View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19727_low_54 (Length: 203)

Name: NF19727_low_54
Description: NF19727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19727_low_54
NF19727_low_54
[»] chr1 (63 HSPs)
chr1 (80-193)||(5442486-5442600)
chr1 (1-80)||(5442372-5442451)
chr1 (3-80)||(5040572-5040649)
chr1 (3-80)||(21304418-21304495)
chr1 (1-80)||(3555552-3555631)
chr1 (1-80)||(28839371-28839450)
chr1 (1-80)||(32348250-32348329)
chr1 (2-80)||(17342861-17342939)
chr1 (3-80)||(45889245-45889322)
chr1 (8-80)||(8773281-8773353)
chr1 (1-80)||(50267435-50267514)
chr1 (1-72)||(51749188-51749259)
chr1 (2-80)||(28277035-28277113)
chr1 (2-80)||(34813950-34814028)
chr1 (1-78)||(13500728-13500805)
chr1 (3-72)||(36784348-36784417)
chr1 (3-80)||(42926168-42926245)
chr1 (3-80)||(46496052-46496129)
chr1 (3-80)||(46536374-46536451)
chr1 (1-80)||(17724711-17724790)
chr1 (5-80)||(19532916-19532991)
chr1 (1-80)||(27831878-27831957)
chr1 (1-80)||(36467192-36467271)
chr1 (17-80)||(49944980-49945043)
chr1 (2-72)||(8327750-8327820)
chr1 (2-80)||(48242587-48242665)
chr1 (2-79)||(26756009-26756086)
chr1 (2-79)||(43895880-43895957)
chr1 (3-80)||(49494160-49494237)
chr1 (1-60)||(52830431-52830490)
chr1 (2-80)||(27391380-27391458)
chr1 (2-72)||(32587798-32587868)
chr1 (2-80)||(34877087-34877165)
chr1 (2-80)||(52432345-52432423)
chr1 (3-44)||(948620-948661)
chr1 (2-80)||(7785269-7785349)
chr1 (3-80)||(30749965-30750042)
chr1 (3-80)||(30771416-30771493)
chr1 (5-62)||(30903242-30903299)
chr1 (18-80)||(10370182-10370244)
chr1 (26-80)||(28908144-28908198)
chr1 (1-80)||(51848689-51848770)
chr1 (1-61)||(5563046-5563105)
chr1 (14-78)||(7787707-7787771)
chr1 (2-62)||(45305886-45305946)
chr1 (1-80)||(16040109-16040188)
chr1 (2-80)||(3718846-3718924)
chr1 (10-60)||(6787288-6787338)
chr1 (3-60)||(38664435-38664492)
chr1 (2-61)||(27932849-27932908)
chr1 (1-60)||(29225425-29225484)
chr1 (1-52)||(29756167-29756218)
chr1 (80-115)||(52432458-52432493)
chr1 (2-80)||(33149306-33149384)
chr1 (1-55)||(34332140-34332194)
chr1 (2-80)||(37925243-37925321)
chr1 (2-80)||(46880448-46880526)
chr1 (2-79)||(2571396-2571472)
chr1 (3-80)||(4659465-4659542)
chr1 (1-34)||(29225785-29225818)
chr1 (2-34)||(2886204-2886236)
chr1 (2-62)||(19349010-19349069)
chr1 (2-34)||(31798451-31798483)
[»] chr5 (55 HSPs)
chr5 (3-80)||(35646086-35646163)
chr5 (1-80)||(42575635-42575714)
chr5 (2-80)||(8369693-8369771)
chr5 (1-80)||(8692815-8692894)
chr5 (1-80)||(11099474-11099553)
chr5 (1-80)||(33988232-33988311)
chr5 (2-80)||(3725219-3725297)
chr5 (2-80)||(16283584-16283662)
chr5 (1-80)||(7613739-7613818)
chr5 (1-80)||(35334523-35334602)
chr5 (1-80)||(22582869-22582947)
chr5 (2-80)||(17242951-17243029)
chr5 (2-80)||(24231043-24231121)
chr5 (2-80)||(39183624-39183702)
chr5 (1-80)||(25814396-25814475)
chr5 (1-80)||(33012386-33012465)
chr5 (2-80)||(858368-858446)
chr5 (3-57)||(6735377-6735431)
chr5 (2-80)||(15254798-15254876)
chr5 (2-80)||(36446684-36446762)
chr5 (1-80)||(39008160-39008243)
chr5 (3-80)||(6610871-6610948)
chr5 (3-80)||(7311177-7311254)
chr5 (3-80)||(36469091-36469168)
chr5 (2-80)||(42211366-42211440)
chr5 (3-47)||(13135787-13135831)
chr5 (2-80)||(20189925-20190003)
chr5 (3-62)||(26330282-26330341)
chr5 (2-80)||(35585613-35585691)
chr5 (80-125)||(42575555-42575600)
chr5 (1-61)||(4475278-4475338)
chr5 (1-80)||(16926088-16926167)
chr5 (2-80)||(6172977-6173055)
chr5 (10-80)||(17935264-17935334)
chr5 (2-52)||(25344763-25344813)
chr5 (24-82)||(32539717-32539775)
chr5 (1-79)||(36006890-36006968)
chr5 (2-55)||(9426574-9426627)
chr5 (1-61)||(39212566-39212627)
chr5 (80-124)||(8369618-8369662)
chr5 (1-61)||(43573038-43573098)
chr5 (6-73)||(4576414-4576480)
chr5 (1-80)||(5357814-5357893)
chr5 (1-80)||(35988666-35988744)
chr5 (1-80)||(39060419-39060498)
chr5 (1-55)||(4044499-4044553)
chr5 (2-80)||(15898224-15898302)
chr5 (3-73)||(16883935-16884005)
chr5 (6-80)||(35666922-35666996)
chr5 (3-49)||(39060982-39061028)
chr5 (3-52)||(5147521-5147570)
chr5 (1-34)||(13016406-13016439)
chr5 (89-125)||(8692734-8692770)
chr5 (2-34)||(13087784-13087816)
chr5 (4-80)||(42818938-42819014)
[»] chr7 (53 HSPs)
chr7 (1-80)||(7425873-7425953)
chr7 (1-80)||(11616593-11616673)
chr7 (2-80)||(37490614-37490692)
chr7 (1-80)||(2846672-2846751)
chr7 (1-80)||(29257579-29257658)
chr7 (1-80)||(33584595-33584674)
chr7 (1-80)||(38181870-38181949)
chr7 (2-80)||(29434576-29434654)
chr7 (2-80)||(46095416-46095494)
chr7 (3-80)||(5724704-5724780)
chr7 (2-61)||(21387495-21387554)
chr7 (2-80)||(36117694-36117773)
chr7 (2-80)||(30463049-30463127)
chr7 (3-80)||(2842048-2842125)
chr7 (6-79)||(47454041-47454114)
chr7 (8-80)||(23058858-23058929)
chr7 (1-80)||(17266059-17266138)
chr7 (6-80)||(44604474-44604547)
chr7 (1-71)||(49100507-49100577)
chr7 (2-79)||(34001856-34001933)
chr7 (9-61)||(18235230-18235282)
chr7 (2-60)||(31581459-31581517)
chr7 (2-80)||(33774040-33774117)
chr7 (2-79)||(27234536-27234613)
chr7 (2-54)||(46288453-46288505)
chr7 (1-80)||(32776015-32776094)
chr7 (2-80)||(34963804-34963885)
chr7 (2-80)||(23703949-23704027)
chr7 (80-125)||(7425793-7425838)
chr7 (3-52)||(23186167-23186216)
chr7 (2-57)||(1643357-1643412)
chr7 (14-73)||(28923232-28923291)
chr7 (5-60)||(40590841-40590896)
chr7 (1-80)||(48981688-48981767)
chr7 (2-80)||(19687992-19688070)
chr7 (2-80)||(34064248-34064325)
chr7 (3-60)||(7456600-7456657)
chr7 (2-63)||(37496410-37496471)
chr7 (3-43)||(6591574-6591614)
chr7 (6-62)||(31549636-31549692)
chr7 (1-80)||(29997025-29997104)
chr7 (1-80)||(37264345-37264424)
chr7 (2-60)||(2849288-2849346)
chr7 (30-80)||(5083468-5083518)
chr7 (6-40)||(5083516-5083550)
chr7 (18-72)||(40038113-40038166)
chr7 (1-55)||(45218179-45218233)
chr7 (2-55)||(24288456-24288509)
chr7 (80-120)||(5083393-5083433)
chr7 (2-34)||(10355777-10355809)
chr7 (80-124)||(26938509-26938553)
chr7 (2-57)||(37157203-37157259)
chr7 (1-61)||(40803641-40803701)
[»] chr8 (61 HSPs)
chr8 (1-80)||(5392081-5392160)
chr8 (1-80)||(33190905-33190984)
chr8 (1-80)||(38252434-38252513)
chr8 (1-80)||(44790418-44790497)
chr8 (2-80)||(28802800-28802878)
chr8 (1-73)||(5962476-5962548)
chr8 (9-80)||(29730892-29730963)
chr8 (1-80)||(32241420-32241499)
chr8 (3-78)||(42558579-42558654)
chr8 (3-78)||(45425519-45425594)
chr8 (1-74)||(21587309-21587382)
chr8 (1-80)||(2349382-2349461)
chr8 (1-80)||(42412379-42412458)
chr8 (6-80)||(12957977-12958051)
chr8 (2-72)||(22324959-22325029)
chr8 (2-80)||(39171576-39171654)
chr8 (11-80)||(9014745-9014814)
chr8 (9-82)||(13084942-13085015)
chr8 (2-80)||(139055-139133)
chr8 (3-73)||(31410611-31410681)
chr8 (2-80)||(32967273-32967351)
chr8 (1-80)||(10728919-10728997)
chr8 (3-82)||(15559124-15559203)
chr8 (1-72)||(34133159-34133230)
chr8 (2-73)||(44615368-44615439)
chr8 (2-80)||(12653720-12653798)
chr8 (10-80)||(31132771-31132841)
chr8 (3-80)||(138695-138772)
chr8 (80-124)||(33190826-33190870)
chr8 (1-80)||(2195500-2195578)
chr8 (1-80)||(7258363-7258442)
chr8 (1-80)||(27973682-27973761)
chr8 (1-80)||(28030951-28031030)
chr8 (2-80)||(3384567-3384645)
chr8 (2-80)||(45197644-45197722)
chr8 (9-80)||(7042792-7042864)
chr8 (1-61)||(29615830-29615890)
chr8 (2-56)||(1230383-1230436)
chr8 (2-52)||(14748730-14748780)
chr8 (2-80)||(27868321-27868399)
chr8 (12-77)||(886652-886717)
chr8 (2-43)||(4274332-4274373)
chr8 (2-43)||(22490424-22490465)
chr8 (5-62)||(32472130-32472187)
chr8 (3-72)||(33746223-33746292)
chr8 (80-117)||(37219685-37219722)
chr8 (1-80)||(8618160-8618239)
chr8 (1-80)||(14689992-14690071)
chr8 (7-62)||(29567243-29567298)
chr8 (2-60)||(325132-325190)
chr8 (2-80)||(5878223-5878300)
chr8 (3-72)||(2119750-2119819)
chr8 (1-34)||(2797072-2797105)
chr8 (1-34)||(17005977-17006010)
chr8 (1-34)||(17571238-17571271)
chr8 (2-55)||(39416344-39416396)
chr8 (3-60)||(40077766-40077823)
chr8 (6-54)||(14953955-14954003)
chr8 (9-73)||(26677113-26677177)
chr8 (80-124)||(33925018-33925062)
chr8 (2-30)||(33925130-33925158)
[»] chr6 (18 HSPs)
chr6 (1-80)||(31265811-31265890)
chr6 (1-80)||(3604596-3604675)
chr6 (1-80)||(15081455-15081534)
chr6 (2-80)||(7301076-7301154)
chr6 (2-80)||(14312644-14312722)
chr6 (1-73)||(30063952-30064024)
chr6 (2-73)||(4238454-4238525)
chr6 (3-58)||(34915831-34915886)
chr6 (2-80)||(14306237-14306315)
chr6 (2-80)||(117112-117190)
chr6 (1-80)||(15371860-15371938)
chr6 (2-80)||(9755143-9755221)
chr6 (1-80)||(33921465-33921544)
chr6 (2-80)||(33109406-33109484)
chr6 (1-60)||(33017960-33018019)
chr6 (3-80)||(26356303-26356380)
chr6 (5-46)||(29444042-29444083)
chr6 (2-34)||(15321267-15321299)
[»] chr4 (69 HSPs)
chr4 (1-76)||(18849759-18849834)
chr4 (2-80)||(4360404-4360482)
chr4 (2-80)||(54729480-54729558)
chr4 (2-78)||(42544242-42544318)
chr4 (2-80)||(17237076-17237154)
chr4 (2-80)||(27977180-27977258)
chr4 (3-80)||(49306621-49306698)
chr4 (1-80)||(9093758-9093837)
chr4 (1-80)||(33047524-33047603)
chr4 (1-80)||(39979812-39979891)
chr4 (1-80)||(41710140-41710219)
chr4 (2-80)||(41436514-41436592)
chr4 (2-80)||(22872382-22872462)
chr4 (2-79)||(50328068-50328145)
chr4 (2-74)||(39976392-39976464)
chr4 (1-80)||(283473-283552)
chr4 (5-80)||(28974342-28974417)
chr4 (1-80)||(42024197-42024276)
chr4 (1-80)||(49812261-49812340)
chr4 (2-80)||(41203770-41203848)
chr4 (2-80)||(49448874-49448952)
chr4 (2-73)||(3686044-3686115)
chr4 (5-80)||(8065569-8065644)
chr4 (1-80)||(8295061-8295140)
chr4 (2-80)||(1825242-1825322)
chr4 (2-80)||(30568692-30568774)
chr4 (2-78)||(50714615-50714691)
chr4 (1-80)||(16493294-16493371)
chr4 (2-80)||(38977024-38977103)
chr4 (2-80)||(26185215-26185293)
chr4 (2-80)||(37309731-37309809)
chr4 (2-80)||(42185792-42185870)
chr4 (2-72)||(43335027-43335097)
chr4 (3-53)||(48740554-48740604)
chr4 (8-80)||(31862828-31862900)
chr4 (5-72)||(18509877-18509944)
chr4 (2-53)||(29644388-29644439)
chr4 (2-80)||(26799212-26799290)
chr4 (2-72)||(34021070-34021140)
chr4 (2-52)||(51527451-51527501)
chr4 (3-56)||(44020782-44020835)
chr4 (1-36)||(1796282-1796317)
chr4 (1-44)||(43421332-43421375)
chr4 (2-60)||(14009650-14009708)
chr4 (10-80)||(21240934-21241004)
chr4 (1-79)||(25902459-25902537)
chr4 (2-52)||(36047124-36047174)
chr4 (2-80)||(38160148-38160226)
chr4 (2-79)||(39258266-39258346)
chr4 (3-60)||(6506128-6506185)
chr4 (3-60)||(25581324-25581381)
chr4 (3-80)||(27790416-27790493)
chr4 (3-60)||(32559197-32559254)
chr4 (1-58)||(51572246-51572303)
chr4 (80-124)||(16493215-16493259)
chr4 (8-60)||(35909589-35909641)
chr4 (3-71)||(47846933-47847000)
chr4 (2-52)||(38319944-38319994)
chr4 (1-34)||(8759811-8759844)
chr4 (1-34)||(25149483-25149516)
chr4 (3-80)||(29136785-29136862)
chr4 (2-55)||(39052922-39052975)
chr4 (1-34)||(42132845-42132878)
chr4 (20-72)||(4357618-4357670)
chr4 (80-124)||(18849676-18849720)
chr4 (2-34)||(22020552-22020584)
chr4 (1-57)||(37315941-37315997)
chr4 (12-60)||(40881208-40881256)
chr4 (2-34)||(53848679-53848711)
[»] chr2 (54 HSPs)
chr2 (1-80)||(3100432-3100511)
chr2 (2-73)||(23684992-23685063)
chr2 (1-80)||(44534479-44534558)
chr2 (2-80)||(2882018-2882096)
chr2 (2-80)||(5211954-5212032)
chr2 (2-80)||(28301467-28301545)
chr2 (1-79)||(28572240-28572318)
chr2 (2-82)||(435072-435152)
chr2 (1-80)||(18181209-18181288)
chr2 (2-72)||(7649979-7650049)
chr2 (2-80)||(28108371-28108449)
chr2 (10-80)||(33602222-33602292)
chr2 (2-80)||(37247880-37247958)
chr2 (15-80)||(565135-565200)
chr2 (1-80)||(28526996-28527075)
chr2 (1-80)||(30757564-30757643)
chr2 (3-80)||(8550638-8550715)
chr2 (3-80)||(36396454-36396531)
chr2 (8-80)||(31546014-31546086)
chr2 (1-80)||(28925844-28925923)
chr2 (2-72)||(41436112-41436182)
chr2 (3-80)||(11726718-11726795)
chr2 (3-72)||(24775812-24775881)
chr2 (2-80)||(8031774-8031852)
chr2 (3-80)||(10818655-10818732)
chr2 (3-80)||(36103297-36103374)
chr2 (1-72)||(2756706-2756777)
chr2 (2-80)||(10069581-10069659)
chr2 (2-44)||(39095664-39095706)
chr2 (2-80)||(43077722-43077800)
chr2 (7-73)||(44194684-44194750)
chr2 (80-125)||(28572353-28572398)
chr2 (5-80)||(33755293-33755368)
chr2 (1-55)||(1908515-1908569)
chr2 (2-80)||(43950444-43950522)
chr2 (2-79)||(6972537-6972614)
chr2 (2-34)||(4794606-4794638)
chr2 (2-53)||(13375212-13375264)
chr2 (10-57)||(3123687-3123734)
chr2 (80-119)||(5211880-5211919)
chr2 (3-80)||(15859341-15859415)
chr2 (1-72)||(20027154-20027225)
chr2 (1-52)||(43427110-43427161)
chr2 (2-80)||(2048325-2048403)
chr2 (1-55)||(9724910-9724964)
chr2 (2-80)||(16864931-16865008)
chr2 (30-80)||(36155574-36155624)
chr2 (2-79)||(314460-314537)
chr2 (3-80)||(6213846-6213923)
chr2 (2-55)||(7931517-7931570)
chr2 (1-34)||(26273791-26273824)
chr2 (2-79)||(44424261-44424337)
chr2 (1-33)||(12524325-12524357)
chr2 (2-62)||(19515914-19515974)
[»] chr3 (52 HSPs)
chr3 (1-80)||(26134699-26134778)
chr3 (1-80)||(9017833-9017912)
chr3 (1-80)||(43639512-43639591)
chr3 (1-80)||(54122220-54122299)
chr3 (2-80)||(5245445-5245523)
chr3 (2-80)||(39866549-39866627)
chr3 (2-80)||(54458305-54458383)
chr3 (4-80)||(17776990-17777066)
chr3 (4-80)||(19078291-19078367)
chr3 (5-72)||(33994693-33994760)
chr3 (2-80)||(11251123-11251201)
chr3 (1-79)||(21296500-21296578)
chr3 (2-80)||(36097651-36097729)
chr3 (3-80)||(32827300-32827377)
chr3 (2-73)||(32023104-32023175)
chr3 (3-80)||(1772102-1772180)
chr3 (2-80)||(10855027-10855105)
chr3 (2-72)||(14756118-14756188)
chr3 (1-80)||(46785975-46786056)
chr3 (2-80)||(48744292-48744370)
chr3 (2-80)||(52325210-52325288)
chr3 (2-80)||(53876432-53876510)
chr3 (2-62)||(22202403-22202463)
chr3 (1-80)||(2868606-2868685)
chr3 (3-80)||(54845512-54845589)
chr3 (1-80)||(41031604-41031686)
chr3 (1-73)||(54493940-54494012)
chr3 (3-62)||(11529125-11529184)
chr3 (1-80)||(15280637-15280715)
chr3 (1-80)||(26832103-26832182)
chr3 (1-80)||(54782995-54783074)
chr3 (2-80)||(55415435-55415513)
chr3 (1-78)||(45392122-45392199)
chr3 (2-62)||(39329764-39329824)
chr3 (1-80)||(44219031-44219108)
chr3 (2-76)||(15082035-15082109)
chr3 (20-62)||(26142950-26142992)
chr3 (3-52)||(12744848-12744897)
chr3 (9-78)||(8706190-8706255)
chr3 (9-78)||(9058077-9058142)
chr3 (4-80)||(46627921-46627997)
chr3 (1-55)||(1334802-1334856)
chr3 (1-47)||(1923122-1923168)
chr3 (2-80)||(9218178-9218255)
chr3 (3-77)||(29858864-29858938)
chr3 (1-43)||(37041906-37041948)
chr3 (2-72)||(44234123-44234193)
chr3 (1-62)||(42547120-42547181)
chr3 (3-56)||(53754084-53754137)
chr3 (2-34)||(46194248-46194280)
chr3 (3-55)||(51164986-51165038)
chr3 (80-108)||(54122157-54122185)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-73)||(229855-229927)
[»] scaffold0321 (1 HSPs)
scaffold0321 (11-80)||(9548-9617)
[»] scaffold0221 (1 HSPs)
scaffold0221 (2-59)||(8920-8977)
[»] scaffold0028 (1 HSPs)
scaffold0028 (2-58)||(26646-26702)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-52)||(26354-26405)
[»] scaffold0058 (1 HSPs)
scaffold0058 (2-80)||(14489-14567)
[»] scaffold0034 (1 HSPs)
scaffold0034 (2-80)||(98858-98936)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-80)||(230288-230367)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-60)||(352477-352536)
[»] scaffold0020 (1 HSPs)
scaffold0020 (3-80)||(171260-171337)
[»] scaffold0262 (1 HSPs)
scaffold0262 (3-77)||(12435-12509)
[»] scaffold0001 (1 HSPs)
scaffold0001 (2-60)||(394811-394869)


