View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19727_low_48 (Length: 227)

Name: NF19727_low_48
Description: NF19727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19727_low_48
NF19727_low_48
[»] chr5 (43 HSPs)
chr5 (86-227)||(18486864-18487005)
chr5 (86-227)||(25523067-25523208)
chr5 (112-227)||(19752935-19753050)
chr5 (111-218)||(24332936-24333043)
chr5 (112-227)||(19754092-19754207)
chr5 (86-218)||(28538674-28538806)
chr5 (129-227)||(25524060-25524158)
chr5 (80-218)||(22940594-22940731)
chr5 (84-217)||(16650827-16650960)
chr5 (112-227)||(2686363-2686478)
chr5 (111-218)||(42195156-42195262)
chr5 (112-218)||(36486459-36486565)
chr5 (86-227)||(5778798-5778939)
chr5 (143-218)||(16650047-16650122)
chr5 (112-227)||(18485162-18485284)
chr5 (112-206)||(5777923-5778017)
chr5 (112-218)||(28539791-28539897)
chr5 (112-218)||(36485324-36485430)
chr5 (112-220)||(25056349-25056458)
chr5 (125-217)||(25055449-25055541)
chr5 (116-218)||(2186798-2186900)
chr5 (117-227)||(5730824-5730934)
chr5 (86-218)||(33160258-33160389)
chr5 (86-218)||(42196171-42196303)
chr5 (131-210)||(21835083-21835162)
chr5 (86-218)||(40255643-40255775)
chr5 (112-218)||(1015508-1015614)
chr5 (112-178)||(33158122-33158188)
chr5 (112-191)||(1796078-1796157)
chr5 (111-218)||(1797268-1797375)
chr5 (112-183)||(7311614-7311685)
chr5 (111-215)||(18154517-18154619)
chr5 (114-215)||(5962546-5962647)
chr5 (111-191)||(20216761-20216841)
chr5 (112-162)||(34893689-34893739)
chr5 (111-191)||(20214218-20214298)
chr5 (120-175)||(25524141-25524196)
chr5 (116-164)||(2685772-2685820)
chr5 (175-215)||(2685872-2685912)
chr5 (111-163)||(5730465-5730517)
chr5 (111-191)||(38834110-38834189)
chr5 (176-217)||(5730514-5730555)
chr5 (158-206)||(5961476-5961524)
[»] chr7 (42 HSPs)
chr7 (112-227)||(18371448-18371563)
chr7 (116-227)||(18372419-18372530)
chr7 (111-227)||(22629509-22629625)
chr7 (86-227)||(22630414-22630555)
chr7 (86-226)||(7501815-7501955)
chr7 (111-227)||(7500477-7500593)
chr7 (112-227)||(47369805-47369920)
chr7 (112-227)||(31659647-31659762)
chr7 (86-227)||(3227556-3227697)
chr7 (112-216)||(21505438-21505542)
chr7 (86-227)||(31949320-31949461)
chr7 (112-218)||(42886257-42886363)
chr7 (121-218)||(14999126-14999223)
chr7 (112-227)||(31949764-31949879)
chr7 (116-227)||(3227135-3227246)
chr7 (112-227)||(47525329-47525444)
chr7 (112-218)||(17781685-17781791)
chr7 (112-227)||(127360-127474)
chr7 (156-215)||(14998048-14998107)
chr7 (116-226)||(46482625-46482735)
chr7 (86-184)||(17782558-17782656)
chr7 (112-218)||(128572-128678)
chr7 (149-227)||(30439320-30439398)
chr7 (111-191)||(11662549-11662629)
chr7 (158-218)||(32253398-32253458)
chr7 (159-218)||(770732-770791)
chr7 (112-191)||(48934901-48934980)
chr7 (116-218)||(769441-769543)
chr7 (111-189)||(11658402-11658480)
chr7 (112-215)||(597260-597360)
chr7 (112-227)||(6618231-6618346)
chr7 (116-218)||(34352757-34352859)
chr7 (112-162)||(47524549-47524599)
chr7 (114-183)||(34351518-34351587)
chr7 (112-160)||(20163585-20163633)
chr7 (112-207)||(31660991-31661086)
chr7 (111-226)||(43899469-43899584)
chr7 (112-227)||(43900451-43900565)
chr7 (158-220)||(21508402-21508464)
chr7 (111-180)||(48933690-48933759)
chr7 (115-162)||(34174010-34174057)
chr7 (159-205)||(46483521-46483567)
[»] chr3 (67 HSPs)
chr3 (112-227)||(12700197-12700312)
chr3 (87-218)||(54540761-54540892)
chr3 (86-227)||(7758400-7758541)
chr3 (86-218)||(19984847-19984979)
chr3 (112-227)||(47614209-47614324)
chr3 (111-227)||(34019107-34019223)
chr3 (111-218)||(7267666-7267773)
chr3 (112-227)||(12703462-12703577)
chr3 (86-218)||(19986041-19986175)
chr3 (127-227)||(8875945-8876045)
chr3 (112-227)||(11671303-11671418)
chr3 (115-218)||(31645000-31645103)
chr3 (112-227)||(47610542-47610657)
chr3 (86-219)||(534497-534630)
chr3 (86-218)||(29931224-29931356)
chr3 (112-227)||(29932661-29932775)
chr3 (86-218)||(29980378-29980510)
chr3 (112-227)||(29981815-29981929)
chr3 (116-227)||(51470000-51470111)
chr3 (87-219)||(54539754-54539886)
chr3 (158-226)||(47615540-47615608)
chr3 (116-227)||(8456505-8456616)
chr3 (86-218)||(22776783-22776915)
chr3 (111-218)||(23770378-23770485)
chr3 (112-218)||(47609721-47609827)
chr3 (81-218)||(46721191-46721328)
chr3 (111-217)||(46719964-46720070)
chr3 (111-217)||(55191967-55192073)
chr3 (112-227)||(51470417-51470532)
chr3 (112-218)||(7268798-7268904)
chr3 (116-218)||(49216275-49216377)
chr3 (112-184)||(535787-535859)
chr3 (111-227)||(11670407-11670523)
chr3 (111-218)||(40426749-40426857)
chr3 (112-227)||(6249633-6249747)
chr3 (111-218)||(23769880-23769986)
chr3 (112-190)||(24516484-24516562)
chr3 (112-218)||(52840575-52840681)
chr3 (116-218)||(54986978-54987080)
chr3 (115-219)||(5029653-5029757)
chr3 (147-220)||(52105636-52105709)
chr3 (131-219)||(6171213-6171299)
chr3 (111-191)||(51037558-51037638)
chr3 (111-218)||(4271463-4271570)
chr3 (112-164)||(6170296-6170348)
chr3 (111-227)||(51347291-51347407)
chr3 (112-215)||(52104503-52104604)
chr3 (112-218)||(52839061-52839167)
chr3 (112-217)||(18442655-18442760)
chr3 (112-217)||(19487729-19487834)
chr3 (22-87)||(49757236-49757301)
chr3 (86-191)||(51038788-51038893)
chr3 (86-146)||(47615591-47615651)
chr3 (159-217)||(53897173-53897231)
chr3 (120-174)||(53901403-53901457)
chr3 (115-219)||(5001227-5001336)
chr3 (112-217)||(28262216-28262321)
chr3 (168-227)||(46492979-46493038)
chr3 (86-217)||(28263083-28263214)
chr3 (115-217)||(52276331-52276433)
chr3 (115-217)||(52281519-52281621)
chr3 (121-205)||(55191544-55191627)
chr3 (150-219)||(784917-784986)
chr3 (112-217)||(18456035-18456140)
chr3 (131-219)||(6250547-6250634)
chr3 (158-218)||(22775816-22775876)
chr3 (111-191)||(53614842-53614921)
[»] chr4 (52 HSPs)
chr4 (111-227)||(12129646-12129762)
chr4 (82-220)||(1835071-1835209)
chr4 (86-218)||(1290169-1290301)
chr4 (112-227)||(8155760-8155876)
chr4 (86-227)||(25685784-25685925)
chr4 (88-227)||(10471350-10471489)
chr4 (112-218)||(31600956-31601062)
chr4 (112-218)||(49307999-49308104)
chr4 (112-218)||(19750546-19750652)
chr4 (112-218)||(19789154-19789260)
chr4 (112-218)||(31599813-31599919)
chr4 (112-218)||(1834143-1834250)
chr4 (112-218)||(5525383-5525489)
chr4 (111-217)||(8758809-8758915)
chr4 (116-218)||(10448231-10448333)
chr4 (87-218)||(10470545-10470676)
chr4 (112-218)||(13509330-13509436)
chr4 (112-218)||(25684958-25685064)
chr4 (111-207)||(10447030-10447126)
chr4 (112-220)||(17383016-17383124)
chr4 (112-227)||(5526088-5526203)
chr4 (111-218)||(52491578-52491685)
chr4 (112-218)||(13386503-13386609)
chr4 (112-218)||(37728536-37728642)
chr4 (84-227)||(13386010-13386155)
chr4 (112-220)||(17388180-17388288)
chr4 (111-218)||(8757697-8757804)
chr4 (111-218)||(35935504-35935611)
chr4 (86-206)||(48780246-48780366)
chr4 (120-218)||(50909643-50909742)
chr4 (113-218)||(49306799-49306903)
chr4 (86-191)||(1963194-1963299)
chr4 (111-195)||(21539065-21539149)
chr4 (112-184)||(26421627-26421699)
chr4 (111-218)||(1289120-1289227)
chr4 (112-219)||(21178020-21178127)
chr4 (112-218)||(35934366-35934472)
chr4 (111-218)||(37727720-37727826)
chr4 (111-218)||(46638696-46638803)
chr4 (112-227)||(48781008-48781122)
chr4 (112-220)||(3928827-3928935)
chr4 (116-215)||(33296251-33296350)
chr4 (111-189)||(27257960-27258038)
chr4 (88-190)||(1964440-1964542)
chr4 (115-219)||(14868916-14869019)
chr4 (115-219)||(14876915-14877018)
chr4 (112-191)||(33310087-33310166)
chr4 (120-205)||(50909304-50909388)
chr4 (112-220)||(3927690-3927798)
chr4 (178-215)||(54107949-54107986)
chr4 (112-209)||(54110608-54110705)
chr4 (111-171)||(55603549-55603609)
[»] chr8 (53 HSPs)
chr8 (112-227)||(1824040-1824155)
chr8 (112-227)||(1858485-1858600)
chr8 (112-227)||(10006368-10006483)
chr8 (112-226)||(5514005-5514119)
chr8 (86-227)||(10007725-10007866)
chr8 (112-218)||(24123869-24123975)
chr8 (77-218)||(30335628-30335769)
chr8 (112-220)||(22221333-22221441)
chr8 (112-220)||(22227675-22227783)
chr8 (112-218)||(18970934-18971040)
chr8 (112-218)||(30336472-30336578)
chr8 (112-217)||(22220412-22220517)
chr8 (112-212)||(32207302-32207402)
chr8 (111-218)||(43661288-43661395)
chr8 (112-218)||(18978043-18978149)
chr8 (112-218)||(24122906-24123012)
chr8 (111-227)||(1823575-1823692)
chr8 (111-227)||(1858020-1858137)
chr8 (111-218)||(12351944-12352051)
chr8 (111-218)||(12353332-12353438)
chr8 (111-218)||(29968308-29968415)
chr8 (112-218)||(8388486-8388592)
chr8 (116-218)||(30568914-30569016)
chr8 (84-218)||(8389660-8389794)
chr8 (112-218)||(18979091-18979197)
chr8 (158-227)||(11456679-11456748)
chr8 (111-218)||(11282031-11282138)
chr8 (111-218)||(43661794-43661901)
chr8 (112-218)||(2379895-2379999)
chr8 (140-218)||(30570227-30570305)
chr8 (147-218)||(24359866-24359937)
chr8 (111-218)||(29043421-29043528)
chr8 (111-218)||(40471118-40471224)
chr8 (112-218)||(11287800-11287906)
chr8 (120-206)||(18488245-18488331)
chr8 (147-218)||(2378919-2378990)
chr8 (111-218)||(11283180-11283287)
chr8 (112-191)||(24488678-24488756)
chr8 (111-218)||(40469363-40469470)
chr8 (148-226)||(34625163-34625241)
chr8 (120-200)||(5514260-5514339)
chr8 (112-220)||(32973905-32974013)
chr8 (149-226)||(23169954-23170031)
chr8 (86-220)||(32968454-32968588)
chr8 (112-219)||(45112894-45113000)
chr8 (112-218)||(45114488-45114593)
chr8 (112-217)||(38974819-38974924)
chr8 (112-217)||(38980016-38980121)
chr8 (112-217)||(39005917-39006022)
chr8 (112-217)||(39011113-39011218)
chr8 (146-217)||(17844333-17844403)
chr8 (112-184)||(5003103-5003175)
chr8 (86-184)||(42982662-42982760)
[»] chr6 (35 HSPs)
chr6 (112-227)||(7314904-7315018)
chr6 (86-227)||(7316256-7316397)
chr6 (112-218)||(1829574-1829680)
chr6 (86-227)||(8659263-8659404)
chr6 (86-218)||(27437826-27437958)
chr6 (86-217)||(16704469-16704600)
chr6 (112-218)||(26575025-26575131)
chr6 (112-227)||(17496821-17496937)
chr6 (112-227)||(3721636-3721751)
chr6 (86-206)||(8821871-8821991)
chr6 (88-206)||(8822776-8822894)
chr6 (111-215)||(6840215-6840319)
chr6 (112-219)||(10785883-10785990)
chr6 (111-205)||(10784616-10784710)
chr6 (112-218)||(26574643-26574748)
chr6 (78-218)||(14823546-14823687)
chr6 (115-219)||(27322038-27322142)
chr6 (112-227)||(34834541-34834656)
chr6 (112-218)||(8660175-8660280)
chr6 (146-218)||(5658814-5658886)
chr6 (111-218)||(14822383-14822490)
chr6 (120-210)||(3333005-3333095)
chr6 (113-218)||(34830927-34831032)
chr6 (148-226)||(3333488-3333566)
chr6 (113-189)||(12350823-12350898)
chr6 (120-220)||(12382680-12382780)
chr6 (111-218)||(26949156-26949260)
chr6 (86-218)||(6842254-6842386)
chr6 (115-219)||(27318341-27318447)
chr6 (158-218)||(26717084-26717144)
chr6 (115-205)||(16703595-16703684)
chr6 (86-163)||(3722533-3722610)
chr6 (112-191)||(30494580-30494659)
chr6 (111-215)||(29473100-29473204)
chr6 (112-191)||(30495695-30495775)
[»] chr1 (56 HSPs)
chr1 (111-218)||(39153087-39153194)
chr1 (112-227)||(43059968-43060083)
chr1 (86-218)||(11437170-11437302)
chr1 (112-227)||(36613866-36613981)
chr1 (88-218)||(45148581-45148710)
chr1 (86-227)||(24422798-24422939)
chr1 (112-218)||(45149941-45150048)
chr1 (87-218)||(11436041-11436172)
chr1 (116-218)||(45157180-45157282)
chr1 (88-218)||(51684366-51684496)
chr1 (111-227)||(36612876-36612991)
chr1 (111-227)||(50680354-50680470)
chr1 (86-215)||(51685739-51685868)
chr1 (112-223)||(43058809-43058920)
chr1 (111-227)||(39222435-39222551)
chr1 (111-218)||(39151954-39152061)
chr1 (111-227)||(37526840-37526955)
chr1 (112-227)||(24426037-24426152)
chr1 (116-227)||(25652742-25652853)
chr1 (112-227)||(52274992-52275107)
chr1 (112-218)||(39699738-39699844)
chr1 (112-218)||(44404466-44404572)
chr1 (112-220)||(35594241-35594347)
chr1 (112-227)||(41364852-41364967)
chr1 (111-218)||(43378684-43378791)
chr1 (112-204)||(33088602-33088694)
chr1 (111-198)||(7675450-7675537)
chr1 (111-218)||(40384748-40384855)
chr1 (116-227)||(52828032-52828143)
chr1 (80-219)||(35066972-35067111)
chr1 (112-218)||(52827371-52827477)
chr1 (112-218)||(35595163-35595270)
chr1 (86-200)||(23980455-23980569)
chr1 (112-227)||(30249452-30249567)
chr1 (112-227)||(41366093-41366207)
chr1 (111-218)||(45156072-45156179)
chr1 (112-227)||(52276125-52276240)
chr1 (112-218)||(7983073-7983179)
chr1 (87-218)||(39698562-39698692)
chr1 (112-218)||(46066547-46066652)
chr1 (112-218)||(14999308-14999411)
chr1 (112-218)||(14999926-15000032)
chr1 (88-227)||(50681570-50681705)
chr1 (176-227)||(39221402-39221453)
chr1 (123-218)||(44411937-44412032)
chr1 (112-219)||(16290118-16290225)
chr1 (146-220)||(30248170-30248243)
chr1 (112-220)||(31194077-31194185)
chr1 (112-167)||(7674551-7674605)
chr1 (112-215)||(33088091-33088194)
chr1 (111-218)||(43377743-43377850)
chr1 (112-217)||(33739117-33739222)
chr1 (111-191)||(12389980-12390059)
chr1 (148-218)||(2940325-2940395)
chr1 (86-180)||(11190383-11190477)
chr1 (162-218)||(46525772-46525827)
[»] chr2 (48 HSPs)
chr2 (112-227)||(22848215-22848330)
chr2 (112-220)||(18797271-18797379)
chr2 (86-226)||(18904365-18904505)
chr2 (86-227)||(18905950-18906090)
chr2 (112-227)||(13030314-13030428)
chr2 (112-214)||(22587929-22588030)
chr2 (112-227)||(11258773-11258888)
chr2 (112-218)||(18299397-18299503)
chr2 (112-226)||(28617946-28618059)
chr2 (112-217)||(18300697-18300801)
chr2 (114-218)||(26545492-26545596)
chr2 (86-218)||(36449776-36449908)
chr2 (86-218)||(38840464-38840596)
chr2 (86-213)||(23869511-23869637)
chr2 (112-218)||(24475248-24475354)
chr2 (116-217)||(802563-802664)
chr2 (86-218)||(7899853-7899985)
chr2 (112-218)||(22587525-22587630)
chr2 (116-217)||(810753-810854)
chr2 (112-227)||(18869124-18869241)
chr2 (111-218)||(38839265-38839372)
chr2 (111-219)||(36450891-36450999)
chr2 (111-218)||(7898714-7898821)
chr2 (111-218)||(41878114-41878224)
chr2 (112-227)||(11257646-11257760)
chr2 (111-218)||(41879183-41879290)
chr2 (112-217)||(13570529-13570634)
chr2 (112-220)||(8535625-8535733)
chr2 (112-171)||(32739647-32739706)
chr2 (88-227)||(1034432-1034570)
chr2 (120-218)||(11996739-11996837)
chr2 (143-218)||(26544203-26544278)
chr2 (112-205)||(18868948-18869039)
chr2 (158-227)||(21837109-21837178)
chr2 (86-219)||(11938759-11938891)
chr2 (116-191)||(13568000-13568073)
chr2 (113-170)||(24476863-24476920)
chr2 (147-218)||(32739710-32739781)
chr2 (112-206)||(1033234-1033327)
chr2 (148-226)||(22067745-22067823)
chr2 (111-191)||(16446177-16446257)
chr2 (148-227)||(1410060-1410139)
chr2 (111-220)||(8534605-8534713)
chr2 (147-191)||(1093144-1093188)
chr2 (111-181)||(5819721-5819791)
chr2 (112-142)||(21837092-21837122)
chr2 (112-146)||(21837298-21837332)
chr2 (129-217)||(1091736-1091824)
[»] scaffold0320 (1 HSPs)
scaffold0320 (111-227)||(19511-19627)
[»] scaffold0019 (2 HSPs)
scaffold0019 (89-218)||(61430-61559)
scaffold0019 (112-218)||(60114-60220)
[»] scaffold1303 (1 HSPs)
scaffold1303 (112-218)||(1463-1569)
[»] scaffold0003 (1 HSPs)
scaffold0003 (86-218)||(49404-49536)
[»] scaffold0294 (2 HSPs)
scaffold0294 (86-218)||(5409-5541)
scaffold0294 (116-218)||(4470-4572)
[»] scaffold0302 (2 HSPs)
scaffold0302 (86-191)||(17468-17573)
scaffold0302 (112-218)||(18747-18853)
[»] scaffold2034 (2 HSPs)
scaffold2034 (111-218)||(949-1056)
scaffold2034 (88-218)||(233-363)
[»] scaffold0586 (2 HSPs)
scaffold0586 (111-206)||(6366-6461)
scaffold0586 (86-222)||(8994-9128)
[»] scaffold0632 (1 HSPs)
scaffold0632 (114-215)||(3282-3383)
[»] scaffold0059 (2 HSPs)
scaffold0059 (112-219)||(3699-3806)
scaffold0059 (112-218)||(4701-4807)
[»] scaffold0049 (2 HSPs)
scaffold0049 (131-210)||(7394-7473)
scaffold0049 (151-226)||(7882-7957)
[»] scaffold0045 (2 HSPs)
scaffold0045 (113-218)||(48334-48436)
scaffold0045 (111-164)||(49109-49162)
[»] scaffold0112 (1 HSPs)
scaffold0112 (120-227)||(37179-37286)
[»] scaffold0093 (2 HSPs)
scaffold0093 (112-218)||(2436-2543)
scaffold0093 (112-218)||(7059-7166)
[»] scaffold0186 (2 HSPs)
scaffold0186 (112-219)||(23103-23210)
scaffold0186 (86-218)||(23860-23993)
[»] scaffold0321 (1 HSPs)
scaffold0321 (111-188)||(18751-18828)
[»] scaffold0227 (1 HSPs)
scaffold0227 (112-217)||(91-196)


Alignment Details
Target: chr5 (Bit Score: 101; Significance: 3e-50; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 86 - 227
Target Start/End: Complemental strand, 18487005 - 18486864
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       ||||||||||||||||||||||||||||||| |||||| | |||| ||||||||| |||||||||||||||||||    
T  18487005 taggctaaagtgcactttcccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggccccctaagatttagcccc 18486906  T
Q  186 tttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  18486905 tttgcatctttggtccttttggtcaattttgacttattcaac 18486864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 86 - 227
Target Start/End: Original strand, 25523067 - 25523208
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25523067 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttgaccccctaagatttagcccc 25523166  T
Q  186 tttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
    |||||||||||| |||||||| |||||||||| |||||||||    
T  25523167 tttgcatctttgatccttttgatcaattttgatttattcaac 25523208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 19752935 - 19753050
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||    
T  19752935 taactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctatgatttagccccattgcatctttggtccttttggtcaa 19753034  T
Q  212 ttttgacttattcaac 227  Q
    ||||||||||||||||    
T  19753035 ttttgacttattcaac 19753050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 24332936 - 24333043
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  24332936 ttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgcatctttggtccttttggtca 24333035  T
Q  211 attttgac 218  Q
    ||||||||    
T  24333036 attttgac 24333043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 19754207 - 19754092
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||  |||    
T  19754207 taactttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttggccccctatgatttagccccattgcatctttggtccttttgaacaa 19754108  T
Q  212 ttttgacttattcaac 227  Q
    ||||||||||||||||    
T  19754107 ttttgacttattcaac 19754092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 86 - 218
Target Start/End: Original strand, 28538674 - 28538806
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        ||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||    
T  28538674 taggctaaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttagccccctaagatttagcccc 28538773  T
Q  186 tttgcatctttggtccttttggtcaattttgac 218  Q
    |||||| ||||| ||||||| ||||||||||||    
T  28538774 tttgcaactttgatcctttttgtcaattttgac 28538806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 25524158 - 25524060
Alignment:
Q  129 caattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
    ||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25524158 caattttggcctcctaagtacaaaaactataattttgaccccctaagatttagcccctttgcatctttagtccttttggtcaattttgacttattcaac 25524060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 80 - 218
Target Start/End: Complemental strand, 22940731 - 22940594
Alignment:
Q  80 ataaactaggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagattt 179  Q
    ||||||| ||||||||||||||||       ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||| ||||    
T  22940731 ataaacttggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaattttga-cccctaaaattt 22940633  T
Q  180 agcccctttgcatctttggtccttttggtcaattttgac 218  Q
    ||||||||| |||||||  ||||||||||||||||||||    
T  22940632 agccccttttcatcttttatccttttggtcaattttgac 22940594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 16650960 - 16650827
Alignment:
Q  84 actaggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcc 183  Q
    ||||||||||||||||||||       |||||||| ||||||||||||||||| |||| |||||| |||||||||||||||  ||||||||| |||||||    
T  16650960 actaggctaaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttagccccctaaggtttagcc 16650861  T
Q  184 cctttgcatctttggtccttttggtcaattttga 217  Q
    | ||||||||||||||||||||||||||||||||    
T  16650860 catttgcatctttggtccttttggtcaattttga 16650827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 2686478 - 2686363
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| |||||||||||||||||  | ||||||||||||||||| |||||||  |||||| ||||||||| | |||||||||||||||||||| ||||    
T  2686478 taacttttaaaaacttgcaattttgatctcttaagtacaaaaactataattttggtcccctatgatttagcctcattgcatctttggtccttttgatcaa 2686379  T
Q  212 ttttgacttattcaac 227  Q
    ||||||||||||||||    
T  2686378 ttttgacttattcaac 2686363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 42195156 - 42195262
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||| ||||| |||| ||||||||||| || |||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  42195156 ttaacttt-aaaaagttgcgattttggccccctatgtacaaaatctacaattttggtcccctaagatttagcccctttgcatctttggtccttttggtca 42195254  T
Q  211 attttgac 218  Q
    ||||||||    
T  42195255 attttgac 42195262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 36486565 - 36486459
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||||||||||||||| |||| |||||||||||||||||||||||  |||||||||||||| ||||||||| ||||| ||||||| |||||    
T  36486565 taacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagtccctttgcaactttgatcctttttgtcaa 36486466  T
Q  212 ttttgac 218  Q
    |||||||    
T  36486465 ttttgac 36486459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 86 - 227
Target Start/End: Complemental strand, 5778939 - 5778798
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        |||||||||||||||||||||||| ||||| ||||||| ||||| ||||||| | |||||||||||||||||||    
T  5778939 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaatttagcccccctaagatttagcccc 5778840  T
Q  186 tttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
     ||||| ||||||||||||||  |||||||||| || |||||    
T  5778839 attgcaactttggtccttttgaccaattttgacctagtcaac 5778798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 16650047 - 16650122
Alignment:
Q  143 taagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgac 218  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  16650047 taagtacaaaaactacaattttgaccctctaagatttaacccctttgcatctttggtccttttggtcaattttgac 16650122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 18485162 - 18485284
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttga-------ccccctaagatttagcccctttgcatctttggtccttt 204  Q
    ||||||| |||||||||||||||||||||| ||||||  ||||| |||||||||        ||||||||||||||||||||||||||||||| ||||||    
T  18485162 taactttaaaaaacttgcaattttggccccctaagtatcaaaacaacaattttgggttttggccccctaagatttagcccctttgcatctttgatccttt 18485261  T
Q  205 tggtcaattttgacttattcaac 227  Q
    |||| ||||||||||||||||||    
T  18485262 tggttaattttgacttattcaac 18485284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 5777923 - 5778017
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttg 206  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||| ||||||| | ||||||||||||||||||| ||||| ||||||||||||||    
T  5777923 taactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgcaactttggtccttttg 5778017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 28539897 - 28539791
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||||||||||||||| |||  |||||||||||||||||||||||  |||||||||||||| ||||||||| ||||| ||||||| | |||    
T  28539897 taacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattttggtcccctaagatttagtccctttgcaactttgatcctttttgccaa 28539798  T
Q  212 ttttgac 218  Q
    |||||||    
T  28539797 ttttgac 28539791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 36485324 - 36485430
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| |||||||| |||||||| || ||||||||||||||||| ||||||| |||||||||||||| |||||||||| ||||| || |||| |||||    
T  36485324 taactttaaaaaacttacaattttgacctcttaagtacaaaaactataattttggccccctaagatttaacccctttgcaactttgatcatttttgtcaa 36485423  T
