T  11500281 attttttgaaagaatgatttttttagagaatgataaattaatgtttataattaatatattttt 11500219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 42157707 - 42157785
Alignment:
Q  177 agaaatctttcacatttttt-gaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||| ||||||||||||| ||||||||  ||||| ||||||  |||||| ||||||||| ||| |||||||||||||    
T  42157707 agaaatatttcacatttttttgaaagagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaat 42157785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 46017098 - 46017145
Alignment:
Q  104 ttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgg 151  Q
    |||||||||||||||||||||||| ||||||||| |||| || |||||    
T  46017098 ttaggctttgtttgggagtttggagggaaggggagggaaggattttgg 46017145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 17642772 - 17642703
Alignment:
Q  185 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||| ||||| || |||| |||||||  ||||| |||| ||||||||||||||| |||||||    
T  17642772 ttcacatttttttaaagaatagttttttagagaatgataaactaatatttatgattaatatacttttaat 17642703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 250
Target Start/End: Complemental strand, 23568252 - 23568179
Alignment:
Q  179 aaatctttcacattttttgaaagagta--tttttgtagagaaataaattaatgtttatgattaatatattttta 250  Q
    ||||||||| |||||||||||||| ||  ||||| ||||   ||||||||||| |||||||||||||| |||||    
T  23568252 aaatctttcgcattttttgaaagaataactttttttagaatgataaattaatgattatgattaatatactttta 23568179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 252
Target Start/End: Original strand, 33281540 - 33281682
Alignment:
Q  105 taggctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaagag 203  Q
    ||||||||||||||||||| ||| || | || |||| | |||||||| |||    ||||||||||||||||    |||  ||||||||||||||||||||    
T  33281540 taggctttgtttgggagttaggaggggatggaaagggaagactttggagggttgaaaatataggggaaaatggtaaaaaatttcacattttttgaaagag 33281639  T
Q  204 tatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||        |||||  |||| |||||||||||||||||||||||||||||    
T  33281640 ta--------gagaatgataagttaatgtttatgattaatatatttttaat 33281682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 19148314 - 19148281
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||| ||||||||||||||||||||||    
T  19148314 ataaattaatgcttatgattaatatatttttaat 19148281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 54126469 - 54126377
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    ||||||||||||| ||  |||||||||||| |   ||||||||| | ||||| || ||||  ||||||||||| |||||| ||||||||||||    
T  54126469 aaatataggggaacatggagaaatctttcaaaaaatttgaaagaatgtttttttaaagaatgataaattaatgattatgaataatatattttt 54126377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 33944454 - 33944494
Alignment:
Q  102 acttaggctttgtttgggagtttggaaggaaggggaaggaa 142  Q
    |||||||||||||||||||||||||| |||| || ||||||    
T  33944454 acttaggctttgtttgggagtttggagggaaaggaaaggaa 33944494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 15803435 - 15803297
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttgaaagagt 204  Q
    |||||||||||||||||||||| || ||||||||||| | ||||||||| | | ||||||||||||||||| ||||||||||||||||||||||||||||    
T  15803435 aggctttgtttgggagtttggaggggaggggaaggaaaggctttggggggagagaaatataggggaaaattgagaaatctttcacattttttgaaagagt 15803336  T
Q  205 atttttgtagaga--aataaattaatgtttatgattaat 241  Q
    |||||| ||||||   ||||||||||| |||||||||||    
T  15803335 atttttttagagagtgataaattaatgcttatgattaat 15803297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 11522026 - 11522147
Alignment:
Q  132 aggggaaggaatgacttt-gggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaaataaattaatgt 230  Q
    ||||||||||| | |||| |||||| | |||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  11522026 aggggaaggaaaggctttagggggatagaaatatagggaaaaattgagaaatctttcacattttttgaaagagtatttttttagagtgataaattaatgt 11522125  T
Q  231 ttatgattaatatatttttaat 252  Q
    ||| ||||||||||||||||||    
T  11522126 ttaagattaatatatttttaat 11522147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 103 - 245
Target Start/End: Original strand, 31584582 - 31584727
Alignment:
Q  103 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaag 201  Q
    |||||| |||||||| ||||||||| || |||||||| || ||||||| ||||| | |||||||| | |||||| |||||||||||| ||||||||||||    
T  31584582 cttaggttttgtttgagagtttggaggggaggggaagaaaagactttgaggggagagaaatatagagaaaaattgagaaatctttcagattttttgaaag 31584681  T
Q  202 agtatttttgtagaga--aataaattaatgtttatgattaatatat 245  Q
      ||||||| ||||||   ||||||||||| |||||||||||||||    
T  31584682 gatatttttttagagacggataaattaatgcttatgattaatatat 31584727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 36031002 - 36030907
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||| |||| |||||  ||||||||||||||||||| |||||||||||||| |||||||  ||||||||||| ||||||||||||||||||||||    
T  36031002 aaatacagggaaaaatggagaaatctttcacatttttggaaagagtatttttttagagaatgataaattaatgcttatgattaatatatttttaat 36030907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 12941669 - 12941764
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||||||||||||||||| ||||||||||| | |||||||  |||||   ||||||||| ||||||| ||||||||||||||||    
T  12941669 aaatataggggaaaattcagaaatctttcaaattttttgaaaaaatattttttcagagagtgataaattaacgtttatggttaatatatttttaat 12941764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 16625677 - 16625771
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||| || ||||  |||||||||||||||||||||||||||||||||| |||||||  |||||  |||| |||||||| |||||||||||||    
T  16625677 aaatatagagggaaatggagaaatctttcacattttttgaaagagtattttt-tagagaatgataaaccaatgcttatgattcatatatttttaat 16625771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 239
Target Start/End: Complemental strand, 27987931 - 27987793
Alignment:
Q  103 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaag 201  Q
    |||||| |||||||| ||||||||| || |||| ||||||   |||||| |||| | |||| |||| ||||| | ||||||||||||||||| |||||||    
T  27987931 cttaggttttgtttgagagtttggaggggaggg-aaggaagagctttggagggatagaaatgtaggagaaaagtgagaaatctttcacatttgttgaaag 27987833  T
Q  202 agtatttttgtagaga--aataaattaatgtttatgatta 239  Q
    ||| ||||||||||||   ||||||||||| |||||||||    
T  27987832 agtgtttttgtagagagtgataaattaatgcttatgatta 27987793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 239
Target Start/End: Complemental strand, 28074464 - 28074326
Alignment:
Q  103 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaag 201  Q
    |||||| |||||||| ||||||||| || |||| ||||||   |||||| |||| | |||| |||| ||||| | ||||||||||||||||| |||||||    
T  28074464 cttaggttttgtttgagagtttggaggggaggg-aaggaagagctttggagggatagaaatgtaggagaaaagtgagaaatctttcacatttgttgaaag 28074366  T
Q  202 agtatttttgtagaga--aataaattaatgtttatgatta 239  Q
    ||| ||||||||||||   ||||||||||| |||||||||    
T  28074365 agtgtttttgtagagagtgataaattaatgcttatgatta 28074326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 30523466 - 30523391
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||||||||||| |||| || ||||  ||||||||||  ||||||||||||||||||||||    
T  30523466 aaatctttcacattttttgaaagagtagttttttaaagaatgataaattaatacttatgattaatatatttttaat 30523391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 30265251 - 30265325
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaa 251  Q
    |||||||| | |||||||||||||||| |||| |||||||  ||||||||||| |||||||||||||||||||||    
T  30265251 aaatcttttatattttttgaaagagtaattttttagagaataataaattaatgcttatgattaatatatttttaa 30265325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 252
Target Start/End: Complemental strand, 36870499 - 36870357
Alignment:
Q  108 gctttgtttgggagtttggaaggaagg-ggaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttgaaagagta 205  Q
    ||||| |||||||||||||| || ||| |||||||| | ||||||||| | | ||||||||||||||||| |||||| ||||||| ||||||||||  |     
T  36870499 gctttatttgggagtttggaggggaggaggaaggaaaggctttggggggagaaaaatataggggaaaattgagaaatttttcacaatttttgaaagtatt 36870400  T
Q  206 tttttgtagagaaataaattaatgtttatgattaatatatttttaat 252  Q
    |||||  ||||  ||||||||||||     |||||||||||||||||    
T  36870399 tttttagagagtgataaattaatgta----attaatatatttttaat 36870357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 5322000 - 5322095
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgt-agagaaa--taaattaatgtttatgattaatatatttttaa 251  Q
    ||||||||||||||||   |||||||||||||||||| |||||||||||||| | ||||||   || ||||||| |||||||| ||||||||||||    
T  5322000 aaatataggggaaaatggtgaaatctttcacatttttagaaagagtattttttttagagaatgctatattaatgcttatgattgatatatttttaa 5322095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 16465032 - 16465123
Alignment:
Q  161 atataggggaaaattcagaaatctttcacattttttgaaagag-tatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    |||||| |||||||  ||||||||||||||||||||||||||| | ||||| |||  ||  ||||||||||||||||||||| |||||||||    
T  16465032 atatagaggaaaatagagaaatctttcacattttttgaaagagttgtttttttagtaaatgataaattaatgtttatgattactatattttt 16465123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 33206976 - 33206901
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgatt-aatatatttttaa 251  Q
    |||||||||||||||||||||||||| ||||| |||||||   |||||||||| |||||||| |||||||||||||    
T  33206976 aaatctttcacattttttgaaagagtgtttttttagagaatgttaaattaatgcttatgattaaatatatttttaa 33206901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 4666323 - 4666253
Alignment:
Q  180 aatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttt 248  Q
    ||||||||| ||||||||||||||||||||  ||||||   ||||||||||| ||||||||||||||||||    
T  4666323 aatctttcatattttttgaaagagtattttattagagagtgataaattaatgcttatgattaatatatttt 4666253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 32761176 - 32761253
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||||||||  |||||||| |||||||  |||| || || ||||||||| |||||||||||||    
T  32761176 agaaatctttcacattttttgaaaatgtatttttttagagaatgataattttatatttatgattgatatatttttaat 32761253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 41503346 - 41503269
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttt-tgtagagaa--ataaattaatgtttatgattaatatatttttaa 251  Q
    |||||| ||| |||||||||||||||||| ||| | |||||||  ||||||||||| |||||||||||||||||||||    
T  41503346 agaaattttttacattttttgaaagagtagtttgtttagagaatgataaattaatgattatgattaatatatttttaa 41503269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 9087597 - 9087665
Alignment:
Q  186 tcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||| ||| ||||||||| || |||   ||||||||||||||||||||||||||||||||||    
T  9087597 tcacattttttcaaaaagtatttttttaaagagtgataaattaatgtttatgattaatatatttttaat 9087665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 26618497 - 26618569
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    |||||||||||||| ||||||| |||| |||| || ||||  |||||||||||||||||| ||||||||||||    
T  26618497 aaatctttcacattatttgaaacagtaattttataaagaatgataaattaatgtttatgactaatatattttt 26618569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 252
Target Start/End: Original strand, 5002659 - 5002754
Alignment:
Q  160 aatataggggaaaattcagaaatctttcacattttttgaaagagta--tttttgtagagaaataaattaatg-tttatgattaatatatttttaat 252  Q
    |||||||||||||||    |||||||| |||||||||||||||| |  |||||  ||||| ||||||||||| ||||||||| |||||||||||||    
T  5002659 aatataggggaaaatagtaaaatcttttacattttttgaaagagaaattttttaaagagagataaattaatgttttatgattgatatatttttaat 5002754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 32951066 - 32950991
Alignment:
Q  179 aaatctttcacattttttgaaagagtat-ttttgtagagaa--ataaattaatgtttatgattaatatatttttaa 251  Q
    ||||||||||||| |||| ||||||||  |||| |||||||  |||||||||| ||||||||||||||||||||||    
T  32951066 aaatctttcacatcttttaaaagagtaacttttttagagaatgataaattaatatttatgattaatatatttttaa 32950991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 38325316 - 38325218
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacatttttt-gaaagagta--tttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||| |||||||  | |||||||||||||||||| ||||||||   ||||| |||||||  ||||||||||| |||||||| |||||||||||||    
T  38325316 aaatatagaggaaaatggaaaaatctttcacatttttttgaaagagtgattttttttagagaatgataaattaatgattatgattcatatatttttaat 38325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 39820049 - 39819958
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagta-tttttgtagagaa--ataaattaatgtttatgattaatatattt 247  Q
    ||||||||||||||||    |||||||||||||||| |||| || || |||||| | ||||  |||||||||||||||||||||||||||||    
T  39820049 aaatataggggaaaatggtaaaatctttcacattttctgaacgactaatttttggatagaatgataaattaatgtttatgattaatatattt 39819958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 252
Target Start/End: Original strand, 1270533 - 1270670
Alignment:
Q  119 gagtttggaaggaaggggaaggaatgactttgggggacataaa-tataggggaaaattcagaaatctttcacattttttgaaagagta-tttttgtagag 216  Q
    ||||||||| || ||| ||| ||| ||||||| |||| | ||| |||  |||| |||| |||||||||| | ||||||| |||||||| ||||| |||||    
T  1270533 gagtttggaggggaggagaatgaaagactttgagggatagaaaatatgagggagaattgagaaatcttttaaattttttaaaagagtagtttttttagag 1270632  T
Q  217 aa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||  |||||||||||  |||||||| ||||||||||||    
T  1270633 aatgataaattaatgcatatgattactatatttttaat 1270670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 3254806 - 3254729
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||||||  ||||||| ||||| ||||||  ||||| |||||  | ||||||||||||||||||||    
T  3254806 agaaatctttcacatttttgtaaagagtgtttttttagagagtaataatttaattctaatgattaatatatttttaat 3254729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 3022842 - 3022809
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||||||||||||||||||    