Alignment Details
Target: chr1 (Bit Score: 103; Significance: 2e-51; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 80 - 193
Target Start/End: Original strand, 5442486 - 5442600
Alignment:
Q  80 tgtgaaatgaaaaaa-tggctcagctaatttgggacggaggaagtaacttttaggtataattgattttgaaatagaatcaattataaagttgggagccaa 178  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5442486 tgtgaaatgaaaaaaatgactcagctaatttgggacggaggaagtaacttttaggtataattgattttgaaatagaatcaattataaagttgggagccaa 5442585  T
Q  179 acataacaatctgtg 193  Q
    |||||||||||||||    
T  5442586 acataacaatctgtg 5442600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 5442372 - 5442451
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5442372 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagataacttaaaaccattttt 5442451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 5040649 - 5040572
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||    
T  5040649 aattcaatatatttcacttcgcatttatgatagtggagaatgcatcaatacttaacaagatcacctaaaaccattttt 5040572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 21304418 - 21304495
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| |||||||    
T  21304418 aattcaatatatttcactttgcatttatgatagtcgagaatgcactgatacataacaagatcacttaaaatcattttt 21304495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3555631 - 3555552
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||  || ||||||||| || | |||||||||||||||||    
T  3555631 ccaattcaatatattccactttgcatttatgatagtggagaatagaccaatacttaaaaaaagcacttaaaaccattttt 3555552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 28839371 - 28839450
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||| || ||||||| ||||||    
T  28839371 ccaattcaatatattccactttgcatttatgatagtggagaatagaccaatacttaacaagagcatttaaaactattttt 28839450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 32348250 - 32348329
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||| |||||||||| |||  || |||||||||||||| |||||||||||||||||    
T  32348250 ccaattcaatatattccactttgcatttgtgatagtggaaaatagaccaatacttaacaagagcacttaaaaccattttt 32348329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 17342861 - 17342939
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| ||||||| |||||||||| |||||||||||| |||||||||||| | |||||||||||||||||    
T  17342861 caattcaatatatttcactttgtatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccattttt 17342939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 45889322 - 45889245
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||||||| ||||||||  || |||| ||||||||| |||||||||||||||||    
T  45889322 aattcaatatattccactttgcatttatgataatggagaatagaccaatagttaacaagagcacttaaaaccattttt 45889245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 8773281 - 8773353
Alignment:
Q  8 aatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||| ||||||    
T  8773281 aatatattccactttgcatatatgacagtggagaatgcaccaatacttaacaagagcacttaaaactattttt 8773353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 50267514 - 50267435
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| |||||| ||||||||||| |||||||||||| |||||||||||||  |||||||||| ||||||    
T  50267514 ccaattcaatatatttcactttacatttatgataatggagaatgcaccaatacttaacaagtgcacttaaaactattttt 50267435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 51749259 - 51749188
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    |||||||||||||||||||||||||||||||||| ||||||||  || |||||||||||||| |||||||||    
T  51749259 ccaattcaatatattccactttgcatttatgataatggagaataaaccaatacttaacaagaacacttaaaa 51749188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 28277113 - 28277035
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| |||||| ||||||||||| |||||||||||| |||||||||||||  |||||||||| ||||||    
T  28277113 caattcaatatatttcactttacatttatgatactggagaatgcaccaatacttaacaagtgcacttaaaactattttt 28277035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 34813950 - 34814028
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| ||||||||||||||||| ||   |||||||||||||||||||||| |||||||||| ||||||    
T  34813950 caattcaatatattctactttgcatttatgataatgataaatgcactaatacttaacaagaacacttaaaactattttt 34814028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13500805 - 13500728
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattt 78  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||| | ||||||||| |||||    
T  13500805 ccaattcaatattttccactttgcatttatgatagtgaagaatgcaccaatacataacaaaagcacttaaaatcattt 13500728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 36784348 - 36784417
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||| ||| |||||    
T  36784348 aattcaatatatttcactttgcatttatgatagtggaaaatgcacaaatacttaacaagagcacctaaaa 36784417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 42926168 - 42926245
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||| || ||||||||||||||||||||||||||||  ||||||||||| | ||||||||| |||||||    
T  42926168 aattcaatatatttcattttgcatttatgatagtggagaatgcaccgatacttaacaaaaacacttaaaatcattttt 42926245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 46496052 - 46496129
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||||||| |||||||| ||  ||| |||||||||| |||| ||||||||||||    
T  46496052 aattcaatatattccactttgcatttatgataatggagaatacatcaatccttaacaagaacactcaaaaccattttt 46496129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 46536374 - 46536451
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||| |||||||||||||||| ||||||||||||||||||| ||  |||| ||||||||| |||||||||||||||||    
T  46536374 aatttaatatattccactttgtatttatgatagtggagaatacaacaatatttaacaagagcacttaaaaccattttt 46536451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 17724790 - 17724711
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||| |||| |||||||||||||| ||||||||||||||  |||| ||||||||| |||||||||| ||||||    
T  17724790 ccaattcaataaattctactttgcatttatggtagtggagaatgcatcaataattaacaagagcacttaaaacaattttt 17724711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 19532991 - 19532916
Alignment:
Q  5 ttcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||| |||||| ||||||||||||||||||||| || |||||||||||||  |||||||||| ||||||    
T  19532991 ttcaatatatttcactttacatttatgatagtggagaatgaaccaatacttaacaagtacacttaaaactattttt 19532916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 27831878 - 27831957
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||| ||||||||||||||||||||| ||| |||||||| ||||||| |||||  |||||||||| ||||||    
T  27831878 ccaattcaatatcttccactttgcatttatgataatggtgaatgcaccaatacttgacaagggcacttaaaactattttt 27831957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 36467271 - 36467192
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| |||||| ||||||| |||||||||||| ||| |||||||||||||  |||||||||| ||||||    
T  36467271 ccaattcaatatatttcactttacatttatcatagtggagaatccaccaatacttaacaagtgcacttaaaactattttt 36467192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 49944980 - 49945043
Alignment:
Q  17 cactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||| | ||||||||| |||||||||||||| |||||||||||||||||    
T  49944980 cactttgcatttatgatagagaagaatgcacaaatacttaacaagagcacttaaaaccattttt 49945043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 8327750 - 8327820
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    ||||||||||||||||| |||||||||||||||| |||||||  || |||||||||||||| |||||||||    
T  8327750 caattcaatatattccattttgcatttatgataggggagaatagaccaatacttaacaagagcacttaaaa 8327820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 48242665 - 48242587
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||  |||||||| ||||  |||||||||| ||||||    
T  48242665 caattcaatatattccactttacatttatgatagtggaggatgcatcaatacttatcaagtgcacttaaaactattttt 48242587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 26756009 - 26756086
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatttt 79  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||  |||||||||||||  |||||||||| |||||    
T  26756009 caattcaatatattacactttatatttatgatagtggagaatgcatcaatacttaacaagtgcacttaaaactatttt 26756086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 43895880 - 43895957
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatttt 79  Q
    ||||||||||||||| |||||||||||||||||||||||||  ||| |||||||||||| | ||| |||||| |||||    
T  43895880 caattcaatatattcaactttgcatttatgatagtggagaacacaccaatacttaacaaaaacacataaaactatttt 43895957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 49494237 - 49494160
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||| ||||||||||||||||||||  || |||| ||||||||  |||||||||| ||||||    
T  49494237 aattcaatatattccactttacatttatgatagtggagaattgaccaatatttaacaagtgcacttaaaactattttt 49494160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 52830490 - 52830431
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaa 60  Q
    |||||| ||||||||||||||| |||||||||||||||| ||||||| ||||||||||||    
T  52830490 ccaattgaatatattccactttacatttatgatagtggaaaatgcaccaatacttaacaa 52830431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 27391380 - 27391458
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||||| | |  |||| || ||||||||| |||| ||||||||| |||||||    
T  27391380 caattcaatatattccactttgcatttatgataatagtaaatgaaccaatacttaataagagcacttaaaatcattttt 27391458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 32587798 - 32587868
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    |||||||||||||| |||||||||||||||||| |||| ||||||  |||||||||||| | |||||||||    
T  32587798 caattcaatatatttcactttgcatttatgataatggaaaatgcatcaatacttaacaaaaacacttaaaa 32587868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 34877165 - 34877087
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| ||||||||||||||||| | || ||||||| |||| ||||| ||| |||||||||| ||||||    
T  34877165 caattcaatatattcaactttgcatttatgataatagaaaatgcacgaatatttaaccagagcacttaaaacaattttt 34877087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 52432345 - 52432423
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| |||||| |||||||| ||||  ||||||||  |||||||||||||| ||||||||| |||||||    
T  52432345 caattcaatatatttcactttacatttatggtagtaaagaatgcatcaatacttaacaagagcacttaaaatcattttt 52432423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 948661 - 948620
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  948661 aattcaatatattccactttgcatttatgatagtggagaatg 948620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 7785349 - 7785269
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatact--taacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| |||||| |||||||||||||||||||||||  ||||||  |||||| | |||||||||| ||||||    
T  7785349 caattcaatatatttcactttacatttatgatagtggagaatgcatcaatacttataacaataacacttaaaactattttt 7785269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 30749965 - 30750042
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||| ||||||||||||||||||||| |||||| ||  |||| ||||||| | |||||||||| ||||||    
T  30749965 aattcaatatataccactttgcatttatgatagtagagaatacatcaatatttaacaaaagcacttaaaactattttt 30750042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 30771416 - 30771493
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||| ||||||||||||||||||||| |||||| ||  |||| ||||||| | |||||||||| ||||||    
T  30771416 aattcaatatataccactttgcatttatgatagtagagaatacatcaatatttaacaaaagcacttaaaactattttt 30771493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 30903299 - 30903242
Alignment:
Q  5 ttcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaaga 62  Q
    |||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||||||    
T  30903299 ttcaatatattctactttgcatttatgataatggaaaatgcacaaatacttaacaaga 30903242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 10370244 - 10370182
Alignment:
Q  18 actttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||| ||| |||||||| ||||||||||||| | |||||||||| ||||||    
T  10370244 actttgcatttatgatggtgaagaatgcattaatacttaacaaaagcacttaaaactattttt 10370182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 28908144 - 28908198
Alignment:
Q  26 tttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||| ||||||||||||||||||||||||||||||||  |||||||| |||||||    
T  28908144 tttaagatagtggagaatgcactaatacttaacaagagtacttaaaatcattttt 28908198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 51848770 - 51848689
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcacta--atacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||| |  ||| ||||||| | |||||||||| ||||||    
T  51848770 ccaattcaatatattccactttatatttatgatagtggagaatacaccaatatatttaacaatagcacttaaaactattttt 51848689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5563046 - 5563105
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaag 61  Q
    |||||||||||| ||||||||| ||||||||||| | |||||||||| |||||||||||||    
T  5563046 ccaattcaatatgttccactttacatttatgataat-gagaatgcacaaatacttaacaag 5563105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 7787707 - 7787771
Alignment:
Q  14 ttccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattt 78  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||||||   ||||||||| ||||    
T  7787707 ttccactttacatttatgatagtggagaatacaccaatacttaacaagtgtacttaaaactattt 7787771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 45305886 - 45305946
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaaga 62  Q
    ||||||||||||||| ||||||||||||||||| || ||||||||  ||||||| ||||||    
T  45305886 caattcaatatattctactttgcatttatgataatgaagaatgcataaatacttgacaaga 45305946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 16040109 - 16040188
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||| |||||||||| ||||| |||||||||||  | |||||| || ||||||||||||   |||||||||||||||||    
T  16040109 ccaatacaatatattctactttacatttatgataaagaagaatgaaccaatacttaacaaagacacttaaaaccattttt 16040188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 3718924 - 3718846
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||  ||||| ||||||||||| ||   ||||||| ||||||| |||||| |||||||||| ||||||    
T  3718924 caattcaatatattatactttacatttatgataatgataaatgcacaaatacttgacaagagcacttaaaactattttt 3718846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 6787288 - 6787338
Alignment:
Q  10 tatattccactttgcatttatgatagtggagaatgcactaatacttaacaa 60  Q
    ||||||||||||| |||||||||||||||| |||| ||||||| |||||||    
T  6787288 tatattccactttacatttatgatagtggataatgtactaatatttaacaa 6787338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 38664435 - 38664492
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaa 60  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||   ||||||||||    
T  38664435 aattcaatatattcaattttgcatttatgatagtagagaatgcaccggtacttaacaa 38664492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 27932908 - 27932849
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaag 61  Q
    ||||||||||||||| |||||||||||||||||  | ||||||||| |||| || |||||    
T  27932908 caattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgacaag 27932849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29225484 - 29225425
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaa 60  Q
    |||||||||||||||| ||||| |||||||||||    ||||||||| ||||||||||||    
T  29225484 ccaattcaatatattctactttccatttatgataaaaaagaatgcaccaatacttaacaa 29225425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 29756218 - 29756167
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaata 52  Q
    |||||||||||||||| |||||||||||||||||  | ||||||||| ||||    
T  29756218 ccaattcaatatattctactttgcatttatgataaagaagaatgcaccaata 29756167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 115
Target Start/End: Original strand, 52432458 - 52432493
Alignment:
Q  80 tgtgaaatgaaaaaatggctcagctaatttgggacg 115  Q
    ||||||| ||||||||||||||||||||||||||||    
T  52432458 tgtgaaaagaaaaaatggctcagctaatttgggacg 52432493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 33149306 - 33149384
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| |||||||||||||||||  | ||||| ||| |||| |||| |||  |||| ||| ||||||||    
T  33149306 caattcaatatattctactttgcatttatgataaagaagaatccaccaataattaataaggacactcaaatccattttt 33149384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34332140 - 34332194
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatactt 55  Q
    ||||||||| ||  |||| ||||||||||||||| ||| ||||||||||||||||    
T  34332140 ccaattcaacatcctccattttgcatttatgataatggtgaatgcactaatactt 34332194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 37925321 - 37925243
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| |||||||||||||||||  | | ||||||| |||| || | |||| |||| |||| |||||||    
T  37925321 caattcaatatattctactttgcatttatgataaagaaaaatgcaccaataattgataagagcactaaaaatcattttt 37925243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 46880448 - 46880526
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||| ||||||||| ||||| |||||||||||||||||||  |||  |||||||| |||| | || |||| |||||||    
T  46880448 caatttaatatattcaactttacatttatgatagtggagaagacaccgatacttaataagagctctcaaaatcattttt 46880526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 2571396 - 2571472
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatttt 79  Q
    ||||||||||||||| |||||||||||| ||||    | ||||||| |||||||||||||| |||| ||||| |||||    
T  2571396 caattcaatatattctactttgcatttaggataagaaataatgcaccaatacttaacaaga-cactcaaaactatttt 2571472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 4659465 - 4659542
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| ||||||| ||| ||||  |||  ||||||  ||||||| |||||| |||||||||| ||||||    
T  4659465 aattcaatatattctactttgcgtttgtgattatggtaaatgcaaaaatacttcacaagagcacttaaaactattttt 4659542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29225785 - 29225818
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgata 34  Q
    |||||||||||||||| |||||||||||||||||    
T  29225785 ccaattcaatatattctactttgcatttatgata 29225818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 2886204 - 2886236
Alignment:
Q  2 caattcaatatattccactttgcatttatgata 34  Q
    ||||||||||||||| |||||||||||||||||    
T  2886204 caattcaatatattctactttgcatttatgata 2886236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 19349069 - 19349010
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaaga 62  Q
    ||||||||||||||| | ||||||||||||||| | | |||||||| ||||||| ||||||    
T  19349069 caattcaatatattctattttgcatttatgataattg-gaatgcaccaatacttgacaaga 19349010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 31798451 - 31798483
Alignment:
Q  2 caattcaatatattccactttgcatttatgata 34  Q
    ||||||||||||||| |||||||||||||||||    
T  31798451 caattcaatatattctactttgcatttatgata 31798483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 9e-32; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 35646163 - 35646086
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  35646163 aattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaacaagatcacttaaaatcattttt 35646086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 42575714 - 42575635
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||||    
T  42575714 ccaattcaatatattccactttgcatttatgatagtggagaatacaccaatacttaccaagagcacttaaaaccattttt 42575635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 8369771 - 8369693
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||| ||||||    
T  8369771 caattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaacaagagcatttaaaacaattttt 8369693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 8692894 - 8692815
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||| |||||||| || |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  8692894 ccaatttaatatatttcattttgcatttatgatagtggagaatgcaccaatacttaacaagaacacttaaaaccattttt 8692815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 11099553 - 11099474
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| | |||||||||| ||||||    
T  11099553 ccaattcaatatattccactttgtatttatgatagtggagaatgcaccaatacttaacaaaaacacttaaaactattttt 11099474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 33988232 - 33988311
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||| | |||||||||||||||||    
T  33988232 ccaattcaatatattccactttacatttatgatagtggagaatacaccaatacttaacaaaaacacttaaaaccattttt 33988311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 3725219 - 3725297
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  3725219 caattcgatatattccactatgcatttatgatagtggagaatgcaccaatacttaacaatagcacttaaaaccattttt 3725297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 16283662 - 16283584
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||| |||| ||||||||||||||    
T  16283662 caattcaatatattccactttgcatttatgatagttgagaatgcaccaatacataacaaaatcatttaaaaccattttt 16283584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 7613739 - 7613818
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||||||    
T  7613739 ccaattcaatatatttcactttacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaactattttt 7613818  T