Q  212 ttttgac 218  Q
    |||||||    
T  36485424 ttttgac 36485430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 25056458 - 25056349
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcc-cctttgcatctttggtccttttggtca 210  Q
    ||||||||||||||||||||||||| |||| ||||||  ||||||||||||||||||||||||||||||||| | ||| ||||||||||  |||| | ||    
T  25056458 taactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcctcatttacatctttggttgttttagcca 25056359  T
Q  211 attttgactt 220  Q
    ||||||||||    
T  25056358 attttgactt 25056349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 25055449 - 25055541
Alignment:
Q  125 cttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttga 217  Q
    ||||||||||||  ||| || ||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  25055449 cttgcaattttgatcccctatgtataaaaactacaattttggccccctaagatttagcccatttgcatctttggtccttttgatcaattttga 25055541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 2186798 - 2186900
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    ||||||||| |||||||||||| |   || ||||||||||||||||||| | ||||||||||||||||  ||| ||||||||||||||||||||||||||    
T  2186798 tttcaaaaagttgcaattttggtcttctatgtacaaaaactacaattttaatcccctaagatttagccattttacatctttggtccttttggtcaatttt 2186897  T
Q  216 gac 218  Q
    |||    
T  2186898 gac 2186900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 227
Target Start/End: Complemental strand, 5730934 - 5730824
Alignment:
Q  117 ttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttg 216  Q
    ||||||||||| ||||||||||||| ||||||| ||||| ||||||| | |||||||||||||| |||| ||||| ||||||| |||||| |||||||||    
T  5730934 ttcaaaaacttccaattttggccccctaagtaccaaaaccacaatttagtccccctaagatttaaccccattgcaactttggttcttttgatcaattttg 5730835  T
Q  217 acttattcaac 227  Q
    || || |||||    
T  5730834 acctagtcaac 5730824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 33160389 - 33160258
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       |||| |||||||||||||||||||| ||||| |||||| | ||||||||||||||||||| |||||||||| |||    
T  33160389 taggctaaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagtatagaaactacaattttgaccccttaagatttag-ccc 33160291  T
Q  186 tttgcatctttggtccttttggtcaattttgac 218  Q
     ||||| ||||  ||||||| | ||||||||||    
T  33160290 attgcaactttaatccttttagccaattttgac 33160258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 42196303 - 42196171
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        ||||||| ||||| |||  | ||||||||  || |||||||||||||| ||||   |||||||||||||||||     
T  42196303 taggctaaagtgcactttcccccccctaacttttaaaaagttgtgaatttggccctctatgtacaaaaactacatttttagtcccctaagatttagccca 42196204  T
Q  186 tttgcatctttggtccttttggtcaattttgac 218  Q
    |||||||||||||||||||||||||||||||||    
T  42196203 tttgcatctttggtccttttggtcaattttgac 42196171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 21835083 - 21835162
Alignment:
Q  131 attttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||| |||| || ||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||| ||||    
T  21835083 attttgaccccctatgtacaaaaactacaattttgaccccctaagatttaacccctttgcaactttgatccttttagtca 21835162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 40255775 - 40255643
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       |||| ||| ||||||||||||||||| |||| ||| |||| |||||||||||||| |||||||||||||| ||||    
T  40255775 taggctaaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaattttggccccctaagatttaacccc 40255676  T
Q  186 tttgcatctttggtccttttggtcaattttgac 218  Q
     |||||  |||  || ||||| |||||||||||    
T  40255675 attgcaattttaatctttttgatcaattttgac 40255643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 1015508 - 1015614
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||| || ||||||||||||| |  |||||||| |||||||||| ||||||||||| |||| |||||||||| ||||||||||||   |||    
T  1015508 taacttttaaaaagttacaattttggccccctgtgtacaaaacctacaattttaaccccctaagaattagtccctttgcatatttggtccttttccccaa 1015607  T
Q  212 ttttgac 218  Q
    |||||||    
T  1015608 ttttgac 1015614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 33158122 - 33158188
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatt 178  Q
    ||||||||||||||||||||||||| | || |||||||||||||||||||||||||||| |||||||    
T  33158122 taactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaattttgaccccttaagatt 33158188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 1796078 - 1796157
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgca 191  Q
    |||||||||||||||||||| ||||||| | |||||||||||||||||||||||| |||| |||| ||| ||| ||||||    
T  1796078 taactttcaaaaacttgcaactttggccacctaagtacaaaaactacaattttgatcccccaagaattaacccatttgca 1796157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 1797375 - 1797268
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||| ||| ||||||||||||||||||| |||||   ||||||||||||||||||  ||| |||||||||||||||||||| ||||| | | |||  |||    
T  1797375 ttaagttttaaaaacttgcaattttggctccttataaacaaaaactacaattttggtcccttaagatttagcccctttgcaactttgattccttttttca 1797276  T
Q  211 attttgac 218  Q
    ||||||||    
T  1797275 attttgac 1797268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 183
Target Start/End: Original strand, 7311614 - 7311685
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcc 183  Q
    ||||||||||||||||||||| |||||| |  |||||||||||||||||||||  |||||||||||||||||    
T  7311614 taactttcaaaaacttgcaatattggcctcccaagtacaaaaactacaattttagccccctaagatttagcc 7311685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 215
Target Start/End: Original strand, 18154517 - 18154619
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||| |||| ||||||| || |||||  |||| || ||||| |||    
T  18154517 ttaactttcaaaaacttacaattttgacccc-taagtacaaaaactacaattttg-ccctctaaaatttagctccattgcaaatttgatcattttgctca 18154614  T
Q  211 atttt 215  Q
    |||||    
T  18154615 atttt 18154619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 215
Target Start/End: Complemental strand, 5962647 - 5962546
Alignment:
Q  114 actttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatt 213  Q
    ||||||||||| ||| |||||||| ||| ||||||||||||||| ||||||  || ||||| |||||||   ||| |||||||||||||||||  |||||    
T  5962647 actttcaaaaatttgtaattttggtcccctaagtacaaaaactataattttagccacctaatatttagctaatttacatctttggtccttttgaccaatt 5962548  T
Q  214 tt 215  Q
    ||    
T  5962547 tt 5962546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 20216841 - 20216761
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgca 191  Q
    |||| |||||||||||||||||||| || || ||  ||||||||||||||||||| ||||| |||| ||||||| ||||||    
T  20216841 ttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaattttggccccccaagaattagcccatttgca 20216761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 34893689 - 34893739
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaatt 162  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||    
T  34893689 taactttcaaaaacttgcaattttggctccctatgtacaaaaactacaatt 34893739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 20214218 - 20214298
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgca 191  Q
    ||||||||||||||||||||||||| || |  || |||||||||||||||||||| ||||  |||| ||| ||| ||||||    
T  20214218 ttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaattttggcccctcaagaattatcccatttgca 20214298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 25524196 - 25524141
Alignment:
Q  120 aaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaag 175  Q
    ||||| ||| |||||||||||| ||||||||||||||||||||||| || ||||||    
T  25524196 aaaaatttgtaattttggccccctaagtacaaaaactacaattttggcctcctaag 25524141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 2685772 - 2685820
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaatttt 164  Q
    ||||||||||||  |||||||| ||| ||||||||||||||||||||||    
T  2685772 tttcaaaaacttataattttggtcccctaagtacaaaaactacaatttt 2685820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 2685872 - 2685912
Alignment:
Q  175 gatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    |||||||||| ||||||||||||||||||||| ||||||||    
T  2685872 gatttagcccatttgcatctttggtccttttgatcaatttt 2685912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 5730465 - 5730517
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattt 163  Q
    ||||||||||||||||||||||||||||  | ||||||| ||||| |||||||    
T  5730465 ttaactttcaaaaacttgcaattttggcttcctaagtaccaaaaccacaattt 5730517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 38834110 - 38834189
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgca 191  Q
    |||||||| ||||| |||| |||||| ||| ||| |||||||||||||||||||  | |||||||||||||  ||||||||    
T  38834110 ttaacttttaaaaagttgcgattttgaccc-ttatgtacaaaaactacaattttagctccctaagatttagttcctttgca 38834189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 5730514 - 5730555
Alignment:
Q  176 atttagcccctttgcatctttggtccttttggtcaattttga 217  Q
    |||||||||||||||| ||||||||||||||  |||||||||    
T  5730514 atttagcccctttgcaactttggtccttttgaccaattttga 5730555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 5961476 - 5961524
Alignment:
Q  158 caattttgaccccctaagatttagcccctttgcatctttggtccttttg 206  Q
    |||||||  |||||||| ||||| |||||||||||||||| ||||||||    
T  5961476 caattttagccccctaaaatttaacccctttgcatctttgatccttttg 5961524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 1e-49; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 18371448 - 18371563
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||| |||||||||||||    
T  18371448 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttggccccctaagatttagcacatttgcatctttgatccttttggtcaa 18371547  T
Q  212 ttttgacttattcaac 227  Q
    ||||||||||||||||    
T  18371548 ttttgacttattcaac 18371563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 18372530 - 18372419
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18372530 tttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctaagatttagcccctttgtatctttggtccttttggtcaatttt 18372431  T
Q  216 gacttattcaac 227  Q
    ||||||||||||    
T  18372430 gacttattcaac 18372419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 22629509 - 22629625
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||| ||||||||||||| |||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22629509 ttaattttcaaaaacttgtaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagcccctttgcatctttggtccttttggtca 22629608  T
Q  211 attttgacttattcaac 227  Q
    |||||||||||||||||    
T  22629609 attttgacttattcaac 22629625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 86 - 227
Target Start/End: Complemental strand, 22630555 - 22630414
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||||||||| |||| |    
T  22630555 taggctaaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaattttagccccctaagattcagcctc 22630456  T
Q  186 tttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  22630455 tttgtatctttggtccttttggtcaattttgacttattcaac 22630414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 86 - 226
Target Start/End: Complemental strand, 7501955 - 7501815
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||||| ||||||  ||||| ||||||||| |||| |||||| |||||||    
T  7501955 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccttaagatgtagcccc 7501856  T
Q  186 tttgcatctttggtccttttggtcaattttgacttattcaa 226  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7501855 tttgcatctttggtccttttggtcaattttgacttattcaa 7501815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 7500477 - 7500593
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||||||||||||||||||||||||  ||  |||||| | |||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  7500477 ttaactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaattttggccccctaagatttagcccctttgcatctttgatccttttggtca 7500576  T
Q  211 attttgacttattcaac 227  Q
    |||||||||||||||||    
T  7500577 attttgacttattcaac 7500593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 47369805 - 47369920
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||  ||||||||||    
T  47369805 taactttcaaaaacttgcaattttagcctcataagtacaaaaactataattttggccccttaagatttagcccctttgcatctttagttattttggtcaa 47369904  T
Q  212 ttttgacttattcaac 227  Q
    ||||||||||||||||    
T  47369905 ttttgacttattcaac 47369920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 31659647 - 31659762
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||| |||||  |||| |||||||||||||    
T  31659647 taactttcaaaaacttacaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagccccattgcaaatttgatccttttggtcaa 31659746  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  31659747 ttttgacatagtcaac 31659762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 86 - 227
Target Start/End: Complemental strand, 3227697 - 3227556
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||||| ||||||| ||||| ||||||| |  ||||||||||||||||||    
T  3227697 taggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcacccctaagatttagcccc 3227598  T
Q  186 tttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
     ||||| |||||||||||||| ||||||||||| || |||||    
T  3227597 attgcaactttggtccttttgatcaattttgacctagtcaac 3227556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 112 - 216
Target Start/End: Original strand, 21505438 - 21505542
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||| |||| |||||||||||  |  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  21505438 taactttcaaaaagttgcgattttggcccccgatatacaaaaactacaattttgaccccataagatttagcccctttgcatctttggtccttttggacaa 21505537  T
Q  212 ttttg 216  Q
    |||||    
T  21505538 ttttg 21505542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 86 - 227
Target Start/End: Original strand, 31949320 - 31949461
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        ||| |||||||||||||||||||||||||| ||||||| ||||| ||||||| | |||||||||||||||||||    
T  31949320 taggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcccc 31949419  T
Q  186 tttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
     ||||| |||||||||||||| ||||||||||| || |||||    
T  31949420 attgcaactttggtccttttgatcaattttgacctagtcaac 31949461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 42886363 - 42886257
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||| ||||||||||| |||| ||| ||||||||||||||||||  |||||||||||||||||| |||||||||||| || ||||||||||    
T  42886363 taactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaattttagccccctaagatttagcccatttgcatctttgatcattttggtcaa 42886264  T
Q  212 ttttgac 218  Q
    |||||||    
T  42886263 ttttgac 42886257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 14999223 - 14999126
Alignment:
Q  121 aaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgac 218  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  14999223 aaaacttgcaattttgaccccctaaatacaaaaactacaattttggcgccctaagatttagcccctttgcatctttgttcctttaggtcaattttgac 14999126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 31949879 - 31949764
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||||||| ||| ||| ||||| ||||||| |  |||||||||||||||||| ||||| |||||||||||||| ||||    
T  31949879 taactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcacccctaagatttagccccattgcaactttggtccttttgatcaa 31949780  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  31949779 ttttgacctagtcaac 31949764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 3227135 - 3227246
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    |||||||||||||||||||||||||| ||||||| ||||| ||||||| | |||| |||||||||||||| ||||| ||||||||||||||  |||||||    
T  3227135 tttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccttaagatttagccccattgcaactttggtccttttgaacaatttt 3227234  T
Q  216 gacttattcaac 227  Q
    ||| || |||||    
T  3227235 gacctagtcaac 3227246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 47525444 - 47525329
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||| ||||| ||||||  ||||| ||||||| | ||||||||||||||||||| ||||| ||||||||||||||  |||    
T  47525444 taactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaatttagcccccctaagatttagccccattgcaactttggtccttttgaccaa 47525345  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  47525344 ttttgacctagtcaac 47525329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 17781685 - 17781791
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||| |||||||   ||||||||||||||||||| ||||| ||||||||||||||  |||    
T  17781685 taactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccattgcaactttggtccttttgaccaa 17781784  T
Q  212 ttttgac 218  Q
    |||||||    
T  17781785 ttttgac 17781791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 127360 - 127474
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||| ||||||| | ||||||||||||||||||  ||||| ||||||||||||||  |||    
T  127360 taactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaatttag-ccccctaagatttagcccaattgcaactttggtccttttgaccaa 127458  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  127459 ttttgacctagtcaac 127474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 14998048 - 14998107
Alignment:
Q  156 tacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14998048 tacaattttggccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 14998107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 46482625 - 46482735
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    ||||||||| ||| || |||| |||| || |||||||||||| |||||| | ||||||||||||| | ||||||||| |||  |||||||||||||||||    
T  46482625 tttcaaaaatttgtaaatttgaccccctatgtacaaaaactataattttaatcccctaagatttatctcctttgcattttttatccttttggtcaatttt 46482724  T
Q  216 gacttattcaa 226  Q
    |||||||||||    
T  46482725 gacttattcaa 46482735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 17782656 - 17782558
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagccc 184  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||||| ||||||| ||||| ||||||| | ||||||||||||||||||    
T  17782656 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 17782558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 128678 - 128572
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||| ||||||||||| |||| ||||||| ||||| ||||||| | |||||||||||| |||||| ||||| |||||  ||||||   |||    
T  128678 taactttcaaaaatttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagattcagccccattgcaactttgacccttttaaccaa 128579  T
Q  212 ttttgac 218  Q
    |||||||    
T  128578 ttttgac 128572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 30439398 - 30439320
Alignment:
Q  149 caaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
    ||||||||||||||||   |||||||||||||||||||||||| ||| |||| ||||| |||||||||||||| |||||    
T  30439398 caaaaactacaattttagtcccctaagatttagcccctttgcaccttcggtcattttgctcaattttgacttagtcaac 30439320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 11662629 - 11662549
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgca 191  Q
    ||||||||||||||||||||||||| || |  || |||||||||||| ||||||| ||||| |||| ||||||||||||||    
T  11662629 ttaactttcaaaaacttgcaattttagctctctatgtacaaaaactataattttggccccccaagaattagcccctttgca 11662549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 32253458 - 32253398
Alignment:
Q  158 caattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgac 218  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||  |||||||||    
T  32253458 caattttgaccacctaagatttagtccctttgcatctttggtccttttggcaaattttgac 32253398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 770791 - 770732
Alignment:
Q  159 aattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgac 218  Q
    ||||||| |||||||| |||||||||||||||||||||| || |||||||||||||||||    
T  770791 aattttggccccctaaaatttagcccctttgcatctttgatcattttggtcaattttgac 770732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 48934980 - 48934901
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgca 191  Q
    ||||||||||||||||| ||||||| |||  ||||||||||||||| |||||||| |||| |||| ||||||| ||||||    
T  48934980 taactttcaaaaacttgtaattttgaccctctaagtacaaaaactaaaattttgatcccccaagaattagcccatttgca 48934901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 769441 - 769543
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    ||||||||||||||||||||| |  | |||||||||||| || ||||||| | |||| ||| ||| ||| |||||||||||| ||||||||  |||||||    
T  769441 tttcaaaaacttgcaattttgacatcctaagtacaaaaattataattttggctcccttagaattaacccatttgcatctttgatccttttgcccaatttt 769540  T
Q  216 gac 218  Q
    |||    
T  769541 gac 769543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 11658402 - 11658480
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttg 189  Q
    ||||||||||||||| ||||||||| ||||| || ||||||||||||||||||||  |||  |||| ||||||||||||    
T  11658402 ttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaattttggtccctcaagaattagcccctttg 11658480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 215
Target Start/End: Complemental strand, 597360 - 597260
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||| ||||||| | | | |||||||||||||||||||||||  |||||  |||||| || |||||||| |||||| ||||| ||||    
T  597360 taactttcaaaaacttgaaattttgacgcat-aagtacaaaaactacaattttga--ccctataatttagtccatttgcatccttggtcattttgatcaa 597264  T
Q  212 tttt 215  Q
    ||||    
T  597263 tttt 597260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 6618231 - 6618346
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||  ||||||||||||||||   |||||| || ||||| |||||||||||| ||||||||||| ||| | |||||  |||| || ||||| ||||    
T  6618231 taacttttcaaaacttgcaattttgattccttaaatataaaaattacaattttgactccctaagattttgcctcattgcaaatttgatcattttgatcaa 6618330  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  6618331 ttttgacctagtcaac 6618346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 34352859 - 34352757
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    |||||||||||| | ||||||| |||||||||||| |||||| ||||||| ||| |||||||||| ||   ||||| ||||  || |||||| |||||||    
T  34352859 tttcaaaaactttctattttggtcccttaagtacataaactataattttggccctctaagatttaaccttattgcaactttaatcattttggccaatttt 34352760  T
Q  216 gac 218  Q
    |||    
T  34352759 gac 34352757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 47524549 - 47524599
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaatt 162  Q
    |||||||||||||||||||||||||||||| ||||||| ||||| ||||||    
T  47524549 taactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatt 47524599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 34351518 - 34351587
Alignment:
Q  114 actttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcc 183  Q
    ||||||||||||||||||||||||| |   ||||| | ||||||||||||| ||||| ||||||||||||    
T  34351518 actttcaaaaacttgcaattttggctctccaagtatagaaactacaattttaaccccttaagatttagcc 34351587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 20163633 - 20163585
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaa 160  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||    
T  20163633 taactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 207
Target Start/End: Complemental strand, 31661086 - 31660991
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttgg 207  Q
    ||||||||||||| ||||||||||| ||| ||| |||||||||||| ||||||   ||||||| ||||| || | |||||  |||| |||||||||    
T  31661086 taactttcaaaaatttgcaattttgaccctttacgtacaaaaactataattttagtcccctaaaatttaacctcattgcaaatttgatccttttgg 31660991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 226
Target Start/End: Original strand, 43899469 - 43899584
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||||||||||||||||||||||||  |   ||| || ||||| |||||||||| | | |||| | ||||| | ||| |||||||| || |||||| ||    
T  43899469 ttaactttcaaaaacttgcaattttgatcttctaaatataaaaattacaattttggctctctaaaaattagcacatttacatctttgatctttttggcca 43899568  T
Q  211 attttgacttattcaa 226  Q
    ||||||||||| ||||    
T  43899569 attttgacttagtcaa 43899584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 43900565 - 43900451