T  3022842 ataaattaatgtttatgattaatatatttttaat 3022809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 7367779 - 7367695
Alignment:
Q  167 gggaaaattcagaaatctttcacattttttgaaagagta-tttttgtagagaa--ataaattaatgtttatgattaatatatttt 248  Q
    ||||||||  |||||||||||||||||||| ||||| || ||||| |||||||  |||||||||||| |||||||  ||||||||    
T  7367779 gggaaaatgaagaaatctttcacatttttttaaagaatagtttttttagagaatgataaattaatgtctatgattgttatatttt 7367695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 252
Target Start/End: Original strand, 13018293 - 13018445
Alignment:
Q  103 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaag 201  Q
    ||||||||||||||||||||||||| || | || |||||| | ||||| ||||    ||||||  |  |||||  ||||||||||||  |||||| ||||    
T  13018293 cttaggctttgtttgggagtttggaggggaaggaaaggaaaggctttgaggggtgcaaaatatgtgaaaaaatagagaaatctttcaatttttttaaaag 13018392  T
Q  202 agtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||| |||| |||||||  |||||||||||  |||||||| | ||||||||||    
T  13018393 agtagttttttagagaatgataaattaatgcatatgattactttatttttaat 13018445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 14385269 - 14385194
Alignment:
Q  179 aaatctttcacattttttgaaa-gagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||||||||| ||  |||||| |||||||  |||||||||||||||| |||| ||||||||||||    
T  14385269 aaatctttcacattttttgaaaagatgattttt-tagagaatgataaattaatgtttattattagtatatttttaat 14385194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 29880954 - 29880878
Alignment:
Q  178 gaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||  |||||||||||| | |||| |||||||  |||||  |||| ||||||||||||||||||||||    
T  29880954 gaaatctttcactgtttttgaaagagcaattttttagagaatgataaacgaatgcttatgattaatatatttttaat 29880878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 39913420 - 39913387
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||||||||||||||||||    
T  39913420 ataaattaatgtttatgattaatatatttttaat 39913387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 42946658 - 42946691
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||||||||||||||||||    
T  42946658 ataaattaatgtttatgattaatatatttttaat 42946691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 26599128 - 26599219
Alignment:
Q  160 aatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    |||||||||||||||  |||||||||| | |   ||||||| ||||||||| |||||||  ||||| ||||  |||||||||||||||||||    
T  26599128 aatataggggaaaatggagaaatcttttaaaacatttgaaaaagtatttttctagagaatgataaaataatacttatgattaatatattttt 26599219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 39670072 - 39670146
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||||||| ||||    ||| | |||||||  ||||||||||||||||||| ||||||||||||||    
T  39670072 agaaatctttcacattttttaaaagg---tttatttagagaatgataaattaatgtttatgatcaatatatttttaat 39670146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 13767597 - 13767532
Alignment:
Q  189 cattttttgaaagagtatttttgt-agagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||| |||| | ||||||  |||||| |||||||||||||||||||||||||||    
T  13767597 cattttttgaaagagtaattttattagagaatgataaat-aatgtttatgattaatatatttttaat 13767532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 16518979 - 16519056
Alignment:
Q  177 agaaatctttcacatttttt-gaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||||||| |||||||| ||||| | |||||  ||||| ||||| |||||||| |||||||||||||    
T  16518979 agaaatctttcacatttttttgaaagagtgttttt-tggagaatcataaactaatgcttatgattcatatatttttaat 16519056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 221 - 252
Target Start/End: Original strand, 17514933 - 17514964
Alignment:
Q  221 aaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||||||||||||||||    
T  17514933 aaattaatgtttatgattaatatatttttaat 17514964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 142
Target Start/End: Complemental strand, 31083064 - 31083025
Alignment:
Q  103 cttaggctttgtttgggagtttggaaggaaggggaaggaa 142  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  31083064 cttaggctttgtttgggagtttggaggggaggggaaggaa 31083025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 44656647 - 44656717
Alignment:
Q  184 tttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||| |||| |||| |||| |||| |   |||||||||| |||||||||||||||||||||||    
T  44656647 tttcacatttttcgaaaaagtaattttttagatagtgataaattaatttttatgattaatatatttttaat 44656717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 10820729 - 10820660
Alignment:
Q  179 aaatctttcacattttttg-aaagagtatttttgtagagaa--ataaattaatgtttatgattaatatat 245  Q
    |||||||| |||||||||  |||||||| |||| |||||||  |||| ||||||||||||||||||||||    
T  10820729 aaatcttttacattttttttaaagagtaattttttagagaacgataagttaatgtttatgattaatatat 10820660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 26427718 - 26427646
Alignment:
Q  184 tttcacattttttgaaagagtatttt--tgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||| ||| ||||||||||||  | |||||||  ||| ||||||| ||||||||||||||||||||||    
T  26427718 tttcacattgtttaaaagagtattttattttagagaatgatatattaatgcttatgattaatatatttttaat 26427646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 31550160 - 31550229
Alignment:
Q  185 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||||| || |||| |||||||  ||||| ||||  |||||||||||||| |||||||    
T  31550160 ttcacattttttgaaagaatagttttttagagaatgataaactaatagttatgattaatatacttttaat 31550229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 34757805 - 34757720
Alignment:
Q  169 gaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||| |||||||||||| |  |||  |||||||| |||  |||||||  |||||||||||| |||||||| ||||||||||||    
T  34757805 gaaaattgagaaatctttcaaaaatttgaaaagagtaatttcttagagaatgataaattaatgtatatgattattatatttttaat 34757720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 9087399 - 9087432
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||| ||||||||||||||||||||||    
T  9087399 ataaattaatgcttatgattaatatatttttaat 9087432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 14008147 - 14008195
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttggggg 154  Q
    |||||||||||||||||||||| || | |||| || |||||||||||||    
T  14008147 aggctttgtttgggagtttggaggggaagggaggggatgactttggggg 14008195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 39205218 - 39205131
Alignment:
Q  167 gggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||  |||||||||||| |   ||| |||||||| |||| ||||||   |||||||||||| |||||||| ||||||||||||    
T  39205218 gggaaaatgtagaaatctttcaaaaaatttaaaagagtagttttttagagagtgataaattaatgtatatgattactatatttttaat 39205131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 7e-33; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 106 - 252
Target Start/End: Original strand, 40422891 - 40423040
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagta 205  Q
    ||||||||||||||||||| ||||| | | |||| || | ||||||||  |||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  40422891 aggctttgtttgggagtttagaagggatgagaagaaaaggctttggggatcataaatatatgggaaaattgagaaatctttcacaatttttgaaagagta 40422990  T
Q  206 tttttgt---agagaaataaattaatgtttatgattaatatatttttaat 252  Q
    ||||| |   ||||  |||||||||| |||||||||||||||||||||||    
T  40422991 ttttttttagagagtgataaattaatatttatgattaatatatttttaat 40423040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 28880229 - 28880105
Alignment:
Q  130 gaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaatta 226  Q
    |||||| |||||| ||||||| ||||| | ||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||   ||||||||    
T  28880229 gaagggaaaggaa-gactttgaggggagagaaatataggggaaaattgagaaatcttttacattttttgaaagagtatttttttagagagtgataaatta 28880131  T
Q  227 atgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||||||||||    
T  28880130 atgtttatgattaatatatttttaat 28880105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 104 - 245
Target Start/End: Original strand, 31418776 - 31418916
Alignment:
Q  104 ttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagag 203  Q
    |||||||||||||| ||||||||| || || |||||||||||||||| ||||   |||||||||  |||||| | |||||||||||| ||||||||||||    
T  31418776 ttaggctttgtttgagagtttggaggggagaggaaggaatgactttgaggga---aaatataggaaaaaattgataaatctttcacagtttttgaaagag 31418872  T
Q  204 tatttttgtagaga--aataaattaatgtttatgattaatatat 245  Q
    ||||| | ||||||   ||||||||||| |||||||||||||||    
T  31418873 tatttgtttagagagtgataaattaatgcttatgattaatatat 31418916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 252
Target Start/End: Complemental strand, 18397148 - 18397027
Alignment:
Q  134 gggaaggaatgactttgggggac-ataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgt 230  Q
    ||||||||| ||||||||||| | | |||||||| |||||||| |||||||||||||||||||||||||||||||||  || |||   ||||||||| |     
T  18397148 gggaaggaaagactttgggggtcgagaaatatagaggaaaattgagaaatctttcacattttttgaaagagtattttcttaaagagtgataaattaaagc 18397049  T
Q  231 ttatgattaatatatttttaat 252  Q
    ||||||||||||||| ||||||    
T  18397048 ttatgattaatatatatttaat 18397027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 252
Target Start/End: Complemental strand, 18399836 - 18399715
Alignment:
Q  134 gggaaggaatgactttgggggac-ataaatataggggaaaattcagaaatctttcacattttttgaaagagtattt--ttgtagagaaataaattaatgt 230  Q
    ||||||||| ||||||||| | | | |||||||| |||||||| |||||||||||| |||||||||||||||||||  ||  |||| ||||||||||||     
T  18399836 gggaaggaaagactttgggagtcgagaaatatagaggaaaattgagaaatctttcaaattttttgaaagagtattttcttaaagagtaataaattaatgc 18399737  T
Q  231 ttatgattaatatatttttaat 252  Q
    ||||||||||||||| ||||||    
T  18399736 ttatgattaatatatatttaat 18399715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 252
Target Start/End: Original strand, 55813453 - 55813594
Alignment:
Q  110 tttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttt 209  Q
    ||||||||| |||||||| || || | ||| || | |||||||||| | |||||||||| |||| | | ||||| |||||||||||||||||||||||||    
T  55813453 tttgtttggaagtttggaggggagtgaaagaaaaggctttgggggataaaaatatagggaaaaaataaaaaatcattcacattttttgaaagagtatttt 55813552  T
Q  210 tgtagagaaataaattaatgtttatgattaatatatttttaat 252  Q
    |  || |  ||||||||||| ||||||||||||||||| ||||    
T  55813553 ta-agtgtgataaattaatgcttatgattaatatatttataat 55813594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 6836608 - 6836514
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||| ||||  ||| |||  ||||||||||| ||||||||||||||||||||||    
T  6836608 aaatataggagaaaattgagaactctttcacattttttgaaagagt-ttttgttagtgaatgataaattaatgcttatgattaatatatttttaat 6836514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 103 - 252
Target Start/End: Complemental strand, 48620546 - 48620403
Alignment:
Q  103 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttgaaag 201  Q
    ||||||||||||||| ||||||||| || ||||||||||| | ||||||||| | | |||||||||| |||||| |       |||||||||||||||||    
T  48620546 cttaggctttgtttgcgagtttggaggggaggggaaggaaaggctttggggggagagaaatatagggaaaaattga-------ttcacattttttgaaag 48620454  T
Q  202 agtatttttgtagagaaataaattaatgtttatgattaatatatttttaat 252  Q
    | |||||||  | ||  ||||||| ||| ||||||||||||||||||||||    
T  48620453 aatattttttcacagtgataaattcatgcttatgattaatatatttttaat 48620403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 249
Target Start/End: Original strand, 13984796 - 13984937
Alignment:
Q  109 ctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtattt 208  Q
    ||||||||  ||||||||| || |||||| |||| |  || |||||| | |||| ||  |||||||| || ||||||||| |||||||||||||||||||    
T  13984796 ctttgttttagagtttggaggggaggggagggaaggttttggggggagagaaatgtaaaggaaaattgaggaatctttcatattttttgaaagagtattt 13984895  T
Q  209 ttgtagaga--aataaattaatgtttatgattaatatattttt 249  Q
    || ||||||  |||||||||||| ||||||||||||| |||||    
T  13984896 tt-tagagagtaataaattaatgcttatgattaatatcttttt 13984937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 228
Target Start/End: Complemental strand, 42650895 - 42650772
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggac-ataaatataggggaaaattcagaaatctttcacattttttgaaagagt 204  Q
    |||||||||||| ||||||||| || | ||||||||| | |||||||||   | |||||||||| |||||| | |||||||||||| |||||||||||||    
T  42650895 aggctttgtttgtgagtttggaggggaagggaaggaagggctttggggggtgagaaatatagggaaaaattgataaatctttcacaatttttgaaagagt 42650796  T
Q  205 atttttgtagagaaataaattaat 228  Q
     ||||| |||||  ||||||||||    
T  42650795 gtttttttagagtgataaattaat 42650772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 42759524 - 42759618
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaaata-aattaatgtttatgattaatatatttttaat 252  Q
    ||||||| |||||||||   |||||||||||||||||||||||||||  ||| |||||||  | |||||| ||||||||||||||||||||||||    
T  42759524 aaatatatgggaaaattgtaaaatctttcacattttttgaaagagtaaatttttagagaatgataattaacgtttatgattaatatatttttaat 42759618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 252
Target Start/End: Original strand, 46176772 - 46176904
Alignment:
Q  121 gtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa-- 218  Q
    ||||||| || ||||||||| | |||||||||||    ||||| || || ||||  ||||||||| |||||||||||||||||||||||| |||||||      
T  46176772 gtttggaggggaggggaagggaagactttgggggtggaaaataaagagggaaatggagaaatctt-cacattttttgaaagagtatttttttagagaatg 46176870  T
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||| ||||| |||||||| |||||||||||||    
T  46176871 ataaactaatggttatgattcatatatttttaat 46176904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 170 - 252
Target Start/End: Original strand, 46669827 - 46669912
Alignment:
Q  170 aaaattcagaaatctttcacattttttgaaagagta-tttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||| |||||||||||||||||||| |||||||| ||||| |||||||  ||||||| ||| ||||||||||||||||||||||    
