View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19727_low_41 (Length: 247)
Name: NF19727_low_41
Description: NF19727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19727_low_41 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 48570044 - 48569807
Alignment:
| Q |
1 |
gtctcccttcactaaaattcaaaaaggttacaatgcttatttcaagtaaaatatttcgccaactaagattgagctagcgatagggttagactctcgcaac |
100 |
Q |
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| T |
48570044 |
gtctcccttcactaaaattcaaaaaggttacgatgcttatttcaagtaaaatatttcgccaactaagattgagctagcgatagggttagactctcgcaac |
48569945 |
T |
|
| Q |
101 |
atgacaaactcaagtttgaatactagttatagttaagagaggtatctacatgttgcgatccgacacaacttgaataggattacctcatatggaggatcct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48569944 |
atgacaaactcaagtttgaatactagttatagttaagagaggtatctacatgttgcgatccgacacaacttgaataggattacctcatatggaggatcct |
48569845 |
T |
|
| Q |
201 |
ctagaaaaccaaaactatatattttacatcagtataat |
238 |
Q |
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|||||||||||||||||||||||||||| ||||||||| |
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| T |
48569844 |
ctagaaaaccaaaactatatattttacaacagtataat |
48569807 |
T |
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