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||| ||| ||||||||  || ||| || |||||||||| ||||| ||||| || ||||| | | |||||||||||| |||||||| ||||    
T  43900565 taacttttaaaaatttgtaattttggttccctaaatataaaaactacagttttg-cccccaaaaatttatctcatttgcatctttgatccttttgatcaa 43900467  T
Q  212 ttttgacttattcaac 227  Q
    |||| | |||||||||    
T  43900466 ttttaatttattcaac 43900451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 21508464 - 21508402
Alignment:
Q  158 caattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgactt 220  Q
    |||||||| ||| |||||||||||||  |||||||||||| || |||||||||||||| ||||    
T  21508464 caattttggccctctaagatttagccaatttgcatctttgatctttttggtcaattttaactt 21508402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 48933690 - 48933759
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagattta 180  Q
    |||| ||| |||||||||||||||||  ||||||   ||||||||||||||||||| ||| |||||||||    
T  48933690 ttaaattttaaaaacttgcaattttgatcccttataaacaaaaactacaattttgatcccttaagattta 48933759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 34174057 - 34174010
Alignment:
Q  115 ctttcaaaaacttgcaattttggccccttaagtacaaaaactacaatt 162  Q
    ||||||||| ||||||||||||||||| ||||||| ||||| ||||||    
T  34174057 ctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 34174010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 46483567 - 46483521
Alignment:
Q  159 aattttgaccccctaagatttagcccctttgcatctttggtcctttt 205  Q
    |||||||| ||||||||||||| |||||||| |||||||||| ||||    
T  46483567 aattttgatcccctaagatttaacccctttgtatctttggtcatttt 46483521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 1e-49; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 12700197 - 12700312
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  12700197 taactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgaccccctatgatttagccacattgcatctttggtccttttggtcaa 12700296  T
Q  212 ttttgacttattcaac 227  Q
    ||||||||||||||||    
T  12700297 ttttgacttattcaac 12700312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 54540892 - 54540761
Alignment:
Q  87 aggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccct 186  Q
    |||||||||||||||||       |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  54540892 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttggccccctaagatttagcccct 54540793  T
Q  187 ttgcatctttggtccttttggtcaattttgac 218  Q
    ||||| ||||| ||||||| ||||||||||||    
T  54540792 ttgcaactttgatcctttttgtcaattttgac 54540761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 86 - 227
Target Start/End: Original strand, 7758400 - 7758541
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       |||||||||||||||||||||||||| |||| ||||||||||||||||||||||  |||||||||||||| ||||    
T  7758400 taggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttttgccccctaagatttaacccc 7758499  T
Q  186 tttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
    |||| |||||||||||||||||||||||||||| || |||||    
T  7758500 tttgtatctttggtccttttggtcaattttgacctagtcaac 7758541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 86 - 218
Target Start/End: Original strand, 19984847 - 19984979
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        ||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||  ||||||||| ||||    
T  19984847 taggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaacccc 19984946  T
Q  186 tttgcatctttggtccttttggtcaattttgac 218  Q
    |||||||||||||||||||||||||||||||||    
T  19984947 tttgcatctttggtccttttggtcaattttgac 19984979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 47614209 - 47614324
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||||||| ||||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||||||| ||    
T  47614209 taactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcctctttgcatctttggtgcttttggttaa 47614308  T
Q  212 ttttgacttattcaac 227  Q
    ||||||||||||||||    
T  47614309 ttttgacttattcaac 47614324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 34019223 - 34019107
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||||||||||||||||||||| |||| || ||||||| ||||||||||||  ||||||| ||||||| | |||||||||||||||||||||||||    
T  34019223 ttaactttcaaaaacttgcaattttgaccccctaggtacaaacactacaattttggtcccctaaaatttagctcatttgcatctttggtccttttggtca 34019124  T
Q  211 attttgacttattcaac 227  Q
    ||||||| |||||||||    
T  34019123 attttgatttattcaac 34019107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 7267666 - 7267773
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| | ||||| ||||  ||||||||||||    
T  7267666 ttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccctaagatttagcctcattgcaactttaatccttttggtca 7267765  T
Q  211 attttgac 218  Q
    ||||||||    
T  7267766 attttgac 7267773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 12703577 - 12703462
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||| |||||   ||    
T  12703577 taactttcaaaaatttgtaattttggccccctaagtacaaaaactacaattttggccccctatgatttagccccattgcatctttggtcattttgaataa 12703478  T
Q  212 ttttgacttattcaac 227  Q
    ||||||||||||||||    
T  12703477 ttttgacttattcaac 12703462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 19986175 - 19986041
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggcccct--taagtacaaaaactacaattttgaccccctaagatttagcc 183  Q
    ||||||||||||||||||       |||| |||||||||||||||||||||||||||  || ||| |||||||||||||||||||| |||||||||| ||    
T  19986175 taggctaaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccctcctatgtataaaaactacaattttgaccctctaagatttaacc 19986076  T
Q  184 cctttgcatctttggtccttttggtcaattttgac 218  Q
    ||||||||||||||||| ||| |||||||||||||    
T  19986075 cctttgcatctttggtcatttcggtcaattttgac 19986041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 8875945 - 8876045
Alignment:
Q  127 tgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaa 226  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||    
T  8875945 tgcaattttagccccttatgtacaaaaactacaattttggccccctaagatttagccaatttgcatatttggtccttttagtcaattttgacttattcaa 8876044  T
Q  227 c 227  Q
    |    
T  8876045 c 8876045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 11671418 - 11671303
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||| ||||| ||| || ||||||||||  |||||||||||| |||||| ||||||| ||||||||||||||||| ||||    
T  11671418 taactttcaaaaacttgcaattttagccccctaaatataaaaactacagatttgaccccctatgatttaacccctttacatctttggtccttttgatcaa 11671319  T
Q  212 ttttgacttattcaac 227  Q
    |||||| |||||||||    
T  11671318 ttttgatttattcaac 11671303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 115 - 218
Target Start/End: Original strand, 31645000 - 31645103
Alignment:
Q  115 ctttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattt 214  Q
    ||||||||||||| ||||||||||||| ||||| |||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||  ||||||    
T  31645000 ctttcaaaaacttacaattttggccccctaagtgcaaaaactacaattttaacctcctaagatttagcccatttgcatctttggtccttttgaccaattt 31645099  T
Q  215 tgac 218  Q
    ||||    
T  31645100 tgac 31645103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 47610657 - 47610542
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||||||| ||||||| ||||| ||||||| | ||||||||||||||||||| ||||| ||||||||||||||  |||    
T  47610657 taactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgcaactttggtccttttgaccaa 47610558  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  47610557 ttttgacctagtcaac 47610542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 86 - 219
Target Start/End: Original strand, 534497 - 534630
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        ||||| ||||||||||||||||||| || | || |||||||||||||||||||| |||||||||||||||||      
T  534497 taggctaaagtgcactttttcccctctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaattttggccccctaagatttagccta 534596  T
Q  186 tttgcatctttggtccttttggtcaattttgact 219  Q
    |||||||||||||||| ||||| |||||||||||    
T  534597 tttgcatctttggtccatttggccaattttgact 534630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 218
Target Start/End: Original strand, 29931224 - 29931356
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        |||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| |||||||||||||| ||||    
T  29931224 taggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacccc 29931323  T
Q  186 tttgcatctttggtccttttggtcaattttgac 218  Q
    ||||||    | |||||||||||||||||||||    
T  29931324 tttgcaataatagtccttttggtcaattttgac 29931356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 29932775 - 29932661
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||    | |||||||||| |||    
T  29932775 taactttcaaaaacttgcaattttggcccct-aagtacaaaaactacaattttgaccccttaagatttagtccctttgcaataatagtccttttggccaa 29932677  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  29932676 ttttgacctagtcaac 29932661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 218
Target Start/End: Original strand, 29980378 - 29980510
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        |||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| |||||||||||||| ||||    
T  29980378 taggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacccc 29980477  T
Q  186 tttgcatctttggtccttttggtcaattttgac 218  Q
    ||||||    | |||||||||||||||||||||    
T  29980478 tttgcaataatagtccttttggtcaattttgac 29980510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 29981929 - 29981815
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||    | |||||||||| |||    
T  29981929 taactttcaaaaacttgcaattttggcccct-aagtacaaaaactacaattttgaccccttaagatttagtccctttgcaataatagtccttttggccaa 29981831  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  29981830 ttttgacctagtcaac 29981815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 51470000 - 51470111
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||   ||||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  51470000 tttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttaacccccctaagatttagccccattgcaactttggtccttttgatcaatttt 51470099  T
Q  216 gacttattcaac 227  Q
    ||| || |||||    
T  51470100 gacctagtcaac 51470111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 219
Target Start/End: Original strand, 54539754 - 54539886
Alignment:
Q  87 aggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccct 186  Q
    |||||||||||||||||       |||||||||||||||||||||||||  |||| ||| |||||||||||||||||||| ||||||||||||||| | |    
T  54539754 aggctaaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaattttgatcccctaagatttagctcat 54539853  T
Q  187 ttgcatctttggtccttttggtcaattttgact 219  Q
    ||||| ||||| ||||||| | |||||||||||    
T  54539854 ttgcaactttgatcctttttgccaattttgact 54539886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 47615608 - 47615540
Alignment:
Q  158 caattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaa 226  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47615608 caattttggccccctaagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaa 47615540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 8456505 - 8456616
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||||||| | |||||  |||| ||||||| |||||||||    
T  8456505 tttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggccccctaagatttagcctcattgcaaatttgatccttttagtcaatttt 8456604  T
Q  216 gacttattcaac 227  Q
    ||| || |||||    
T  8456605 gacctagtcaac 8456616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 22776915 - 22776783
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        ||||||||| ||| |||||||||||||||| || |||||||||||||||||||| |||||||||| ||||||||    
T  22776915 taggctaaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttggccccctaagaattagcccc 22776816  T
Q  186 tttgcatctttggtccttttggtcaattttgac 218  Q
    ||||||| |||||||| |||   ||||||||||    
T  22776815 tttgcatatttggtccattttcccaattttgac 22776783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 23770485 - 23770378
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||| ||| ||||| || ||||||||| |||||| |||||||||||||||||||  |||||||||||||| ||||||||||||||| |||||||||||||    
T  23770485 ttaattttaaaaaagttacaattttggtcccttatgtacaaaaactacaattttagccccctaagatttaacccctttgcatctttagtccttttggtca 23770386  T
Q  211 attttgac 218  Q
    | ||||||    
T  23770385 actttgac 23770378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 47609721 - 47609827
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||| |||||||   ||||||||||||||||||| ||||| ||||||||||||||  |||    
T  47609721 taactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccattgcaactttggtccttttgaccaa 47609820  T
Q  212 ttttgac 218  Q
    |||||||    
T  47609821 ttttgac 47609827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 81 - 218
Target Start/End: Complemental strand, 46721328 - 46721191
Alignment:
Q  81 taaactaggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagattta 180  Q
    ||||| |||||||||||||||||        ||||||| ||||| |||| |||||  |||| || |||||||||||||||||||   |||||||||||||    
T  46721328 taaacaaggctaaagtgcacttttctccccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaattttagtcccctaagattta 46721229  T
Q  181 gcccctttgcatctttggtccttttggtcaattttgac 218  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  46721228 gcccctttgcatatttggtccttctggtcaattttgac 46721191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 217
Target Start/End: Original strand, 46719964 - 46720070
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||| ||||| |||| ||||||||||| || ||| |||||||||||||||   || |||||||||||||| ||||||| |||||||||||||||||    
T  46719964 ttaacttttaaaaagttgcgattttggccccctatgtataaaaactacaattttagtcctctaagatttagcccatttgcatatttggtccttttggtca 46720063  T
Q  211 attttga 217  Q
    |||||||    
T  46720064 attttga 46720070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 55192073 - 55191967
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||  |||| ||| ||||||||||  |||| || |||| ||||    
T  55192073 ttaactttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttggcccctcaagaattaacccctttgcaattttgatcatttttgtca 55191974  T
Q  211 attttga 217  Q
    |||||||    
T  55191973 attttga 55191967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 51470532 - 51470417
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||| |  ||| ||||||| ||||| ||||||| |  ||||||||||||||| || ||||| |||||||||||||| ||||    
T  51470532 taactttcaaaaacttgcaatttagatcccctaagtaccaaaaccacaatttagcacccctaagatttagctccattgcaactttggtccttttgatcaa 51470433  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  51470432 ttttgacctagtcaac 51470417  T

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Target: chr3; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 7268904 - 7268798
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||||| | |||||| | |||||||||||||| || |||||||||||| ||| |||||  |||  |||||||| ||||    
T  7268904 taactttcaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcctcctaagatttagtcccattgcaattttaatccttttgatcaa 7268805  T
Q  212 ttttgac 218  Q
    |||||||    
T  7268804 ttttgac 7268798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 49216275 - 49216377
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    ||||||||| ||||||||||| |||| || ||||||||||||||||| || |||| ||||||||||| | |||||||||||| || |||||| |||||||    
T  49216275 tttcaaaaagttgcaattttgaccccctatgtacaaaaactacaattatgtccccttaagatttagctcatttgcatctttgatcattttggccaatttt 49216374  T
Q  216 gac 218  Q
    |||    
T  49216375 gac 49216377  T

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Target: chr3; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 112 - 184
Target Start/End: Complemental strand, 535859 - 535787
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagccc 184  Q
    |||||||||||||||||||||||||| ||||||||||  ||||||| |||||| |||||||||||||||||||    
T  535859 taactttcaaaaacttgcaattttggtcccttaagtattaaaactataattttcaccccctaagatttagccc 535787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 11670407 - 11670523
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||| ||||||||| |||||||||| | ||| |||||| |||||||| |||||||  ||| || ||||||| ||| |||||| ||| ||||||||| |||    
T  11670407 ttaattttcaaaaatttgcaattttagtcccctaagtataaaaactataattttggtcccttatgatttagtcccattgcattttttgtccttttgatca 11670506  T
Q  211 attttgacttattcaac 227  Q
    |||||||||||||||||    
T  11670507 attttgacttattcaac 11670523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 40426857 - 40426749
Alignment:
Q  111 ttaactttcaaaaacttgcaatttt-ggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtc 209  Q
    |||||||| ||||| |||||| ||| |||||||||  |||||||| |||||||||| ||||||| |||||||| ||||||  |||||||||||||||||     
T  40426857 ttaactttaaaaaagttgcaaatttcggccccttatatacaaaaattacaattttggccccctatgatttagctcctttgtgtctttggtccttttggtt 40426758  T
Q  210 aattttgac 218  Q
    |||||||||    
T  40426757 aattttgac 40426749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 6249633 - 6249747
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||| | ||| |||||||||| | | |||||  |||| |||||||| ||||    
T  6249633 taactttcaaaaacttgcaattttaatcccttaagtacaaaaactacaatttt-atcccttaagatttagtctcattgcaaatttgatccttttgatcaa 6249731  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  6249732 ttttgacctagtcaac 6249747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 23769880 - 23769986
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||||||||| || ||||||||||   ||  || || |||||||||||||||||||||| |||||||| || | |||||||||||||||||||||||||    
T  23769880 ttaactttcaacaagttgcaattttaatcctctatgtgcaaaaactacaattttgacccc-taagatttcgctcatttgcatctttggtccttttggtca 23769978  T
Q  211 attttgac 218  Q
    ||||||||    
T  23769979 attttgac 23769986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 24516484 - 24516562
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgc 190  Q
    ||||||| ||||||||||||||||||| || |||||| |||||||||||||||| |||| ||||||||||| |||||||    
T  24516484 taactttaaaaaacttgcaattttggcaccctaagtataaaaactacaattttggccccttaagatttagctcctttgc 24516562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 52840681 - 52840575
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||||| || ||| ||  ||||| ||||||||| ||||||||||||||||||| |||||  |||  || ||||||| ||    
T  52840681 taactttcaaaaacttgcaattttggctccctaattatcaaaacaacaattttgtccccctaagatttagccccattgcaaattttatcattttggttaa 52840582  T
Q  212 ttttgac 218  Q
    |||||||    
T  52840581 ttttgac 52840575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 54987080 - 54986978
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    ||||||||| |||| ||||| | ||| || ||| |||||||| ||||||||||| |||||||||||| |||||||||||||| || |||||| |||||||    
T  54987080 tttcaaaaagttgcgattttagtcccctatgtataaaaactataattttgaccctctaagatttagctcctttgcatctttgatcattttggccaatttt 54986981  T
Q  216 gac 218  Q
    |||    
T  54986980 gac 54986978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 115 - 219
Target Start/End: Complemental strand, 5029757 - 5029653
Alignment:
Q  115 ctttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattt 214  Q
    ||||||||| ||||||||||||||| | ||||||| ||||| ||||||||  |||||||||| |||||||| |||| | ||| ||||||||| || ||||    
T  5029757 ctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttttcccccctaagaattagccccattgcttatttcgtccttttgctctattt 5029658  T
Q  215 tgact 219  Q
    |||||    
T  5029657 tgact 5029653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 52105709 - 52105636
Alignment:
Q  147 tacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgactt 220  Q
    ||||||| |||||||||| || |||||| |||||||| |||| |||||||||||||||||| ||||||||||||    
T  52105709 tacaaaagctacaattttaactccctaaaatttagcctctttacatctttggtccttttggccaattttgactt 52105636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 6171299 - 6171213
Alignment:
Q  131 attttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgact 219  Q
    |||||||||||| | |||||||||||| ||||||||||| ||||||||||  |  |||||||||||||||||||||| |||||||||||    
T  6171299 attttggcccct-atgtacaaaaactataattttgaccctctaagatttaaaca-tttgcatctttggtccttttggccaattttgact 6171213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 51037558 - 51037638
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgca 191  Q
    |||||||||||||| ||||||||||| |||  || | |||||||||||||||||  |||||||||| ||||||||||||||    
T  51037558 ttaactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaattttagccccctaagaattagcccctttgca 51037638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 4271463 - 4271570
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||||||||| ||| |||||||  | ||||| || |||||||||||||||  |  | ||||||||||||| |||||| ||||| ||||||| ||||    
T  4271463 ttaactttcaaaaatttgtaattttgatctcttaaatataaaaactacaattttagcatcttaagatttagcccatttgcaactttgatcctttttgtca 4271562  T
Q  211 attttgac 218  Q
    ||||||||    
T  4271563 attttgac 4271570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 6170296 - 6170348
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaatttt 164  Q
    |||||||||||||||||||||||||  |||||||||||||||| |||||||||    
T  6170296 taactttcaaaaacttgcaattttgatcccttaagtacaaaaattacaatttt 6170348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 51347291 - 51347407
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||| ||| ||||| |||||||||||| ||  || | |||||||  |||||||||||||||||||||||| ||| |||||| ||||| || ||||| |||    
T  51347291 ttaagtttgaaaaagttgcaattttggtcctctatgaacaaaaatgacaattttgaccccctaagatttaacccgtttgcaactttgatcattttgatca 51347390  T
Q  211 attttgacttattcaac 227  Q
    || ||||| || |||||    
T  51347391 atgttgacctagtcaac 51347407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 52104503 - 52104604
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||| ||| |||||||| ||  || |||||||||||| ||||||| || ||||||||||| | | ||||||||||||||| |||||  |||    
T  52104503 taactttcaaaaagttgtaattttggtcc--tatgtacaaaaactataattttggccacctaagatttaactcatttgcatctttggtcattttgaccaa 52104600  T
Q  212 tttt 215  Q
    ||||    
T  52104601 tttt 52104604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 52839061 - 52839167
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||| |||||| ||| ||||||| |||  ||||||| ||||| ||||||||  ||| |||| |||||||||| |||||  |||  |||||||||||||    
T  52839061 taacttccaaaaatttgtaattttgaccctctaagtaccaaaacaacaattttacccctctaaaatttagccccattgcaaatttcatccttttggtcaa 52839160  T
Q  212 ttttgac 218  Q
    |||||||    
T  52839161 ttttgac 52839167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 217
Target Start/End: Original strand, 18442655 - 18442760
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||  |||| |||||||||||  | |||  ||||||||||||||| ||||||| | ||||||||| |||||  ||  |||||||||| |||    
T  18442655 taactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccccctatgttttagccccattgcagtttcagtccttttgggcaa 18442754  T
Q  212 ttttga 217  Q
    ||||||    
T  18442755 ttttga 18442760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 217
Target Start/End: Original strand, 19487729 - 19487834
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||  |||| |||||||||||  | |||  ||||||||||||||| ||||||| | ||||||||| |||||  ||  |||||||||| |||    
T  19487729 taactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccccctatgttttagccccattgcagtttcagtccttttgggcaa 19487828  T
Q  212 ttttga 217  Q
    ||||||    
T  19487829 ttttga 19487834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 49757236 - 49757301
Alignment:
Q  22 tattaatctcaaaactcgtctagnnnnnnnttctcaaaattgacaaagcttatttcatataaacta 87  Q
    |||||||||||||||||||||||        ||||||||||| |||||||||||||||||||||||    
T  49757236 tattaatctcaaaactcgtctagaaaaaaaatctcaaaattgtcaaagcttatttcatataaacta 49757301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 191
Target Start/End: Complemental strand, 51038893 - 51038788