T  46669827 aaaattgagaaatctttcacatttttttaaagagtattttttttagagaatgataaatttatgcttatgattaatatatttttaat 46669912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 49936689 - 49936616
Alignment:
Q  181 atctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||| | |||||||||| |||||||  ||||||||||| ||||||||||||||||||||||    
T  49936689 atctttcacattttttgtaggagtatttttttagagaatgataaattaatgcttatgattaatatatttttaat 49936616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 21443244 - 21443136
Alignment:
Q  146 ctttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtag--agaaataaattaatgtttatgattaatat 243  Q
    ||||| || ||||||||||| ||||||||| | |||||||||| ||||||||||||||||| ||| |||   |  ||||||||||| |||| ||||||||    
T  21443244 ctttgaggaacataaatatatgggaaaattaataaatctttcatattttttgaaagagtatgtttttagtaggtgataaattaatgcttattattaatat 21443145  T
Q  244 atttttaat 252  Q
    |||||||||    
T  21443144 atttttaat 21443136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 248
Target Start/End: Original strand, 9119112 - 9119210
Alignment:
Q  151 ggggacataaatataggggaaaattcagaaatctttcacatttt-ttgaaagagtatttttgtagagaaataaattaatgtttatgattaatatatttt 248  Q
    |||||||||||||||| |||||||| |||||||||||| ||||| |||||||  ||| |||  ||||  |||||||||||  |||||||||||||||||    
T  9119112 ggggacataaatatagaggaaaattgagaaatctttcatattttgttgaaagtatatgtttagagagtgataaattaatgcatatgattaatatatttt 9119210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 30307569 - 30307483
Alignment:
Q  167 gggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga-aataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||| |||||||||||||||||||| || |||||||||| ||||||    ||| ||||| ||||||||||||||||||||||    
T  30307569 gggaaaattgagaaatctttcacatttttttaatgagtatttttttagagagtgaaaaataatgcttatgattaatatatttttaat 30307483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 45022427 - 45022504
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||||||||||||||||||||| |||||||  |||||| |||| ||||||| || || ||||||||    
T  45022427 agaaatctttcacattttttgaaagagtatttttttagagaactataaatgaatgcttatgatcaacatgtttttaat 45022504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 201
Target Start/End: Complemental strand, 6121523 - 6121430
Alignment:
Q  109 ctttgtttgggagtttggaaggaaggggaaggaatgactttgggggac-ataaatataggggaaaattcagaaatctttcacattttttgaaag 201  Q
    |||| |||||||||||| | || ||||||||||| |||||||| |||  | ||||||| ||||||||| ||||||||||||||| |||||||||    
T  6121523 ctttatttgggagtttgtaggggaggggaaggaaagactttggaggaagagaaatataagggaaaattgagaaatctttcacatattttgaaag 6121430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 34713137 - 34713067
Alignment:
Q  180 aatctttcacattttttgaaagagtatttttgtagagaaataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||| ||||||||| ||  ||||||||||  |||||| |||||||||||||||||||||||||||    
T  34713137 aatctttcacatattttgaaagtgt--ttttgtagagtgataaatgaatgtttatgattaatatatttttaat 34713067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 15451229 - 15451304
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||||||||||| |||| || | ||  ||||||||||| ||||||||||||||||| ||||    
T  15451229 aaatctttcacattttttgaaagagtaattttttaaataatgataaattaatgcttatgattaatatatttctaat 15451304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 24662639 - 24662714
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||| |||||||||| |||| |||||||  |||||| |||| ||||||||||||| ||||||||    
T  24662639 aaatctttcacattttctgaaagagtaattttttagagaatgataaatcaatgcttatgattaatatttttttaat 24662714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 18318888 - 18318962
Alignment:
Q  180 aatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||| ||||||||||||||||||||  || |||  |||||||||||| ||||||||||||||| ||||||    
T  18318888 aatctttcaaattttttgaaagagtattttcttaaagagtaataaattaatgcttatgattaatatatatttaat 18318962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 24802673 - 24802754
Alignment:
Q  169 gaaaattcagaaatctttcacattttttgaaagagtatttttgta--gagaaataaattaatgtttatgattaatatatttt 248  Q
    ||||||| | |||||||||||||||||||||| |||||||||  |  |||  ||||||||||| ||||||||||||||||||    
T  24802673 gaaaattgaaaaatctttcacattttttgaaaaagtattttttcagggagtgataaattaatgattatgattaatatatttt 24802754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 27143429 - 27143379
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttt 209  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  27143429 aaatatatgggaaaaatgagaaatctttcacattttttgaaagagtatttt 27143379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 249
Target Start/End: Complemental strand, 42954823 - 42954725
Alignment:
Q  153 ggacataaatataggggaaaattcagaaat-ctttcacattttttgaaagagtat-ttttgtagagaaataaattaatgtttatgattaatatattttt 249  Q
    ||||| ||||||| |||| |||| |||||| |||||||| ||||||||||||| | ||||  ||||  ||||| |||||||||||||||||||||||||    
T  42954823 ggacaaaaatataagggagaattaagaaatactttcacaatttttgaaagagtttcttttagagagtgataaactaatgtttatgattaatatattttt 42954725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 8828102 - 8828174
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    |||| |||||||||||| ||| ||| | |||| |||||||  |||||||||||||||||||||||||||||||    
T  8828102 aaatgtttcacatttttcgaatgagcaattttttagagaatgataaattaatgtttatgattaatatattttt 8828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 9021143 - 9021051
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    ||||||||||||||||    |||||||||||||||||| ||||| || |||| ||||| |  ||||||||||| ||||| |||||||||||||    
T  9021143 aaatataggggaaaatggtaaaatctttcacattttttaaaagattaattttttagagtatgataaattaatgcttatggttaatatattttt 9021051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 25844026 - 25843959
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatat 243  Q
    |||||||||||| |||||| ||||||||| |||| |||||||  |||||||||||||||||||||||||    
T  25844026 agaaatctttcatattttt-gaaagagtaattttttagagaagaataaattaatgtttatgattaatat 25843959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 252
Target Start/End: Original strand, 41495461 - 41495607
Alignment:
Q  109 ctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatt 207  Q
    ||||||||| |||||||||| ||| ||||| ||| || ||||| |||  | |||||||| | |||||    |||||||| | ||||||| || ||||| |    
T  41495461 ctttgtttgagagtttggaaagaatgggaaagaacgattttggagggttaaaaatatagagaaaaatggtaaaatcttttatattttttaaacgagtaat 41495560  T
Q  208 tttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||| || ||||  ||| ||||||||||||||||||||||||||||||    
T  41495561 tttttaaagaatgatagattaatgtttatgattaatatatttttaat 41495607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 252
Target Start/End: Complemental strand, 47063898 - 47063796
Alignment:
Q  152 gggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    |||||| | |||||||| |||||| ||||||| ||| ||||||| |||||| | | ||| ||||||   ||||||| ||| |||||||||||||||||||    
T  47063898 gggacaaacatatagggaaaaattgagaaatcattcgcatttttcgaaagattgtgtttttagagagtgataaattgatgcttatgattaatatattttt 47063799  T
Q  250 aat 252  Q
    |||    
T  47063798 aat 47063796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 4441921 - 4441990
Alignment:
Q  186 tcacattttttgaaagagtatt-tttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||| |||||||||| ||| ||||||   ||||||||||| ||||||||||||||||||||||    
T  4441921 tcacattttttaaaagagtattatttttagagagtgataaattaatgcttatgattaatatatttttaat 4441990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 32648902 - 32648971
Alignment:
Q  185 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||| | |||| |||||||  ||||| ||||  ||||||||||||||||||||||    
T  32648902 ttcacattttttgaaagagcagttttttagagaatgataaactaatacttatgattaatatatttttaat 32648971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 252
Target Start/End: Original strand, 38136652 - 38136801
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 204  Q
    |||||||||||||||||||||| || | ||||||||| | ||||| ||||    ||||||  ||||||||  |||||||||||| |   ||| |||||||    
T  38136652 aggctttgtttgggagtttggaggggaagggaaggaaaggctttgaggggtgcaaaatatgagggaaaatagagaaatctttcaaaaaatttaaaagagt 38136751  T
Q  205 atttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    | |||| |||||||  |||||||||||  |||||||| | ||||||||||    
T  38136752 agttttttagagaatgataaattaatgcatatgattactttatttttaat 38136801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 27485154 - 27485230
Alignment:
Q  179 aaatctttcacattttttgaaagagtattt-ttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||||| |||||||| || || |||| ||  |||||| |||| ||||||||||||||||||||||    
T  27485154 aaatctttcacatttttttaaagagtaattattttagaaaatgataaatgaatgcttatgattaatatatttttaat 27485230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 38644677 - 38644636
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagagaa 218  Q
    |||||||||||||||||||||||||| ||||||| |||||||    
T  38644677 agaaatctttcacattttttgaaagactatttttttagagaa 38644636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 53013734 - 53013701
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||||||||||||||||||    
T  53013734 ataaattaatgtttatgattaatatatttttaat 53013701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 3075651 - 3075687
Alignment:
Q  174 ttcagaaatctttcacattttttgaaagagtattttt 210  Q
    |||||||||||||||||||||||||||| ||||||||    
T  3075651 ttcagaaatctttcacattttttgaaagcgtattttt 3075687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 39089814 - 39089739
Alignment:
Q  178 gaaatctttcacattttttgaaagagtatttttgtagagaa--ataaa-ttaatgtttatgattaatatattttta 250  Q
    ||||| ||||| | ||||||||||||||||||| |||||||  | ||| |||||| ||||||||||||||||||||    
T  39089814 gaaatttttcataatttttgaaagagtatttttttagagaatgacaaagttaatgcttatgattaatatattttta 39089739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 52430418 - 52430466
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatt 207  Q
    ||||||||||||||||| | ||||||||||||| |||||||| ||||||    
T  52430418 aaatataggggaaaattgaaaaatctttcacatcttttgaaatagtatt 52430466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 54206069 - 54205987
Alignment:
Q  168 ggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttt 248  Q
    |||||||  |||||| ||||| ||||||||||||||||| ||| |||||||  ||||| || ||| ||||||||||| |||||    
T  54206069 ggaaaatagagaaatgtttcatattttttgaaagagtatctttttagagaatgataaactactgtgtatgattaatacatttt 54205987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 252
Target Start/End: Complemental strand, 368256 - 368171
Alignment:
Q  170 aaaattcagaaatctttcacattttttgaaagagta-tttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||| |||||||||||| |  |||| |||||||| ||||| |||||||  |||||||||||  |||||||| ||||||||||||    
T  368256 aaaattgagaaatctttcaaaaattttaaaagagtagtttttttagagaatgataaattaatgcatatgattactatatttttaat 368171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 904380 - 904311
Alignment:
Q  185 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||||| || |||| |||||||  ||||| ||||  |||||||||||||| |||||||    
T  904380 ttcacattttttgaaagaatagttttttagagaatgataaactaatacttatgattaatatacttttaat 904311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 32579323 - 32579289
Alignment:
Q  218 aataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||| |||||||||||||||||    
T  32579323 aataaattaatgtttataattaatatatttttaat 32579289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 37662834 - 37662757
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||| || ||||||||||  |||||||||||| ||||||   ||||| ||||| ||||| ||||||||||||||||    
T  37662834 agaaattttccacatttttttgaagagtatttttttagagagtgataaaataatgcttatgtttaatatatttttaat 37662757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 40424316 - 40424382
Alignment:
Q  109 ctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaatt 175  Q
    |||||||||||||||| |||||  ||||||| || ||||||| ||  |||||||||| |||||||||    
T  40424316 ctttgtttgggagtttagaagggtggggaagaaaggactttgtggatcataaatatatgggaaaatt 40424382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 41844618 - 41844549
Alignment:
Q  185 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||  | |||| |||||||  ||||||||||  |||||||||||||| |||||||    
T  41844618 ttcacattttttgaaagaacaattttttagagaatgataaattaatacttatgattaatatacttttaat 41844549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 516202 - 516169
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||| |||||||||||||||||    
T  516202 ataaattaatgtttataattaatatatttttaat 516169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 27143325 - 27143292
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||| ||||||||||||||||||||||    
T  27143325 ataaattaatgcttatgattaatatatttttaat 27143292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 31428978 - 31428915
Alignment:
Q  190 attttttgaaagagtatttttgtagagaaa--taaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||| |||| ||||||||  |||||||| ||||||| ||||||||||| ||||    
T  31428978 attttttgaaagagtaatttt-tagagaaagataaattaacgtttatggttaatatatttataat 31428915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 47047450 - 47047417
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||||||| |||||||||||||    
T  47047450 ataaattaatgtttatgattgatatatttttaat 47047417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 34236429 - 34236469
Alignment:
Q  179 aaatctttcacattttttgaaagagt-atttttgtagagaa 218  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  34236429 aaatctttcacattttttgaaagagtgatttttttagagaa 34236469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 35959430 - 35959382
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttggggg 154  Q