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Target: chr5; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 35334602 - 35334523
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||  || ||||||||| |||| |||||||||| ||||||    
T  35334602 ccaattcaatatattccactttgcatttatgatagtggagaatagacaaatacttaataagagcacttaaaactattttt 35334523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 22582947 - 22582869
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||| |||||||||||||||||||||||||||||||||  | |||||||||||| ||||||||| |||||||    
T  22582947 ccaattcaatat-ttccactttgcatttatgatagtggagaatgcatcattacttaacaagagcacttaaaatcattttt 22582869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 17243029 - 17242951
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||||||| ||||||  || ||||||||||||||  ||| ||||||||||||    
T  17243029 caattcaatatattccactttgcatttatgatagtagagaatagaccaatacttaacaagagtactaaaaaccattttt 17242951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 24231043 - 24231121
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||  |||||||||||||| || |||||| |||||||    
T  24231043 caattcaatatattccactttccatttatggtagtggagaatgcatcaatacttaacaagaacagttaaaatcattttt 24231121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 39183702 - 39183624
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||||||||| | | ||||||||| |||||||    
T  39183702 caattcaatatattccactttgcatttatgatagtggagaattcatcaatacttaacgaaagcacttaaaatcattttt 39183624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 25814396 - 25814475
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| |||||| |||||||||||||||| |||| || |||||||||||||  |||||||||| ||||||    
T  25814396 ccaattcaatatatttcactttacatttatgatagtggataatgtaccaatacttaacaagtgcacttaaaactattttt 25814475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 33012386 - 33012465
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||| ||||||||||||||| |||| | | ||||| |||||||| |||||||||||||| |||||||||||||||||    
T  33012386 ccaattctatatattccactttgaatttctaagagtggtgaatgcacaaatacttaacaagagcacttaaaaccattttt 33012465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 858368 - 858446
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||| |||||||| || ||||||||||||||| ||||||||| || |||| |||||||||| ||||||||||||||||    
T  858368 caattaaatatatttcattttgcatttatgataatggagaatgtaccaatatttaacaagataacttaaaaccattttt 858446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 6735431 - 6735377
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaa 57  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6735431 aatttaatatattccactttgcatttatgatagtggagaatgcacaaatacttaa 6735377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 15254798 - 15254876
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| | |||||||| ||||||| ||||||||||||||||| |||||| | ||||||||| |||||||    
T  15254798 caattcaatatattctaatttgcattaatgatagcggagaatgcactaatacataacaaaaacacttaaaatcattttt 15254876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 36446762 - 36446684
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||  |||||||||||||||||||||||||||||| ||||| |||||| | |||||| || |||||||    
T  36446762 caattcaatatattatactttgcatttatgatagtggagaatgcacaaatacataacaaaaacacttataatcattttt 36446684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 39008160 - 39008243
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagt----ggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| |||||| |||||||||||||    |||||||| || |||||||||||||| |||||||||||||||||    
T  39008160 ccaattcaatatatttcactttacatttatgatagttagtggagaatgaaccaatacttaacaagagcacttaaaaccattttt 39008243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 6610871 - 6610948
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||| |||||| |||||||||||||||||||||||| ||||||||| || | ||||||||  |||||||    
T  6610871 aattcaatatatttcactttacatttatgatagtggagaatgcaccaatacttaataaaaacacttaaactcattttt 6610948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 7311254 - 7311177
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| ||||||||||||||||| |||  ||||||| ||||||| | |||| |||||||||||||||||    
T  7311254 aattcaatatattctactttgcatttatgataatggtaaatgcacaaatacttgataagagcacttaaaaccattttt 7311177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 36469168 - 36469091
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||  |||||||||||||||||||||||||||||| ||||| |||||| | |||||| || |||||||    
T  36469168 aattcaatatattatactttgcatttatgatagtggagaatgcaccaatacataacaaaaacacttataatcattttt 36469091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 42211366 - 42211440
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| ||||||||||||||||||||||| ||| |    ||||||||||||| |||||||||||||||||    
T  42211366 caattcaatatatttcactttgcatttatgatagtggaaaatac----atacttaacaagagcacttaaaaccattttt 42211440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 13135787 - 13135831
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcac 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  13135787 aattcaatatattccactttgcatttatgatagtggagaatgcac 13135831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 20189925 - 20190003
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||  | ||||||||||   |||||||||| ||||||    
T  20189925 caattcaatatattccactttacatttatgataatggagaatgcatcagtacttaacaaatgcacttaaaactattttt 20190003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 26330282 - 26330341
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaaga 62  Q
    |||||||||||||||||||||||||||||||| |||  |||| |||||||||| ||||||    
T  26330282 aattcaatatattccactttgcatttatgataatggtaaatgaactaatacttgacaaga 26330341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 35585691 - 35585613
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| |||||||  |||||||||||||| ||||||  ||||||||||||||  | |||||| |||||||    
T  35585691 caattcaatatatttcactttgtctttatgatagtggataatgcatcaatacttaacaagaatatttaaaatcattttt 35585613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 42575600 - 42575555
Alignment:
Q  80 tgtgaaatgaaaaaatggctcagctaatttgggacggaggaagtaa 125  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||    
T  42575600 tgtgaaatgaaaaaatggctcagctaattcgggacggagggagtaa 42575555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4475278 - 4475338
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaag 61  Q
    ||||||||| || ||||||||||||||||||||| ||| |||||||| ||||||| |||||    
T  4475278 ccaattcaacattttccactttgcatttatgataatggtgaatgcaccaatacttgacaag 4475338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 16926167 - 16926088
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||| ||||| |||||||||||  | ||||||||| |||||||||| |   |||| ||||||||||||    
T  16926167 ccaattcaatatattctactttccatttatgataaagaagaatgcaccaatacttaacgaaggcactcaaaaccattttt 16926088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 6173055 - 6172977
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||  ||||||||||||||||| |||  |||||| ||||| || | |||| |||||||||| ||||||    
T  6173055 caattcaatatattatactttgcatttatgataatggtaaatgcattaatatttgataagagcacttaaaactattttt 6172977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 17935264 - 17935334
Alignment:
Q  10 tatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||| ||||||| |||||||||  || |||||||||||||| ||||||||| |||||||| | ||||||    
T  17935264 tatatttcactttgtatttatgatgatgtagaatgcactaatatttaacaagaacacttaaacctattttt 17935334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 25344813 - 25344763
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaata 52  Q
    ||||||||||||||| ||||| ||||||||||| ||| |||||||||||||    
T  25344813 caattcaatatattctactttacatttatgataatggtgaatgcactaata 25344763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 32539717 - 32539775
Alignment:
Q  24 catttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatttttgt 82  Q
    |||||||||||||||||||||||| ||||| ||| || | ||||||||||||| |||||    
T  32539717 catttatgatagtggagaatgcaccaatacataataaaagcacttaaaaccatctttgt 32539775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 36006968 - 36006890
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatttt 79  Q
    |||||||| ||||||| ||||| |||||||||||  | ||||||||| ||||||| ||||   ||||||||||||||||    
T  36006968 ccaattcagtatattctactttacatttatgataaagaagaatgcacaaatacttgacaaagacacttaaaaccatttt 36006890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 9426627 - 9426574
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatactt 55  Q
    |||||||| || ||||||||||||||||||||| ||| ||||| ||||||||||    
T  9426627 caattcaacatcttccactttgcatttatgataatggtgaatgtactaatactt 9426574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39212627 - 39212566
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagt-ggagaatgcactaatacttaacaag 61  Q
    |||||||||||||||| ||||||||||||||||| | || |||||||| ||||||| |||||    
T  39212627 ccaattcaatatattctactttgcatttatgataatgggggaatgcaccaatacttgacaag 39212566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 8369662 - 8369618
Alignment:
Q  80 tgtgaaatgaaaaaatggctcagctaatttgggacggaggaagta 124  Q
    |||||||||||||||||| |||||||||| |||||||||| ||||    
T  8369662 tgtgaaatgaaaaaatggttcagctaattcgggacggagggagta 8369618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 43573038 - 43573098
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaag 61  Q
    |||||||||||| | ||||||||||||||||||  ||| |||||||| ||||||| |||||    
T  43573038 ccaattcaatatctcccactttgcatttatgatcatggtgaatgcaccaatacttgacaag 43573098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 4576480 - 4576414
Alignment:
Q  6 tcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaac 73  Q
    ||||||| ||||| ||||||||||||||| ||| | |||||| ||||||| |||||| ||||||||||    
T  4576480 tcaatatcttccattttgcatttatgataatggtg-atgcaccaatacttgacaagaacacttaaaac 4576414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 5357893 - 5357814
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||| |||||||||| ||||| |||||||||||  | |||||| || ||||||||||||   |||| ||||||||||||    
T  5357893 ccaatacaatatattctactttacatttatgataaagaagaatgaaccaatacttaacaaagacactcaaaaccattttt 5357814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 35988666 - 35988744
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||| |||||||||||||||||     |||||||| ||||||| |||| | |||||||||| ||||||    
T  35988666 ccaattcaatatattcaactttgcatttatgataagaatgaatgcaccaatacttgacaaca-cacttaaaactattttt 35988744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 39060498 - 39060419
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||| ||||||| || |||||||||||||||||  | |||||| || ||||||||||||   |||| ||||||||||||    
T  39060498 ccaatacaatatagtctactttgcatttatgataaagaagaatggaccaatacttaacaaatgcactcaaaaccattttt 39060419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4044553 - 4044499
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatactt 55  Q
    |||||||||||||||| ||||| |||||||||||  | ||||||||| |||||||    
T  4044553 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatactt 4044499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 15898224 - 15898302
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| |||||||||||||||||  | ||||||||  |||| |||| |||  ||||||||  |||||||    
T  15898224 caattcaatatattctactttgcatttatgataaagaagaatgcatcaatagttaataaggacacttaaactcattttt 15898302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 16884005 - 16883935
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaac 73  Q
    |||||||||||||  ||||| ||||||||||| | | |||||||| ||| |||||||||| |||| |||||    
T  16884005 aattcaatatattttactttacatttatgataatagtgaatgcacaaatgcttaacaagaacactcaaaac 16883935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 35666922 - 35666996
Alignment:
Q  6 tcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||| |||||| |||||| ||| |||  ||||||| ||||||||| || | |||||||||| ||||||    
T  35666922 tcaatatattctactttgtatttataataatggtaaatgcaccaatacttaagaaaagcacttaaaactattttt 35666996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 39061028 - 39060982
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcacta 49  Q
    |||||||||||||| |||||||||||||||||  | |||||||||||    
T  39061028 aattcaatatattctactttgcatttatgataaagaagaatgcacta 39060982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 5147570 - 5147521
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaata 52  Q
    |||||||||||||| |||||||||||||||||  | ||||||||| ||||    
T  5147570 aattcaatatattctactttgcatttatgataaagaagaatgcaccaata 5147521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 13016439 - 13016406
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgata 34  Q
    |||||||||||||||| |||||||||||||||||    
T  13016439 ccaattcaatatattctactttgcatttatgata 13016406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 8692770 - 8692734
Alignment:
Q  89 aaaaaatggctcagctaatttgggacggaggaagtaa 125  Q
    |||||||||||||||||||| |||||||||| |||||    
T  8692770 aaaaaatggctcagctaattcgggacggagggagtaa 8692734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 13087816 - 13087784
Alignment:
Q  2 caattcaatatattccactttgcatttatgata 34  Q
    ||||||||||||||| |||||||||||||||||    
T  13087816 caattcaatatattctactttgcatttatgata 13087784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 42818938 - 42819014
Alignment:
Q  4 attcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||| ||||| |||||||||||  | ||||||||| |||  |||| |||  |||| ||||||||||||    
T  42818938 attcaatatattctactttacatttatgataaagaagaatgcaccaatgattaataagggcactcaaaaccattttt 42819014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 9e-29; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 7425953 - 7425873
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatactt-aacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||    
T  7425953 ccaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaaacaagaacacttaaaaccattttt 7425873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 11616593 - 11616673
Alignment:
Q  1 ccaattcaat-atattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  11616593 ccaattcaattatattccactttgcatatatgatagtggagaatgcaccaatacttaacaagagcacttaaaaccattttt 11616673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 37490692 - 37490614
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || | ||||||||| |||||||    
T  37490692 caattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaaaaaaaacacttaaaatcattttt 37490614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 2846751 - 2846672
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||| |||||||||||||||||||  || |||||||||||||| |||||||||| ||||||    
T  2846751 ccaattcaatatattccactttgaatttatgatagtggagaatagaccaatacttaacaagagcacttaaaactattttt 2846672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 29257579 - 29257658
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||||||||||| |||  || |||| ||||||||| |||||||||||||||||    
T  29257579 ccaattcaatatattccactttgcatttatgatagtggaaaatagaccaataattaacaagagcacttaaaaccattttt 29257658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 33584595 - 33584674
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||| ||||||||||||||| |||||||| ||| |||||||||||| | |||||||||||||||||    
T  33584595 ccaattcaatatattccattttgcatttatgatactggagaatacaccaatacttaacaatagcacttaaaaccattttt 33584674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 38181949 - 38181870
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||| | |||||||||||||||||||| ||||||| |||||||| ||||| |||||||||||||||||    
T  38181949 ccaattcaatatattctattttgcatttatgatagtggaaaatgcaccaatacttaccaagaacacttaaaaccattttt 38181870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 29434654 - 29434576
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||| | |||||||||| ||||||    
T  29434654 caattcaatatattccactttgcatttatgaaagtggagaatccaccaatacttaacaaaagcacttaaaactattttt 29434576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 46095494 - 46095416
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| |||||||||||||||||||| |||||||||| |||| ||||||||| |||| ||||||||||||    
T  46095494 caattcaatatatttcactttgcatttatgatagtagagaatgcacaaatatttaacaagagcactcaaaaccattttt 46095416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 5724780 - 5724704
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  5724780 aattcaatatatttcactttacatttatgatagtggagaatgcactaatacttaacaag-gcacttaaaactattttt 5724704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 21387554 - 21387495
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaag 61  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  21387554 caattcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaag 21387495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 36117694 - 36117773
Alignment:
Q  2 caattcaatatattccactttgcatttatga-tagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||  |||||||||| ||||||    
T  36117694 caattcaatatattccactttacatttatgaatagtggagaatgcacaaatacttaacaagtgcacttaaaactattttt 36117773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 30463049 - 30463127
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||| |||||||||||||  |||||||||| ||||||    
T  30463049 caattcaatatattccattttacatttatgattgtggagaatgcaccaatacttaacaagtgcacttaaaactattttt 30463127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 2842125 - 2842048
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||| | ||||||| |||||||||    
T  2842125 aattcaatatatttcactttgcatttatgatagtggagaatgcatcaatacttgacaataacacttaacaccattttt 2842048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 47454041 - 47454114
Alignment:
Q  6 tcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatttt 79  Q
    |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| |||||    
T  47454041 tcaatatatttcactttacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaactatttt 47454114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 23058858 - 23058929
Alignment:
Q  8 aatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||| ||||||    
T  23058858 aatatatttcactttgcatttatgatagtggagaatgcaccaatac-taacaagaacacttaaaactattttt 23058929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 17266059 - 17266138
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||||||| ||||||||| || | ||||| |||||||||||    
T  17266059 ccaattcgatatatttcactttgcatttatgatagtgaagaatgcaccaatacttaataaaaacactttaaaccattttt 17266138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 44604547 - 44604474
Alignment:
Q  6 tcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||| ||||||||| |||||||    
T  44604547 tcaatatattccactttgc-tttatgatagtggagaataaaccaatacttaacaagaacacttaaaatcattttt 44604474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 49100577 - 49100507
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaa 71  Q
    |||||||||||||||||||||| ||||||||||||||||||||  || |||||||||||||  ||||||||    
T  49100577 ccaattcaatatattccactttacatttatgatagtggagaataaaccaatacttaacaagtgcacttaaa 49100507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 34001933 - 34001856
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatttt 79  Q
    ||||||||||||||||||||||||||||||||| |||| |   ||  |||||||||||||| ||||||||||||||||    
T  34001933 caattcaatatattccactttgcatttatgataatggataccacatcaatacttaacaagagcacttaaaaccatttt 34001856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 18235230 - 18235282
Alignment:
Q  9 atatattccactttgcatttatgatagtggagaatgcactaatacttaacaag 61  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  18235230 atatattccactttacatttatgatagtggagaatgcaccaatacttaacaag 18235282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 31581517 - 31581459
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaa 60  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||||    
T  31581517 caattcaatatattccattttacatttatgatattggagaatgcaccaatacttaacaa 31581459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 33774117 - 33774040
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||| ||||||||||||||||| |||||||||||||||| ||  |||||||||||||| |||| ||||| ||||||    
T  33774117 caattcagtatattccactttgcatctatgatagtggagaatacatcaatacttaacaaga-cactcaaaactattttt 33774040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 27234536 - 27234613
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatttt 79  Q
    ||||| |||||||| |  |||||||||||||||||||||||||||  |||||||||||| | |||||||||| |||||    
T  27234536 caatttaatatatttcgttttgcatttatgatagtggagaatgcatcaatacttaacaaaaacacttaaaacaatttt 27234613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 46288505 - 46288453
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatact 54  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| |||||||    
T  46288505 caattcaatatattccactttgcattaatgatagtcgagaatgcattaatact 46288453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 32776015 - 32776094
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||| ||||| |||||||||||  | ||||||||| ||||||||||||   |||| ||||||||||||    
T  32776015 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaacaaaggcactcaaaaccattttt 32776094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 34963885 - 34963804
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtg---gagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||| |||||||| |||||| ||||||||||||||   |||||||||| |||| |||||||| ||||||||||| ||||||    
T  34963885 caattaaatatatttcactttacatttatgatagtgaaagagaatgcaccaatatttaacaagttcacttaaaactattttt 34963804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 23703949 - 23704027
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| || ||| |||||||||||||||||||||||  |||| ||||||||  | |||||||| ||||||    
T  23703949 caattcaatatatttcattttacatttatgatagtggagaatgcagcaataattaacaagtgcgcttaaaactattttt 23704027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 7425838 - 7425793
Alignment:
Q  80 tgtgaaatgaaaaaatggctcagctaatttgggacggaggaagtaa 125  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||    
T  7425838 tgtgaaatgaaaaaatggctcagctaattcgggacggagggagtaa 7425793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 23186216 - 23186167
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaata 52  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||    
T  23186216 aattcaatatattctactttgtatttatgatagtggagaatgcaccaata 23186167  T