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       |||||||| ||||| ||||||||||| |||| || | ||||||||||||||||||  ||| ||||| ||  ||||    
T  51038893 taggctaaagtgcacttttccacccttaacttttaaaaagttgcaattttgaccccctatgaacaaaaactacaattttggtcccttaagaattgtcccc 51038794  T
Q  186 tttgca 191  Q
    ||||||    
T  51038793 tttgca 51038788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 47615651 - 47615591
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaag 146  Q
    ||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||    
T  47615651 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaag 47615591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 53897173 - 53897231
Alignment:
Q  159 aattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttga 217  Q
    ||||||| |||||||||  ||||||| |||||| ||||| |||||||||||||||||||    
T  53897173 aattttggccccctaagtattagcccatttgcaactttgatccttttggtcaattttga 53897231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 53901457 - 53901403
Alignment:
Q  120 aaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaa 174  Q
    ||||| ||||||||||| | |||||||||||||||||||||| ||| ||||||||    
T  53901457 aaaaagttgcaattttgactccttaagtacaaaaactacaatgttggccccctaa 53901403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 219
Target Start/End: Original strand, 5001227 - 5001336
Alignment:
Q  115 ctttcaaaaacttgcaattttggccccttaagtacaaaaactacaattt-----tgaccccctaagatttagcccctttgcatctttggtccttttggtc 209  Q
    ||||||||| ||||||||||||||||| ||||||| ||||| |||||||        |||||||||| |||||||| |||| | ||| ||||||||| ||    
T  5001227 ctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttccccccccccccctaagaattagccccattgcttatttcgtccttttgctc 5001326  T
Q  210 aattttgact 219  Q
     |||||||||    
T  5001327 tattttgact 5001336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 217
Target Start/End: Original strand, 28262216 - 28262321
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||  |||| |||||||||||  | |||  ||||| ||||||||| ||||||| | ||||||||| |||||  ||  |||||||||| |||    
T  28262216 taactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccccattgcagtttcagtccttttgggcaa 28262315  T
Q  212 ttttga 217  Q
    ||||||    
T  28262316 ttttga 28262321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 46493038 - 46492979
Alignment:
Q  168 cccctaagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
    |||||||| |||||||||  |||| ||||| |||||||||||||||||||| || |||||    
T  46493038 cccctaagttttagcccccctgcaactttgatccttttggtcaattttgacctagtcaac 46492979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 28263214 - 28263083
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        ||||||| ||||  |||| |||||||||||  | |||  ||||| ||||||||| ||||||| | |||||||||    
T  28263214 taggctaaagtgcacttttccccccctaacttttaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagcccc 28263115  T
Q  186 tttgcatctttggtccttttggtcaattttga 217  Q
     |||||  ||  |||||||||| |||||||||    
T  28263114 attgcagtttcagtccttttgggcaattttga 28263083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 52276331 - 52276433
Alignment:
Q  115 ctttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattt 214  Q
    |||||||||  |||| |||||||||||  | |||  ||||| ||||||||| ||||||| | ||||||||| |||||  ||  |||||||||| ||||||    
T  52276331 ctttcaaaacgttgcgattttggccccccatgtatgaaaacaacaattttggccccctatgttttagccccattgcagtttcagtccttttgggcaattt 52276430  T
Q  215 tga 217  Q
    |||    
T  52276431 tga 52276433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 217
Target Start/End: Complemental strand, 52281621 - 52281519
Alignment:
Q  115 ctttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattt 214  Q
    |||||||||  |||| |||||||||||  | |||  ||||| ||||||||| ||||||| | ||||||||| |||||  ||  |||||||||| ||||||    
T  52281621 ctttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccccattgcagtttcagtccttttgggcaattt 52281522  T
Q  215 tga 217  Q
    |||    
T  52281521 tga 52281519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 55191544 - 55191627
Alignment:
Q  121 aaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccct-aagatttagcccctttgcatctttggtcctttt 205  Q
    |||||||||||||||| | || ||| ||||||||||| ||||||  ||| || |||||||||||||||||||  |||| |||||||    
T  55191544 aaaacttgcaattttgacaccctaaatacaaaaactataatttt--ccctctcaagatttagcccctttgcaattttgatcctttt 55191627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 784986 - 784917
Alignment:
Q  150 aaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgact 219  Q
    ||||||||||||||| | || |||| ||||| || ||||||||||||| || |||||  |||||||||||    
T  784986 aaaaactacaattttaatcctctaaaatttaacctctttgcatctttgatcattttgaccaattttgact 784917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 217
Target Start/End: Complemental strand, 18456140 - 18456035
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||  |||| |||||||||||  | |||  ||||| ||||||||| ||||||| | ||||||||| ||| |  ||  |||||||||| |||    
T  18456140 taactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccccattgtagtttcagtccttttgggcaa 18456041  T
Q  212 ttttga 217  Q
    ||||||    
T  18456040 ttttga 18456035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 6250634 - 6250547
Alignment:
Q  131 attttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgact 219  Q
    ||||||| ||| || |||||||| ||| ||||||  ||| |||||||||| ||  |||||||||||| ||||||||  |||||||||||    
T  6250634 attttggtcccctatgtacaaaacctaaaattttagccctctaagatttaacca-tttgcatctttgatccttttgaccaattttgact 6250547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 22775816 - 22775876
Alignment:
Q  158 caattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgac 218  Q
    |||||||| ||||| |||| ||||||||||||||  ||||||||||||   ||||||||||    
T  22775816 caattttggccccccaagaattagcccctttgcagatttggtcctttttcccaattttgac 22775876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 53614842 - 53614921
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgca 191  Q
    ||||||||||||||||| ||||||| | ||  ||  || |||||||||||||||| ||||| |||| ||||||| ||||||    
T  53614842 ttaactttcaaaaacttacaattttagtcctctatatataaaaactacaattttggccccc-aagaattagcccatttgca 53614921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 8e-48; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 12129646 - 12129762
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||| |||    
T  12129646 ttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaattttgaccccttaagatttagcccatttgcatctttggtcattttgatca 12129745  T
Q  211 attttgacttattcaac 227  Q
    |||||||||||||||||    
T  12129746 attttgacttattcaac 12129762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 1835209 - 1835071
Alignment:
Q  82 aaactaggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttag 181  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||| |||| ||||||  |||||||||||||||||||||||||||||||    
T  1835209 aaactaggctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttag 1835110  T
Q  182 cccctttgcatctttggtccttttggtcaattttgactt 220  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  1835109 cccctttgcatctttggtccttttagccaattttgactt 1835071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 1290301 - 1290169
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       ||||||||||||| ||||||||||||||||  ||||||||||||||||||||||  |||||||||||||| ||||    
T  1290301 taggctaaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaattttagccccctaagatttaacccc 1290202  T
Q  186 tttgcatctttggtccttttggtcaattttgac 218  Q
    |||||||||||||||||||||||||||||||||    
T  1290201 tttgcatctttggtccttttggtcaattttgac 1290169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 8155760 - 8155876
Alignment:
Q  112 taactttcaaaaacttgcaattttggc-cccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||||||||||||||||||| || ||| ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| ||| |||||||||    
T  8155760 taactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaattttggccccctaagatttagccgctttgcatctttagtcattttggtca 8155859  T
Q  211 attttgacttattcaac 227  Q
    | |||||||||||||||    
T  8155860 actttgacttattcaac 8155876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 86 - 227
Target Start/End: Complemental strand, 25685925 - 25685784
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||||| ||||||| ||||| ||||||| |||||||||||||||||||||    
T  25685925 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagaccccctaagatttagcccc 25685826  T
Q  186 tttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
     ||||| ||||||||||||||  |||||||||| || |||||    
T  25685825 attgcaactttggtccttttgaccaattttgacctagtcaac 25685784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 227
Target Start/End: Complemental strand, 10471489 - 10471350
Alignment:
Q  88 ggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctt 187  Q
    ||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| | ||||||||||||||||||| |    
T  10471489 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 10471390  T
Q  188 tgcatctttggtccttttggtcaattttgacttattcaac 227  Q
    |||| ||||||||||||||  |||||||||| || |||||    
T  10471389 tgcaactttggtccttttgaccaattttgacctagtcaac 10471350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 31601062 - 31600956
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||| |||||| ||||| ||||||| |||||    
T  31601062 taacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgaccccttaagatttagcccatttgcaactttgatcctttttgtcaa 31600963  T
Q  212 ttttgac 218  Q
    |||||||    
T  31600962 ttttgac 31600956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 49308104 - 49307999
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||| ||||||  |||||||||||||||| ||||||    
T  49308104 taactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttg-ccccctatgattttgcccctgcgcatctttggtcctttgggtcaa 49308006  T
Q  212 ttttgac 218  Q
    |||||||    
T  49308005 ttttgac 49307999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 19750652 - 19750546
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||| |||||  |||| ||||||||||||     
T  19750652 taacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattgcaaatttgatccttttggtcac 19750553  T
Q  212 ttttgac 218  Q
    |||||||    
T  19750552 ttttgac 19750546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 19789154 - 19789260
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||| |||||  |||| ||||||||||||     
T  19789154 taacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattgcaaatttgatccttttggtcac 19789253  T
Q  212 ttttgac 218  Q
    |||||||    
T  19789254 ttttgac 19789260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 31599813 - 31599919
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||||||||||||||| |||| |||||||||||||||||||||||  |||||||||||||||||||||||| ||||| ||||||| | |||    
T  31599813 taacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagcccctttgcaactttgatcctttttgccaa 31599912  T
Q  212 ttttgac 218  Q
    |||||||    
T  31599913 ttttgac 31599919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 1834143 - 1834250
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgacccc-ctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||||| |||||||| |||||||| |||| || ||| |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||    
T  1834143 taactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggcccccctaagatttagcccatttgcatctttggtccttttggtca 1834242  T
Q  211 attttgac 218  Q
    ||||||||    
T  1834243 attttgac 1834250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 5525383 - 5525489
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||| ||||||| | ||||||||||||||||||| ||||| ||||||||||||||  |||    
T  5525383 taactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgcaactttggtccttttgaccaa 5525482  T
Q  212 ttttgac 218  Q
    |||||||    
T  5525483 ttttgac 5525489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 8758915 - 8758809
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||| ||||||||||| || |||||  |||  ||||||||||||    
T  8758915 ttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagctccattgcaattttaatccttttggtca 8758816  T
Q  211 attttga 217  Q
    |||||||    
T  8758815 attttga 8758809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 10448333 - 10448231
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    ||||||||| |||| ||||| ||||| || |||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||| |||||||    
T  10448333 tttcaaaaagttgcgattttagccccctatgtacaaaaactacaattttggccctctaagatatagcccctttgcatctttggtccttttggccaatttt 10448234  T
Q  216 gac 218  Q
    |||    
T  10448233 gac 10448231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 10470545 - 10470676
Alignment:
Q  87 aggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccct 186  Q
    |||||||||||||||||       |||||||||||||||||||||||||| |||  ||||||| ||||  ||||||| | |||||||||||||||||||     
T  10470545 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccctctaagtaccaaaatcacaatttagcccccctaagatttagcccca 10470644  T
Q  187 ttgcatctttggtccttttggtcaattttgac 218  Q
    ||||| |||||||||||||| |||||||||||    
T  10470645 ttgcaactttggtccttttgatcaattttgac 10470676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 13509436 - 13509330
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||| ||||||||||||||||  |||||  |||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||| |||    
T  13509436 taacttttaaaaaattgcaattttggccccccaagtatgaaaactacaattttgatcccctaagatttagcccctttgcacctttgctccttttggccaa 13509337  T
Q  212 ttttgac 218  Q
    |||||||    
T  13509336 ttttgac 13509330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 25684958 - 25685064
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||| |||  ||||||| ||||| ||||||| | ||||||||||||||||||| ||||| |||||||||||||| ||||    
T  25684958 taactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagcccccctaagatttagccccattgcaactttggtccttttgatcaa 25685057  T
Q  212 ttttgac 218  Q
    |||||||    
T  25685058 ttttgac 25685064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 10447030 - 10447126
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttgg 207  Q
    |||| ||||||||| |||||||||| ||||| || |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  10447030 ttaagtttcaaaaagttgcaattttagccccctatgtacaaaaaccacaattttacccccctaagatttagcccctttgcatctttggtccttttgg 10447126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 17383016 - 17383124
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||| ||| ||||||||||    | ||||||| ||||||    
T  17383016 taactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccccaagaattatcccctttgcaatagtagtcctttaggtcaa 17383115  T
Q  212 ttttgactt 220  Q
    |||||||||    
T  17383116 ttttgactt 17383124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 5526203 - 5526088
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||||||| ||||||  ||||| ||||||| | ||||||||||||||||||| |||||  |||||||||||||  |||    
T  5526203 taactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaatttagcccccctaagatttagccccattgcaattttggtccttttgaccaa 5526104  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  5526103 ttttgacctagtcaac 5526088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 52491685 - 52491578
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||||||||||||||||||||||||| ||  ||| |||| |||||||||||||| |||||||| |||||||||| ||||| ||||  ||||||||||||    
T  52491685 ttaactttcaaaaacttgcaattttggtcctctaaatacagaaactacaattttggccccctaaaatttagccccattgcaactttaatccttttggtca 52491586  T
Q  211 attttgac 218  Q
    ||||||||    
T  52491585 attttgac 52491578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 13386609 - 13386503
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||| ||||||| | ||||||||||| ||||||| ||||| ||||||||||||||  |||    
T  13386609 taactttcaaaaacttgcaattttgaccccataagtaccaaaaccacaatttagcccccctaagatctagccccattgcaactttggtccttttgaccaa 13386510  T
Q  212 ttttgac 218  Q
    |||||||    
T  13386509 ttttgac 13386503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 37728642 - 37728536
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||| |||||||||||||| | || ||||||||||||||||||||||||  |||||||||||  ||||||||||||| ||||||| |||||    
T  37728642 taacttttaaaaagttgcaattttggcctcctatgtacaaaaactacaattttgaccctttaagatttagcttctttgcatctttgatccttttagtcaa 37728543  T
Q  212 ttttgac 218  Q
    |||||||    
T  37728542 ttttgac 37728536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 13386010 - 13386155
Alignment:
Q  84 actaggctaaagtgcactttnnnnnnnttaactttcaaaaa-cttgcaattttggccccttaagtacaaaaactacaattt-tgaccccctaagatttag 181  Q
    ||||||||||||||||||||        ||||||||||||| ||||||||||||||||| ||||||| ||||| ||||||| |  |||||||||||||||    
T  13386010 actaggctaaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaatttatccccccctaagatttag 13386109  T
Q  182 cccctttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
    || | ||||| |||||||||||||| ||||||||||| || |||||    
T  13386110 cctcattgcaactttggtccttttgatcaattttgacctagtcaac 13386155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 17388288 - 17388180
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||| |||| ||||||||||| ||    | ||||||| ||||||    
T  17388288 taactttcaaaaacttgcaattttggtcccttaagtacataaactacaattttggccccccaagaattagcccctttacaatagtagtcctttaggtcaa 17388189  T
Q  212 ttttgactt 220  Q
    |||||||||    
T  17388188 ttttgactt 17388180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 8757697 - 8757804
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||||||||||||||| ||||||| ||||| |||||||| ||||||||||||||  ||| |||||||||||||| |||||  |||  ||||||||||||    
T  8757697 ttaactttcaaaaacttacaattttagccccctaagtacagaaactacaattttggacccttaagatttagccccattgcaattttaatccttttggtca 8757796  T
Q  211 attttgac 218  Q
    ||||||||    
T  8757797 attttgac 8757804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 35935611 - 35935504
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||| ||||| |||||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||| | ||||| ||||  ||||||||| ||    
T  35935611 ttaacttttaaaaatttgcaattttagccccctaagtacataaactacaattttggccccctaagatttagcctcattgcaactttaatccttttggcca 35935512  T
Q  211 attttgac 218  Q
    ||||||||    
T  35935511 attttgac 35935504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 48780246 - 48780366
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        ||||||| ||||||||||||||||| |||| ||||||| ||||| ||||||| | |||||||||||||||||||    
T  48780246 taggctaaagtgcacttttccccccctaacttttaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagcccc 48780345  T
Q  186 tttgcatctttggtccttttg 206  Q
     ||||| ||||||||||||||    
T  48780346 attgcaactttggtccttttg 48780366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 50909742 - 50909643
Alignment:
Q  120 aaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccct-aagatttagcccctttgcatctttggtccttttggtcaattttgac 218  Q
    ||||| |||| |||||| | || || ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  50909742 aaaaagttgcgattttgactccctatgtataaaaactacaattttgacccccttaagatttagcccctttgcatctttggtccttttgatcaattttgac 50909643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 113 - 218
Target Start/End: Original strand, 49306799 - 49306903
Alignment:
Q  113 aactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaat 212  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||| |||  || ||||||| |  ||||||||||||||||||||  |||||    
T  49306799 aactttcaaaaacttgcaattttggccatttaagtacaaaaactacaattttg-cccaatatgatttagtcattttgcatctttggtcctttttatcaat 49306897  T
Q  213 tttgac 218  Q
    ||||||    
T  49306898 tttgac 49306903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 1963194 - 1963299
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       |||||||||||||| |||||||||||||| | || |||||||||||||||||||  |||||||||| ||||||||    
T  1963194 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaattttagccccctaagaattagcccc 1963293  T
Q  186 tttgca 191  Q
    ||||||    
T  1963294 tttgca 1963299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 21539149 - 21539065
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctt 195  Q
    |||| ||| |||||||||||||||||||| | |||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  21539149 ttaatttttaaaaacttgcaattttggcctcctaagtgtaaaaactacaattttgaccccctaagatttagctcctttgcatctt 21539065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 184
Target Start/End: Complemental strand, 26421699 - 26421627
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagccc 184  Q
    ||||||||||||||||||||||||| || | |||||||||||||||||||||||||||| |||||||||||||    
T  26421699 taactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaattttgaccccttaagatttagccc 26421627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 1289120 - 1289227
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||||||| | ||| |||||||  ||  |||||| |||||||||||||||  || | ||||||||| |||| ||||||||||||||||||||||||    
T  1289120 ttaactttcaaatatttgtaattttgatcctctaagtataaaaactacaattttagcctcttaagatttaacccccttgcatctttggtccttttggtca 1289219  T
Q  211 attttgac 218  Q
    ||||||||    
T  1289220 attttgac 1289227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 21178020 - 21178127
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||| ||| |||||||||||  ||| || | ||||||||||||||||||||||||||| ||||||||| |||||| ||||| || |||| | |||    
T  21178020 taactttcataaagttgcaattttgatcccctatgaacaaaaactacaattttgaccccctaaaatttagcccttttgcaactttgatcatttttgccaa 21178119  T
Q  212 ttttgact 219  Q
    ||||||||    
T  21178120 ttttgact 21178127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 35934366 - 35934472
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||| |||||||| ||| |||||| | ||| || ||||||| |||| |||||||||||||| ||||| ||||  | |||||||||||    
T  35934366 taactttcaaaaacttgtaattttggtcccctaagtaaagaaattataattttggccccttaagatttagccccattgcaactttaattcttttggtcaa 35934465  T
Q  212 ttttgac 218  Q
    |||||||    
T  35934466 ttttgac 35934472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 37727720 - 37727826
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||| ||||| ||| ||||||||| | |||  |||||||||||||||||| ||||| |||||||||| | ||||| |||||||||| |||| ||||    
T  37727720 ttaacttttaaaaagttgtaattttggctc-ttatatacaaaaactacaattttaaccccttaagatttagtctctttgtatctttggtcattttagtca 37727818  T
Q  211 attttgac 218  Q
    ||||||||    
T  37727819 attttgac 37727826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 46638803 - 46638696
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||||||||| ||| |||||||  ||| || | ||||||| |||||||||  ||||||||||||||| ||||||||| |||| ||| ||||| |||    
T  46638803 ttaactttcaaaaagttggaattttgatcccctatgaacaaaaattacaattttagccccctaagatttagtccctttgcaactttagtctttttgatca 46638704  T
Q  211 attttgac 218  Q
    ||||||||    
T  46638703 attttgac 46638696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 48781122 - 48781008
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||| |||||||||||| ||| ||||||| ||||| ||||||| | |||||||| |||||||||| ||||| |||||||| |||||   ||    
T  48781122 taactttcaaaaatttgcaattttggtccc-taagtactaaaaccacaatttagcccccctaaaatttagccccattgcaactttggtcattttgacaaa 48781024  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  48781023 ttttgacctagtcaac 48781008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 3928935 - 3928827
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||  |||| ||||||||||| || |||  ||||| ||||||||| ||| ||| | |||||||||||||||| ||  |||||||| | |||    
T  3928935 taactttcaaaacgttgcgattttggccccctatgtatgaaaaccacaattttggccctctatgttttagcccctttgcattttcagtccttttaggcaa 3928836  T
Q  212 ttttgactt 220  Q
    |||||||||    
T  3928835 ttttgactt 3928827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 116 - 215
Target Start/End: Original strand, 33296251 - 33296350