    |||||||||||||||||||||| || ||||| ||||| | |||||||||    
T  35959430 aggctttgtttgggagtttggaggggaggggtaggaaaggctttggggg 35959382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 41364025 - 41363985
Alignment:
Q  102 acttaggctttgtttgggagtttggaaggaaggggaaggaa 142  Q
    |||||||||||||||||||||||||| || |||||| ||||    
T  41364025 acttaggctttgtttgggagtttggaggggaggggagggaa 41363985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 54240624 - 54240656
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaa 251  Q
    |||||||||||||||| ||||||||||||||||    
T  54240624 ataaattaatgtttataattaatatatttttaa 54240656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 7e-30; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 105 - 252
Target Start/End: Original strand, 22556522 - 22556671
Alignment:
Q  105 taggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 204  Q
    |||||||||||||  |||||||| || ||| ||||||| | || | ||||| | |||||||||| |||||| |||||||||||||||||||| |||||||    
T  22556522 taggctttgtttgtaagtttggaggggaggagaaggaaaggctctcggggatagaaatatagggaaaaattgagaaatctttcacattttttaaaagagt 22556621  T
Q  205 atttttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    |||||| ||||||   ||||| ||||| ||||||||||||||||||||||    
T  22556622 atttttttagagagtgataaactaatgcttatgattaatatatttttaat 22556671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 33187710 - 33187814
Alignment:
Q  150 gggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtaga--gaaataaattaatgtttatgattaatatattt 247  Q
    |||||||| ||||||||||||||||| | |||| |||||||| |||||||||||||||||  ||||  |  ||||||||||| |||||||||||||||||    
T  33187710 gggggacaaaaatataggggaaaattgaaaaatatttcacatcttttgaaagagtattttcttagagggtgataaattaatgcttatgattaatatattt 33187809  T
Q  248 ttaat 252  Q
    |||||    
T  33187810 ttaat 33187814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 252
Target Start/End: Original strand, 4787875 - 4787970
Alignment:
Q  160 aatataggggaaaattcagaaatctttcacattttttgaaagagt-atttttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||| |||||| |||||| ||||||||||||||||||||| |||||| ||||||   ||||||||||| ||||||||||||||||||||||    
T  4787875 aatatagggaaaaattgagaaatttttcacattttttgaaagagtaatttttttagagagtgataaattaatgcttatgattaatatatttttaat 4787970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 38138140 - 38138045
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||   || ||||||||||||||||||| ||||||||||| |||||||  ||||||||||| |||||||||||| |||||||||    
T  38138140 aaatataggggaaaagagagtaatctttcacattttttgatagagtatttttttagagaatgataaattaatgcttatgattaatacatttttaat 38138045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 106 - 252
Target Start/End: Original strand, 6746400 - 6746546
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttggggga-cataaatataggggaaaattcagaaatctttcacattttttgaaagagt 204  Q
    |||||||||||||||||||| |||| ||||||| | | |  ||||||||  |  |||||| |||||||||  |||||||||||| || |||||||||| |    
T  6746400 aggctttgtttgggagtttg-aagggaggggaatggagggttttggggggtcgaaaatatgggggaaaatggagaaatctttcaaatattttgaaagatt 6746498  T
Q  205 atttttgtagagaaataaattaatgtttatgattaatatatttttaat 252  Q
    | |||| ||||  |||||||||||||||||||||| ||||||||||||    
T  6746499 agttttttagactaataaattaatgtttatgattactatatttttaat 6746546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 252
Target Start/End: Original strand, 23465818 - 23465967
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 204  Q
    |||||||||||||||||||||| || ||||||||| | |||||||  |||    ||||||||||||||||    |||||||||||||||||| ||||| |    
T  23465818 aggctttgtttgggagtttggaggggaggggaagggaagactttgaagggttggaaatataggggaaaatggtaaaatctttcacattttttaaaagaat 23465917  T
Q  205 atttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    | |||| |||||||  ||||||||||  ||||||||||||||| ||||||    
T  23465918 agttttttagagaatgataaattaattcttatgattaatatatatttaat 23465967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 252
Target Start/End: Complemental strand, 31055560 - 31055466
Alignment:
Q  161 atataggggaaaattcagaaatctttcacattttt-tgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||| ||||||||| ||||||||||||||||||| | ||||||| ||||| ||||||   ||||||||||| ||||||||||||||||||||||    
T  31055560 atataagggaaaattgagaaatctttcacatttttataaaagagtgtttttttagagagtgataaattaatgcttatgattaatatatttttaat 31055466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 252
Target Start/End: Original strand, 42112774 - 42112926
Alignment:
Q  104 ttaggctttgtttgggagtttggaaggaaggggaaggaatgacttt-gggggacataaatataggggaaaattcagaaatctttcacattt-tttgaaag 201  Q
    |||||||||||||||||||||||| || ||||||||||| |  ||| |||||    || ||||| |  ||||  ||||||||||||||||| ||||||||    
T  42112774 ttaggctttgtttgggagtttggaggggaggggaaggaagggttttagggggtgggaagtatagagagaaatggagaaatctttcacatttctttgaaag 42112873  T
Q  202 agtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||| ||||| |||||||  ||||| ||||| |||||||| |||||||||||||    
T  42112874 agtgtttttttagagaatgataaactaatgcttatgattcatatatttttaat 42112926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 374432 - 374503
Alignment:
Q  183 ctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||| ||||||||||||| |||| ||  |||| |||||||||||||||||||||||||||||    
T  374432 ctttcacattttttaaaagagtatttttttagataataataatttaatgtttatgattaatatatttttaat 374503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 14676439 - 14676348
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttt 248  Q
    ||||||||||||||||    ||||||||||||||||||||||||||| |||| ||| |||  ||||||||||| ||||| ||||||||||||    
T  14676439 aaatataggggaaaatggtcaaatctttcacattttttgaaagagtaattttttagggaatgataaattaatgcttatggttaatatatttt 14676348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 251
Target Start/End: Original strand, 44487202 - 44487301
Alignment:
Q  154 gacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaa 251  Q
    |||| ||| ||||| ||||||| | |||||||||||||||||| | ||||||||||| ||||||   ||||||||||| ||||| |||||||||||||||    
T  44487202 gacaaaaaaataggtgaaaattgataaatctttcacatttttttatagagtatttttttagagagtgataaattaatgcttatggttaatatatttttaa 44487301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 45510526 - 45510460
Alignment:
Q  184 tttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttt 248  Q
    ||||||||||| |||||||||| |||| |||||||  ||||||||||||||||||||||||||||||    
T  45510526 tttcacattttgtgaaagagtaattttttagagaatgataaattaatgtttatgattaatatatttt 45510460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 252
Target Start/End: Original strand, 38505162 - 38505311
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 204  Q
    |||||||||||||||||||||| || ||||||||| | | ||||| ||||    |||| |  ||||||||  |||||||||||| ||||||| |||||||    
T  38505162 aggctttgtttgggagtttggaggggaggggaagggaaggctttgaggggtggaaaatttgagggaaaatggagaaatctttcaaattttttaaaagagt 38505261  T
Q  205 atttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    | |||| |||||||  |||||||||||   ||||||| ||||||||||||    
T  38505262 agttttttagagaatgataaattaatgcagatgattactatatttttaat 38505311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 252
Target Start/End: Complemental strand, 36907544 - 36907397
Alignment:
Q  108 gctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtat 206  Q
    ||||||||||||| |||||| || ||||||| ||| |||||||| |||    ||||||||| |||||     |||||||||||||||||| ||| | ||     
T  36907544 gctttgtttgggaatttggaggggaggggaatgaaagactttggagggttgaaaatataggagaaaaaggtaaaatctttcacattttttaaaatactaa 36907445  T
Q  207 ttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||| |||| ||  ||||||||||||||||||||| ||||||||||||    
T  36907444 ttttttagataatgataaattaatgtttatgattactatatttttaat 36907397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 210
Target Start/End: Complemental strand, 41471709 - 41471601
Alignment:
Q  103 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacat-aaatataggggaaaattcagaaatctttcacattttttgaaag 201  Q
    |||||||| |||||||||||||||| ||||||||||   | | |||||||||     ||||||||||| ||||  ||| |||||||||||||||||||||    
T  41471709 cttaggctctgtttgggagtttggagggaaggggaattgagggctttggggggtgggaaatatagggggaaatggagagatctttcacattttttgaaag 41471610  T
Q  202 agtattttt 210  Q
    |||||||||    
T  41471609 agtattttt 41471601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 40985271 - 40985330
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa 218  Q
    |||||||||  |||||  |||||| |||||||||||||||||||||||||||||||||||    
T  40985271 aaatataggaaaaaatagagaaatatttcacattttttgaaagagtatttttgtagagaa 40985330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 24923297 - 24923361
Alignment:
Q  190 attttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||  |||| |||||||  ||||||||||| ||||||||||||||||||||||    
T  24923297 attttttgaaagagtggttttttagagaatgataaattaatgattatgattaatatatttttaat 24923361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 251
Target Start/End: Original strand, 46611757 - 46611849
Alignment:
Q  161 atataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaa 251  Q
    ||||||||| ||||| | ||||||||||||||||||||||||  |||||| ||||||   ||||| ||||  ||||||||||| |||||||||    
T  46611757 atatagggggaaattgataaatctttcacattttttgaaagataatttttttagagagtgataaactaatacttatgattaatgtatttttaa 46611849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 252
Target Start/End: Complemental strand, 21687693 - 21687547
Alignment:
Q  110 tttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtattt 208  Q
    |||||||||||||| | |  | ||||||||||| |  ||||| |||| | |||||||||| |||||| | |||||||| |||| |||| |||||||||||    
T  21687693 tttgtttgggagttagaagaggaggggaaggaaaggttttggagggatagaaatatagggaaaaattgaaaaatcttttacatcttttaaaagagtattt 21687594  T
Q  209 ttgt---agagaaataaattaatgtttatgattaatatatttttaat 252  Q
    || |   ||||  ||||||||||| ||||  ||||||||||||||||    
T  21687593 ttattaaagagtgataaattaatgattatatttaatatatttttaat 21687547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 41714110 - 41714173
Alignment:
Q  188 acattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    ||||||||| |||||||||||||||||||||   |||||||||||| ||| |||||||||||||    
T  41714110 acattttttaaaagagtatttttgtagagaatgttaaattaatgttaatggttaatatattttt 41714173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 43230164 - 43230089
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||| ||||||||||| ||||||||| |||  ||  |||||||||| || ||||||||||||||||||||    
T  43230164 aaatctttcatattttttgaaatagtatttttttagtaaatgataaattaatattaatgattaatatatttttaat 43230089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 23552386 - 23552335
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtattttt 210  Q
    |||||||| | |||||| |||||| |||||||||||||||||||||||||||    
T  23552386 aaatatagagaaaaattgagaaatttttcacattttttgaaagagtattttt 23552335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 31770306 - 31770253
Alignment:
Q  201 gagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||  |||||| |||||||||||||||||||||| ||||    
T  31770306 gagtatttttgtagagaatgataaataaatgtttatgattaatatatttgtaat 31770253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 208
Target Start/End: Complemental strand, 32229031 - 32228928
Alignment:
Q  109 ctttgtttgggagtttggaaggaaggggaaggaatgactttggggg----acataaatataggggaaaattcagaaatctttcacattttttgaaagagt 204  Q
    |||||||||| |||||||| ||||| |||| ||| |||||||| ||    | | ||||||||   |||| | ||||||||||||||||||||||||||||    
T  32229031 ctttgtttggaagtttggagggaagaggaatgaaggactttggagggaaaaaaaaaatatagaaaaaaaatgagaaatctttcacattttttgaaagagt 32228932  T
Q  205 attt 208  Q
    ||||    
T  32228931 attt 32228928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 38987540 - 38987507
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||||||||||||||||||    
T  38987540 ataaattaatgtttatgattaatatatttttaat 38987507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 35489904 - 35489956
Alignment:
Q  199 aagagtatttttgtagagaaa-taaattaatgtttatgattaatatattttta 250  Q
    ||||||||||||||||| ||| ||||| |||||||| ||||||||||||||||    
T  35489904 aagagtatttttgtagataaaataaatgaatgtttaagattaatatattttta 35489956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 43348111 - 43348206
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||| || |||||  || |||||||||  |||||| |||||||| |||| |||||||  |||||||||||  |||||||| ||||||||||||    
T  43348111 aaatataaggaaaaatagagtaatctttcaatttttttaaaagagtagttttttagagaacaataaattaatgcatatgattattatatttttaat 43348206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 45066931 - 45066837
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||| |||||||  |||||||||||| ||||| | |||||| |||| | || ||||  |||||||||| ||||||||||| |||||||||||    
T  45066931 aaatatagcggaaaatgaagaaatctttcaaattttgttaaagagcatttct-taaagaatgataaattaatatttatgattaacatatttttaat 45066837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 30081594 - 30081531
Alignment:
Q  147 tttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtattttt 210  Q
    ||||||||||| |||||||||||||||||  ||||  |||||||| |||| ||||||| |||||    
T  30081594 tttgggggacaaaaatataggggaaaattttgaaaattttcacatattttaaaagagttttttt 30081531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 210
Target Start/End: Complemental strand, 35682854 - 35682744
Alignment:
Q  102 acttaggctttgtttgggagtttggaaggaaggggaaggaatgactttggggg--acataaatataggggaaaattcagaaatctttcacattttttgaa 199  Q
    ||||| ||||||||||||||||| || || ||| ||||||| | | |||||||  | ||||||||| | |||| || | |||||||||| ||||||||||    
T  35682854 acttaagctttgtttgggagtttagaggggaggagaaggaagggcattgggggggagataaatatatgagaaatttgataaatctttcatattttttgaa 35682755  T
Q  200 agagtattttt 210  Q
    || || |||||    