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Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 1643412 - 1643357
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaa 57  Q
    ||||| ||||||||||||||||||||||||||  || ||||||||| |||||||||    
T  1643412 caatttaatatattccactttgcatttatgattatgaagaatgcaccaatacttaa 1643357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 28923291 - 28923232
Alignment:
Q  14 ttccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaac 73  Q
    ||||||||||||||||| ||| ||| |||||||| ||||||| |||| ||||||||||||    
T  28923291 ttccactttgcatttataataatggtgaatgcaccaatacttgacaaaatcacttaaaac 28923232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 40590896 - 40590841
Alignment:
Q  5 ttcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaa 60  Q
    |||||||||||| |||||| ||||||||||| ||| ||||||| ||||||||||||    
T  40590896 ttcaatatattctactttgtatttatgatagcggaaaatgcaccaatacttaacaa 40590841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 48981688 - 48981767
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||| ||||||||||||||| |||||||||||||||| |||  || ||||| |||||||  || ||||||| ||||||    
T  48981688 ccaatttaatatattccactttacatttatgatagtggataatataccaatacataacaagtgcatttaaaactattttt 48981767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 19687992 - 19688070
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||  ||||||||||||||||| |||  ||| ||  ||||||| |||||| ||||||||| |||||||    
T  19687992 caattcaatatattatactttgcatttatgataatggtaaattcatcaatacttgacaagaacacttaaaaacattttt 19688070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 34064248 - 34064325
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| ||||| |||||||||||    ||||||||| |||||||||||||| |||| ||||| ||||||    
T  34064248 caattcaatatattctactttacatttatgataagaaagaatgcaccaatacttaacaaga-cactcaaaactattttt 34064325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 7456657 - 7456600
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaa 60  Q
    |||| |||||||||||||||  ||||||||||||||||||| ||  ||||||||||||    
T  7456657 aatttaatatattccactttatatttatgatagtggagaatacatcaatacttaacaa 7456600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 37496471 - 37496410
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagat 63  Q
    ||||||||||||||| ||||| |||||||||||    ||||||||| |||||||||||||||    
T  37496471 caattcaatatattctactttacatttatgataagaaagaatgcacaaatacttaacaagat 37496410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 6591614 - 6591574
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaat 43  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  6591614 aattcaatatattctactttgcatttatgataatggagaat 6591574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 31549692 - 31549636
Alignment:
Q  6 tcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaaga 62  Q
    ||||||||||| |||||||||| |||||| |||  ||||||||||||||| ||||||    
T  31549692 tcaatatattctactttgcattaatgataatggtaaatgcactaatacttgacaaga 31549636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 29997104 - 29997025
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||| ||||||||||  |||||||||||||||||  | ||||||||| |||| ||||||||  || | ||||||||||||    
T  29997104 ccaactcaatatattatactttgcatttatgataaagaagaatgcaccaataattaacaaggacattcaaaaccattttt 29997025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37264345 - 37264424
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||| |||||||||||||||||  |   ||||||  ||||||| |||||  |||| ||||||||||||    
T  37264345 ccaattcaatatattctactttgcatttatgataaagagcaatgcatcaatacttgacaagggcactcaaaaccattttt 37264424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 2849288 - 2849346
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaa 60  Q
    ||||||||||||||| ||||| |||||||||||  | ||||||||| ||||||| ||||    
T  2849288 caattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaa 2849346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 5083518 - 5083468
Alignment:
Q  30 tgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||| ||||| |||||| |||||||||||||| |||||||||| ||||||    
T  5083518 tgataatggagtatgcaccaatacttaacaagagcacttaaaactattttt 5083468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 5083516 - 5083550
Alignment:
Q  6 tcaatatattccactttgcatttatgatagtggag 40  Q
    |||||||||| ||||||||||||||||||||||||    
T  5083516 tcaatatatttcactttgcatttatgatagtggag 5083550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 40038166 - 40038113
Alignment:
Q  18 actttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    |||||| ||||||||||||| ||||| ||| ||||||||||||||||| ||||||    
T  40038166 actttgtatttatgatagtgaagaatacac-aatacttaacaagatcatttaaaa 40038113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 45218233 - 45218179
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatactt 55  Q
    |||||||||||||||| ||||| |||||||||||  | ||||||||| |||||||    
T  45218233 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatactt 45218179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 24288456 - 24288509
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatactt 55  Q
    ||||||||||||||| ||||| |||||||||||  | ||||||||| |||||||    
T  24288456 caattcaatatattctactttacatttatgataaagaagaatgcacaaatactt 24288509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 120
Target Start/End: Complemental strand, 5083433 - 5083393
Alignment:
Q  80 tgtgaaatgaaaaaatggctcagctaatttgggacggagga 120  Q
    ||||||| |||||||||| |||||||||| |||||||||||    
T  5083433 tgtgaaaagaaaaaatggttcagctaattcgggacggagga 5083393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 10355809 - 10355777
Alignment:
Q  2 caattcaatatattccactttgcatttatgata 34  Q
    ||||||||||||||| |||||||||||||||||    
T  10355809 caattcaatatattctactttgcatttatgata 10355777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 26938553 - 26938509
Alignment:
Q  80 tgtgaaatgaaaaaatggctcagctaatttgggacggaggaagta 124  Q
    |||||||||||||||||| ||| |||||| |||||||||| ||||    
T  26938553 tgtgaaatgaaaaaatggttcaactaattcgggacggagggagta 26938509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 37157203 - 37157259
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtgg-agaatgcactaatacttaa 57  Q
    ||||| ||||||||| ||||| ||||||||||||||| | ||||||| |||||||||    
T  37157203 caatttaatatattctactttacatttatgatagtggaaaaatgcaccaatacttaa 37157259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 40803701 - 40803641
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaag 61  Q
    ||||||||||||| | || ||| |||||||||||||||||||  ||| |||| ||||||||    
T  40803701 ccaattcaatataattcattttacatttatgatagtggagaaaacaccaatatttaacaag 40803641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 3e-28; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 5392081 - 5392160
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| | |||||||||||||||||    
T  5392081 ccaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttgacaaaagcacttaaaaccattttt 5392160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 33190984 - 33190905
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||    
T  33190984 ccaattcaatatattccactatgcatttatgatagtggagaatgcattaatacttaacaagaacacttaaaatcattttt 33190905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 38252513 - 38252434
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||| ||||||    
T  38252513 ccaattcaatatattccactttacatttatgacagtggagaatgcactaatacttaacaagtgcacttaaaactattttt 38252434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 44790497 - 44790418
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||||||    
T  44790497 ccaattcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaactattttt 44790418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 28802800 - 28802878
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||  |  |||||||||||||| |||||||||||||||||    
T  28802800 caattcaatatattccactttgcatttatgatagtggagaatagatcaatacttaacaagagcacttaaaaccattttt 28802878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 5962548 - 5962476
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaac 73  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| | ||||||||||    
T  5962548 ccaattcaatatattccactttgcatttataatagtggagaatgcaccaatacttaacaaaagcacttaaaac 5962476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 29730963 - 29730892
Alignment:
Q  9 atatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  29730963 atatattctactttgcatttatgatagtggagaatgcaccaatacttaacaagaacacttaaaaccactttt 29730892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 32241499 - 32241420
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||  |||||||||||||| ||||||||| |||||||    
T  32241499 ccaattcattatattccactttgcatttatgatagtgaagaatgcatcaatacttaacaagaacacttaaaatcattttt 32241420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 42558654 - 42558579
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattt 78  Q
    |||||||||||||||||||||||||||||||||||||||||  || |||||||||||||| || ||||||||||||    
T  42558654 aattcaatatattccactttgcatttatgatagtggagaataaaccaatacttaacaagaacaattaaaaccattt 42558579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 45425519 - 45425594
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattt 78  Q
    |||| |||||||||||||||||||||||||||||||| ||||||  |||||||||||||| |||||||||||||||    
T  45425519 aatttaatatattccactttgcatttatgatagtggaaaatgcatcaatacttaacaagagcacttaaaaccattt 45425594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21587309 - 21587382
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaacc 74  Q
    |||||||||||||||||||||||||||| | | |||||||||||||| |||||||||||||| |||||||||||    
T  21587309 ccaattcaatatattccactttgcatttctaacagtggagaatgcaccaatacttaacaagagcacttaaaacc 21587382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2349382 - 2349461
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||   |||||||||| ||||||    
T  2349382 ccaattcaatatattccaatttacatttatgatagtggagaatgcacaaatacttaacaaatgcacttaaaactattttt 2349461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 42412458 - 42412379
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||  | |||||| |||||||||| ||||||    
T  42412458 ccaattcaatatattccactttgcatttatgataatggagaatgcaccaatatatgacaagagcacttaaaactattttt 42412379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 12958051 - 12957977
Alignment:
Q  6 tcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||  ||| |||| |||||||||||||||||    
T  12958051 tcaatatattccactttgtatttatgatagttgagaatgcactaatagataataagagcacttaaaaccattttt 12957977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 22325029 - 22324959
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||  |||||||||    
T  22325029 caattcaatatattccactttacatttatgatagtggaaaatgcactaatatttaacaagtacacttaaaa 22324959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 39171576 - 39171654
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||||||| || ||||||  |||||||||||| |  ||||||||||||||||    
T  39171576 caattcaatatattccactttgcatttatgatagtagataatgcatcaatacttaacaaaagtacttaaaaccattttt 39171654  T