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    ||||||||||||  |||||||| | | |||||| |||||||| |||||||  ||||||  ||||||| | |||||||||||| || ||||||||||||||    
T  33296251 tttcaaaaacttataattttggtctcctaagtataaaaactataattttggtcccctataatttagctcatttgcatctttgatcattttggtcaatttt 33296350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 27258038 - 27257960
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttg 189  Q
    |||||||| ||||| ||||||||||| |||  ||  |||||||||| ||||||| ||||| ||||||||||||||||||    
T  27258038 ttaacttttaaaaagttgcaattttgaccctctatatacaaaaactccaattttaaccccttaagatttagcccctttg 27257960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 190
Target Start/End: Complemental strand, 1964542 - 1964440
Alignment:
Q  88 ggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctt 187  Q
    ||||||||||||||||       |||||||| ||||| || ||||||||||||| || | ||||||||||||||||||  ||| ||||| ||| ||||||    
T  1964542 ggctaaagtgcacttttccacccttaacttttaaaaagttacaattttggccccctatgaacaaaaactacaattttggtcccttaagaattatcccctt 1964443  T
Q  188 tgc 190  Q
    |||    
T  1964442 tgc 1964440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 219
Target Start/End: Original strand, 14868916 - 14869019
Alignment:
Q  115 ctttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattt 214  Q
    ||||||||| ||||||||||||||||  ||||||  ||||| |||| |||  |||||||||| |||||||| |||| | ||| ||||||||| || ||||    
T  14868916 ctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaa-tttccccccctaagaattagccccattgcttatttcgtccttttgctctattt 14869014  T
Q  215 tgact 219  Q
    |||||    
T  14869015 tgact 14869019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 219
Target Start/End: Complemental strand, 14877018 - 14876915
Alignment:
Q  115 ctttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattt 214  Q
    ||||||||| ||||||||||||||||  ||||||  ||||| |||| |||  |||||||||| |||||||| |||| | ||| ||||||||| || ||||    
T  14877018 ctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaa-tttccccccctaagaattagccccattgcttatttcgtccttttgctctattt 14876920  T
Q  215 tgact 219  Q
    |||||    
T  14876919 tgact 14876915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 33310166 - 33310087
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgca 191  Q
    ||||||| ||||||||| |||||| || || ||| ||||||||||| ||||||| ||| ||| ||||||||| |||||||    
T  33310166 taacttttaaaaacttgtaattttagctccctaaatacaaaaactataattttggccctctatgatttagcctctttgca 33310087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 50909304 - 50909388
Alignment:
Q  120 aaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtcctttt 205  Q
    ||||| ||||||||||| || | ||  || ||||||||||||||| ||| ||||||||||||  | ||||||||||||||||||||    
T  50909304 aaaaagttgcaattttgacctcctatatataaaaactacaattttaacctcctaagatttag-tcatttgcatctttggtcctttt 50909388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 3927690 - 3927798
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||  |||| |||||||||||  | |||  |||||||||||||||  || ||| | |||||||| ||||||| ||  |||||||||| |||    
T  3927690 taacttttaaaatgttgcgattttggccccccatgtatgaaaactacaattttggtcctctatgttttagcccatttgcattttcagtccttttgggcaa 3927789  T
Q  212 ttttgactt 220  Q
    |||||||||    
T  3927790 ttttgactt 3927798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 54107949 - 54107986
Alignment:
Q  178 ttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  54107949 ttagcccctttgcatctttggtctttttggccaatttt 54107986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 54110705 - 54110608
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtc 209  Q
    ||||||| ||||| ||||||||||| || |  | ||||||||| || ||||||  |||||||| ||||||| |  ||||||||||||| ||| |||||    
T  54110705 taactttaaaaaatttgcaattttgacctccaatgtacaaaaattataattttagccccctaaaatttagctcaattgcatctttggttcttctggtc 54110608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 55603609 - 55603549
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccc 171  Q
    |||||||||||||||||||||||||   ||| |  ||||||||||||| |||||| |||||    
T  55603609 ttaactttcaaaaacttgcaattttaatcccctgtgtacaaaaactactattttggccccc 55603549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 3e-47; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 1824155 - 1824040
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  1824155 taactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagccattttgcatctttggtccttttggtcaa 1824056  T
Q  212 ttttgacttattcaac 227  Q
    ||||||||||||||||    
T  1824055 ttttgacttattcaac 1824040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 1858600 - 1858485
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  1858600 taactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagccattttgcatctttggtccttttggtcaa 1858501  T
Q  212 ttttgacttattcaac 227  Q
    ||||||||||||||||    
T  1858500 ttttgacttattcaac 1858485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 10006368 - 10006483
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||||||| ||||||  ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10006368 taactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcccctttgcatctttggtccttttggtcaa 10006467  T
Q  212 ttttgacttattcaac 227  Q
    ||||||||||||||||    
T  10006468 ttttgacttattcaac 10006483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 5514005 - 5514119
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||    
T  5514005 taactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttgcccccctaaaatttagcccctttgcatctttggtccttttgatcaa 5514104  T
Q  212 ttttgacttattcaa 226  Q
    |||||||||||||||    
T  5514105 ttttgacttattcaa 5514119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 86 - 227
Target Start/End: Complemental strand, 10007866 - 10007725
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       ||||||||||||||||||||||||||||||| |||||| | |||| |||||||||  ||||||||||||||||||    
T  10007866 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggtcccctaagatttagcccc 10007767  T
Q  186 tttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  10007766 tttgcatctttggtccttttcgtcaattttgacttattcaac 10007725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 24123975 - 24123869
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||||| ||||||||| |||| |||||||||  || ||||||||||||||||||||||||||||||||||||||||||    
T  24123975 taactttcaaaaacttgcaattttggcctcttaagtactaaaattacaattttagcctcctaagatttagcccctttgcatctttggtccttttggtcaa 24123876  T
Q  212 ttttgac 218  Q
    |||||||    
T  24123875 ttttgac 24123869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 77 - 218
Target Start/End: Original strand, 30335628 - 30335769
Alignment:
Q  77 catataaactaggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaaga 176  Q
    |||| |||| ||||||||||||| |||       |||||||| ||||||||||||||||||| |  |||||||||||| ||||||||| |||||||||||    
T  30335628 cataaaaacaaggctaaagtgcatttttccacccttaacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaattttaaccccctaaga 30335727  T
Q  177 tttagcccctttgcatctttggtccttttggtcaattttgac 218  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  30335728 tttagcccctttgcatctttggtccttttgttcaattttgac 30335769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 22221441 - 22221333
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||| |||| ||||||  |||||||||||||||||||||||||||||||||||||| |||||||| ||||||| | |||    
T  22221441 taactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccctttacatctttgatccttttagccaa 22221342  T
Q  212 ttttgactt 220  Q
    |||||||||    
T  22221341 ttttgactt 22221333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 22227783 - 22227675
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||| |||| ||||||  |||||||||||||||||||||||||||||||||||||| |||||||| ||||||| | |||    
T  22227783 taactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccctttacatctttgatccttttagccaa 22227684  T
Q  212 ttttgactt 220  Q
    |||||||||    
T  22227683 ttttgactt 22227675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 18970934 - 18971040
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||  |||||||| |||||||||| ||||||||||||| | |||    
T  18970934 taactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttgacccctgaagatttaacccctttgcaactttggtcctttttgccaa 18971033  T
Q  212 ttttgac 218  Q
    |||||||    
T  18971034 ttttgac 18971040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 30336578 - 30336472
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||  |||||| ||| | |||||||||||||||||||||| |||| |||||||||||||  ||||||||||||||||||||||||||    
T  30336578 taactttcaaaaacttataattttagcctcctaagtacaaaaactacaattttaaccctctaagatttagccattttgcatctttggtccttttggtcaa 30336479  T
Q  212 ttttgac 218  Q
    |||||||    
T  30336478 ttttgac 30336472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 217
Target Start/End: Original strand, 22220412 - 22220517
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||| ||||||||||||| |||| || ||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||    
T  22220412 taactttaaaatacttgcaattttgaccccctatgtataaaaactacaattttggccccctaagatttagcccatttgcatctttggtccttttgatcaa 22220511  T
Q  212 ttttga 217  Q
    ||||||    
T  22220512 ttttga 22220517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 32207402 - 32207302
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||| |||||||||||||||||||| | || ||||||||||||||||||||||| || | |||||||||||| |||||||||||||||||||||||||||    
T  32207402 taaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaattttggcctcttaagatttagcctctttgcatctttggtccttttggtcaa 32207303  T
Q  212 t 212  Q
    |    
T  32207302 t 32207302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 43661288 - 43661395
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||| ||| ||||| || ||||||||| |||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  43661288 ttaattttaaaaaagttacaattttggtcccttatgtacaaaaactataattttggccccctaagatttagcccctttgcatctttggttcttttggtca 43661387  T
Q  211 attttgac 218  Q
    | ||||||    
T  43661388 actttgac 43661395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 18978043 - 18978149
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||| ||||| |||||||   |||    
T  18978043 taactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttggccccttaagatttagcccctttgcaactttgatccttttttccaa 18978142  T
Q  212 ttttgac 218  Q
    |||||||    
T  18978143 ttttgac 18978149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 24122906 - 24123012
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||| ||||||||||| |||| ||||||||||||||| ||||||   |||||||||||||||  |||||||||||||||||||||||||||    
T  24122906 taactttaaaaaatttgcaattttgaccccctaagtacaaaaactataattttagtcccctaagatttagcttctttgcatctttggtccttttggtcaa 24123005  T
Q  212 ttttgac 218  Q
    |||||||    
T  24123006 ttttgac 24123012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 1823575 - 1823692
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgca-tctttggtccttttggtc 209  Q
    |||||||| ||||||||||||||||| |||  ||||||||||||||||||||| |  ||||||||||||||||| |||||| | |||||||||||||| |    
T  1823575 ttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccatttgcattttttggtccttttggcc 1823674  T
Q  210 aattttgacttattcaac 227  Q
    |||||||| |||||||||    
T  1823675 aattttgatttattcaac 1823692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 1858020 - 1858137
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgca-tctttggtccttttggtc 209  Q
    |||||||| ||||||||||||||||| |||  ||||||||||||||||||||| |  ||||||||||||||||| |||||| | |||||||||||||| |    
T  1858020 ttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccatttgcattttttggtccttttggcc 1858119  T
Q  210 aattttgacttattcaac 227  Q
    |||||||| |||||||||    
T  1858120 aattttgatttattcaac 1858137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 12351944 - 12352051
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| | |||||  |||   |||||||| ||    
T  12351944 ttaactttcaaaaatttgcaattttgaccccctaagtacaaaaactacaattttgaccccctaagatttagcctcattgcaattttaacccttttggaca 12352043  T
Q  211 attttgac 218  Q
    ||||||||    
T  12352044 attttgac 12352051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 12353438 - 12353332
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||||||||| |||||  |||  | ||||||||||    
T  12353438 ttaactttcaaaaacttgcaattttggccccctaagtac-aaaactataattttggccccctaagatttagccccattgcaattttaattcttttggtca 12353340  T
Q  211 attttgac 218  Q
    ||||||||    
T  12353339 attttgac 12353332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 29968415 - 29968308
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||| ||  |||||||||||||||||| ||||| ||||  || |||||| ||    
T  29968415 ttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattctggtcccctaagatttagccccattgcaactttaatcattttggcca 29968316  T
Q  211 attttgac 218  Q
    ||||||||    
T  29968315 attttgac 29968308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 8388486 - 8388592
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||| |||||||||| ||||| || |||||||||||| ||||||| |||||||||||||||||||||||| | |||||||||||||  |||    
T  8388486 taacttttaaaaagttgcaattttagccccctatgtacaaaaactataattttggccccctaagatttagcccctttgcgtttttggtccttttgcccaa 8388585  T
Q  212 ttttgac 218  Q
    |||||||    
T  8388586 ttttgac 8388592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 30568914 - 30569016
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    ||||||||| || ||||||||  | |||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |    
T  30568914 tttcaaaaagttacaattttgatctcttaggtacaaaaactataattttgatcccctaagatttagcccctttgcatctttggtccttttggccaattgt 30569013  T
Q  216 gac 218  Q
    |||    
T  30569014 gac 30569016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 84 - 218
Target Start/End: Complemental strand, 8389794 - 8389660
Alignment:
Q  84 actaggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcc 183  Q
    |||||| |||||||||||||       |||| ||||||||| |||||||||||| |||||| |||||||||||||||||||   ||||||||||||| ||    
T  8389794 actaggttaaagtgcacttttcccctcttaagtttcaaaaagttgcaattttggtcccttatgtacaaaaactacaattttagtcccctaagatttaacc 8389695  T
Q  184 cctttgcatctttggtccttttggtcaattttgac 218  Q
    ||||| ||| |||||||||||||  ||||||||||    
T  8389694 cctttacatttttggtccttttgaacaattttgac 8389660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 18979197 - 18979091
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||| ||||||||||||||||||| ||| || |||||||||||||||| |||| || |||||||||| |||||| ||||| ||||||| | |||    
T  18979197 taactttcaacaacttgcaattttggccccctaaatataaaaactacaattttggccccttatgatttagcccatttgcaactttgatcctttttgccaa 18979098  T
Q  212 ttttgac 218  Q
    |||||||    
T  18979097 ttttgac 18979091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 11456679 - 11456748
Alignment:
Q  158 caattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
    |||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11456679 caattttggccccctatgatttagccccattgcatctttggtccttttggtcaattttgacttattcaac 11456748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 11282031 - 11282138
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||| ||||| |||||||||||||||| ||  ||||||||  |||||||||||||||||||||||| ||||||||||  |||| || ||||| |||    
T  11282031 ttaacttttaaaaagttgcaattttggccccctatatacaaaaatgacaattttgaccccctaagatttaacccctttgcaattttgatctttttgatca 11282130  T
Q  211 attttgac 218  Q
    ||||||||    
T  11282131 attttgac 11282138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 43661901 - 43661794
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||||||||| ||||||||||   ||  || |||||||||||| ||||||| ||||||||||||| ||||  |||||||||||||||||||| |||    
T  43661901 ttaactttcaaaaagttgcaattttaatcctctatgtacaaaaactaaaattttggccccctaagatttcgcccaattgcatctttggtccttttgatca 43661802  T
Q  211 attttgac 218  Q
    ||||||||    
T  43661801 attttgac 43661794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 2379999 - 2379895
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||| ||| ||||||||||||| | |||| ||| ||||||||||| |||| ||||||||||| | |||||||||||||| |||||||||||    
T  2379999 taactttcaaaaagttgtaattttggcccct-atgtacgaaa-ctacaattttggccccttaagatttagctcatttgcatctttggttcttttggtcaa 2379902  T
Q  212 ttttgac 218  Q
    |||||||    
T  2379901 ttttgac 2379895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 30570305 - 30570227
Alignment:
Q  140 ccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgac 218  Q
    ||||| ||||||||| || ||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  30570305 ccttatgtacaaaaattagaattttggccccctaagatttagcccttttgcatctttggtccttttggccaattttgac 30570227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 24359866 - 24359937
Alignment:
Q  147 tacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgac 218  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||| |||  ||||||||||||||||    
T  24359866 tacaaaaactacaattttgaccccctaagatttagcctatttgcatctttagtcactttggtcaattttgac 24359937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 29043421 - 29043528
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||| |||||||| | || |||||| |||| || |||||||||||||||||||  ||| ||||||||||||||||||| ||||||| ||||||| | ||    
T  29043421 ttaaccttcaaaaagtcgcgattttgaccccctatgtacaaaaactacaattttttccctctaagatttagcccctttgtatctttgatccttttagaca 29043520  T
Q  211 attttgac 218  Q
    ||||||||    
T  29043521 attttgac 29043528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 40471224 - 40471118
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||| |||||||| ||||||||| || | || ||||||||||||||||||  |||| ||||||||| || ||||| |||||||||| |||||||||    
T  40471224 ttaactttaaaaaacttacaattttggtccataaa-tacaaaaactacaattttagccccttaagatttaacctctttgtatctttggtcattttggtca 40471126  T
Q  211 attttgac 218  Q
    ||||||||    
T  40471125 attttgac 40471118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 11287800 - 11287906
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| |||||||||||||||||||||  |||||||| |||||||||||||| |||||||||| ||| | ||||||||  |||| || ||||  ||||    
T  11287800 taactttaaaaaacttgcaattttggcccactaagtacagaaactacaattttggccccctaagaattaactcctttgcaattttgatcatttttatcaa 11287899  T
Q  212 ttttgac 218  Q
    |||||||    
T  11287900 ttttgac 11287906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 18488331 - 18488245
Alignment:
Q  120 aaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttg 206  Q
    ||||| |||||||||| | ||| ||  ||||||||||||||||||| ||| ||||||| || |||||||||||||||||||||||||    
T  18488331 aaaaagttgcaattttagtcccctatatacaaaaactacaattttggccctctaagatataacccctttgcatctttggtccttttg 18488245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 2378919 - 2378990
Alignment:
Q  147 tacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgac 218  Q
    ||||||||| | |||||||||||| |||||| |||||  ||||||||||||||||||||| |||||||||||    
T  2378919 tacaaaaaccataattttgaccccttaagatctagcctatttgcatctttggtccttttgatcaattttgac 2378990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 11283287 - 11283180
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||||||||| ||| |||||| ||||| || ||| |||||  |||||||||  ||||||| ||||||||||||||||  |||| || |||| ||||    
T  11283287 ttaactttcaaaaagttgtaattttagccccctatgtataaaaatgacaattttggtcccctaaaatttagcccctttgcaattttgatcattttagtca 11283188  T
Q  211 attttgac 218  Q
    ||||||||    
T  11283187 attttgac 11283180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 24488756 - 24488678
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgca 191  Q
    |||||||||||||||||||||||||||||| ||| ||  ||||| ||||||||| |||| |||||||||||||| |||||    
T  24488756 taactttcaaaaacttgcaattttggccccctaaatatcaaaacaacaattttg-ccccgtaagatttagccccattgca 24488678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 40469363 - 40469470
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||||||||| ||| ||||||   ||  ||| |||||||| ||||||||| ||| | |||||||||| ||||||| ||||||||| |||||| |||    
T  40469363 ttaactttcaaaaatttgtaattttcatcctctaaatacaaaaattacaattttaaccacataagatttagtccctttgtatctttggttcttttgatca 40469462  T
Q  211 attttgac 218  Q
    ||||||||    
T  40469463 attttgac 40469470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 34625241 - 34625163
Alignment:
Q  148 acaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaa 226  Q
    |||||||||||||||||  ||||||| |||||| || ||| ||| ||||| ||||||||||||||||||||||| ||||    
T  34625241 acaaaaactacaattttagccccctatgatttaccctcttcgcaactttgatccttttggtcaattttgacttagtcaa 34625163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 5514339 - 5514260
Alignment:
Q  120 aaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtc 200  Q
    |||||||||||||||| |||   ||| |||||||||||||||||||| || |||| ||||||||| |||||||||||||||    
T  5514339 aaaaacttgcaattttagccttctaaatacaaaaactacaattttga-cctctaaaatttagcccatttgcatctttggtc 5514260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 32974013 - 32973905
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||  |||| |||||||||||  | |||  ||||| ||||||||| ||| ||| | |||||||||||||||| ||  |||||||||| |||    
T  32974013 taactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccctctatgttttagcccctttgcattttcagtccttttggacaa 32973914  T
Q  212 ttttgactt 220  Q
    |||||||||    
T  32973913 ttttgactt 32973905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 23170031 - 23169954
Alignment:
Q  149 caaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaa 226  Q
    ||||||||| |||||||  ||| || |||||||| |  ||||||||||  ||||||||||||||||||||||||||||    
T  23170031 caaaaactataattttggtcccttatgatttagctcaattgcatctttaatccttttggtcaattttgacttattcaa 23169954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 32968454 - 32968588
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        ||||||||||||  |||| |||||||||||  | |||  ||||| ||||||||| ||| ||| | |||||||||    
T  32968454 taggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccctctatgttttagcccc 32968553  T
Q  186 tttgcatctttggtccttttggtcaattttgactt 220  Q
    ||||||| ||  |||||||||  ||||||||||||    
T  32968554 tttgcattttcagtccttttgagcaattttgactt 32968588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 45112894 - 45113000
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||| ||| |||||| | | || ||||||||||| || |||||||  ||||||||| ||||||||||||||  |||| || ||||  ||||    
T  45112894 taactttcaaaaatttgtaattttagtctct-aagtacaaaaattataattttggtcccctaagaattagcccctttgcaattttgatcttttttatcaa 45112992  T
Q  212 ttttgact 219  Q
    ||||||||    
T  45112993 ttttgact 45113000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 45114593 - 45114488
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||||  |  || ||||| ||||||||||||||  || |||||||||| || | ||||| ||||  || ||||||| ||    
T  45114593 taactttcaaaaacttgcaattttggttcactatgtacacaaactacaattttg-gcctctaagatttaacctcattgcaactttaatcattttggttaa 45114495  T
Q  212 ttttgac 218  Q
    |||||||    
T  45114494 ttttgac 45114488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 217
Target Start/End: Original strand, 38974819 - 38974924
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||  |||| |||||||||||  | |||  ||||| ||||||||| ||||||| | ||||||||| |||||  ||  |||||||||| |||    
T  38974819 taactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccccattgcagtttcagtccttttgggcaa 38974918  T
Q  212 ttttga 217  Q
    ||||||    
T  38974919 ttttga 38974924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 217
Target Start/End: Complemental strand, 38980121 - 38980016
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||  |||| |||||||||||  | |||  ||||| ||||||||| ||||||| | ||||||||| |||||  ||  |||||||||| |||    
T  38980121 taactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccccattgcagtttcagtccttttgggcaa 38980022  T
Q  212 ttttga 217  Q
    ||||||    
T  38980021 ttttga 38980016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 217
Target Start/End: Original strand, 39005917 - 39006022