T  35682754 agtgttttttt 35682744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 38991363 - 38991437
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    |||||||||| | ||||||| ||||||| | ||| |||||||  ||||||||| |||||| ||||||||||||||    
T  38991363 agaaatcttttatattttttcaaagagtgtatttttagagaatgataaattaaagtttataattaatatattttt 38991437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 46509448 - 46509382
Alignment:
Q  185 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    |||||||||||| | |||||| | || |||||||  ||||||||||||||||| |||||||||||||    
T  46509448 ttcacatttttttagagagtaatgttttagagaatgataaattaatgtttatggttaatatattttt 46509382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 248
Target Start/End: Original strand, 48775922 - 48776063
Alignment:
Q  102 acttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaag 201  Q
    |||||||||||||||| ||||||||| || |||||||| || |       |||| | || |||| | ||||||| | |||||||| | ||||| | ||||    
T  48775922 acttaggctttgtttgagagtttggaggggaggggaagaaaag-------gggagagaagtataagagaaaattgataaatcttttatattttcttaaag 48776014  T
Q  202 agtatttttgtagagaa--ataaattaatgtttatgattaatatatttt 248  Q
    ||||||||| ||||||   ||||||||||  ||||||||||||||||||    
T  48776015 agtatttttttagagagtgataaattaattcttatgattaatatatttt 48776063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 1278140 - 1278094
Alignment:
Q  150 gggggacataaatataggggaaaattcagaaatctttcacatttttt 196  Q
    |||||||| ||||||||||| ||||| |||||||||||| |||||||    
T  1278140 gggggacaaaaatatagggggaaattgagaaatctttcaaatttttt 1278094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 17818477 - 17818400
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||| ||||| | ||||| || |||| |||||||  |||||||||||| ||| |||| ||||||||||||    
T  17818477 agaaatctttcaaattttctaaaagaatagttttttagagaatgataaattaatgtatataattactatatttttaat 17818400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 28437440 - 28437509
Alignment:
Q  185 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||  | |||| |||||||  ||||| |||| ||||||||||||||| |||||||    
T  28437440 ttcacattttttgaaagaacaattttttagagaatgataaactaatatttatgattaatatacttttaat 28437509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 249
Target Start/End: Complemental strand, 30081170 - 30081089
Alignment:
Q  170 aaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    |||||| ||||||||||||  |||||| |||||||| |||| |||||||   |||||||||||||| ||||| || ||||||    
T  30081170 aaaattgagaaatctttcaatttttttaaaagagtagttttttagagaatggtaaattaatgtttaagattactacattttt 30081089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 33810110 - 33810179
Alignment:
Q  185 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||| ||||||||||||| || |||| |||||||  ||||| |||| ||||||||||||||| |||||||    
T  33810110 ttcatattttttgaaagaataattttttagagaatgataaactaatatttatgattaatatacttttaat 33810179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 42593060 - 42593094
Alignment:
Q  218 aataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||| ||||||||||||||||||    
T  42593060 aataaattaatgtttacgattaatatatttttaat 42593094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 425728 - 425634
Alignment:
Q  162 tataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa----ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||  ||||| |||| | |||| |||||||||||| ||||||||| |  ||||    |||||||| ||||||| |||||||||||||||||    
T  425728 tatagggataaattgagaattttttctcattttttgaaatagtatttttttttagaaattgataaattattgtttattattaatatatttttaat 425634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 38679864 - 38679913
Alignment:
Q  161 atataggggaaaattcagaaatctttcacattttttgaaagagtattttt 210  Q
    |||||||| ||| || | ||||||||||||||||||||||| ||||||||    
T  38679864 atatagggaaaatttgataaatctttcacattttttgaaagtgtattttt 38679913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 23128187 - 23128123
Alignment:
Q  135 ggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttga 198  Q
    ||||| ||||| ||||| |||||| ||||||| | ||||||| | ||||||||||||||||||||    
T  23128187 ggaagaaatgattttggagggacaaaaatatacgtgaaaattgaaaaatctttcacattttttga 23128123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 32650283 - 32650358
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||| || | |||||||||||||| |||| |||||||  |||||||||||  |||||||| | ||||||||||    
T  32650283 aaatcttacaaaatttttgaaagagtagttttttagagaatgataaattaatgcatatgattattttatttttaat 32650358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 36845333 - 36845408
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||| |||||||||||||||||||| |  ||| |||||||   |||||||||  ||||||||| ||||||||||||    
T  36845333 aaatatttcacattttttgaaagagaaactttttagagaatgttaaattaatacttatgattactatatttttaat 36845408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 42266899 - 42266974
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||| ||| ||||||||||||| | || |||| |||||||  ||||||||||| ||||| ||| ||||||||||||    
T  42266899 aaatttttaacattttttgaaaaaataattttttagagaatgataaattaatgcttatgtttactatatttttaat 42266974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 103 - 252
Target Start/End: Original strand, 1839635 - 1839787
Alignment:
Q  103 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttgaaag 201  Q
    ||||||||||||||| ||||||||| || | ||||||||| | ||||||||| ||| || ||||| |||||||| |||||||||||||||||||||||||    
T  1839635 cttaggctttgtttgcgagtttggaggggaagggaaggaaaggctttggggggacaaaattatagaggaaaattgagaaatctttcacattttttgaaag 1839734  T
Q  202 agtatttttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||| ||||||   ||||||||||   ||| |||||||||| ||||||    
T  1839735 agtatttttttagagagtgataaattaatacatatcattaatatatgtttaat 1839787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 251
Target Start/End: Original strand, 9054337 - 9054477
Alignment:
Q  114 tttgggagtttggaaggaaggggaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgt 212  Q
    |||||||||||||| || ||||||| ||| || |||||||| | | |||||||| |||||||| |||||||||||||||||||||||||| ||||||| |    
T  9054337 tttgggagtttggatgggaggggaatgaaagaatttggggggagaaaaatatagaggaaaattgagaaatctttcacattttttgaaagaatattttttt 9054436  T
Q  213 ag--agaaataaattaatgtttatgattaatatatttttaa 251  Q
    ||  ||  |||| ||| || |||||||||||||||||||||    
T  9054437 agatagtgataagttagtgcttatgattaatatatttttaa 9054477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 252
Target Start/End: Original strand, 10878599 - 10878749
Alignment:
Q  102 acttaggctttgtttgggagtttggaaggaaggggaaggaatga-ctttggg-ggacataaatataggggaaaattcagaaatctttcacattttttgaa 199  Q
    |||||||||||||||| |||||||||  | |||||| |||| || ||||||| ||||| ||||||| ||||||||| |||||||||| || |||||||||    
T  10878599 acttaggctttgtttgagagtttggagaggagggga-ggaaagagctttgggaggacaaaaatataagggaaaattgagaaatctttaactttttttgaa 10878697  T
Q  200 agagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||| ||||||   |||||||||   ||||||||||||||||||||||    
T  10878698 agagtatttttttagagagtgataaattaa---ttatgattaatatatttttaat 10878749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 32158974 - 32158879
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||| |||||||| |||||||||||||||||||  ||||||||||||| ||||||  |||||||||||| ||||| ||||||||||||||||    
T  32158974 aaatatagaggaaaattgagaaatctttcacatttttgtaaagagtatttttttagagagtaataaattaatgattatggttaatatatttttaat 32158879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 252
Target Start/End: Complemental strand, 8948882 - 8948739
Alignment:
Q  110 tttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttt 209  Q
    |||||||| ||||||||| ||| ||| |||||||||||||| || | | |||||| |||||||||| ||||||||||||||| ||||||| |||||||||    
T  8948882 tttgtttgagagtttggatgga-gggcaaggaatgactttgagg-atagaaatatcggggaaaattaagaaatctttcacatattttgaaggagtatttt 8948785  T
Q  210 tgt---agagaaataaattaatgtttatgattaatatatttttaat 252  Q
    | |   ||||  || |||||||||||||||||||||| ||||||||    
T  8948784 ttttagagagtgatcaattaatgtttatgattaatatgtttttaat 8948739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 13258676 - 13258600
Alignment:
Q  178 gaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||||||||||||||||| |||||||  ||||||||||| ||| ||||||||||||||||||    
T  13258676 gaaatctttcacattttttgaaagagtatttttttagagaatgataaattaatgcttacgattaatatatttttaat 13258600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 27085550 - 27085462
Alignment:
Q  167 gggaaaattcagaaatctttcacattttttgaaagagtatttttgt---agagaaataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| |   ||||  ||||||||||| ||||||||||||||||||||||    
T  27085550 gggaaaattgagaaatctttcacatttgttgaaagagtattttttttagagagtgataaattaatgcttatgattaatatatttttaat 27085462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 35376511 - 35376601
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttt 248  Q
    ||||||||||||||||  || ||||||| |||||||||| |||||||||||| ||||||  |||||||||||| ||||||||||||||||||    
T  35376511 aaatataggggaaaatggaggaatctttaacattttttggaagagtattttt-tagagaacaataaattaatgcttatgattaatatatttt 35376601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 252
Target Start/End: Complemental strand, 29584437 - 29584288
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 204  Q
    |||||||||||| ||||||||| |||||||||||||| | ||||| ||||    |||||   ||||||||  |||||||||||| ||||||| |||| ||    
T  29584437 aggctttgtttgcgagtttggagggaaggggaaggaaaggctttgaggggtggaaaatacgagggaaaatgaagaaatctttcaaattttttaaaagtgt 29584338  T
Q  205 atttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    | |||| |||||||  |||||||||||  |||||||| ||||||||||||    
T  29584337 agttttttagagaatgataaattaatgcatatgattactatatttttaat 29584288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 3394150 - 3394078
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    ||||||| ||||||||||||||||||| ||||  ||||||  |||||||||||||||||||||||||||||||    
T  3394150 aaatcttgcacattttttgaaagagtaatttttaagagaatgataaattaatgtttatgattaatatattttt 3394078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 37388468 - 37388396
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    |||||||||||||||||||||||||||  ||| |||||||  ||||||||| |||||||||||||||||||||    
T  37388468 aaatctttcacattttttgaaagagtaaatttttagagaatgataaattaaagtttatgattaatatattttt 37388396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 39194123 - 39194045
Alignment:
Q  177 agaaatctttcaca-ttttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||| |||||||||||||| ||||| |||||||  ||||| |||||||||||||| |||||||||||||    
T  39194123 agaaatctttcacacttttttgaaagagtgtttttttagagaatgataaactaatgtttatgattcatatatttttaat 39194045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 42589730 - 42589823
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagta-tttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    |||||||||  |||||  ||||||||||||||||||| | ||||||| ||||| |||||||  ||||||||||| |||||||||||||||||||    
T  42589730 aaatataggaaaaaatggagaaatctttcacatttttcggaagagtattttttttagagaagtataaattaatgcttatgattaatatattttt 42589823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 40984968 - 40985041
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||| ||||||||||||  || |||| |||||||  ||||||||||||||||||||||||||||||||||    
T  40984968 aaatctttcatattttttgaaag--taattttttagagaatgataaattaatgtttatgattaatatatttttaat 40985041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 248
Target Start/End: Complemental strand, 10590062 - 10589922
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagta 205  Q
    ||||||||||||||||||| || |||||||||| ||| |  | |||| |     |||||||||||||||| |||||| ||| | ||||||| ||||||||    
T  10590062 aggctttgtttgggagtttagagggaaggggaatgaaaggttctgggagg----aatataggggaaaattgagaaatttttaatattttttaaaagagta 10589967  T
Q  206 tttttgtagaga--aataaattaatgtttatgattaatatatttt 248  Q
    ||||| ||||||   |||||| |||| ||||| ||||||||||||    
T  10589966 tttttttagagagttataaataaatgcttatgcttaatatatttt 10589922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 13537519 - 13537456
Alignment:
Q  191 ttttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||| |||| |||||||  ||||||||||| ||||||||||||||||||||||    
T  13537519 ttttttgaaagagtaattttttagagaataataaattaatgcttatgattaatatatttttaat 13537456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 13627067 - 13627004
Alignment:
Q  191 ttttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||| |||| |||||||  ||||||||||| ||||||||||||||||||||||    
T  13627067 ttttttgaaagagtaattttttagagaataataaattaatgcttatgattaatatatttttaat 13627004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 252
Target Start/End: Complemental strand, 31150167 - 31150016
Alignment:
Q  103 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaaga 202  Q
    |||||| ||| |||||||||||||||   ||| ||| ||| ||||||||| |    |||||| | |||||||   ||||| ||||||||||||| || ||    
T  31150167 cttaggatttatttgggagtttggaaatgaggagaatgaaagactttgggtgtgggaaatattgaggaaaatggtgaaatatttcacatttttttaagga 31150068  T
Q  203 gtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    || |||||||||||||  ||||| | |||||||||||| |||||||||||||    
T  31150067 gtgtttttgtagagaatgataaactgatgtttatgattcatatatttttaat 31150016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 28416043 - 28416118
Alignment:
Q  153 ggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaaataaattaat 228  Q
    ||||| |||||||| |||||| | | |||||||||||||||||||||||||||||| | |||||  ||||||||||    
T  28416043 ggacaaaaatatagaggaaaaatgaaaaatctttcacattttttgaaagagtatttgtttagagtgataaattaat 28416118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 16424329 - 16424252
Alignment:
Q  177 agaaatctttcacattttttgaaagagta--tttttgtagagaaataaattaatgtttatgattaatatatttttaat 252  Q
    |||||| ||||||||||||||||||||||  |||||  |||| ||||||||| || |||| |||||||||||||||||    
T  16424329 agaaatttttcacattttttgaaagagtatctttttaaagagcaataaattactgcttataattaatatatttttaat 16424252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 23963272 - 23963167
Alignment:
Q  107 ggctttgtttgggagtttggaaggaaggg----gaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttgaaag 201  Q
    |||||||||||| |||||||| ||| |||    ||||||| ||||||||||| ||  |||||||| |||||||| |||||||||| |||||||| |||||    
T  23963272 ggctttgtttggtagtttggagggaggggatgggaaggaaagactttggggggaccgaaatatagaggaaaattgagaaatcttttacattttt-gaaag 23963174  T
Q  202 agtattt 208  Q
    |||||||    
T  23963173 agtattt 23963167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 5158927 - 5159002
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttta 250  Q
    ||||||||||||| |||| | ||||||| ||||||| |||||  ||||||||||| ||||||| ||||||||||||    
T  5158927 agaaatctttcactttttgttaaagagtgtttttgtggagaatgataaattaatgcttatgatcaatatattttta 5159002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 31305639 - 31305699
Alignment:
Q  150 gggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtattttt 210  Q
    |||||||| ||||||||||||||||| | ||||| |||||||||||||||| ||| |||||    
T  31305639 gggggacaaaaatataggggaaaattgaaaaatccttcacattttttgaaatagttttttt 31305699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 35616749 - 35616674
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||| | |||||||| |||||| |||| ||||||   ||||||||||||||| ||||||||||||||||||    
T  35616749 aaatctttctctttttttgagagagtaattttttagagattgataaattaatgtttaagattaatatatttttaat 35616674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 35856422 - 35856497
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||| | | ||||||||||||||||||| |||||||  |||| ||||| |||||||| ||||||||||||||    
T  35856422 aaatcttttaaaatttttgaaagagtatttttttagagaatgataagttaatatttatgatgaatatatttttaat 35856497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 11742709 - 11742635
Alignment:
Q  180 aatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||||| | || |||| |||||||  ||||||||||| |||| |||| ||||||||||||    
T  11742709 aatctttcacattttttgaaaaattagttttttagagaatgataaattaatggttatcattattatatttttaat 11742635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 39418242 - 39418172
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatat 245  Q
    ||||||||| ||||||| ||||||| || ||||||||| |||  |||||| ||||||||||||||||||||    
T  39418242 agaaatcttccacatttattgaaagggtgtttttgtagggaatgataaatgaatgtttatgattaatatat 39418172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 32365 - 32267
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga---aataa--attaatgtttatgattaatatatttttaat 252  Q
    |||||| ||| |||||  ||||||||||||||||||||||||||||| ||||  |||||   | |||  | |||| |||||||||||||||||||||||    
T  32365 aaatatggggaaaaatagagaaatctttcacattttttgaaagagtagtttttaagagagtgactaattaataatatttatgattaatatatttttaat 32267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 5941253 - 5941181
Alignment:
Q  179 aaatctttcacattttttgaaagagta-tttttgtagagaa--ataaattaatgtttatgattaatatatttt 248  Q
    ||||||||||||||||||||||||||| ||||| | ||| |  ||||||||||| |||| |||||||||||||    
T  5941253 aaatctttcacattttttgaaagagtaattttttttgagtatgataaattaatgcttataattaatatatttt 5941181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 13406835 - 13406754
Alignment:
Q  108 gctttgtttgggagtttggaaggaaggggaaggaatgactttgggg-gacataaatataggggaaaattcagaaatctttca 188  Q
    |||||||||||||||||||| |  ||| ||||||| | |||||||| |||| |||||||||||||  || ||||||||||||    
T  13406835 gctttgtttgggagtttggaggagaggagaaggaagggctttggggagacaaaaatataggggaattttgagaaatctttca 13406754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 218
Target Start/End: Original strand, 11226218 - 11226333
Alignment:
Q  104 ttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcaca-ttttttgaaaga 202  Q
    |||||||||||||||||||||||| ||  |||||||  | ||||| |||||  | |||||||| |||||||  |||||  ||||| | ||||||||| ||    
T  11226218 ttaggctttgtttgggagtttggaggggtggggaagcgaggacttcgggggtaagaaatatagaggaaaatgaagaaaattttcatatttttttgaagga 11226317  T
Q  203 gtatttttgtagagaa 218  Q
    |||||| | |||||||    
T  11226318 gtatttgtttagagaa 11226333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 252
Target Start/End: Original strand, 13369799 - 13369887
Alignment:
Q  169 gaaaattcagaaatctttcacattttttgaaagagta---tttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||| |||||||||||| ||||||| ||||||||   ||||| |||||||  |||||||||||  || ||||| ||||||||||||    
T  13369799 gaaaattgagaaatctttcaaattttttaaaagagtaatttttttttagagaatgataaattaatgcatacgattactatatttttaat 13369887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 32503010 - 32502947
Alignment:
Q  190 attttttgaaagagtatttttgtagagaaata-aattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||| |||| ||||||||||||  | ||| ||||||||| |||||||||||||||||    
T  32503010 attttttgaaatagtaattttgtagagaatgataataaatgtttattattaatatatttttaat 32502947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 6038155 - 6038098
Alignment:
Q  194 tttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    ||||||||| ||| |||||||||||  ||||||||||| ||||||| |||||||||||    
T  6038155 tttgaaagattatatttgtagagaataataaattaatggttatgatcaatatattttt 6038098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 26042438 - 26042347
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaaataaattaatgtttatgattaatatatttttaat 252  Q
    ||||| ||||||||||| |||||||| | ||||| |||||  |||||||||| || ||  ||||||||||  || | |||||||||||||||||    
T  26042438 aaatacaggggaaaattgagaaatctcttacattctttga--gagtatttttttaaagtgataaattaatacttgtaattaatatatttttaat 26042347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 1840027 - 1840076
Alignment:
Q  103 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttggg 152  Q
    |||||||||||||||||||||||||||| |  |||||||| | |||||||    
T  1840027 cttaggctttgtttgggagtttggaagggacaggaaggaagggctttggg 1840076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 7079928 - 7079961
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||| ||||||||||||||||||||||    
T  7079928 ataaattaatgcttatgattaatatatttttaat 7079961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 35353974 - 35353941
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||| |||||||||||||||||||||||    
T  35353974 ataaattaatatttatgattaatatatttttaat 35353941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 38404550 - 38404458
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaaa--taaattaatgtttatgattaatatattttt 249  Q
    |||||||| |||||||  |||||||| ||| | ||||| ||||| ||| ||| |||| ||   ||||||||| ||||||||||||||||||||    
T  38404550 aaatatagaggaaaatggagaaatctctcataattttttaaagaatatatttttagaaaatggtaaattaatatttatgattaatatattttt 38404458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 252
Target Start/End: Original strand, 41540372 - 41540467
Alignment:
Q  158 taaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||  |||||||| | |||||||| ||||||||| ||| | | ||||| ||||||  |||||||||||  | ||||||||||||||||||||    
T  41540372 taaatatataggaaaattgaaaaatcttttacatttttttaaatatttttttt-tagagagtaataaattaatactcatgattaatatatttttaat 41540467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 4266656 - 4266713
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa 218  Q
    ||||||||  ||||||| ||||||||||||| |||||||||  ||||||||| |||||||    
T  4266656 aaatatagatgaaaattgagaaatctttcactttttttgaa--agtatttttttagagaa 4266713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 5935414 - 5935330
Alignment:
Q  116 tgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaa 200  Q
    ||||||||||||  | ||||||| |||   ||||| |||| | ||||||| || |||||| | ||||||||||||||||||||||    
T  5935414 tgggagtttggagaggaggggaaagaaaagctttgagggagagaaatatatggaaaaattgataaatctttcacattttttgaaa 5935330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 15108156 - 15108223
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatata 244  Q
    |||||||||| ||||||||||||| || |||| |||||||  |||||||||   ||||||||||||||    
T  15108156 aaatctttcatattttttgaaagaataattttttagagaatgataaattaacacttatgattaatata 15108223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 252
Target Start/End: Original strand, 1934925 - 1935074
Alignment:
Q  106 aggctttgtttgggagtttggaaggaagggg-aaggaatgactttggg-ggacataaatatagggga-aaattcagaaatctttcacattttttgaaaga 202  Q
    ||||| ||||||||||||| || || ||||| |||||| | ||||||| ||||| |||||||||||  ||||| |||||||||||||||||||| |||||    
T  1934925 aggctgtgtttgggagtttcgaggggagggggaaggaagggctttgggaggacaaaaatataggggggaaattgagaaatctttcacattttttaaaaga 1935024  T
Q  203 gtatttttgtagagaaataaattaatgtttatgattaatatatttttaat 252  Q
     ||||||| |||||  ||||||||||| ||||||||||||||||||||||    
T  1935025 ctatttttttagagtgataaattaatgcttatgattaatatatttttaat 1935074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 105 - 252
Target Start/End: Original strand, 3936397 - 3936547
Alignment:
Q  105 taggctttgtttgggagtttggaaggaaggggaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttgaaagag 203  Q
    ||||||||||||| ||||||| |||| ||||||||||| ||||||||||| | | |||| |||||||||||| |||||||||||| | ||||||||||||    
T  3936397 taggctttgtttgcgagtttgaaagggaggggaaggaaagactttggggggagagaaatgtaggggaaaattaagaaatctttcataatttttgaaagag 3936496  T
Q  204 tatttttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||  ||||||   | ||||||||||||||  ||||||||||| ||||    
T  3936497 tattttcttagagagtgaaaaattaatgtttatatttaatatatttctaat 3936547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 240
Target Start/End: Complemental strand, 15917659 - 15917518
Alignment:
Q  102 acttaggctttgtttgggagtttggaaggaaggggaaggaatgacttt-gggggacataaatataggggaaaattcagaaatctttcacattttttgaaa 200  Q
    |||||| ||||||||||||||||||| || ||| ||||||| ||| |  |||||||| |||||||  ||||| || |||||||||||| |||||||||||    
T  15917659 acttagactttgtttgggagtttggatgggaggagaaggaaagacctcagggggacaaaaatataaaggaaatttgagaaatctttcatattttttgaaa 15917560  T
Q  201 gagtatttttgtagaga--aataaattaatgtttatgattaa 240  Q
    |||||||||||||||||   ||||||||||||||||| ||||    
T  15917559 gagtatttttgtagagagtgataaattaatgtttatggttaa 15917518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 252
Target Start/End: Original strand, 4841526 - 4841676
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaa-ttcagaaatctttcacattttttgaaagag 203  Q
    |||||||||||||||||||||| || ||||||| ||| | |||| | |||| | |||||||||  |||| || |||||||||||||||||||| ||||||    
T  4841526 aggctttgtttgggagtttggaggggaggggaaagaaaggctttcgagggagagaaatataggacaaaaattaagaaatctttcacatttttttaaagag 4841625  T
Q  204 ta--tttttgtagagaaataaattaatgtttatgattaatatatttttaat 252  Q
    ||  ||||| |||||  ||||||||||| ||||||||||||||||||||||    
T  4841626 tatttttttatagagtgataaattaatgcttatgattaatatatttttaat 4841676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 252
Target Start/End: Original strand, 9684605 - 9684758
Alignment:
Q  102 acttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaa 200  Q
    |||||||||||||||||||||||||| || | ||||||| | | ||| || |||    ||||||||||||||||    ||||||| ||||||||||||||    
T  9684605 acttaggctttgtttgggagtttggaggggaagggaagggaaggcttaggagggttggaaatataggggaaaatgggaaaatcttccacattttttgaaa 9684704  T
Q  201 gagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||| |||| |||| ||  ||||||||||| ||||||||||||||||||||||    
T  9684705 gagtaattttttagaaaatgataaattaatgcttatgattaatatatttttaat 9684758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 252
Target Start/End: Complemental strand, 39012088 - 39011945
Alignment:
Q  109 ctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtattt 208  Q
    |||||||||||||||||||   |||| ||| | | ||||||| |||| | ||||||| ||||||||| ||||| ||||||||||||||||||||  ||||    
T  39012088 ctttgtttgggagtttggagaaaaggagaatgtaagactttgtgggagagaaatatacgggaaaattgagaaa-ctttcacattttttgaaagatgattt 39011990  T
Q  209 ttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    || ||||||   ||||||||||| ||||||||||||||||||||||    
T  39011989 tt-tagagagtgataaattaatgcttatgattaatatatttttaat 39011945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 31633023 - 31632948
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||| |||| || |||||||||||||||||||    
T  31633023 aaatctttcacattttttgaaagagtatttttgtagagaatgataaatgaatgcttctgattaatatatttttaat 31632948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 105 - 252
Target Start/End: Original strand, 3081150 - 3081299
Alignment:
Q  105 taggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 204  Q
    ||||||||||||| |||||||||  | |||||||||||    ||||||||||  || ||||| ||||||||  |||| ||||||||  |||||||| |||    
T  3081150 taggctttgtttgcgagtttggagaggaggggaaggaaaagatttgggggactgaattatagaggaaaattgtgaaacctttcacaaattttgaaatagt 3081249  T
Q  205 atttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||  |||||   ||||||| ||| ||||||||||||||||||||||    
T  3081250 attttttgagagagtgataaattgatgcttatgattaatatatttttaat 3081299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 9096519 - 9096425
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||| |||| ||||  |||||| | ||||||||||||||| ||||||||| |||||||  |||||||||||||| |||||||||||||||||||    
T  9096519 aaatatggggggaaatggagaaatttgtcacattttttgaaaaagtattttt-tagagaatgataaattaatgtttttgattaatatatttttaat 9096425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 19389720 - 19389795
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||| ||||||||||| || |||| |||||||  ||||||||||| ||||||||||||||||||||||    