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Target: chr8; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 9014745 - 9014814
Alignment:
Q  11 atattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||| | ||||||||| |||||||    
T  9014745 atattccactttgcatttatgatagtggagaatgcatcaatacttaacaaaagcacttaaaatcattttt 9014814  T

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Target: chr8; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 13085015 - 13084942
Alignment:
Q  9 atatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatttttgt 82  Q
    ||||||||||||||||||||||||| || |||||||||| |||| ||||||||| |||||||||| ||||||||    
T  13085015 atatattccactttgcatttatgattgtagagaatgcaccaataattaacaagaacacttaaaactatttttgt 13084942  T

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Target: chr8; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 139055 - 139133
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||| |||||||||||||||||||||||||| ||| ||||||| ||||||||||||||  | |||||| |||||||    
T  139055 caattcattatattccactttgcatttatgatagcggaaaatgcaccaatacttaacaagagaatttaaaatcattttt 139133  T

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Target: chr8; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 31410681 - 31410611
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaac 73  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||| | ||||||||||    
T  31410681 aattcaatatattccactttgcatttatgatagtgtataatgcaccaatatttaacaaaaacacttaaaac 31410611  T

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Target: chr8; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 32967351 - 32967273
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||  |||||||||||||||||||| || ||||||||| |||  |||||||||| ||||||    
T  32967351 caattcaatatattccactttaaatttatgatagtggagaatggaccaatacttaagaagtgcacttaaaactattttt 32967273  T

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Target: chr8; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 10728997 - 10728919
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||||||    ||||||||| |||||||||||||| |||| ||||| ||||||    
T  10728997 ccaattcaatatattccactttgcatttatgataagaaagaatgcacaaatacttaacaaga-cactcaaaactattttt 10728919  T

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Target: chr8; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 15559203 - 15559124
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatttttgt 82  Q
    |||||||||||||| ||||||||||||||||| |||  ||| ||| ||||||| |||||| ||||||||| |||||||||    
T  15559203 aattcaatatattctactttgcatttatgataatggtaaatacaccaatacttgacaagaacacttaaaatcatttttgt 15559124  T

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Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 34133159 - 34133230
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    ||||||||||||||| || ||| |||||||||||||||||||||| | |||||||||||||  |||||||||    
T  34133159 ccaattcaatatatttcattttacatttatgatagtggagaatgcgccaatacttaacaagtgcacttaaaa 34133230  T

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Target: chr8; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 44615439 - 44615368
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaac 73  Q
    ||||||||||||||| ||||||||||||| |||||||||||| ||| |||||||||||| | ||||| ||||    
T  44615439 caattcaatatattctactttgcatttataatagtggagaattcaccaatacttaacaaaaacacttcaaac 44615368  T

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Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 12653720 - 12653798
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||| ||||||| |||||||| ||||||| |||| |||||||   |||||||||| ||||||    
T  12653720 caattcaatatattccactttacatttataatagtggataatgcaccaatatttaacaaacgcacttaaaactattttt 12653798  T

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Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 31132771 - 31132841
Alignment:
Q  10 tatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||| ||||||||||||||| ||||||||  || |||||||||||||| ||||||||| |||||||    
T  31132771 tatattccattttgcatttatgatactggagaatataccaatacttaacaagagcacttaaaatcattttt 31132841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 138772 - 138695
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||||||||  || ||| ||| ||||| |||||| | ||||||||| |||||||    
T  138772 aattcaatatattccactttgcatttatgatagaagaaaatccaccaatacataacaaaaacacttaaaatcattttt 138695  T

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Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 33190870 - 33190826
Alignment:
Q  80 tgtgaaatgaaaaaatggctcagctaatttgggacggaggaagta 124  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  33190870 tgtgaaaagaaaaaatggctcagctaatttgggacggaggaagta 33190826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2195500 - 2195578
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||| |||||||||||||||||    ||||||||| |||||||||||||| |||| ||||| ||||||    
T  2195500 ccaattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaacaaga-cactcaaaactattttt 2195578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 7258442 - 7258363
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||| | ||||||||||||||| ||   ||||||| ||||||| |||||| | |||||||||||||||    
T  7258442 ccaattcaatatattctagtttgcatttatgataatgataaatgcaccaatacttgacaagagcgcttaaaaccattttt 7258363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 27973761 - 27973682
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||| ||||| ||||||||||||||||| |||  |||| |  ||||||| |||||| |||||||||||||||||    
T  27973761 ccaattcaatgtattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccattttt 27973682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 28031030 - 28030951
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||| ||||| ||||||||||||||||| |||  |||| |  ||||||| |||||| |||||||||||||||||    
T  28031030 ccaattcaatgtattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccattttt 28030951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 3384567 - 3384645
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| |||||||||||||||||||| |||||  || ||||| ||||||||  | |||| |||||||||    
T  3384567 caattcaatatattcaactttgcatttatgatagtgaagaatataccaatacataacaagagtatttaataccattttt 3384645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 45197644 - 45197722
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| || ||| ||||||||| |||| ||||||||  |||||||||||| | ||||||||| |||||||    
T  45197644 caattcaatatatttcattttacatttatgacagtgaagaatgcatcaatacttaacaaaaacacttaaaatcattttt 45197722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 7042792 - 7042864
Alignment:
Q  9 atatattccactttgcatttatgatagtggagaatgcactaatactt-aacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| ||||||||||| | |||||||||| ||||||| ||||||| ||||||||  |||||||    
T  7042792 atatattccactttacatttatgataatagagaatgcaccaatacttaaacaagagcacttaaattcattttt 7042864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 29615830 - 29615890
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaag 61  Q
    |||||||||||||||||||||| ||||||||| |||||| | | ||| |||||||||||||    
T  29615830 ccaattcaatatattccactttacatttatgacagtggaaagtacaccaatacttaacaag 29615890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 1230436 - 1230383
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatactta 56  Q
    ||||||||||||||| ||||||||||||||||| |||| ||||||| ||||||||    
T  1230436 caattcaatatattctactttgcatttatgataatgga-aatgcaccaatactta 1230383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 14748780 - 14748730
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaata 52  Q
    ||||||||||||||| |||||||||||||||||  | ||||||||||||||    
T  14748780 caattcaatatattctactttgcatttatgataaagaagaatgcactaata 14748730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 27868399 - 27868321
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| ||||||||||||||||| ||   |||| |  ||||||| |||||| ||| |||||||||||||    
T  27868399 caattcaatatattctactttgcatttatgataatgataaatggatcaatacttgacaagaacacgtaaaaccattttt 27868321  T