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||  |||| |||||||||||  | |||  ||||| ||||||||| ||||||| | ||||||||| |||||  ||  |||||||||| |||    
T  39005917 taactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccccattgcagtttcagtccttttgggcaa 39006016  T
Q  212 ttttga 217  Q
    ||||||    
T  39006017 ttttga 39006022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 217
Target Start/End: Complemental strand, 39011218 - 39011113
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||  |||| |||||||||||  | |||  ||||| ||||||||| ||||||| | ||||||||| |||||  ||  |||||||||| |||    
T  39011218 taactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccccattgcagtttcagtccttttgggcaa 39011119  T
Q  212 ttttga 217  Q
    ||||||    
T  39011118 ttttga 39011113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 17844333 - 17844403
Alignment:
Q  146 gtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttga 217  Q
    ||||||||||||||||||||  ||| ||| ||||| || ||||  ||||||||||||||||| |||||||||    
T  17844333 gtacaaaaactacaattttggtccc-taacatttaacctctttatatctttggtccttttggccaattttga 17844403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 184
Target Start/End: Complemental strand, 5003175 - 5003103
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtac-aaaaactacaattttgaccccctaagatttagccc 184  Q
    |||||||||||| |||||||||||   ||| ||||||| |||||| |||||||||  |||||||||||||||||    
T  5003175 taactttcaaaatcttgcaattttaaacccctaagtactaaaaaccacaattttg-tcccctaagatttagccc 5003103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 42982760 - 42982662
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagccc 184  Q
    ||||||||||||||||||       |||| ||| ||||| ||| |||||||||||| |    |||||||||||||||||||||||  |||| |||||||    
T  42982760 taggctaaagtgcacttttccacctttaagttttaaaaagttgtaattttggccccctgtaaacaaaaactacaattttgacccctcaagaattagccc 42982662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 8e-45; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 7314904 - 7315018
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||||||||| |||||  ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7314904 taactttcaaaaacttgcaattttggcccct-aagtatcaaaacaacaattttgaccccctaagatttagcccctttgcatctttggtcattttggtcaa 7315002  T
Q  212 ttttgacttattcaac 227  Q
    ||||||||||||||||    
T  7315003 ttttgacttattcaac 7315018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 86 - 227
Target Start/End: Complemental strand, 7316397 - 7316256
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       ||||||||||||||||||||||||||||||| ||| ||   |||| ||||||||| |||| ||||||||||||||    
T  7316397 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaaatattgaaaccacaattttggccccttaagatttagcccc 7316298  T
Q  186 tttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  7316297 tttgcatctatggtccttttggtcaattttgacttattcaac 7316256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 1829680 - 1829574
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||||||||||||||| |||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  1829680 taacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttggccccctaagatttagcccctttgcatctttggtcattttggtcaa 1829581  T
Q  212 ttttgac 218  Q
    |||||||    
T  1829580 ttttgac 1829574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 86 - 227
Target Start/End: Original strand, 8659263 - 8659404
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||||| ||||||| ||||| ||||||| | |||||||||||||||||||    
T  8659263 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcccc 8659362  T
Q  186 tttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
     ||||| ||||||||||||||  |||||||||| || |||||    
T  8659363 attgcaactttggtccttttgaccaattttgacctagtcaac 8659404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 86 - 218
Target Start/End: Original strand, 27437826 - 27437958
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       |||||||| ||||| |||||||||||||||| ||   | ||||||||||||||||||||||||||||||||| ||    
T  27437826 taggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctcc 27437925  T
Q  186 tttgcatctttggtccttttggtcaattttgac 218  Q
    |||||| ||||||||||||||| ||||||||||    
T  27437926 tttgcaactttggtccttttggccaattttgac 27437958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 16704600 - 16704469
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||  |||||||||||| |    
T  16704600 taggctaaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgatcctttaagatttagcctc 16704501  T
Q  186 tttgcatctttggtccttttggtcaattttga 217  Q
    |||||| || || ||||||| |||||||||||    
T  16704500 tttgcaactatgatcctttttgtcaattttga 16704469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 26575131 - 26575025
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||| | |||||||| ||||| ||||||| | |||    
T  26575131 taactttcaaaaacttgcaattttaaccccttaagtacaaaaactacaattttggccccctaagatttaactcctttgcaactttgatcctttttgccaa 26575032  T
Q  212 ttttgac 218  Q
    |||||||    
T  26575031 ttttgac 26575025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 17496821 - 17496937
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgacccc-ctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||||||||||| |||||||  |||  |||||||||||||| |||||||| |||| |||||||||| || |||||||||||||||||||||| |||    
T  17496821 taactttcaaaaacttacaattttaaccctctaagtacaaaaactgcaattttggcccccctaagatttaacctctttgcatctttggtccttttgatca 17496920  T
Q  211 attttgacttattcaac 227  Q
    |||||||||||||||||    
T  17496921 attttgacttattcaac 17496937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 3721636 - 3721751
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||| | ||||| |||||| |||||||||||||| ||||| ||||||||||||||  |||    
T  3721636 taactttcaaaaacttgcaattttgaccccctaagtaccaaaaccataatttagaccccttaagatttagccccattgcaactttggtccttttgaccaa 3721735  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  3721736 ttttgacctagtcaac 3721751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 8821871 - 8821991
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||||| ||||||| ||||| ||||||| | |||||||||||||||| ||    
T  8821871 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagctcc 8821970  T
Q  186 tttgcatctttggtccttttg 206  Q
     ||||| ||||||||||||||    
T  8821971 attgcaactttggtccttttg 8821991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 8822894 - 8822776
Alignment:
Q  88 ggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctt 187  Q
    ||||||||||||||||       |||||||||||||||||||||||||| |||| ||||||| ||||| ||||||| | ||||||||||||||||||  |    
T  8822894 ggctaaagtgcacttttccctctttaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagcccaat 8822795  T
Q  188 tgcatctttggtccttttg 206  Q
    |||| ||||||||||||||    
T  8822794 tgcaactttggtccttttg 8822776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 111 - 215
Target Start/End: Original strand, 6840215 - 6840319
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||| ||||||||| |||| ||||||||||||||| ||||||||||| ||||||||||| ||||||||||  ||||||||||||||| ||||||||  ||    
T  6840215 ttaagtttcaaaaagttgcgattttggccccttaaatacaaaaactataattttgaccctctaagatttaatccctttgcatctttgatccttttgacca 6840314  T
Q  211 atttt 215  Q
    |||||    
T  6840315 atttt 6840319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 10785990 - 10785883
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||| ||||||||||  |||| |||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||||   |||    
T  10785990 taacttttaaaaatttgcaattttaaccccctaagtacaaaaactacaattttaaccccttaagatttagcccctttgcaactttgatcctttttaccaa 10785891  T
Q  212 ttttgact 219  Q
    ||||||||    
T  10785890 ttttgact 10785883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 10784616 - 10784710
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtcctttt 205  Q
    |||||||| ||||||||||||||||  |||| |||||| |||||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||    
T  10784616 ttaacttttaaaaacttgcaattttaaccccctaagtataaaaactacaattttggcccccaaagatttagcccctttgcaactttgatcctttt 10784710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 26574643 - 26574748
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||  ||  ||||||||||||||||| |||||| ||| |||||||||||||||||||| ||||| || |||| |||||    
T  26574643 taactttcaaaaacttgcaattttgaacctctaagtacaaaaactaca-ttttgatcccttaagatttagcccctttgcaactttgatcttttttgtcaa 26574741  T
Q  212 ttttgac 218  Q
    |||||||    
T  26574742 ttttgac 26574748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 14823687 - 14823546
Alignment:
Q  78 atataaactaggctaaagtgcactttnnnnnnn-ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaaga 176  Q
    ||||||| ||||||||||||||||||        |||| ||| |||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||    
T  14823687 atataaaataggctaaagtgcacttttttcccccttaattttaaaaaacttgcaattttagccccttaagtacagaaactacaattttggccccctaaga 14823588  T
Q  177 tttagcccctttgcatctttggtccttttggtcaattttgac 218  Q
    |||||  || ||||| | ||  | ||||||||||||||||||    
T  14823587 tttagaaccgttgcaaccttaattcttttggtcaattttgac 14823546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 115 - 219
Target Start/End: Complemental strand, 27322142 - 27322038
Alignment:
Q  115 ctttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattt 214  Q
    ||||||||| ||||||||||||||||| ||||||| ||||| ||||||||  |||||||||| ||||||||||||| | ||| ||||||||| || ||||    
T  27322142 ctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccctaagaattagcccctttgcttatttcgtccttttgctctattt 27322043  T
Q  215 tgact 219  Q
    |||||    
T  27322042 tgact 27322038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 34834656 - 34834541
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||  | | ||||||  ||||| ||||||| | ||||||||||||||||||| ||||| ||||||||||||||  |||    
T  34834656 taactttcaaaaacttgcaattttgatctcctaagtatcaaaaccacaatttagcccccctaagatttagccccattgcaactttggtccttttgaccaa 34834557  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  34834556 ttttgacctagtcaac 34834541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 8660280 - 8660175
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||| ||||||| | |||||||||||||||| || ||||| ||||| ||||||||  |||    
T  8660280 taactttcaaaaacttgcaattttgacccct-aagtaccaaaaccacaatttagcccccctaagatttagctccattgcaactttgatccttttgaccaa 8660182  T
Q  212 ttttgac 218  Q
    |||||||    
T  8660181 ttttgac 8660175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 5658814 - 5658886
Alignment:
Q  146 gtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgac 218  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  5658814 gtacaaaaactacaattttgatcccttaagatttagcccatttgcaactttgatccttttggtcaattttgac 5658886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 14822383 - 14822490
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||| |||||||||||||||||||||||||| |||||| | |||||||||||||| ||||||||||||||| | | ||||| ||||  |||||||  ||     
T  14822383 ttaattttcaaaaacttgcaattttggccccataagtatagaaactacaattttggccccctaagatttagtctcattgcaactttaatccttttaatct 14822482  T
Q  211 attttgac 218  Q
    ||||||||    
T  14822483 attttgac 14822490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 210
Target Start/End: Complemental strand, 3333095 - 3333005
Alignment:
Q  120 aaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||| |||| ||||||||||| || ||||||||||||||||||| |||| |||| |||||||||||||||| ||||| ||||||| ||||    
T  3333095 aaaaagttgcgattttggccccctatgtacaaaaactacaattttaaccctctaaaatttagcccctttgcaactttgatccttttagtca 3333005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 113 - 218
Target Start/End: Original strand, 34830927 - 34831032
Alignment:
Q  113 aactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaat 212  Q
    |||||||||||| |||||  ||||||||| ||||||| ||||| ||||||| | ||||||||||||||||| | ||||| ||||||||| ||||  ||||    
T  34830927 aactttcaaaaatttgcatatttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccacattgcaactttggtccctttgaccaat 34831026  T
Q  213 tttgac 218  Q
    ||||||    
T  34831027 tttgac 34831032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 3333566 - 3333488
Alignment:
Q  148 acaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaa 226  Q
    ||||||||||||||||| |||| ||| ||||||||||||| ||| ||||| ||||||||| ||||||||||||| ||||    
T  3333566 acaaaaactacaattttaaccctctatgatttagccccttcgcaactttgatccttttggccaattttgacttagtcaa 3333488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 12350823 - 12350898
Alignment:
Q  113 aactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttg 189  Q
    |||||| | ||||||||||||||| ||||| | ||| ||||||||||||||| ||||||||||||||||||||||||    
T  12350823 aactttaataaacttgcaattttgacccct-atgtataaaaactacaattttaaccccctaagatttagcccctttg 12350898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 12382780 - 12382680
Alignment:
Q  120 aaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgact 219  Q
    ||||| ||| ||||||| |||| ||||||  ||||||| |||||||| |||| |||||||| ||| |||||||||||||||||||| |  ||||||||||    
T  12382780 aaaaatttgtaattttgaccccctaagtattaaaactataattttgatccccaaagatttaacccttttgcatctttggtccttttagctaattttgact 12382681  T
Q  220 t 220  Q
    |    
T  12382680 t 12382680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 26949260 - 26949156
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||||||||| ||||||||||| |||  |||||| ||||||||||||||| | |  |||||||||| ||||||||||||||| ||  ||||| |||    
T  26949260 ttaactttcaaaaa-ttgcaattttgcccc--taagtataaaaactacaattttaatcttctaagatttaacccctttgcatctttagtgtttttgatca 26949164  T
Q  211 attttgac 218  Q
    ||||||||    
T  26949163 attttgac 26949156  T

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Target: chr6; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 6842386 - 6842254
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        ||| ||||||||| |||||||||||||||| || || ||||||||||||||||    || ||| |||||| |      
T  6842386 taggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaattttagttccttaaaatttagtctg 6842287  T
Q  186 tttgcatctttggtccttttggtcaattttgac 218  Q
    |||||||||||| ||||||||| ||||||||||    
T  6842286 tttgcatctttgatccttttggccaattttgac 6842254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 219
Target Start/End: Original strand, 27318341 - 27318447
Alignment:
Q  115 ctttcaaaaacttgcaattttggccccttaagtacaaaaactacaattt--tgaccccctaagatttagcccctttgcatctttggtccttttggtcaat 212  Q
    ||||||||| ||||||||||||||||| ||||||| ||||| |||||||     |||||||||| ||||||||||||| | ||| ||||||||  || ||    
T  27318341 ctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttcccccccccctaagaattagcccctttgcttatttcgtcctttttctctat 27318440  T
Q  213 tttgact 219  Q
    |||||||    
T  27318441 tttgact 27318447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 26717144 - 26717084
Alignment:
Q  158 caattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgac 218  Q
    ||||||||||||| ||||||||||| | |||||| ||||| |||||||| |||||||||||    
T  26717144 caattttgaccccttaagatttagctcttttgcaactttgatccttttgatcaattttgac 26717084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 16703595 - 16703684
Alignment:
Q  115 ctttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtcctttt 205  Q
    ||||||||||||||||||||||  || | || ||||||||||||||||||  |||||||| ||||| ||||||  || ||||| |||||||    
T  16703595 ctttcaaaaacttgcaattttgatccataaa-tacaaaaactacaattttagccccctaaaatttaaccccttcccaactttgatcctttt 16703684  T

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Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 163
Target Start/End: Complemental strand, 3722610 - 3722533
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattt 163  Q
    ||||||||||||||||||        ||||||||||||||||||||||||| |||  ||||||| ||||| |||||||    
T  3722610 taggctaaagtgcacttttccctccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaattt 3722533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 30494580 - 30494659
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgca 191  Q
    ||||||||||||| || | |||||||| || || ||| ||||||||  |||||| |  ||||||||||||||||||||||    
T  30494580 taactttcaaaaagttacgattttggcaccctatgtataaaaactatgattttggcttcctaagatttagcccctttgca 30494659  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 215
Target Start/End: Original strand, 29473100 - 29473204
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||| ||| ||||| ||||||||||||  || || | |||||||  ||||||||| ||| | |||| || |||||||||||  |||| ||||||| ||||    
T  29473100 ttaagttttaaaaagttgcaattttggttccctatgaacaaaaataacaattttggccctccaagaattggcccctttgcaattttgatcctttttgtca 29473199  T
Q  211 atttt 215  Q
    |||||    
T  29473200 atttt 29473204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 30495775 - 30495695
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgacccc-ctaagatttagcccctttgca 191  Q
    ||||||||||||| |||| |||||   ||| || |||||||||  ||||||||| |||| |||||||||||||| ||||||    
T  30495775 taactttcaaaaagttgcgattttaatcccctatgtacaaaaataacaattttggcccctctaagatttagcccatttgca 30495695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 8e-45; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 39153194 - 39153087
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  39153194 ttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgcatctttggtccttttggtca 39153095  T
Q  211 attttgac 218  Q
    ||||||||    
T  39153094 attttgac 39153087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 43060083 - 43059968
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||    
T  43060083 taactttcaaaaatttgaaattttgaccccttaagtacaaaaactacaattttgaccccttaagatttagctcatttgcatctttggtccttttggtcaa 43059984  T
Q  212 ttttgacttattcaac 227  Q
    ||||||||||||||||    
T  43059983 ttttgacttattcaac 43059968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 11437302 - 11437170
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||     
T  11437302 taggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccctaagatttaaccct 11437203  T
Q  186 tttgcatctttggtccttttggtcaattttgac 218  Q
    ||| |||||||| ||||||||||||||||||||    
T  11437202 tttacatctttgatccttttggtcaattttgac 11437170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 36613981 - 36613866
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| ||||    
T  36613981 taacttttaaaaacttgtaattttggccccctaagtacaaaaactacaattttgaccccctaagatttagcctctttgcaactttagtccttttgatcaa 36613882  T
Q  212 ttttgacttattcaac 227  Q
    ||||||||||||||||    
T  36613881 ttttgacttattcaac 36613866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 88 - 218
Target Start/End: Original strand, 45148581 - 45148710
Alignment:
Q  88 ggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctt 187  Q
    ||||||||||||||||       ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||| ||||||    
T  45148581 ggctaaagtgcactttttcccgcttaactttcaaaaacttgcaattttggccccctaagta-aaaaactacaattttgcccccctaagatttaacccctt 45148679  T
Q  188 tgcatctttggtccttttggtcaattttgac 218  Q
    |||||||||||||||||||| ||||||||||    
T  45148680 tgcatctttggtccttttggccaattttgac 45148710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 86 - 227
Target Start/End: Original strand, 24422798 - 24422939
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       |||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||    
T  24422798 taggctaaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagcccc 24422897  T
Q  186 tttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
     |||||  |||| |||||||||||||||||||| || |||||    
T  24422898 attgcaaatttgatccttttggtcaattttgacatagtcaac 24422939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 45150048 - 45149941
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttg-accccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||| ||||||||| ||    
T  45150048 taactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttgccccccctaagatttagcccctttgcatctttgatccttttggcca 45149949  T
Q  211 attttgac 218  Q
    ||||||||    
T  45149948 attttgac 45149941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 11436041 - 11436172
Alignment:
Q  87 aggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccct 186  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||  ||||||| |||||||||||||||| |||||||||||||| ||| |    
T  11436041 aggctaaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaattttggccccctaagatttaacccat 11436140  T
Q  187 ttgcatctttggtccttttggtcaattttgac 218  Q
    ||||||||||||| ||||||||||||||||||    
T  11436141 ttgcatctttggttcttttggtcaattttgac 11436172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 45157282 - 45157180
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  45157282 tttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaacccctttgcatctttggtccttttggtcaatttt 45157183  T
Q  216 gac 218  Q
    |||    
T  45157182 gac 45157180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 88 - 218
Target Start/End: Original strand, 51684366 - 51684496
Alignment:
Q  88 ggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctt 187  Q
    ||||||||||||||||       |||||||| ||||| |||||||||||||||| || ||| |||||||||||||||| |||||||||||||||||||||    
T  51684366 ggctaaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaattttggccccctaagatttagcccctt 51684465  T
Q  188 tgcatctttggtccttttggtcaattttgac 218  Q
    |||||||||||||||||||| ||||||||||    
T  51684466 tgcatctttggtccttttggccaattttgac 51684496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 36612876 - 36612991
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||||||||| ||||||||||||  | ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||    
T  36612876 ttaactttcaaaaatttgcaattttggatc-ttaagtacaaaaactacaattttaaccccctaagatttagtccctttgcatctttggtcattttggtca 36612974  T
Q  211 attttgacttattcaac 227  Q
    ||||| |||||||||||    
T  36612975 attttaacttattcaac 36612991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 50680354 - 50680470
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||||| ||||||||||||||||||||||| |||||| |||||||| ||||||   ||||||||||||| |||||||||||||||| ||||||||||||    
T  50680354 ttaacttccaaaaacttgcaattttggccccctaagtataaaaactataattttagtcccctaagatttaacccctttgcatctttgatccttttggtca 50680453  T
Q  211 attttgacttattcaac 227  Q
    |||||||||||||||||    
T  50680454 attttgacttattcaac 50680470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 86 - 215
Target Start/End: Complemental strand, 51685868 - 51685739
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        ||||||||||||| |||| ||||||||||  || ||||||||||||||||||||||||||||||||||||||||    
T  51685868 taggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaattttgaccccctaagatttagcccc 51685769  T
Q  186 tttgcatctttggtccttttggtcaatttt 215  Q
    |||||||||||||||||||||| |||||||    
T  51685768 tttgcatctttggtccttttggccaatttt 51685739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 43058809 - 43058920
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||  ||| |||||||||||||||||| |||||||| |||||||||||||    
T  43058809 taactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaattttagccctctaagatttagcccctttacatctttgatccttttggtcaa 43058908  T
Q  212 ttttgacttatt 223  Q
    ||||||||||||    
T  43058909 ttttgacttatt 43058920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 39222551 - 39222435
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||| ||  ||| ||||||||| |||| ||||||||||||||| |||||| ||    
T  39222551 ttaactttcaaaaacttgcaattttggccccctaagtataaaaactacaatgttagccctctaagattttgcccatttgcatctttggtctttttgggca 39222452  T
Q  211 attttgacttattcaac 227  Q
    |||||||||||||||||    
T  39222451 attttgacttattcaac 39222435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 39151954 - 39152061
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||| ||||||||||||| |||||||||||| || |||||||||||||||||||||| |  ||||||||| |||||||||||||||||||||||||||||    