T  19389720 aaatctttcacaatttttgaaagattaattttttagagaatgataaattaatgcttatgattaatatatttttaat 19389795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 35704821 - 35704727
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaa 251  Q
    |||||||||  |||||  ||||||||||||||||||||||||  |||||||| |||||||  |||||||| || ||||||||||| |||||||||    
T  35704821 aaatataggaaaaaatagagaaatctttcacattttttgaaaatgtatttttttagagaatgataaattagtgcttatgattaatgtatttttaa 35704727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 3924746 - 3924823
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||| |||||||||||||||| ||||||| |||| |||||||  ||||||||||||||| ||||| ||||||||||||    
T  3924746 agaattctttcacattttttggaagagtaattttttagagaatgataaattaatgtttaagattactatatttttaat 3924823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 249
Target Start/End: Original strand, 19337041 - 19337189
Alignment:
Q  101 gacttaggctttgtttgggagtttggaagga-aggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaa 199  Q
    ||||| |||||| |||| ||||||| ||||| |||||||||||   |||||||||||| ||  || || ||| ||| | |||| ||||||||||||| ||    
T  19337041 gacttgggctttctttgagagtttg-aaggagaggggaaggaagagctttgggggacaaaagaatcggagaacattgataaatttttcacattttttaaa 19337139  T
Q  200 agagtatttttgtagagaaataaattaatgtttatgattaatatattttt 249  Q
    |||||||||||  ||||  ||||||||||| |||| |||||||| |||||    
T  19337140 agagtatttttagagagtgataaattaatgcttataattaatattttttt 19337189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 32824858 - 32824762
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgt-agagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||| ||||  |||||||||| |||  ||||| || ||||||||| | ||||||  ||||||||||||||||||||||||||||||||||    
T  32824858 aaatatagggggaaatggagaaatcttttacacattttgtaatagtattttttttagagaataataaattaatgtttatgattaatatatttttaat 32824762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 12063854 - 12063953
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagta------tttttgtagagaaataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||| |||||| |||||| ||||| ||||||||||||||||      ||||| |||||  ||||||||||| ||||| ||||||||||||||||    
T  12063854 aaatatagggaaaaattgagaaatttttcatattttttgaaagagtatttttttttttatagagtgataaattaatgcttatggttaatatatttttaat 12063953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 17668026 - 17668097
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttt 248  Q
    ||||||||||||||||||||||||||| |||| ||| |||  ||||||||||| ||||| ||||||||||||    
T  17668026 aaatctttcacattttttgaaagagtaattttttagggaatgataaattaatgcttatgcttaatatatttt 17668097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 28523807 - 28523732
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||| ||||||||||||| |  |||| || ||||  ||||||||||||||||||||||||||||||||||    
T  28523807 aaatctttcatattttttgaaagaatgattttttaaagaatgataaattaatgtttatgattaatatatttttaat 28523732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 1175851 - 1175913
Alignment:
Q  192 tttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||| || |||||||||||||  |||||| |||||||||||||||||||||||||||    
T  1175851 tttttgaaagggtgtttttgtagagaatgataaatgaatgtttatgattaatatatttttaat 1175913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 210
Target Start/End: Original strand, 21916121 - 21916228
Alignment:
Q  105 taggctttgtttgggagtttggaaggaaggggaaggaatgactttggggga-cataaatataggggaaaattcagaaatctttcacatt-ttttgaaaga 202  Q
    |||||||| |||||||||||||| |||| ||||||| ||||||||||||||  | |||||||  ||||| |   ||||||||||||||| |||||||| |    
T  21916121 taggctttatttgggagtttggagggaaagggaagggatgactttgggggatgagaaatataaaggaaactggtgaaatctttcacattcttttgaaata 21916220  T
Q  203 gtattttt 210  Q
    ||||||||    
T  21916221 gtattttt 21916228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 27350905 - 27350970
Alignment:
Q  186 tcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    ||||||||||| |||||||| |||| |||||||  ||||||||||| |||||||||||||||||||    
T  27350905 tcacatttttttaaagagtaattttttagagaacgataaattaatgattatgattaatatattttt 27350970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 252
Target Start/End: Original strand, 35704925 - 35705013
Alignment:
Q  166 ggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||  ||| ||||| | ||||||||||| ||||||| || |||| ||  ||||||||||| ||||||||||||||||||||||    
T  35704925 ggggaaaatggagagatcttcctcattttttgaatgagtattcttttagaaaatcataaattaatgcttatgattaatatatttttaat 35705013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 252
Target Start/End: Complemental strand, 37909188 - 37909105
Alignment:
Q  170 aaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||| ||||| |||||||||||| || |||||||||||| |||||||  |||||||||||||||| ||| ||| |||||||||    
T  37909188 aaaattgagaaagctttcacattttctggaagagtattttt-tagagaatgataaattaatgtttataattgataaatttttaat 37909105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 35042393 - 35042318
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||| |||||||||||||  | |||| |||||||  ||||||||||||||||||| | ||||||||||||    
T  35042393 aaatctttcatattttttgaaagataaattttttagagaatgataaattaatgtttatgatcactatatttttaat 35042318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 15400015 - 15399929
Alignment:
Q  168 ggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaaa--taaattaatgtttatgattaatatatttttaat 252  Q
    |||||||| ||| || |||||||||||| ||||||| | |||| |||||||   || |||||| |||||||||||||||||||||||    
T  15400015 ggaaaattgagatatgtttcacatttttcgaaagagcaattttttagagaatgctagattaatttttatgattaatatatttttaat 15399929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 22114897 - 22114819
Alignment:
Q  177 agaaatctttcacattttttgaaagagtat-ttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||||||| ||||||||| |||| |||||||  |||||| | |||| |||||| |||||||||||||    
T  22114897 agaaatctttcacatttttttaaagagtattttttttagagaatgataaatcagtgttaatgattcatatatttttaat 22114819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 252
Target Start/End: Complemental strand, 8944244 - 8944159
Alignment:
Q  170 aaaattcagaaatctttcacattttttgaaagagta-tttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||| |||||||||| | ||||||| |||||||| ||||| |||||||  |||||||||||  |||||||| ||||||||||||    
T  8944244 aaaattgagaaatcttttaaattttttaaaagagtagtttttttagagaatgataaattaatgcatatgattactatatttttaat 8944159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 6373338 - 6373255
Alignment:
Q  169 gaaaattcagaaatctttcacattttttgaaagagtat-ttttgtag--agaaataaattaatgtttatgattaatatattttt 249  Q
    ||||||| |||||||||| ||||||||||||||||||| |||| |||  ||  ||||||||||  |||||||||||| ||||||    
T  6373338 gaaaattgagaaatcttttacattttttgaaagagtatgttttttagaaagtgataaattaatacttatgattaatacattttt 6373255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 344225 - 344148
Alignment:
Q  179 aaatctttcacatttttt--gaaagagtatttttgtagagaaat--aaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||  |||| |||| |||| ||||||| |  |||||||||||||| |||||| ||||||||||    
T  344225 aaatctttcacattttttttgaaaaagtaattttttagagaattgtaaattaatgtttataattaatgtatttttaat 344148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 5696486 - 5696544
Alignment:
Q  191 ttttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattt 247  Q
    |||||||||| |||  ||||||||||||  ||||| |||||||||||||||||||||||    
T  5696486 ttttttgaaatagtgattttgtagagaatgataaactaatgtttatgattaatatattt 5696544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 35708610 - 35708677
Alignment:
Q  103 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggg-gacataaatatagggg 169  Q
    ||||||||||||||||||||||| | || ||||||||||| | |||||||| || | |||||||||||    
T  35708610 cttaggctttgtttgggagtttgaaggggaggggaaggaaaggctttggggagagagaaatatagggg 35708677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 1176471 - 1176394
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||| ||||  |||||||| ||| | |||||||||||||  |||||| ||| |||||| ||||||||||||||||    
T  1176471 agaaatcattcaacttttttgagagaatttttttgtagagaatgataaatgaatttttatgcttaatatatttttaat 1176394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 248
Target Start/End: Complemental strand, 14157166 - 14157136
Alignment:
Q  218 aataaattaatgtttatgattaatatatttt 248  Q
    |||||||||||||||||||||||||||||||    
T  14157166 aataaattaatgtttatgattaatatatttt 14157136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 26149786 - 26149717
Alignment:
Q  185 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||||| || |||| |||||||  ||||| |||| ||||||||| ||||| |||||||    
T  26149786 ttcacattttttgaaagattagttttttagagaatgataaactaatatttatgattgatatacttttaat 26149717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 249
Target Start/End: Complemental strand, 28154837 - 28154807
Alignment:
Q  219 ataaattaatgtttatgattaatatattttt 249  Q
    |||||||||||||||||||||||||||||||    
T  28154837 ataaattaatgtttatgattaatatattttt 28154807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 249
Target Start/End: Complemental strand, 29709657 - 29709627
Alignment:
Q  219 ataaattaatgtttatgattaatatattttt 249  Q
    |||||||||||||||||||||||||||||||    
T  29709657 ataaattaatgtttatgattaatatattttt 29709627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 35869013 - 35868944
Alignment:
Q  185 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||||| || |||| |||||||  ||||| ||||  |||||||||||||| |||||||    
T  35869013 ttcacattttttgaaagaatagttttttagagaatgataaactaatacttatgattaatatacttttaat 35868944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 5088804 - 5088837
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||| ||||||||||||||    
T  5088804 ataaattaatgtttatgataaatatatttttaat 5088837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 6373409 - 6373368
Alignment:
Q  108 gctttgtttgggagtttggaaggaaggggaaggaatgacttt 149  Q
    ||||||||||||||||||||  ||||||||||||| ||||||    
T  6373409 gctttgtttgggagtttggagtgaaggggaaggaaagacttt 6373368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 6491331 - 6491298
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||| ||||||||||||||||||||||    
T  6491331 ataaattaatgcttatgattaatatatttttaat 6491298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 7147542 - 7147509
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||||||||| |||||||||||    
T  7147542 ataaattaatgtttatgattaaaatatttttaat 7147509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 7782644 - 7782583
Alignment:
Q  114 tttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaatt 175  Q
    ||||||||||||||| | |||||||| ||  |||| |||| ||| |||||||||||||||||    
T  7782644 tttgggagtttggaatggaggggaagaaaatacttcggggcacaaaaatataggggaaaatt 7782583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 26018888 - 26018855
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||| ||||||||||||||||||||||    
T  26018888 ataaattaatgcttatgattaatatatttttaat 26018855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 29799784 - 29799751
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||| ||||||||||||||||||||||    
T  29799784 ataaattaatgcttatgattaatatatttttaat 29799751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 31535219 - 31535276
Alignment:
Q  191 ttttttgaaagagtatttttgtagagaaataaattaatgtttatgattaatatatttt 248  Q
    ||||||||||||||| |||| |||||||  | ||||||| ||||| ||||||||||||    
T  31535219 ttttttgaaagagtaattttttagagaatgatattaatgcttatggttaatatatttt 31535276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 4343040 - 4342964
Alignment:
Q  177 agaaatctttcacat-tttttgaaagagtatttttgtagagaaataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||  ||||||| || || |||||  |||  ||| |||||||||||||||||| ||||||||||||    
T  4343040 agaaatctttcacaaatttttgatagtgtgtttttaaagaataatgaattaatgtttatgattattatatttttaat 4342964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 15060093 - 15060160
Alignment:
Q  183 ctttcacattttttgaaagagtatttttgtagagaaa--taaattaatgtttatgattaatatatttt 248  Q
    ||||||||||||||| ||| | | |||| |||||||   ||||||||| |||||||||||||||||||    
T  15060093 ctttcacattttttggaagggcaattttttagagaaccgtaaattaatatttatgattaatatatttt 15060160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 33682561 - 33682490
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttt 248  Q
    |||||||||||||||||| | |||||| |||| |||| ||  | ||||||||| |||| |||||||||||||    
T  33682561 aaatctttcacatttttttatagagtaattttttagaaaatgaaaaattaatgcttataattaatatatttt 33682490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 4e-28; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 106 - 252
Target Start/End: Complemental strand, 33677285 - 33677137
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattca---gaaatctttcacattttttgaaaga 202  Q
    |||||||||||||| ||||||| || || |||||||| |||||| ||||| | |||||||| | |||||| |   ||||||| |||||||||||||||||    
T  33677285 aggctttgtttgggtgtttggaggggagaggaaggaaagactttaggggaaagaaatatagagaaaaattgatgagaaatctgtcacattttttgaaaga 33677186  T
Q  203 gtatttttgtagagaaataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||| | ||||  ||||||||||| ||||||||||||||||||||||    
T  33677185 gtattttag-agagtgataaattaatgcttatgattaatatatttttaat 33677137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 252
Target Start/End: Complemental strand, 33184426 - 33184280
Alignment:
Q  109 ctttgtttgggagtttggaaggaaggggaaggaatgactttgggg-gacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatt 207  Q
    |||||||||||||||| || |||| | ||| |||  |||||| || || | ||||||| ||||||||| |||||||||||| ||||||||||||||||||    
T  33184426 ctttgtttgggagtttagagggaaagagaaagaaatactttgaggagagagaaatataagggaaaattaagaaatctttcatattttttgaaagagtatt 33184327  T
Q  208 tttgtagaga--aataaattaatgtttatgattaatatatttttaat 252  Q