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Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 886652 - 886717
Alignment:
Q  12 tattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatt 77  Q
    |||| |||| ||||||||| | |||||||||||||| |||||||||||||| |  |||||||||||    
T  886652 tatttcactctgcatttataacagtggagaatgcacaaatacttaacaagaacgtttaaaaccatt 886717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 4274373 - 4274332
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaat 43  Q
    |||||||||||||| ||||||||||||||||||| |||||||    
T  4274373 caattcaatatatttcactttgcatttatgataggggagaat 4274332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 22490424 - 22490465
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaat 43  Q
    |||||||||||||||||||||| ||||||||||||| |||||    
T  22490424 caattcaatatattccactttgtatttatgatagtgaagaat 22490465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 32472130 - 32472187
Alignment:
Q  5 ttcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaaga 62  Q
    |||||||||||| ||||| ||||||||||| ||||||||  |||||||||| ||||||    
T  32472130 ttcaatatattctacttttcatttatgataatggagaatatactaatacttgacaaga 32472187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 33746292 - 33746223
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    |||||||||||||||  |||  |||||| |||||||||| ||||||||||||||| |||  |||||||||    
T  33746292 aattcaatatattcctttttatatttatcatagtggagattgcactaatacttaataagtgcacttaaaa 33746223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 37219722 - 37219685
Alignment:
Q  80 tgtgaaatgaaaaaatggctcagctaatttgggacgga 117  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  37219722 tgtgaaatgaaaaaatgactcagctaatttgggacgga 37219685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8618160 - 8618239
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||  | ||| |||||||||||  | | ||||||| |||||||||||| | ||||||||||| |||||    
T  8618160 ccaattcaatatattatattttacatttatgataaagaataatgcaccaatacttaacaaaaacacttaaaacctttttt 8618239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 14689992 - 14690071
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||| |||||||||||||||||    ||||||||| |||| || | |||  |||| ||||||||||||    
T  14689992 ccaattcaatatattctactttgcatttatgataaaaaagaatgcaccaatagttgataaggacactcaaaaccattttt 14690071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 29567243 - 29567298
Alignment:
Q  7 caatatattccactttgcatttatgatagtggagaatgcactaatacttaacaaga 62  Q
    |||||||||  |||||| |||||||||| ||| |||||||||||||||||| ||||    
T  29567243 caatatattttactttgtatttatgataatggtgaatgcactaatacttaataaga 29567298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 325190 - 325132
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaa 60  Q
    |||||||||||||||||||||  ||||||||||  || |||||||| ||||||| ||||    
T  325190 caattcaatatattccactttatatttatgataacggtgaatgcaccaatacttgacaa 325132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 5878300 - 5878223
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| ||||| |||||||||||  | |||||| |||||||||| ||||   || ||||||||||||||    
T  5878300 caattcaatatattctactttacatttatgata-agtagaatgaactaatacttgacaaagacatttaaaaccattttt 5878223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 2119750 - 2119819
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    |||||| ||||||||||||| ||||||||||| || |||||| || ||||  ||||| || |||||||||    
T  2119750 aattcagtatattccactttacatttatgataatgaagaatgtaccaatatataacaggaacacttaaaa 2119819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 2797072 - 2797105
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgata 34  Q
    |||||||||||||||| |||||||||||||||||    
T  2797072 ccaattcaatatattctactttgcatttatgata 2797105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 17005977 - 17006010
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgata 34  Q
    |||||||||||||||| |||||||||||||||||    
T  17005977 ccaattcaatatattctactttgcatttatgata 17006010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 17571271 - 17571238
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgata 34  Q
    |||||||||||||||| |||||||||||||||||    
T  17571271 ccaattcaatatattctactttgcatttatgata 17571238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 39416344 - 39416396
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatactt 55  Q
    |||||||| |||||||| ||||||||||||||| | |||||||||| |||||||    
T  39416344 caattcaa-atattccaatttgcatttatgatattagagaatgcacaaatactt 39416396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 40077823 - 40077766
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaa 60  Q
    |||||||||||||| ||||| |||||||||||  | ||||||||| ||||||| ||||    
T  40077823 aattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaa 40077766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 14954003 - 14953955
Alignment:
Q  6 tcaatatattccactttgcatttatgatagtggagaatgcactaatact 54  Q
    ||||||||||| ||||||||||||||||| ||  |||| ||||||||||    
T  14954003 tcaatatattctactttgcatttatgataatgatgaatacactaatact 14953955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 26677113 - 26677177
Alignment:
Q  9 atatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaac 73  Q
    |||||||| ||||||||||||||||| ||| |||||||| |||| || ||||   ||||||||||    
T  26677113 atatattctactttgcatttatgataatggtgaatgcaccaatattttacaatgacacttaaaac 26677177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 33925062 - 33925018
Alignment:
Q  80 tgtgaaatgaaaaaatggctcagctaatttgggacggaggaagta 124  Q
    ||||||| ||||||||||||||||||||| |||| ||||| ||||    
T  33925062 tgtgaaaagaaaaaatggctcagctaattcgggatggagggagta 33925018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 30
Target Start/End: Complemental strand, 33925158 - 33925130
Alignment:
Q  2 caattcaatatattccactttgcatttat 30  Q
    |||||||||||||||||||||||||||||    
T  33925158 caattcaatatattccactttgcatttat 33925130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 3e-28; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 31265811 - 31265890
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  31265811 ccaattcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaactattttt 31265890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3604675 - 3604596
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||||  ||| |||||||||||| ||||||||||||||  ||||||||||||||||    
T  3604675 ccaattcaatatattccactttgcatttacaataatggagaatgcaccaatacttaacaagagaacttaaaaccattttt 3604596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 15081455 - 15081534
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||  |||||||||| ||||||    
T  15081455 ccaattcaatatattccactttacgtttatgatagtggagaatgcacaaatacttaacaagtgcacttaaaactattttt 15081534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 7301154 - 7301076
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||   |||||||||| ||||||    
T  7301154 caattcaatatattccactttacatttatgataatggagaatgcacaaatacttaacaaacacacttaaaactattttt 7301076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 14312722 - 14312644
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||| ||| |||||| ||||||||||| |||||||||||| |||||||||||| | |||||||||||||||||    
T  14312722 caattcaatacatttcactttacatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccattttt 14312644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 30064024 - 30063952
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaac 73  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||| || | ||||||||||    
T  30064024 ccaattcaatatattccactttgcatttataatagtggagaatacacaaatacttaataaaagcacttaaaac 30063952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 4238454 - 4238525
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaac 73  Q
    |||||||||| ||| |||||| |||||||||||||| ||||||||| |||||||||||||| ||||||||||    
T  4238454 caattcaatagatttcactttacatttatgatagtgaagaatgcaccaatacttaacaagagcacttaaaac 4238525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 34915886 - 34915831
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaac 58  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  34915886 aattcaatatattccactttgcatttatgataatggagaatgcaccaatacttaac 34915831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 14306315 - 14306237
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||| |||| ||| |||||| ||||||||||| |||||||||||| |||||||||||| | |||||||||||||||||    
T  14306315 caatttaatacatttcactttacatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccattttt 14306237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 117112 - 117190
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||| |||||||||  |||||||||||| |||  |||||||||   |||||||||||||||    
T  117112 caattcaatatattccactttgtatttatgatcatggagaatgcaccaatttttaacaagagtccttaaaaccattttt 117190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 15371938 - 15371860
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||| |||||||||||||||||  | |||||||||||||| || | |||| |||| ||||||||||||    
T  15371938 ccaattcaatatattctactttgcatttatgataaagaagaatgcactaatagttgataaga-cactcaaaaccattttt 15371860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 9755221 - 9755143
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| ||| | ||||||||||||||||||||| || ||||||||||| |   ||||||||| ||||||    
T  9755221 caattcaatatattctactctacatttatgatagtggagaatgtaccaatacttaacacgtgaacttaaaactattttt 9755143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 33921544 - 33921465
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||| ||||| |||||||||||  | |||||| || ||||||||||||   |||| ||||||||||||    
T  33921544 ccaattcaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaacacactcaaaaccattttt 33921465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 33109406 - 33109484
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| || ||| |||| | ||||||||||||||||| |||| ||||||||  || ||||||| ||||||    
T  33109406 caattcaatatatttcattttacattaacgatagtggagaatgcacaaatatttaacaagtgcatttaaaactattttt 33109484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 33018019 - 33017960
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaa 60  Q
    |||||||||||||||| ||||| |||||||||||  | ||||||||| ||||||| ||||    
T  33018019 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaa 33017960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 26356303 - 26356380
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||| |||||||||||||||||  ||   ||| ||||||||||| ||||||  | ||| ||||||||||    
T  26356303 aattcaatatatttcactttgcatttatgatgatgacaaatacactaatacttgacaagagtatttataaccattttt 26356380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 29444042 - 29444083
Alignment:
Q  5 ttcaatatattccactttgcatttatgatagtggagaatgca 46  Q
    |||||||||||| |||||| |||||||||| |||||||||||    
T  29444042 ttcaatatattcaactttgtatttatgataatggagaatgca 29444083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 15321299 - 15321267
Alignment:
Q  2 caattcaatatattccactttgcatttatgata 34  Q
    ||||||||||||||| |||||||||||||||||    
T  15321299 caattcaatatattctactttgcatttatgata 15321267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 3e-28; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 18849834 - 18849759
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccat 76  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  18849834 ccaattcaatatatttcactttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaaccat 18849759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 4360482 - 4360404
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| | |||||||||||||||||    
T  4360482 caattcaatatattccactttgcatttatgctagtggagaatgcaccaatacttaacaaaagcacttaaaaccattttt 4360404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 54729558 - 54729480
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||| ||||||    
T  54729558 caattcaatatattccactttgcatttatgatagtggagaatacactaatacttaacaaaaacacttaaaactattttt 54729480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 42544242 - 42544318
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattt 78  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||| |||||    
T  42544242 caattcaatatattccactttgcatttatgatagtggagaatagactaatacttaacaagagcacttaaaatcattt 42544318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 17237076 - 17237154
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||| |||||||||||| ||||||    
T  17237076 caattcaatatattccactttgcatttatgatagtaaagaatccactaatacttaacaaaatcacttaaaactattttt 17237154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 27977180 - 27977258
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| | ||||||||| |||||||    
T  27977180 caattcaatatattccactttgcatttataatagtggagaatgcaccaatacttaacaaaaacacttaaaatcattttt 27977258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 49306621 - 49306698
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||||| |||||||  || |||||||||||||| |||||||||||||||||    
T  49306621 aattcaatatattccactttgcatttatgataggggagaatagaccaatacttaacaagagcacttaaaaccattttt 49306698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9093837 - 9093758
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||||||    
T  9093837 ccaatttaatatattccactttacatttatgatagtggagaatgcacaaatacttaacaagtgcacttaaaactattttt 9093758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 33047524 - 33047603
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||| |||||||||||||||||||  || |||||||||||| | |||||||||||||||||    
T  33047524 ccaattcaatatattccactttgtatttatgatagtggagaatctaccaatacttaacaaaagcacttaaaaccattttt 33047603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 39979812 - 39979891
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||  |||||||||| ||||||    
T  39979812 ccaattcaatatattccactttacatttatgatagtggagaatgcaccgatacttaacaagtgcacttaaaactattttt 39979891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 41710219 - 41710140
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||||||||||| |||  || |||| ||||||||| |||||||||||||||||    
T  41710219 ccaattcaatatattccactttgcatttatgatagtggaaaatagaccaataattaacaagagcacttaaaaccattttt 41710140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 41436514 - 41436592
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||| |||||| |||||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||    
T  41436514 caattcaaaatattctactttgcatttatgatagtggagaatgcaccaatacataacaaaagcacttaaaaccattttt 41436592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 22872462 - 22872382
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaa--gatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||  || |||||||||||||||||    
T  22872462 caattcaatatattccactttgcatttatgataatggagaatgcaccaatacttgacaaacgagcacttaaaaccattttt 22872382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 50328145 - 50328068
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatttt 79  Q
    |||||||||||||| |||||||||||||||||||||| |||||||| ||||||| |||||  ||||||||||||||||    
T  50328145 caattcaatatatttcactttgcatttatgatagtggtgaatgcaccaatacttgacaagtacacttaaaaccatttt 50328068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 39976464 - 39976392
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaacc 74  Q
    ||||||||||||||||||||||||||| | | |||||||||||||| |||||||||||||| |||||||||||    
T  39976464 caattcaatatattccactttgcatttctaacagtggagaatgcaccaatacttaacaagagcacttaaaacc 39976392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 283552 - 283473
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||| ||||||||||||||| |||| | |||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  283552 ccaattctatatattccactttgaatttctaatagtggagaatgcacaaatacttaacaagagcacttaaaacaattttt 283473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 28974342 - 28974417
Alignment:
Q  5 ttcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||| |||||||||||||||| |||||||||||| |||||||||||| | |||||||||||| ||||    
T  28974342 ttcaatatattcccctttgcatttatgataatggagaatgcaccaatacttaacaacaacacttaaaaccactttt 28974417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 42024276 - 42024197
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||||| ||||||||||||  || ||||||||||||||  | ||||||||||||||    
T  42024276 ccaattcaatatattccactttgcatttataatagtggagaatagaccaatacttaacaagagtagttaaaaccattttt 42024197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 49812261 - 49812340
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||| |||||||||||||  |||||||||| ||||||    
T  49812261 ccaatacaatatattccactttacatttatgatagtggataatgcaccaatacttaacaagtgcacttaaaactattttt 49812340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 41203770 - 41203848
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||||  |||||||||||||| |||| ||||||||||||    
T  41203770 caattcaatatattccactttgtatttatggtagtgaagaatgcatcaatacttaacaagagcactaaaaaccattttt 41203848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 49448874 - 49448952
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||  ||||||||||||||||| | |||||||||| ||||||| |||||| |||||||||||||||||    
T  49448874 caattcaatatattatactttgcatttatgataatagagaatgcacaaatacttgacaagagcacttaaaaccattttt 49448952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 3686044 - 3686115
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaac 73  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||| |  |||||||||    
T  3686044 caattcaatatattcaactttgcatttataatagtggagaatgcaccaatacttaacaaaagtacttaaaac 3686115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 8065569 - 8065644
Alignment:
Q  5 ttcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||| ||||||| ||||||||||||| |||||||||| |||||||||||||  |||||||||| ||||||    
T  8065569 ttcaatatataccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattttt 8065644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8295061 - 8295140
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||  || ||||||||||||||||||||||||||| |||||||| |||||  ||||||||| ||||||    
T  8295061 ccaattcaatatattatacattgcatttatgatagtggagaatgcaccaatacttatcaagaggacttaaaacaattttt 8295140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 1825322 - 1825242
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgc--actaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||||  ||||||||||||||||  |||||||||| ||||||    
T  1825322 caattcaatatattccactttacatttatgaaagttgagaatgcatactaatacttaacaagtgcacttaaaactattttt 1825242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 30568692 - 30568774
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtgga----gaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| |||||||||||||||||||  ||    ||||||||||||||||||||| | |||||||||||||||||    
T  30568692 caattcaatatatttcactttgcatttatgatagcagagaatgaatgcactaatacttaacaataacacttaaaaccattttt 30568774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 50714615 - 50714691
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattt 78  Q
    |||||||||||||||||||||  |||||||||| ||| |||||||||| ||||| |||||| |||||||||| ||||    
T  50714615 caattcaatatattccactttcaatttatgataatggtgaatgcactactacttgacaagagcacttaaaactattt 50714691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 16493371 - 16493294
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||| |||||||||  |||||||||| ||||||| |||| | |||||||||||||||||    
T  16493371 ccaattcaatatattccactttgca-ttatgatagctgagaatgcacaaatactt-acaaaaacacttaaaaccattttt 16493294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 38977024 - 38977103
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggag-aatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||| |||||||||||| |||| ||||||| ||||||||| |||  |||||||||| ||||||    
T  38977024 caattcaatatattccactttacatttatgataggggagaaatgcaccaatacttaagaagtgcacttaaaactattttt 38977103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 26185215 - 26185293
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||| ||| ||||||||| |||||||||||||||||||||||  || ||||||||||||||  | ||||||||||||||    
T  26185215 caatgcaacatattccacgttgcatttatgatagtggagaatagaccaatacttaacaagagtatttaaaaccattttt 26185293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 37309731 - 37309809
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||  ||||||||||||||||||| |||||||||  |||||||||||||| || |||||  |||||||    
T  37309731 caattcaatatatttaactttgcatttatgatagtagagaatgcatcaatacttaacaagaacaattaaagtcattttt 37309809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 42185870 - 42185792
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| ||| ||| ||||||||||||||| |||  || |||||||||||||| ||||||||| |||||||    
T  42185870 caattcaatatatttcaccttgtatttatgatagtggataatagaccaatacttaacaagagcacttaaaatcattttt 42185792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 43335097 - 43335027
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    ||||||||||||||||||||| ||||||  ||| ||||||||||||||||| || |||||| |||||||||    
T  43335097 caattcaatatattccactttccatttaaaataatggagaatgcactaatatttgacaagaacacttaaaa 43335027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 48740554 - 48740604
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatac 53  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  48740554 aattcaatatattccactttacatttatgatagtggagaatgcaccaatac 48740604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 31862828 - 31862900
Alignment:
Q  8 aatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||| |||||||||| ||| ||||  ||||||||||||||  | ||||||||||||||    
T  31862828 aatatattccactttgcatctatgatagtgaagagtgcatcaatacttaacaagagaaattaaaaccattttt 31862900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 18509877 - 18509944
Alignment:
Q  5 ttcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    ||||||||||||||||||| ||||||| |||| || ||||||| ||||||||||||||  ||||||||    
T  18509877 ttcaatatattccactttgtatttatgttagtagataatgcaccaatacttaacaagaatacttaaaa 18509944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 29644388 - 29644439
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatac 53  Q
    ||||||||||||||| ||||| ||||||||||||| ||||||||||||||||    
T  29644388 caattcaatatattctactttacatttatgatagtagagaatgcactaatac 29644439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 26799290 - 26799212
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| | |||||||||||||||||||| ||| ||  ||||||||| |||| |||||||| | ||||||    
T  26799290 caattcaatatattctattttgcatttatgatagtggaaaatacatcaatacttaaaaagaacacttaaatctattttt 26799212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 34021070 - 34021140
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    ||||||||||||||  ||||||||||||||||||| |||||||||| |||||  ||||||| |||| ||||    
T  34021070 caattcaatatattagactttgcatttatgatagtagagaatgcaccaataccgaacaagaacactgaaaa 34021140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 51527451 - 51527501
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaata 52  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| ||||    
T  51527451 caattcaatatatttcactttacatttatgatagtggagaatgcaccaata 51527501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 44020835 - 44020782
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatactta 56  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||| ||||||||    
T  44020835 aattcaatatgttccactttacatttatgatagtggataatgcaccaatactta 44020782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 1796317 - 1796282
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagt 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  1796317 ccaattcaatatattccactttgcatttatgatagt 1796282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43421332 - 43421375
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatg 44  Q
    ||||||||||||||| || |||||||||||||||||||||||||    
T  43421332 ccaattcaatatatttcattttgcatttatgatagtggagaatg 43421375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 14009708 - 14009650
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaa 60  Q
    |||||||||||||| || ||||||||||| |||||||||||| ||  ||||||||||||    
T  14009708 caattcaatatatttcattttgcatttataatagtggagaatacatcaatacttaacaa 14009650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 21240934 - 21241004
Alignment:
Q  10 tatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||| |||||||||||||||||| ||| ||||  || ||||||| |||||| |||||||||| ||||||    
T  21240934 tatatttcactttgcatttatgataatggtgaattgaccaatacttgacaagagcacttaaaactattttt 21241004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 25902537 - 25902459
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatttt 79  Q
    |||||||||||||||| |||||  |||||| | |  | |||||||||||||||||||||| | |||| |||||||||||    
T  25902537 ccaattcaatatattcaactttatatttataacaaagaagaatgcactaatacttaacaaaaacactcaaaaccatttt 25902459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 36047174 - 36047124
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaata 52  Q
    ||||||||||||||| |||||||||||||||||  | ||||||||||||||    
T  36047174 caattcaatatattctactttgcatttatgataaagaagaatgcactaata 36047124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 38160226 - 38160148
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| ||||||| |||||||||| |||||||||||  |||| || ||||   |||||||||| ||||||    
T  38160226 caattcaatatatttcactttgtatttatgataatggagaatgcatcaatatttgacaaagacacttaaaacaattttt 38160148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 39258346 - 39258266
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaata---cttaacaagatcacttaaaaccatttt 79  Q
    ||||| ||||||||||| ||| |||||||||||||  ||||||||| ||||   |||||||||| ||||||||| ||||||    
T  39258346 caatttaatatattccattttacatttatgatagtaaagaatgcacgaatagtgcttaacaagagcacttaaaatcatttt 39258266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 6506185 - 6506128
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaa 60  Q
    |||||||  ||||||| ||||||||||||||||| |||||||||| |||| |||||||    
T  6506185 aattcaaagtattccattttgcatttatgatagtagagaatgcacaaatatttaacaa 6506128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 25581381 - 25581324
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaa 60  Q
    |||||||||||||| ||||||| |||| |||| |||||||| ||||||||||| ||||    
T  25581381 aattcaatatattctactttgcttttaagataatggagaatacactaatacttcacaa 25581324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 27790493 - 27790416
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||| ||||||||| | |||||||||| |||  ||| ||||||||||||| || |||||| ||||||||| |||||||    
T  27790493 aatttaatatattcaattttgcatttaagatgatggtgaatgcactaatatttgacaagagcacttaaaatcattttt 27790416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 32559197 - 32559254
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaa 60  Q
    |||| ||||||||||| |||||| |||| |||||||||||| || |||||||||||||    
T  32559197 aatttaatatattccattttgcacttattatagtggagaatacattaatacttaacaa 32559254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 51572303 - 51572246
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaac 58  Q
    ||||||||||||||| |||||| ||||||||||||| || ||||||| ||||| ||||    
T  51572303 ccaattcaatatattacactttacatttatgatagtagaaaatgcaccaatacataac 51572246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 16493259 - 16493215
Alignment:
Q  80 tgtgaaatgaaaaaatggctcagctaatttgggacggaggaagta 124  Q
    ||||||||||||||||||||||||||||| |||| ||||| ||||    
T  16493259 tgtgaaatgaaaaaatggctcagctaattcgggaaggagggagta 16493215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 35909641 - 35909589
Alignment:
Q  8 aatatattccactttgcatttatgatagtggagaatgcactaatacttaacaa 60  Q
    |||||||| |||||| ||||||| |||||||| ||||||| ||||||||||||    
T  35909641 aatatatttcactttacatttataatagtggaaaatgcaccaatacttaacaa 35909589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 47846933 - 47847000
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaa 71  Q
    ||||||||||||| |||||||||||||||||| | |||||||||| ||||| ||| |||| || |||||    
T  47846933 aattcaatatatttcactttgcatttatgata-tagagaatgcacaaatacataagaagagcatttaaa 47847000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 38319944 - 38319994
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaata 52  Q
    ||||||||||||||| |||||||||||||||||  | ||||||||| ||||    
T  38319944 caattcaatatattctactttgcatttatgataaagaagaatgcaccaata 38319994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 8759811 - 8759844
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgata 34  Q
    |||||||||||||||| |||||||||||||||||    
T  8759811 ccaattcaatatattctactttgcatttatgata 8759844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 25149483 - 25149516
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgata 34  Q
    |||||||||||||||||||||| |||||||||||    
T  25149483 ccaattcaatatattccactttacatttatgata 25149516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 29136862 - 29136785
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||| |||||||||||||||||||||  || ||||||||   ||||| |||| |   |||||||||||||||    
T  29136862 aattcaatatcttccactttgcatttatgataaaggtgaatgcacccgtacttgacaaaaatgcttaaaaccattttt 29136785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 39052975 - 39052922
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatactt 55  Q
    ||||||||||||||| ||||| |||||||||||  | ||||||||| |||||||    
T  39052975 caattcaatatattctactttacatttatgataaagaagaatgcaccaatactt 39052922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 42132845 - 42132878
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgata 34  Q
    |||||||||||||||| |||||||||||||||||    
T  42132845 ccaattcaatatattctactttgcatttatgata 42132878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 4357618 - 4357670
Alignment:
Q  20 tttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    |||| ||||||||||||| ||||| ||| |||||||||||| | |||||||||    
T  4357618 tttgtatttatgatagtgaagaatccaccaatacttaacaaaaacacttaaaa 4357670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 18849720 - 18849676
Alignment:
Q  80 tgtgaaatgaaaaaatggctcagctaatttgggacggaggaagta 124  Q
    |||||||| ||||||||||| |||||||| |||||||||| ||||    
T  18849720 tgtgaaataaaaaaatggcttagctaattcgggacggagggagta 18849676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 22020584 - 22020552
Alignment:
Q  2 caattcaatatattccactttgcatttatgata 34  Q
    ||||||||||||||| |||||||||||||||||    
T  22020584 caattcaatatattctactttgcatttatgata 22020552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 37315997 - 37315941
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaa 57  Q
    ||||||||| |||||| |||||||||||||||||  | | |||||||||||| ||||    
T  37315997 ccaattcaacatattctactttgcatttatgataaagaaaaatgcactaatagttaa 37315941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 40881256 - 40881208
Alignment:
Q  12 tattccactttgcatttatgatagtggagaatgcactaatacttaacaa 60  Q
    ||||||||||| |||||||||||||||||||| ||  |||| |||||||    
T  40881256 tattccactttacatttatgatagtggagaatacatcaatatttaacaa 40881208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 53848679 - 53848711
Alignment:
Q  2 caattcaatatattccactttgcatttatgata 34  Q
    ||||||||||||||| |||||||||||||||||    
T  53848679 caattcaatatattctactttgcatttatgata 53848711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 3e-28; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 3100432 - 3100511
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||    
T  3100432 ccaatttaatatattccactttgcatttatgatagtggagaatgcagcaatacttaacaagatcacttaaaatcattttt 3100511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 23684992 - 23685063
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaac 73  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  23684992 caattcaatatatttcactttgcatttatgatagtggagaatgcactaatacttaacaaaaacacttaaaac 23685063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 44534558 - 44534479
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| || |||||| |||||||    
T  44534558 ccaattcaatatattccactttgcatttatgatagtggagaatgtaccaatacttaacaagaacatttaaaatcattttt 44534479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 2882018 - 2882096
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||    
T  2882018 caatacaatatatttcactttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaatcattttt 2882096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 5212032 - 5211954
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| ||||||    
T  5212032 caattcaatatattccactttgcatttatgatagttgataatgcacaaatacttaacaagagcacttaaaactattttt 5211954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 28301467 - 28301545
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| |||||||||||||||||||||||||||  || |||||||||||||| |||||||||||||||||    
T  28301467 caattcaatatatttcactttgcatttatgatagtggagaatagaccaatacttaacaagagcacttaaaaccattttt 28301545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 28572240 - 28572318
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatttt 79  Q
    ||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  28572240 ccaattcaatatatttcattttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaatcatttt 28572318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 435152 - 435072
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatttttgt 82  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||  |||||||||| ||||||||    
T  435152 caattcaatatatttcactttacatttatgatagtggagaatgcactaatatttaacaagtgcacttaaaactatttttgt 435072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 18181288 - 18181209
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||    
T  18181288 ccaattcaaaatattctactttgcatttatgatagtggagaatgcaccaatacataacaaaagcacttaaaaccattttt 18181209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 7650049 - 7649979
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||| |||||||||    
T  7650049 caattcaatatattccactttgcatttatgatagtggagaatgcatcagtacttaacaagagcacttaaaa 7649979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 28108449 - 28108371
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||  |||||||||| ||||||    
T  28108449 caattcaatatattccactttacatgtatgatagtggagaatgcaccaatacttaacaagtgcacttaaaactattttt 28108371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 33602292 - 33602222
Alignment:
Q  10 tatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||    
T  33602292 tatattccactttgcatttatgatggtgaagaatgcactaatacataacaagagcacttaaaaccattttt 33602222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 37247958 - 37247880
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| |||||||||||||||||||||||||||  || |||||||||||||| |||||||||| ||||||    
T  37247958 caattcaatatatttcactttgcatttatgatagtggagaatagaccaatacttaacaagagcacttaaaactattttt 37247880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 565135 - 565200
Alignment:
Q  15 tccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||    
T  565135 tccactttgcatttatgatagtggagaatgcaccaatacttaacaagaacacttaaaatcattttt 565200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 28526996 - 28527075
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||| |||||||| ||| |||| ||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  28526996 ccaattcaatatagtccactttacatatatggtagtgaagaatgcacgaatacttaacaagagcacttaaaaccattttt 28527075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 30757643 - 30757564
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||| ||||||||||||||  |||||||||| ||||||    
T  30757643 ccaattcaatatattccaatttacatttatgatagtggaaaatgcattaatacttaacaagtgcacttaaaactattttt 30757564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 8550715 - 8550638
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||  ||||||||||||||||| |||||||||||| ||||||| |||||| |||||||||||| ||||    
T  8550715 aattcaatatattagactttgcatttatgataatggagaatgcacaaatacttgacaagaacacttaaaaccactttt 8550638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 36396531 - 36396454
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||| ||||||||  ||||||||||||||| ||||||||||||||||||||| | ||||| |||||||||||||||||    
T  36396531 aatttaatatattatactttgcatttatgacagtggagaatgcactaatactcatcaagagcacttaaaaccattttt 36396454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 31546086 - 31546014
Alignment:
Q  8 aatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||||||||| ||||    
T  31546086 aatatattccactttgcatttgtgatagtggagagtgcatcaatatttaacaagatcacttaaaaccactttt 31546014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 28925923 - 28925844
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| |||||| || ||||||||||||||||||||  |||||||||||||  |||||||||| ||||||    
T  28925923 ccaattcaatatatttcactttacaattatgatagtggagaatgcatcaatacttaacaagtgcacttaaaactattttt 28925844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 41436112 - 41436182
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||  |||||||||||| | |||||||||    
T  41436112 caattcaatatattccactttgcatttatgatagtgaagaatacatcaatacttaacaaaaacacttaaaa 41436182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 11726795 - 11726718
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| |||||||| |||||||||||||||||||| |||||| |||||| |  ||||||||| ||||||    
T  11726795 aattcaatatattctactttgcaattatgatagtggagaatgcattaatacataacaatagtacttaaaactattttt 11726718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 24775881 - 24775812
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    ||||||||||||| |||||| |||||||||||||||||||| ||| |||||||||||||  |||||||||    
T  24775881 aattcaatatatttcactttacatttatgatagtggagaatacaccaatacttaacaagtgcacttaaaa 24775812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 8031774 - 8031852
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||  ||||||||||||||||| |||||||| ||  |||||||||||||| ||| ||||| |||||||    
T  8031774 caattcaatatatttaactttgcatttatgataatggagaatacatcaatacttaacaagaacacataaaatcattttt 8031852  T