T  39151954 ttaagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaattttgactctttaagatttaacccctttgcatctttggtccttttggtca 39152053  T
Q  211 attttgac 218  Q
    ||||||||    
T  39152054 attttgac 39152061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 37526955 - 37526840
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||||||||||||||||||||||| || ||| || | |||| ||||||||| |||| ||||||||||||||||||||||||||||| ||||| |||    
T  37526955 ttaactttcaaaaacttgcaattttggctccctaaatatagaaaccacaattttggcccc-taagatttagcccctttgcatctttggtctttttgatca 37526857  T
Q  211 attttgacttattcaac 227  Q
    |||||||||||||||||    
T  37526856 attttgacttattcaac 37526840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 24426152 - 24426037
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||| |||||  |||| | |||||||||||    
T  24426152 taactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagccccattgcaaatttgatacttttggtcaa 24426053  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  24426052 ttttgacctagtcaac 24426037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 25652742 - 25652853
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    |||||||||||||||||||||  |||||||||||||||| || || |||| ||| |||||||||||||| ||||||||||||||| |||||| |||||||    
T  25652742 tttcaaaaacttgcaattttgatcccttaagtacaaaaattataaatttggcccgctaagatttagcccatttgcatctttggtcattttggccaatttt 25652841  T
Q  216 gacttattcaac 227  Q
    ||||||||||||    
T  25652842 gacttattcaac 25652853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 52274992 - 52275107
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||  |||||||||||||||| | |||||  |||| |||||||||||||    
T  52274992 taactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgggcccctaagatttagcctcattgcaaatttgatccttttggtcaa 52275091  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  52275092 ttttgacatagtcaac 52275107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 39699844 - 39699738
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||| |||||||||||||| |||| |||||||| |||||||||||||| ||||||||||||||||||| ||||| ||||  |||||||||||||    
T  39699844 taactttcaataacttgcaattttgaccccctaagtacagaaactacaattttggccccctaagatttagccccattgcaactttaatccttttggtcaa 39699745  T
Q  212 ttttgac 218  Q
    |||||||    
T  39699744 ttttgac 39699738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 44404466 - 44404572
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||||| ||||||| |||||||| ||||||||  ||||||||||||||| ||||||||||    
T  44404466 taactttcaaaaactagcaattttagccccctaagtacaaaaactataattttggccccctaaaatttagccaatttgcatctttggtcattttggtcaa 44404565  T
Q  212 ttttgac 218  Q
    |||||||    
T  44404566 ttttgac 44404572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 35594241 - 35594347
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||| ||||| |||||  |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| | |||    
T  35594241 taactttcaaaaacttgcaattttgacccct-aagtattaaaactacaattttgacccc-taaaatttagcccctttgcatctttggtccttttagccaa 35594338  T
Q  212 ttttgactt 220  Q
    |||||||||    
T  35594339 ttttgactt 35594347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 41364852 - 41364967
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||||||| ||| ||| ||||| ||||||| | ||||||||||||||||||| ||||| |||||||| ||||| ||||    
T  41364852 taactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcccccctaagatttagccccattgcaactttggtcattttgatcaa 41364951  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  41364952 ttttgacctagtcaac 41364967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 43378791 - 43378684
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||||||||||||||| ||||||||  ||| |||||||||||| ||||||||||||| ||||||||||||| |||||||||||||  |||||||||||     
T  43378791 ttaactttcaaaaacttacaattttgatcccctaagtacaaaaattacaattttgaccacctaagatttagcacctttgcatctttaatccttttggtcg 43378692  T
Q  211 attttgac 218  Q
    ||||||||    
T  43378691 attttgac 43378684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 112 - 204
Target Start/End: Complemental strand, 33088694 - 33088602
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttt 204  Q
    |||| |||||||||||||||||||| ||| |||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||| ||||    
T  33088694 taacattcaaaaacttgcaattttgaccctttaagtacaaaaactacaattttgcctccctaagatttagcccctttgcaactttggttcttt 33088602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 7675537 - 7675450
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttgg 198  Q
    |||||||||||||||||||||||||| || | |||||| ||||| || ||||||||||||||||||||||||||||||||||||||||    
T  7675537 ttaactttcaaaaacttgcaattttgccctcctaagtaaaaaaattataattttgaccccctaagatttagcccctttgcatctttgg 7675450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 40384748 - 40384855
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||| ||||||||| |||||||||| | | | || ||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||| ||    
T  40384748 ttaattttcaaaaagttgcaattttagtctcctatgtacaaaaactacaattttgatcccctaaaatttagcctctttgcatctttggtccttttggcca 40384847  T
Q  211 attttgac 218  Q
    ||||||||    
T  40384848 attttgac 40384855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 52828143 - 52828032
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    ||||||||||||||||||||||| || ||||||| ||||| ||||||| | ||||||||||||||||||| ||||| ||||||||||||||  |||||||    
T  52828143 tttcaaaaacttgcaattttggctccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgcaactttggtccttttgaccaatttt 52828044  T
Q  216 gacttattcaac 227  Q
    ||| || |||||    
T  52828043 gacctagtcaac 52828032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 219
Target Start/End: Complemental strand, 35067111 - 35066972
Alignment:
Q  80 ataaactaggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagattt 179  Q
    ||||| ||||||||||||||||||       |||| ||||||||| |||| ||||||||||| || | |||||||||||||||||| |||||||| ||||    
T  35067111 ataaaataggctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctatgaacaaaaactacaattttggccccctaatattt 35067012  T
Q  180 agcccctttgcatctttggtccttttggtcaattttgact 219  Q
    ||||||||||||    | ||||||||||||||||||||||    
T  35067011 agcccctttgcaataatagtccttttggtcaattttgact 35066972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 52827371 - 52827477
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||| |||||||   ||||||||||||||||||| ||||| ||||||||||||||  |||    
T  52827371 taactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccattgcaactttggtccttttgaccaa 52827470  T
Q  212 ttttgac 218  Q
    |||||||    
T  52827471 ttttgac 52827477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 35595270 - 35595163
Alignment:
Q  112 taactttcaaaaactt-gcaattttggccccttaagtacaaaaacta-caattttgaccccctaagatttagcccctttgcatctttggtccttttggtc 209  Q
    ||||||| |||||||| ||||||||| |||| || ||| |||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  35595270 taactttaaaaaacttagcaattttgaccccctatgtataaaaactaacaattttggcccc-taagatttagcccctttgcatctttggtccttttggtc 35595172  T
Q  210 aattttgac 218  Q
    |||||||||    
T  35595171 aattttgac 35595163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 23980569 - 23980455
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        ||||||| ||||||||||||||||||| || ||||||||||||||| |||||||  | ||||||||||||||||    
T  23980569 taggctaaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataattttggtctcctaagatttagcccc 23980470  T
Q  186 tttgcatctttggtc 200  Q
    ||||||| |||||||    
T  23980469 tttgcatttttggtc 23980455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 30249567 - 30249452
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||| ||| |||||||  |  ||| ||||||||||||||||||||||||| ||||||||||| | |||| ||||||| || ||||| ||||    
T  30249567 taactttcaaaaagttgtaattttgatcttttatgtacaaaaactacaattttgaccccttaagatttagctcatttgtatctttgatctttttgatcaa 30249468  T
Q  212 ttttgacttattcaac 227  Q
    |||||||||| |||||    
T  30249467 ttttgacttagtcaac 30249452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 41366207 - 41366093
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||| ||||||||| ||||||||||||  ||||| ||||||| | ||||||||||||||||||| ||||| ||||||||||||||  ||     
T  41366207 taactttcaaaaacatgcaattttagccccttaagtatcaaaaccacaatttag-ccccctaagatttagccccattgcaactttggtccttttgaccac 41366109  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  41366108 ttttgacctagtcaac 41366093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 45156072 - 45156179
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||| |||||||||||| |||||||| ||   || ||||||||||||||||||| |||| |||||||||| || ||||| |||||||||| |||||||||    
T  45156072 ttaagtttcaaaaacttacaattttgaccttctatgtacaaaaactacaattttaaccctctaagatttaacctctttgtatctttggtctttttggtca 45156171  T
Q  211 attttgac 218  Q
    ||||||||    
T  45156172 attttgac 45156179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 52276240 - 52276125
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||||| || |||   |||||||||||||||||| |||||  |||| |||||||| ||||    
T  52276240 taactttcaaaaatttgtaattttggccccctaagtacaaaaactataaatttagtcccctaagatttagccccattgcaaatttgatccttttgatcaa 52276141  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  52276140 ttttgacctagtcaac 52276125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 7983073 - 7983179
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||| ||||||||||||||||||| || |||  ||||| ||||||||| |||||||||||||| |||| |||||  |||  |||||||||||||    
T  7983073 taactttcaacaacttgcaattttggccccctatgtatcaaaaccacaattttgcccccctaagatttatccccattgcaaatttcatccttttggtcaa 7983172  T
Q  212 ttttgac 218  Q
    |||||||    
T  7983173 ttttgac 7983179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 39698562 - 39698692
Alignment:
Q  87 aggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccct 186  Q
    |||||||||||||||||       |||||||| |||||||| ||||||||||||| |||||||| |||||| |||||||  || ||||||||||||| |     
T  39698562 aggctaaagtgcactttaccccccttaacttttaaaaactttcaattttggccccctaagtacagaaactataattttg-gccactaagatttagcctcg 39698660  T
Q  187 ttgcatctttggtccttttggtcaattttgac 218  Q
    ||||| ||||  ||||||||||||||||||||    
T  39698661 ttgcaactttaatccttttggtcaattttgac 39698692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 46066547 - 46066652
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||| |||| ||||| |||||||| ||||||||||||||||||| | ||||||||||||||||  ||||||||| || || ||||| ||||    
T  46066547 taactttcaaaaagttgcgattttagccccttatgtacaaaaactacaatttt-agcccctaagatttagccaatttgcatctctgatctttttgatcaa 46066645  T
Q  212 ttttgac 218  Q
    |||||||    
T  46066646 ttttgac 46066652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 14999308 - 14999411
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||   ||||||| | | |||| ||||| ||||||| |||||    
T  14999308 taactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgatcctct---atttagctcatctgcaactttgatcctttttgtcaa 14999404  T
Q  212 ttttgac 218  Q
    |||||||    
T  14999405 ttttgac 14999411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 15000032 - 14999926
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| |||||||||||||||||  ||| ||||||||||| |||||||  ||||| ||||| |||||| || |||||| ||||| ||||||| |||||    
T  15000032 taacttttaaaaacttgcaattttgatcccctaagtacaaaatctacaatcatgaccacctaaaatttagtccatttgcaactttgatcctttttgtcaa 14999933  T
Q  212 ttttgac 218  Q
    |||||||    
T  14999932 ttttgac 14999926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 88 - 227
Target Start/End: Complemental strand, 50681705 - 50681570
Alignment:
Q  88 ggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctt 187  Q
    ||||||||||||||||       |||| ||||||||||||||||||||||| |  ||| || |||||||||||| |||  |||    ||||||||| |||    
T  50681705 ggctaaagtgcacttttcccctcttaattttcaaaaacttgcaattttggctctctaactataaaaactacaatattggtccc----gatttagcctctt 50681610  T
Q  188 tgcatctttggtccttttggtcaattttgacttattcaac 227  Q
    ||||||||||||||| ||| |||||||||| |||||||||    
T  50681609 tgcatctttggtcctattgatcaattttgatttattcaac 50681570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 39221402 - 39221453
Alignment:
Q  176 atttagcccctttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39221402 atttagcccctttgcatctttggtccttttggtcaattttgactaattcaac 39221453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 44412032 - 44411937
Alignment:
Q  123 aacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgac 218  Q
    ||||||||||||| | ||| ||||||||||||||||||||||  |||  |||||||||| ||||||||| ||||| ||||||| | ||||||||||    
T  44412032 aacttgcaattttagtcccctaagtacaaaaactacaattttacccctttaagatttaggccctttgcaactttgatcctttttgccaattttgac 44411937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 16290118 - 16290225
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||| |||||||| |||||||||||| |||||| ||| ||||||||||||||| ||| || |||| ||| ||||||| ||| ||||||| ||||   |||    
T  16290118 taacgttcaaaaagttgcaattttggtcccttatgtataaaaactacaattttaacctcccaagaattaacccctttacatatttggtcattttttccaa 16290217  T
Q  212 ttttgact 219  Q
    ||||||||    
T  16290218 ttttgact 16290225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 30248170 - 30248243
Alignment:
Q  146 gtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgactt 220  Q
    ||||||||||||||||||| |||| |||||||||| | |||||||||||||| || |||||| ||||||||||||    
T  30248170 gtacaaaaactacaatttt-accctctaagatttaactcctttgcatctttgatcattttggccaattttgactt 30248243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 31194077 - 31194185
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||| || | | |||||||||  | |||||||||||| ||||||| |||  ||||||||||||  |||||||||||||||||||| | |||    
T  31194077 taacttttaaaaagttacgaatttggccccacatgtacaaaaactaaaattttggccctttaagatttagcctttttgcatctttggtcctttttgccaa 31194176  T
Q  212 ttttgactt 220  Q
    || ||||||    
T  31194177 ttctgactt 31194185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 7674551 - 7674605
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgac 167  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  7674551 taacttttaaaaacttgcaattttgggccct-aagtacaaaaactacaattttgac 7674605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 33088091 - 33088194
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||| ||||||   | | ||| || |||||||||||||||   ||| ||||||||||||| ||||| ||||| |||||||||| |||    
T  33088091 taactttcaaaaacttgtaatttttatctcctaaatataaaaactacaattttattcccttaagatttagcccatttgcttctttagtccttttggccaa 33088190  T
Q  212 tttt 215  Q
    ||||    
T  33088191 tttt 33088194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 43377743 - 43377850
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||| ||| ||| |||||||||||| | || ||||||| ||||| || ||||||| || ||||| |||||| | |||| || ||||| ||||||||||||    
T  43377743 ttaatttttaaacacttgcaattttagtcctttaagtataaaaattataattttggcctcctaaaatttagtctctttacacctttgatccttttggtca 43377842  T
Q  211 attttgac 218  Q
    ||||||||    
T  43377843 attttgac 43377850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 217
Target Start/End: Original strand, 33739117 - 33739222
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||| |||| ||||||| ||||||| | ||| |||||| || ||| | ||||||| ||||| |||| ||||| ||||  || ||||||||||    
T  33739117 taactttcaaaagcttgtaattttgaccccttacgcacagaaactaaaaattttatcccctaaaatttaaccccattgcaactttaatcattttggtcaa 33739216  T
Q  212 ttttga 217  Q
    ||||||    
T  33739217 ttttga 33739222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 12390059 - 12389980
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgca 191  Q
    |||||||||||||| |||| ||||||  ||| || ||||||||| || ||||||| |||||| ||||||||||||||||||    
T  12390059 ttaactttcaaaaagttgcgattttgatcccctatgtacaaaaattataattttggccccct-agatttagcccctttgca 12389980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 2940325 - 2940395
Alignment:
Q  148 acaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgac 218  Q
    |||||||  |||||||||| ||||||||||||| || |||||||  |||| ||||||| || |||||||||    
T  2940325 acaaaaataacaattttgatcccctaagatttaacctctttgcaattttgatccttttagttaattttgac 2940395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 180
Target Start/End: Original strand, 11190383 - 11190477
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagattta 180  Q
    ||||||||||||||||||       |||| ||| ||||| ||||||||||||  || ||  |||||||||| ||||||||| || ||||||||||    
T  11190383 taggctaaagtgcacttttcaccccttaaattttaaaaagttgcaattttggttccctatatacaaaaactgcaattttgatcctctaagattta 11190477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 46525827 - 46525772
Alignment:
Q  162 tttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgac 218  Q
    |||| |||||||||||||||||||||||||  | || | ||||||||||||||||||    
T  46525827 tttggccccctaagatttagcccctttgcaattgtgat-cttttggtcaattttgac 46525772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 2e-42; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 22848215 - 22848330
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||| ||||    
T  22848215 taactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggctccctaagatttagcccctttgcagctttggtccttttgatcaa 22848314  T
Q  212 ttttgacttattcaac 227  Q
    ||||||||||||||||    
T  22848315 ttttgacttattcaac 22848330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 18797271 - 18797379
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||    
T  18797271 taactttcaaaaacttgcaattttgaccccttaagtattaaaactacaattttgaccccctaaaatttagcccctttgcatctttggtccttttagccaa 18797370  T
Q  212 ttttgactt 220  Q
    |||||||||    
T  18797371 ttttgactt 18797379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 86 - 226
Target Start/End: Original strand, 18904365 - 18904505
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       ||||||||||||||| |||||||||||||||||||||||||||||||||||||||   |||||||| ||||||||    
T  18904365 taggctaaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaattttggttccctaagaattagcccc 18904464  T
Q  186 tttgcatctttggtccttttggtcaattttgacttattcaa 226  Q
    ||| |||||||||||||||||| ||||||| ||||| ||||    
T  18904465 tttacatctttggtccttttggccaattttaacttagtcaa 18904505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 86 - 227
Target Start/End: Complemental strand, 18906090 - 18905950
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        |||||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||||||||| |     
T  18906090 taggctaaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaatttt-agcccctaagatttagctca 18905992  T
Q  186 tttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  18905991 tttgcatctttggtctttttgatcaattttgacttattcaac 18905950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 13030314 - 13030428
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||| ||||||||||||| ||||||||||| |||||||||  |||||||||||||||| | ||||||||||||||| ||||||||||    
T  13030314 taactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaatttttgccccctaagatttagctcttttgcatctttggtcattttggtcaa 13030412  T
Q  212 ttttgacttattcaac 227  Q
    ||||||||||||||||    
T  13030413 ttttgacttattcaac 13030428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 22588030 - 22587929
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||    
T  22588030 taactttcaaaaacttgcaattttggcccct-atgtacaaaaactacaattttggccccttaagatttagcccctttgcatctttggtccttttggccaa 22587932  T
Q  212 ttt 214  Q
    |||    
T  22587931 ttt 22587929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 11258888 - 11258773
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||| |||||  |||| |||||||||||||    
T  11258888 taactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagccccattgcagatttgatccttttggtcaa 11258789  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  11258788 ttttgacctagtcaac 11258773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 18299397 - 18299503
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||| ||||||||||| | |||||| |||||||||||||||| ||||||| |||||||||| |||||||||||| |||||||||||||    
T  18299397 taactttcaaaaactttcaattttggccacctaagtataaaaactacaattttggccccctatgatttagcccttttgcatctttgatccttttggtcaa 18299496  T
Q  212 ttttgac 218  Q
    |||||||    
T  18299497 ttttgac 18299503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 28617946 - 28618059
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||| |||||||||||||||||  ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||| |    
T  28617946 taactttcaaaatcttgcaattttggccccccaagtacaaaaacttcaattttg-ccccctaagatttagcccctttgcatctttggttattttggtcta 28618044  T
Q  212 ttttgacttattcaa 226  Q
    |||||||| ||||||    
T  28618045 ttttgactaattcaa 28618059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 217
Target Start/End: Complemental strand, 18300801 - 18300697
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||| |||    
T  18300801 taactttcataaacttgcaattttgaccccctaagtacaaaaactacaattttga-cccctataatttagcccctttgcatctttggtccttttggacaa 18300703  T
Q  212 ttttga 217  Q
    ||||||    
T  18300702 ttttga 18300697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 114 - 218
Target Start/End: Complemental strand, 26545596 - 26545492
Alignment:
Q  114 actttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatt 213  Q
    ||||||||||| ||||||||||| |||||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||    
T  26545596 actttcaaaaatttgcaattttgaccccttaaatacaaaaattataattttgaccctctaagatttagcccctttgcatctttggtcattttgatcaatt 26545497  T
Q  214 ttgac 218  Q
    |||||    
T  26545496 ttgac 26545492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 86 - 218
Target Start/End: Original strand, 36449776 - 36449908
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| |||| |||    
T  36449776 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgcccccccaagaattaggccc 36449875  T
Q  186 tttgcatctttggtccttttggtcaattttgac 218  Q
    ||||||  |||| ||||||||  ||||||||||    
T  36449876 tttgcaattttgatccttttgaccaattttgac 36449908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 38840596 - 38840464
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  |||||||||||||||||||    
T  38840596 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccccctaagatttagcccc 38840497  T
Q  186 tttgcatctttggtccttttggtcaattttgac 218  Q
     |||||  |||  |||||||| |||||||||||    
T  38840496 attgcaattttaatccttttgatcaattttgac 38840464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 213
Target Start/End: Complemental strand, 23869637 - 23869511
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       |||||||| |||||||||||||||||||||| ||| ||||||||||||||||||  | |||||||||||||||||    
T  23869637 taggctaaagtgcacttttccacccttaacttt-aaaaacttgcaattttggccccctaaatacaaaaactacaattttagctccctaagatttagcccc 23869539  T
Q  186 tttgcatctttggtccttttggtcaatt 213  Q
    |||||||||||| |||||||| ||||||    
T  23869538 tttgcatctttgatccttttgttcaatt 23869511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 24475248 - 24475354
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||| |||||| ||||| |||||| |||||||||||||||| |||||||  ||||||| | ||||||||||||||||||||||||||    
T  24475248 taactttcaaaaacttgtaatttttgccccctaagtataaaaactacaattttggccccctataatttagctcatttgcatctttggtccttttggtcaa 24475347  T
Q  212 ttttgac 218  Q
    |||||||    
T  24475348 ttttgac 24475354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 802664 - 802563
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    |||||||||||||||||||||||||| |  |||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||| ||||||||||    
T  802664 tttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttacccctttgcatatttggtcctttaggtcaatttt 802565  T
Q  216 ga 217  Q
    ||    
T  802564 ga 802563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 7899985 - 7899853
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||  |||||||||||||||||||    