    ||| ||||||   |||||||||||||||| | |||||||||||||||    
T  33184326 tttttagagagtgataaattaatgtttataactaatatatttttaat 33184280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 252
Target Start/End: Original strand, 8439219 - 8439362
Alignment:
Q  110 tttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttt 209  Q
    |||| ||||||||||||| || ||||||||||| || |||||| |  | ||||| | || |||||  |||||||||| | ||||||||||| ||||||||    
T  8439219 tttgcttgggagtttggagggtaggggaaggaaggattttgggtgtgaaaaataaaaggaaaaatagagaaatcttttatattttttgaaaaagtatttt 8439318  T
Q  210 tgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    | |||||||  ||||||||||||||||||||||||||||||||||    
T  8439319 t-tagagaatgataaattaatgtttatgattaatatatttttaat 8439362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 597007 - 597099
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    |||||||||| |||||| |||||||||||| ||||||| ||||||||| |||||||||||  ||||||||||||||||||||| | |||||||    
T  597007 aaatatagggaaaaattaagaaatctttcatattttttcaaagagtatctttgtagagaacgataaattaatgtttatgattactgtattttt 597099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 245
Target Start/End: Original strand, 25073078 - 25073220
Alignment:
Q  107 ggctttgtttgggagtttggaagga--aggggaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttgaaagag 203  Q
    ||||||||||||||||||||| ||   ||||||||||  ||||||||||| | | |||||||||| |||||| ||||||||||||| |||| | ||||||    
T  25073078 ggctttgtttgggagtttggaggggggaggggaaggacagactttggggggagagaaatatagggaaaaattgagaaatctttcacgttttcttaaagag 25073177  T
Q  204 ta-tttttgtagagaaataaattaatgtttatgattaatatat 245  Q
    || ||||| |||||  ||||||||||| ||||||| |||||||    
T  25073178 tattttttttagagtgataaattaatgcttatgatcaatatat 25073220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 2523600 - 2523506
Alignment:
Q  158 taaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa-ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||| ||||||||| | |||||||||||| ||||||||| | |||| || ||||||  ||| || |||||||||||||||||||||||||||    
T  2523600 taaatataagggaaaattgaaaaatctttcacactttttgaaaaa-tattgttttagagatgatacatcaatgtttatgattaatatatttttaat 2523506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 2502196 - 2502246
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttt 209  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  2502196 aaatatatgggaaaaatgagaaatctttcacattttttgaaagagtatttt 2502246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 16329568 - 16329493
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||| ||||||||||||||| || |||| |||||||  ||||||||||| | |||||||| |||||||||||    
T  16329568 aaatcttttacattttttgaaagaataattttttagagaatgataaattaatgctaatgattaaaatatttttaat 16329493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 26683505 - 26683431
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||| |||||||||||||||| |||| | |||||  ||||||||||| || |||||||||||||||||||    
T  26683505 aaatctttcatattttttgaaagagtaatttttt-gagaatgataaattaatgcttgtgattaatatatttttaat 26683431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 33939016 - 33939090
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||||||||| |||  ||| ||||  ||||||  ||||||||||||||||||||||||||||||||||    
T  33939016 aaatctttcacatttttttaaaatgtaatttta-agagaatgataaattaatgtttatgattaatatatttttaat 33939090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 20381762 - 20381833
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaaataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||| |||||||||||||||| |||| | | ||  |||||||||| |||||||| |||||||||||||    
T  20381762 aaatctttcatattttttgaaagagtagttttttgggga--taaattaatgattatgattgatatatttttaat 20381833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 4465073 - 4465040
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||||||||||||||||||    
T  4465073 ataaattaatgtttatgattaatatatttttaat 4465040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 13120313 - 13120389
Alignment:
Q  179 aaatctttcacatttttt-gaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||| ||||||||| ||||||||| |||| |||||||  |||||||||||  ||| |||||||||||||||||    
T  13120313 aaatcttttacatttttttgaaagagtaattttttagagaatgataaattaatgagtataattaatatatttttaat 13120389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 32222179 - 32222119
Alignment:
Q  191 ttttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    ||||||||||||||| || | |||||||  ||||||||||||||||||||| |||||||||    
T  32222179 ttttttgaaagagtagttgtttagagaatgataaattaatgtttatgattactatattttt 32222119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 32549696 - 32549768
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    |||||||| |||||| ||||||||||| |||| |||| ||  |||||||||| |||||||||| |||||||||    
T  32549696 aaatcttttacatttcttgaaagagtagttttctagaaaatgataaattaatatttatgattactatattttt 32549768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 6695504 - 6695413
Alignment:
Q  160 aatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    |||||| || |||||  |||||| ||||| | ||||||||||||||||||| |||||||  |||||| |||| |||| ||||||||| ||||    
T  6695504 aatatatggaaaaatggagaaatttttcatactttttgaaagagtatttttttagagaatgataaatgaatgcttataattaatataatttt 6695413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 22817246 - 22817308
Alignment:
Q  192 tttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||| ||||||||||||| || ||||  |||||| |||| ||||||||||||||||||||||    
T  22817246 tttttaaaagagtatttttataaagaatgataaatgaatgcttatgattaatatatttttaat 22817308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 4465175 - 4465077
Alignment:
Q  106 aggctttgtttgggagtttggaaggaag-gggaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttgaaaga 202  Q
    |||||||||||| ||||||| |||| |  ||||||||| | ||||||||| | | ||||||| | ||| ||| |||||||||||||||||||| |||||    
T  4465175 aggctttgtttgagagtttgaaagggatcgggaaggaaaggctttggggggagagaaatataagtgaatattgagaaatctttcacatttttttaaaga 4465077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 33590219 - 33590296
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||| |||||  |||||| |||||||| |||| |||||||  |||||||||||  |||||||| ||||||||||||    
T  33590219 agaaatttttcaatttttttaaaagagtagttttttagagaatgataaattaatgcatatgattactatatttttaat 33590296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 2502300 - 2502333
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||| ||||||||||||||||||||||    
T  2502300 ataaattaatgcttatgattaatatatttttaat 2502333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 6855798 - 6855765
Alignment:
Q  219 ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||||||| |||||||||||||||||||||    
T  6855798 ataaattaatgtatatgattaatatatttttaat 6855765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 8559185 - 8559246
Alignment:
Q  114 tttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaatt 175  Q
    |||| ||||||| || | |||||||| || |||||||||| ||| |||||||||||||||||    
T  8559185 tttgagagtttgaaatggaggggaagaaaagactttggggaacaaaaatataggggaaaatt 8559246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 26289721 - 26289665
Alignment:
Q  198 aaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||| |||||||||||||||  |||||||||||  |||||||| ||||||||||||    
T  26289721 aaagattatttttgtagagaatgataaattaatgcatatgattactatatttttaat 26289665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 28551722 - 28551759
Alignment:
Q  103 cttaggctttgtttgggagtttggaaggaaggggaagg 140  Q
    ||||||||||||||||||||||||| || |||||||||    
T  28551722 cttaggctttgtttgggagtttggaggggaggggaagg 28551759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 5825595 - 5825547
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatgactttggggg 154  Q
    |||||||||||||||||||||| || | |||| |||| |||||||||||    
T  5825595 aggctttgtttgggagtttggaggggaagggagggaaggactttggggg 5825547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 9104826 - 9104912
Alignment:
Q  167 gggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||  ||||||||||||  |||||||||||||||||| | |||||||  ||||| | ||| |||||||| |||| ||||||||    
T  9104826 gggaaaatggagaaatctttcatgttttttgaaagagtatttatttagagaatgataaact-atgcttatgattgatatttttttaat 9104912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 252
Target Start/End: Original strand, 1894 - 2044
Alignment:
Q  106 aggctttgtttgggagtttggaaggaaggggaaggaatga-ctttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 204  Q
    ||||||||||||||||||||||||| ||||||||||| || ||  |||||| | |||||||||| |||||| | |||||||| | ||||||||||| |||    
T  1894 aggctttgtttgggagtttggaagggaggggaaggaaagagctcggggggagagaaatatagggaaaaattgataaatcttttatattttttgaaatagt 1993  T
Q  205 atttttgt---agagaaataaattaatgtttatgattaatatatttttaat 252  Q
    |||||| |   ||||  ||||||||||  |||| ||||| |||||||||||    
T  1994 attttttttagagagtgataaattaatacttataattaaaatatttttaat 2044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1763 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1763
Description:

Target: scaffold1763; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 496 - 571
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaaa--taaattaatgtttatgattaatatatttttaat 252  Q
    |||| ||||||||||||||||||||||  ||| |||||||   |||||||||||||||||||||||||||||||||    
T  496 aaatatttcacattttttgaaagagtaaatttttagagaatgttaaattaatgtttatgattaatatatttttaat 571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 4337 - 4260
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||| ||||||||||| |||||||| |||| | |||||  ||||||||||| ||||||||||||||||||||||    
T  4337 agaaatctatcacattttttaaaagagtaattttttggagaatgataaattaatgcttatgattaatatatttttaat 4260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 4021 - 4059
Alignment:
Q  99 gcgacttaggctttgtttgggagtttggaaggaagggga 137  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  4021 gcgacttaggctttgtttgggagtttggaggggagggga 4059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 4668 - 4591
Alignment:
Q  177 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||| ||||||||||| |||||||| |||| | |||||  ||||||||||| ||||||||||||||||||||||    
T  4668 agaaatctatcacattttttaaaagagtaattttttggagaatgataaattaatgcttatgattaatatatttttaat 4591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 4352 - 4390
Alignment:
Q  99 gcgacttaggctttgtttgggagtttggaaggaagggga 137  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  4352 gcgacttaggctttgtttgggagtttggaggggagggga 4390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 252
Target Start/End: Original strand, 59668 - 59828
Alignment:
Q  102 acttaggctttgtttgggagtttggaaggaagggga-----aggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttt 195  Q
    |||||||||||||||||||||||||| || ||||||     ||||| | |||||| |||| | ||||||||| ||||||| | |||| ||| ||||||||    
T  59668 acttaggctttgtttgggagtttggaggggaggggaggggaaggaaagtctttggagggagagaaatataggagaaaattgataaattttttacattttt 59767  T
Q  196 tgaaagagtatttttgt----agagaaataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||| ||||||| |    ||||  ||| ||||||  ||||||||||| ||||||||||    
T  59768 tgaaagactatttttttttagagagtgatagattaattcttatgattaatttatttttaat 59828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 9024 - 8979
Alignment:
Q  159 aaatataggggaaaattcagaaatctttcacattttttgaaagagt 204  Q
    ||||||||| ||||||| |||| |||||||||||||||||||||||    
T  9024 aaatataggagaaaattgagaactctttcacattttttgaaagagt 8979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 30655 - 30567
Alignment:
Q  167 gggaaaattcagaaatctttcacattttttgaaagagta-tttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||| |||| |||||||||| | ||||||| |||||||| ||||| |||||||  |||||||||||  |||||||| ||||||||||||    
T  30655 gggagaattgagaaatcttttaaattttttaaaagagtagtttttttagagaatgataaattaatgcatatgattactatatttttaat 30567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 37323 - 37235
Alignment:
Q  167 gggaaaattcagaaatctttcacattttttgaaagagta-tttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||| |||| |||||||||| | ||||||| |||||||| ||||| |||||||  |||||||||||  |||||||| ||||||||||||    
T  37323 gggagaattgagaaatcttttaaattttttaaaagagtagtttttttagagaatgataaattaatgcatatgattactatatttttaat 37235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 1761 - 1692
Alignment:
Q  185 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||||||  | |||| |||||||  ||||| ||||  ||||||||||||||||||||||    
T  1761 ttcacattttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatatttttaat 1692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 1428 - 1485
Alignment:
Q  194 tttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 249  Q
    ||||||||| ||| |||||||||||  ||||||||||| ||||||| |||||||||||    
T  1428 tttgaaagattatatttgtagagaataataaattaatggttatgatcaatatattttt 1485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0927 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0927
Description:

Target: scaffold0927; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 2798 - 2877
Alignment:
Q  177 agaaatctttcaca--ttttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    ||||||||||||||  |||||||||||||| |||||  ||||||  ||||| ||||  |||||||| |||||||||||||    
T  2798 agaaatctttcacattttttttgaaagagtgttttttaagagaatgataaactaatacttatgattcatatatttttaat 2877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 44869 - 44944
Alignment:
Q  179 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 252  Q
    |||||||| | ||||||| |||||||| |||| |||||||  |||| ||||||  |||||||| ||||||||||||    
T  44869 aaatcttttaaattttttaaaagagtaattttttagagaatgataatttaatgcatatgattactatatttttaat 44944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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