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Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 10818655 - 10818732
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||| ||| |||||||||||||||||| | |||||||||| ||||||||||||||   | |||||||||||||    
T  10818655 aattcaatacatttcactttgcatttatgatactagagaatgcaccaatacttaacaagagtgcataaaaccattttt 10818732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 36103374 - 36103297
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||| |||  ||| ||||||||||||||||||   ||||||||||||| ||||||||| |||||||    
T  36103374 aattcaatatattccattttatattcatgatagtggagaatgcatcgatacttaacaagaacacttaaaatcattttt 36103297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 2756706 - 2756777
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    |||||| ||||||||| ||||| ||||||||||| |||  ||||||||||||||| |||||| |||||||||    
T  2756706 ccaatttaatatattctactttacatttatgataatggtaaatgcactaatacttgacaagagcacttaaaa 2756777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 10069659 - 10069581
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| ||||||||||||||||| |||  ||||||| ||||||| |||| |  |||||||| |||||||    
T  10069659 caattcaatatattcgactttgcatttatgataatggtaaatgcacaaatacttgacaaaagtacttaaaatcattttt 10069581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 39095664 - 39095706
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatg 44  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  39095664 caattcaatatattccactttgcatttatgataatggagaatg 39095706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 43077800 - 43077722
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| |||||| ||||||||| |||||| ||||||| |||| ||||||||  || ||||||| ||||||    
T  43077800 caattcaatatatttcactttacatttatgacagtggaaaatgcaccaatagttaacaagtacatttaaaactattttt 43077722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 44194684 - 44194750
Alignment:
Q  7 caatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaac 73  Q
    |||||||||||||||||||||||||||||  ||||||||||  || |||||||||| ||| ||||||    
T  44194684 caatatattccactttgcatttatgataggcgagaatgcaccgatgcttaacaagaacacataaaac 44194750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 28572353 - 28572398
Alignment:
Q  80 tgtgaaatgaaaaaatggctcagctaatttgggacggaggaagtaa 125  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||    
T  28572353 tgtgaaatgaaaaaatggctcagctaattcgggacggagggagtaa 28572398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 33755293 - 33755368
Alignment:
Q  5 ttcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| ||||||||||||||||   |||||  || |||||||||||| | ||||||||| |||||||    
T  33755293 ttcaatatattccattttgcatttatgatagaaaagaatagaccaatacttaacaataacacttaaaatcattttt 33755368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1908569 - 1908515
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatactt 55  Q
    |||||||||||||||| ||||| |||||||||||  | |||||||||||||||||    
T  1908569 ccaattcaatatattctactttacatttatgataaagaagaatgcactaatactt 1908515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 43950522 - 43950444
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| |||||||||||||| || |||| ||| ||  |||||||||||| | || ||||||| ||||||    
T  43950522 caattcaatatattctactttgcatttatgttaatggaaaatacatcaatacttaacaaaaacatttaaaactattttt 43950444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 6972614 - 6972537
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatttt 79  Q
    ||||||||||||||| |||||||||||||||||  | ||||||||| |||| || | |||  |||| |||||||||||    
T  6972614 caattcaatatattctactttgcatttatgataaagaagaatgcacaaatagttgataagggcactcaaaaccatttt 6972537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 4794606 - 4794638
Alignment:
Q  2 caattcaatatattccactttgcatttatgata 34  Q
    |||||||||||||||||||||||||||||||||    
T  4794606 caattcaatatattccactttgcatttatgata 4794638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 13375264 - 13375212
Alignment:
Q  2 caattcaatatattc-cactttgcatttatgatagtggagaatgcactaatac 53  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||| |||||    
T  13375264 caattcaatatattttcactttacatttatgatagtggagaatgcaccaatac 13375212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 3123687 - 3123734
Alignment:
Q  10 tatattccactttgcatttatgatagtggagaatgcactaatacttaa 57  Q
    ||||||||| |||| ||||||||||||| ||||||||| |||||||||    
T  3123687 tatattccattttgtatttatgatagtgaagaatgcaccaatacttaa 3123734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 119
Target Start/End: Complemental strand, 5211919 - 5211880
Alignment:
Q  80 tgtgaaatgaaaaaatggctcagctaatttgggacggagg 119  Q
    ||||||||||||||||||||| ||||||| ||||||||||    
T  5211919 tgtgaaatgaaaaaatggctcggctaattcgggacggagg 5211880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 15859415 - 15859341
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||| ||||||||||||   || ||||||||||| | |||||||||||| |  ||||||||| ||||||    
T  15859415 aattcaatatatttcactttgcattt---attgtggagaatgccccaatacttaacaaaagtacttaaaactattttt 15859341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 20027225 - 20027154
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    ||||||||||||  ||||||||| |||||||||| ||| |||||||  ||||||| |||| | |||||||||    
T  20027225 ccaattcaatatcctccactttgtatttatgataatggtgaatgcagcaatacttgacaaaaacacttaaaa 20027154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 43427161 - 43427110
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaata 52  Q
    |||||||||||||||| | |||||||||||||||  | ||||||||||||||    
T  43427161 ccaattcaatatattctattttgcatttatgataaagaagaatgcactaata 43427110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 2048325 - 2048403
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| |||||||||||||||||    ||||||||| |||| || | |||| |||| | ||||||||||    
T  2048325 caattcaatatattctactttgcatttatgataaacaagaatgcaccaatagttgataagagcactcataaccattttt 2048403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9724910 - 9724964
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatactt 55  Q
    |||||||||||||||| ||||| |||||||||||  | ||||||||| |||||||    
T  9724910 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatactt 9724964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 16865008 - 16864931
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| |||||| ||||||||| | |||  ||||||  ||||||| ||||||  ||||||||||||||||    
T  16865008 caattcaatatatttcactttacatttatga-aatggttaatgcatcaatacttgacaagaatacttaaaaccattttt 16864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 36155574 - 36155624
Alignment:
Q  30 tgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||| |||||||| ||| |||||||||||||| ||||||||| |||||||    
T  36155574 tgatattggagaatacaccaatacttaacaagagcacttaaaatcattttt 36155624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 314460 - 314537
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatttt 79  Q
    ||||||||||||||| |||||||||||||||||  | ||||||||  |||| || | |||  |||| |||||||||||    
T  314460 caattcaatatattctactttgcatttatgataaagaagaatgcatcaatagttgataagggcactcaaaaccatttt 314537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 6213923 - 6213846
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||| ||||||||| ||||||||||||||||| |||  |||| |  ||||||| || ||| ||||||||| |||||||    
T  6213923 aattgaatatattctactttgcatttatgataatggtaaatgaagcaatacttgacgagaacacttaaaatcattttt 6213846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 7931570 - 7931517
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatactt 55  Q
    ||||||||||||||  ||||| |||||||||||  | |||||||||||||||||    
T  7931570 caattcaatatattttactttacatttatgataaagaagaatgcactaatactt 7931517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 26273791 - 26273824
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgata 34  Q
    |||||||||||||||| |||||||||||||||||    
T  26273791 ccaattcaatatattctactttgcatttatgata 26273824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 44424337 - 44424261
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatttt 79  Q
    ||||||||||||||| ||||||||||||||||| |  | ||||||  ||||||| |||||| || | |||||||||||    
T  44424337 caattcaatatattcaactttgcatttatgataataaaaaatgcatcaatacttgacaaga-cattcaaaaccatttt 44424261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 12524325 - 12524357
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgat 33  Q
    |||||||||||| ||||||||||||||||||||    
T  12524325 ccaattcaatatcttccactttgcatttatgat 12524357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 19515914 - 19515974
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaaga 62  Q
    ||||||||||||||  ||||||||||||||||| || | |||| || ||||||| ||||||    
T  19515914 caattcaatatattttactttgcatttatgataatgaaaaatgaaccaatacttgacaaga 19515974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 8e-26; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26134778 - 26134699
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||| |||||||||| ||||||    
T  26134778 ccaattcaatatatttcactttgcatttatgatagtggagaatagactaatacttaacaagagcacttaaaacaattttt 26134699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9017833 - 9017912
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||| | |||||||||| ||||||    
T  9017833 ccaattcaatatatttcactttgcatttataatagtggagaatgcaccaatacttaacaaaagcacttaaaactattttt 9017912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 43639591 - 43639512
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||  |||||||||||| | |||||||||||||||||    
T  43639591 ccaattcaatatatttcactttgcatttatgatagtggaaaatgcatcaatacttaacaacagcacttaaaaccattttt 43639512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 54122299 - 54122220
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| | || ||||||| ||||||    
T  54122299 ccaattcaatatatttcactttgcatttatgatagtggagaatgcaccaatacttaacaaaaacatttaaaactattttt 54122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 5245445 - 5245523
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||| |||||||||| |||||||| ||| |||||||||||||| |||||||||| ||||||    
T  5245445 caattcaatatattccactttgtatttatgatattggagaatacaccaatacttaacaagagcacttaaaactattttt 5245523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 39866627 - 39866549
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||| |||| ||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||| ||||||    
T  39866627 caattcaatgtatttcactttgcatttatgatagtggagaatacaccaatacttaacaaaatcacttaaaactattttt 39866549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 54458383 - 54458305
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||  ||||||||||| ||||||||||| |||||||    
T  54458383 caattcaatatattccactttacatttatgataatggagaatgcacccatacttaacaaaatcacttaaaatcattttt 54458305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 17777066 - 17776990
Alignment:
Q  4 attcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| || | ||| |||||||||||||    
T  17777066 attcaatatattccactttgcatttatggtagtggagaatgcacaaatacttaaaaaaagcacctaaaaccattttt 17776990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 19078367 - 19078291
Alignment:
Q  4 attcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| || | ||| |||||||||||||    
T  19078367 attcaatatattccactttgcatttatggtagtggagaatgcacaaatacttaaaaaaagcacctaaaaccattttt 19078291  T