T  7899985 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattttagccccctaagatttagcccc 7899886  T
Q  186 tttgcatctttggtccttttggtcaattttgac 218  Q
     ||| | ||||  || |||||||||||||||||    
T  7899885 attgtaactttaatctttttggtcaattttgac 7899853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 22587525 - 22587630
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||| || ||||||||| ||| ||  ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||    
T  22587525 taactttcaaaaagttccaattttggtcccctat-tacaaaaactacaattttggccccctaagatttagcctctttgcatctttggtccttttggccaa 22587623  T
Q  212 ttttgac 218  Q
    |||||||    
T  22587624 ttttgac 22587630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 810854 - 810753
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    |||||||||||||||||||||||||| |  |||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||| | ||||||||    
T  810854 tttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttacccctttgcatatttggtcctttagatcaatttt 810755  T
Q  216 ga 217  Q
    ||    
T  810754 ga 810753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 18869241 - 18869124
Alignment:
Q  112 taactttcaaaaacttg-caattttggccccttaagtacaaaaactacaattttgaccccctaagatttagccc-ctttgcatctttggtccttttggtc 209  Q
    ||||||||||||| ||| |||||||||||   |||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||| ||||| ||    
T  18869241 taactttcaaaaatttggcaattttggccttctaagtacaaaaactacaatttttatcccctaagatttagcccattttgcatctttggtctttttgatc 18869142  T
Q  210 aattttgacttattcaac 227  Q
    ||||||||||||||||||    
T  18869141 aattttgacttattcaac 18869124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 38839265 - 38839372
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||| |||||||||||||||||||| ||||| ||| ||||||||||||||||||| ||||||||||||||||||| |||||  |||  || |||||||||    
T  38839265 ttaattttcaaaaacttgcaattttagccccctaactacaaaaactacaattttggccccctaagatttagccccattgcaattttaatcattttggtca 38839364  T
Q  211 attttgac 218  Q
    ||||||||    
T  38839365 attttgac 38839372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 36450999 - 36450891
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||||| | ||||| |||| ||||| ||||||||  |||| ||||||||| ||    
T  36450999 ttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaatttcggccccccaagaattagctcctttgcaattttgatccttttggcca 36450900  T
Q  211 attttgact 219  Q
    |||||||||    
T  36450899 attttgact 36450891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 7898714 - 7898821
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||||||||||||||||||||||| ||| | |||||| | |||||||||||||| ||||||||||||||||||| |||||  |||  |||||||| |||    
T  7898714 ttaactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaattttggccccctaagatttagccccattgcaattttaatccttttgatca 7898813  T
Q  211 attttgac 218  Q
    ||||||||    
T  7898814 attttgac 7898821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 41878114 - 41878224
Alignment:
Q  111 ttaactttcaaaaact---tgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttgg 207  Q
    ||||||||||||||||   ||||||||||||||| |||||||| |||||||||||||| |||| |||||||||||||| |||||  |||  || ||||||    
T  41878114 ttaactttcaaaaactatttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagccccattgcaattttaatctttttgg 41878213  T
Q  208 tcaattttgac 218  Q
    |||||||||||    
T  41878214 tcaattttgac 41878224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 11257646 - 11257760
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||   |||| ||||| |||||||||||||||| || |||||||||||||||| |||||  |||| |||||||| ||||    
T  11257646 taactttcaaaaacttgcaattttaaaccct-aagtataaaaactacaattttggcctcctaagatttagccccattgcaaatttgatccttttgatcaa 11257744  T
Q  212 ttttgacttattcaac 227  Q
    ||||||| || |||||    
T  11257745 ttttgacatagtcaac 11257760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 41879290 - 41879183
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| ||||||| || |||||  |||  || ||||| |||    
T  41879290 ttaattttcaaaaacttgcaattttggccccctaagtacataaactacaattttaaccccctaaaatttagcaccattgcaattttaatcattttgatca 41879191  T
Q  211 attttgac 218  Q
    ||||||||    
T  41879190 attttgac 41879183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 217
Target Start/End: Complemental strand, 13570634 - 13570529
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| |||||||  |||| |||| |||| |||||| || ||||| ||||||| | |||    
T  13570634 taactttcaaaaacttgcaattttagtcccttaagtacaaaaactataattttggtcccccaagaattagtccctttacaactttgatcctttttgccaa 13570535  T
Q  212 ttttga 217  Q
    ||||||    
T  13570534 ttttga 13570529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 8535733 - 8535625
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||||||| |||||||  || ||||||| | ||||||||||||||||||||||||| ||||||||||||||    | ||||||| ||||||    
T  8535733 taacttttaaaaacttgtaattttgatcctttaagtagagaaactacaattttgaccccctaagaattagcccctttgcaatagtagtcctttaggtcaa 8535634  T
Q  212 ttttgactt 220  Q
    |||||||||    
T  8535633 ttttgactt 8535625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 32739647 - 32739706
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccc 171  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  32739647 taactttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttggccccc 32739706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 227
Target Start/End: Complemental strand, 1034570 - 1034432
Alignment:
Q  88 ggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctt 187  Q
    ||||||||||||||||       ||||||||||||||| ||||||||||||||| || |||| ||||| ||||||| | ||||||||||||||| ||  |    
T  1034570 ggctaaagtgcacttttccccccttaactttcaaaaacatgcaattttggccccctacgtaccaaaaccacaatttagcccccctaagatttag-ccaat 1034472  T
Q  188 tgcatctttggtccttttggtcaattttgacttattcaac 227  Q
    |||| ||||||||||||||  || ||||||| || |||||    
T  1034471 tgcaactttggtccttttgaccacttttgacctagtcaac 1034432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 11996739 - 11996837
Alignment:
Q  120 aaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgac 218  Q
    ||||| |||| |||||| |||| || |||||||||||||||||||    | |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  11996739 aaaaagttgcgattttgaccccctatgtacaaaaactacaattttagttctctaagatttaacccctttacatctttggtccttttggtcaattttgac 11996837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 26544203 - 26544278
Alignment:
Q  143 taagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgac 218  Q
    ||||||||||||||||| ||||  || ||||||||||||| ||||||||| ||||||||||||| |||||||||||    
T  26544203 taagtacaaaaactacagttttagcctcctaagatttagcacctttgcatatttggtccttttgatcaattttgac 26544278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 18868948 - 18869039
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtcctttt 205  Q
    |||||||||||||||||||||||||||| | ||| ||||||||||||||||||||  |||||||| ||||| | ||| ||||||||||| ||||    
T  18868948 taactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaattttga-tccctaaga-ttagctcatttacatctttggtcttttt 18869039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 21837109 - 21837178
Alignment:
Q  158 caattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
    |||||||| ||||  || ||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  21837109 caattttggcccctaaaaatttagcccctttgcatctttggtcattttgatcaattttgacttattcaac 21837178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 219
Target Start/End: Complemental strand, 11938891 - 11938759
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        |||||||||||||||||||||||||| | | |||||||||||| || ||||||| |||||||||| ||||| |     
T  11938891 taggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagtacaaaaa-tataattttgcccccctaagaattagctct 11938793  T
Q  186 tttgcatctttggtccttttggtcaattttgact 219  Q
    ||||||  |||| || |||| | |||||||||||    
T  11938792 tttgcaattttgatcatttttgccaattttgact 11938759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 13568000 - 13568073
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgca 191  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||| |||  || | ||||||||||||||    
T  13568000 tttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttgatccc--aaaaattagcccctttgca 13568073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 24476920 - 24476863
Alignment:
Q  113 aactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgacccc 170  Q
    |||||| ||||||||| |||||||| ||| ||||||||||||||||||||||||||||    
T  24476920 aacttttaaaaacttgtaattttggtcccctaagtacaaaaactacaattttgacccc 24476863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 32739710 - 32739781
Alignment:
Q  147 tacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgac 218  Q
    ||||||||||||||||||| |||| |||||||||| |  ||| |||||||||||| ||||| ||||||||||    
T  32739710 tacaaaaactacaattttggccccttaagatttagtcattttccatctttggtccatttggccaattttgac 32739781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 1033234 - 1033327
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttg 206  Q
    ||||||| |||||||||||||||||||||| ||| ||| |||| || |||||   ||| ||||||||||||||| ||||| |||||||| |||||    
T  1033234 taacttttaaaaacttgcaattttggcccc-taaataccaaaattataatttaacccctctaagatttagccccattgcaactttggtcattttg 1033327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 22067823 - 22067745
Alignment:
Q  148 acaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaa 226  Q
    |||||||||||||||||  |||||||  ||||| || ||| ||| ||||| ||||||||||||||||||||||| ||||    
T  22067823 acaaaaactacaattttagccccctataatttaccctcttcgcaactttgatccttttggtcaattttgacttagtcaa 22067745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 16446177 - 16446257
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgca 191  Q
    |||||||||||||||||||||||||  || | ||| ||||||||||||||||||||  ||| |||| ||| ||| ||||||    
T  16446177 ttaactttcaaaaacttgcaattttaacctcataaatacaaaaactacaattttgataccccaagaattaacccatttgca 16446257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 227
Target Start/End: Original strand, 1410060 - 1410139
Alignment:
Q  148 acaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaac 227  Q
    |||||||  |||||||||  ||||||||||||||||  |||||| ||||  ||||||| ||||| |||||||||||||||    
T  1410060 acaaaaatgacaattttggtcccctaagatttagcctatttgcaactttaatcctttttgtcaactttgacttattcaac 1410139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 8534605 - 8534713
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||| |||||||||||| ||||||||  || ||||||| | ||||||||||||||  |||| |||| |||||| |||||||    | ||||||| |||||    
T  8534605 ttaattttcaaaaacttacaattttgatcctttaagtatagaaactacaattttggtcccc-aagaattagcctctttgcaatagtagtcctttaggtca 8534703  T
Q  211 attttgactt 220  Q
    ||||||||||    
T  8534704 attttgactt 8534713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 1093188 - 1093144
Alignment:
Q  147 tacaaaaactacaattttgaccccctaagatttagcccctttgca 191  Q
    |||||||| ||||||||| |||| |||||||||||||||||||||    
T  1093188 tacaaaaattacaattttaacccgctaagatttagcccctttgca 1093144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 5819791 - 5819721
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttag 181  Q
    |||| ||||||||| |||| ||||||||||| || | |||||||||||||| |||| ||| ||||| ||||    
T  5819791 ttaagtttcaaaaagttgcgattttggccccatatgaacaaaaactacaatcttgatcccttaagaattag 5819721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 142
Target Start/End: Original strand, 21837092 - 21837122
Alignment:
Q  112 taactttcaaaaacttgcaattttggcccct 142  Q
    |||||||||||||||||||||||||||||||    
T  21837092 taactttcaaaaacttgcaattttggcccct 21837122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 146
Target Start/End: Complemental strand, 21837332 - 21837298
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaag 146  Q
    |||||||||||||||||||||||||||||| ||||    
T  21837332 taactttcaaaaacttgcaattttggccccctaag 21837298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 1091736 - 1091824
Alignment:
Q  129 caattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttga 217  Q
    ||||||||| ||  || ||| |||| |||||||||||||||| ||||||||||||  ||||||    ||||| |||| |||||||||||    
T  1091736 caattttggtcctctatgtataaaagctacaattttgaccccttaagatttagcctatttgcaatagtggtcatttttgtcaattttga 1091824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 19511 - 19627
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||| |||||||| ||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||| || |||||||||    
T  19511 ttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaattttgatcccctaagatttaacccctttgcatctttgatcattttggtca 19610  T
Q  211 attttgacttattcaac 227  Q
    |||||||||||||||||    
T  19611 attttgacttattcaac 19627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 89 - 218
Target Start/End: Complemental strand, 61559 - 61430
Alignment:
Q  89 gctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagccccttt 188  Q
    |||||||||||||||       |||| |||||||||||||||||||| ||||| ||||||||||||||| ||||||| ||||||| |||||||||| |||    
T  61559 gctaaagtgcacttttcctcccttaattttcaaaaacttgcaattttagccccctaagtacaaaaactataattttggccccctatgatttagccctttt 61460  T
Q  189 gcatctttggtccttttggtcaattttgac 218  Q
    ||||||||||||||||||||||||||||||    
T  61459 gcatctttggtccttttggtcaattttgac 61430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 60114 - 60220
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||||||||||||||| |||| || ||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  60114 taacttttaaaaacttgcaattttgaccccctatgtataaaaactacaattttgaccccctatgatttagcccctttgcatctttggtctttttggtcaa 60213  T
Q  212 ttttgac 218  Q
    |||||||    
T  60214 ttttgac 60220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 1463 - 1569
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||||||||||||||| |||| || ||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1463 taactttaaaaaacttgcaattttgaccccctatgtataaaaactataattttgaccccctaagatttagcccatttgcatctttggtccttttggtcaa 1562  T
Q  212 ttttgac 218  Q
    |||||||    
T  1563 ttttgac 1569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 49536 - 49404
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       |||||||| ||||| |||||||||||||||| ||   | ||||||||||||||||||||||||||||||||| ||    
T  49536 taggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctcc 49437  T
Q  186 tttgcatctttggtccttttggtcaattttgac 218  Q
    |||||| ||||||||||||||| ||||||||||    
T  49436 tttgcaactttggtccttttggccaattttgac 49404  T

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Target: scaffold0294 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 5541 - 5409
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||        ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  5541 taggctaaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttgcccccttaagatttagcccc 5442  T
Q  186 tttgcatctttggtccttttggtcaattttgac 218  Q
     || ||  |||| |||||||||| |||||||||    
T  5441 attacaaatttgatccttttggttaattttgac 5409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 4470 - 4572
Alignment:
Q  116 tttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 215  Q
    |||||||||||| ||||||| |||||||||||||||||| |||||||||  |||||||| |||||||||| || ||  ||||||| |||||||| |||||    
T  4470 tttcaaaaacttacaattttagccccttaagtacaaaaattacaattttacccccctaaaatttagccccattacaaatttggtcattttggtcgatttt 4569  T
Q  216 gac 218  Q
    |||    
T  4570 gac 4572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 17468 - 17573
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       |||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||| ||||    
T  17468 taggctaaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccccaagaattatcccc 17567  T
Q  186 tttgca 191  Q
    ||||||    
T  17568 tttgca 17573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 18853 - 18747
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| ||||| |||||||||||| ||| || |||||||||||| ||||||| |||| ||| |||||||||| ||||| ||||  || ||||||||||    
T  18853 taacttttaaaaatttgcaattttggtcccctaggtacaaaaactataattttggccccttaaaatttagccccattgcaactttaatcattttggtcaa 18754  T
Q  212 ttttgac 218  Q
    |||||||    
T  18753 ttttgac 18747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 1056 - 949
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||||| ||||| |||||||||||| |||||| |||||||||||| ||||||| ||||| |||| ||||||||||||||| ||||||||||||   ||    
T  1056 ttaacttttaaaaagttgcaattttggtcccttatgtacaaaaactataattttggccccccaagaattagcccctttgcatatttggtcctttttccca 957  T
Q  211 attttgac 218  Q
    ||||||||    
T  956 attttgac 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 88 - 218
Target Start/End: Original strand, 233 - 363
Alignment:
Q  88 ggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctt 187  Q
    ||||||||||||||||       |||||||||||||| |||||||||||| ||| || |||||||||||| |||||||  ||||||||| ||||||||||    
T  233 ggctaaagtgcactttcccccccttaactttcaaaaagttgcaattttggtcccctatgtacaaaaactataattttggtcccctaagaattagcccctt 332  T
Q  188 tgcatctttggtccttttggtcaattttgac 218  Q
    ||||| |||| |||||||   ||||||||||    
T  333 tgcatatttgatcctttttcccaattttgac 363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 6366 - 6461
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttg 206  Q
    |||| ||||||||| || | ||||| ||||| || ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  6366 ttaagtttcaaaaagttacgattttagccccctatgtacaaaaactacaattttgaccccctaagatttagcctttttgcatctttggtccttttg 6461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 222
Target Start/End: Complemental strand, 9128 - 8994
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccc 185  Q
    ||||||||||||||||||       |||| ||||||||| |||  ||||| ||| | || |||||||||||||||||||| |||| |||||||||||||     
T  9128 taggctaaagtgcactttttcctccttaa-tttcaaaaagttgtgatttttgcctcctatgtacaaaaactacaattttggcccc-taagatttagccct 9031  T
Q  186 tttgcatctttggtccttttggtcaattttgacttat 222  Q
      |||||||||| ||||||||  ||||||||||||||    
T  9030 catgcatctttgatccttttgaccaattttgacttat 8994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 114 - 215
Target Start/End: Complemental strand, 3383 - 3282
Alignment:
Q  114 actttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaatt 213  Q
    |||||||||||||| |||||||| |||| || |||||||||||| |||||||  |||||||||||||||||||||||| ||||| ||||||| | |||||    
T  3383 actttcaaaaacttacaattttgaccccataggtacaaaaactataattttggtcccctaagatttagcccctttgcaactttgatcctttttgccaatt 3284  T
Q  214 tt 215  Q
    ||    
T  3283 tt 3282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 3699 - 3806
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    |||||||||||||||||||||||||||||| | |||| | |||||| ||||||   |||||||||||||||| | ||||| ||||  || ||||||||||    
T  3699 taactttcaaaaacttgcaattttggccccctgagtaaagaaactataattttagtcccctaagatttagccgcattgcaactttaatctttttggtcaa 3798  T
Q  212 ttttgact 219  Q
    ||||||||    
T  3799 ttttgact 3806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 4807 - 4701
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||| |||||| ||||||||||||||| ||| |||| |||||||||||||||||| ||||  ||||||||| ||||| ||||  ||||||||  |||    
T  4807 taacttttaaaaacatgcaattttggccccctaaatacagaaactacaattttgaccctctaaattttagccccattgcaactttaatccttttgaccaa 4708  T
Q  212 ttttgac 218  Q
    |||||||    
T  4707 ttttgac 4701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 7473 - 7394
Alignment:
Q  131 attttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    |||||| |||| || ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||    
T  7473 attttgaccccctatgtacagaaactacaattttgaccccctaagatttagcccctttgcaactttgatccttttagtca 7394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 7957 - 7882
Alignment:
Q  151 aaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaa 226  Q
    ||||||| |||||| |||||||| ||||||||||||||||| ||||| ||||||||| ||||||||||||| ||||    
T  7957 aaaactagaattttaaccccctatgatttagcccctttgcaactttgatccttttggccaattttgacttagtcaa 7882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 218
Target Start/End: Original strand, 48334 - 48436
Alignment:
Q  113 aactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaat 212  Q
    |||| |||||||||||||||||  | ||| || |||||||||||| |||||||  |||||||||||||  ||||||||||||||||||| ||||||||||    
T  48334 aactctcaaaaacttgcaattt--gacccctatgtacaaaaactataattttggtcccctaagatttattccctttgcatctttggtcc-tttggtcaat 48430  T
Q  213 tttgac 218  Q
    ||||||    
T  48431 tttgac 48436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 49162 - 49109
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaatttt 164  Q
    |||||||| |||||||||||||||||||| | ||||||  ||||||||||||||    
T  49162 ttaacttttaaaaacttgcaattttggcctcctaagtattaaaactacaatttt 49109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 227
Target Start/End: Original strand, 37179 - 37286
Alignment:
Q  120 aaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaattttgact 219  Q
    ||||| ||||||||||| |||| ||||||||||||| ||||||||| ||||||| ||||||||||| ||| |  |||  || |||||||||||||||||     
T  37179 aaaaatttgcaattttgaccccctaagtacaaaaacaacaattttggccccctacgatttagccccattgaaaatttcatcattttggtcaattttgacc 37278  T
Q  220 tattcaac 227  Q
    || |||||    
T  37279 tagtcaac 37286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 2543 - 2436
Alignment:
Q  112 taactttcaaaaa-cttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||||||||||| |||||||||||| |||| ||||||||||||| || |||||| ||||||| ||||||||  | |||||  |||  ||||||||||||    
T  2543 taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagctacattgcaaatttcatccttttggtca 2444  T
Q  211 attttgac 218  Q
    ||||||||    
T  2443 attttgac 2436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 7166 - 7059
Alignment:
Q  112 taactttcaaaaa-cttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtca 210  Q
    ||||||||||||| |||||||||||| |||| ||||||||||||| || |||||| ||||||| ||||||||  | |||||  |||  ||||||||||||    
T  7166 taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagctacattgcaaatttcatccttttggtca 7067  T
Q  211 attttgac 218  Q
    ||||||||    
T  7066 attttgac 7059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 23103 - 23210
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||||||||||||||| |||  ||||||| ||||| ||||| |||  |||||||| ||||||||| |||||  |||  || ||||| ||||    
T  23103 taactttcaaaaacttgcaattttgtccctctaagtaccaaaacaacaatcttgctcccctaagctttagccccattgcaaattttatcattttgctcaa 23202  T
Q  212 ttttgact 219  Q
    ||||||||    
T  23203 ttttgact 23210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 23993 - 23860
Alignment:
Q  86 taggctaaagtgcactttnnnnnnnttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaa-ttttgaccccctaagatttagccc 184  Q
    ||||||||||||||||||        ||||||||||||||||||||||||||| || ||| ||  ||||| |||| ||||  |||  || ||||||||||    
T  23993 taggctaaagtgcacttttttctccctaactttcaaaaacttgcaattttggctccctaaatatcaaaacaacaacttttccccctataggatttagccc 23894  T
Q  185 ctttgcatctttggtccttttggtcaattttgac 218  Q
    | |||||  |||  |||||||| |||||||||||    
T  23893 cattgcaaattttatccttttgatcaattttgac 23860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 18751 - 18828
Alignment:
Q  111 ttaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagccccttt 188  Q
    |||||||| ||||| |||| |||||| || | || | ||||||||||||||||||||| ||||||| ||| |||||||    
T  18751 ttaacttttaaaaagttgcgattttgacctcctatgaacaaaaactacaattttgacctcctaagaattaaccccttt 18828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 217
Target Start/End: Complemental strand, 196 - 91
Alignment:
Q  112 taactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggtcaa 211  Q
    ||||||||||||  |||| |||||||||||  | |||  ||||| ||||||||| ||||||| | ||||||||| |||||  ||  |||||||||| |||    
T  196 taactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccccattgcagtttcagtccttttgggcaa 97  T
Q  212 ttttga 217  Q
    ||||||    
T  96 ttttga 91  T

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