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Target: chr3; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 33994693 - 33994760
Alignment:
Q  5 ttcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||  |||||||||    
T  33994693 ttcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaa 33994760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 11251201 - 11251123
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||| |||||| | || |||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||    
T  11251201 caatttaatatagttcaatttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaatcattttt 11251123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 21296578 - 21296500
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatttt 79  Q
    |||||||||||||||| |||||||||||||||||||| | ||||||| |||||||||||||| || |||||| ||||||    
T  21296578 ccaattcaatatattctactttgcatttatgatagtgaaaaatgcaccaatacttaacaagagcatttaaaatcatttt 21296500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 36097729 - 36097651
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||| | | ||||||||||||||  |||||||||||||  ||||||||||||||||    
T  36097729 caattcaatatattccactttgcatttctaacagtggagaatgcaccgatacttaacaagagtacttaaaaccattttt 36097651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 32827377 - 32827300
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||| |||||| |||||||||||||||||||||||| ||||| |||||||  |||||||||| ||||||    
T  32827377 aattcaatatatttcactttacatttatgatagtggagaatgcaccaatacgtaacaagtgcacttaaaactattttt 32827300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 32023175 - 32023104
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaac 73  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||| |  |||||||||    
T  32023175 caattcaatatattcaactttgcatttataatagtggagaatgcaccaatacttaacaaaagtacttaaaac 32023104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 1772180 - 1772102
Alignment:
Q  3 aattcaatatattc-cactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||| || |||||||| ||||||||||||||||||  || |||||||||||||| |||||||||||||||||    
T  1772180 aattcaatataatcacactttgcttttatgatagtggagaatataccaatacttaacaagaacacttaaaaccattttt 1772102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 10855027 - 10855105
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||| ||||| ||| || | |||||||||| ||||||    
T  10855027 caattcaatatattccactttgcatttatgagagtggataatgcaccaatacataataaaaacacttaaaactattttt 10855105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 14756188 - 14756118
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| || | |||||||||||| |||||||||    
T  14756188 caatttaatatattctactttgcatttatgatagtggagaatgtaccagtacttaacaagagcacttaaaa 14756118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 46786056 - 46785975
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaat--acttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| |||||||||||||||||||||||||||  || |||  |||||||||||||| ||||||| ||||||    
T  46786056 ccaattcaatatatttcactttgcatttatgatagtggagaatataccaatacacttaacaagatcatttaaaactattttt 46785975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 48744292 - 48744370
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| |||||| |||||||||||||||||||||||  ||||||||||||   |||||||||| ||||||    
T  48744292 caattcaatatatttcactttacatttatgatagtggagaatgcatcaatacttaacaaatgcacttaaaactattttt 48744370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 52325210 - 52325288
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| ||||| |||||| | |||| |||||| |||||    
T  52325210 caattcaatatattccactttgcatttatgatagcgtagaatgcaccaatacataacaataacactaaaaacccttttt 52325288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 53876510 - 53876432
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| |||||| |||||||||||||||| ||||||| |||| ||||||| | ||||||||| |||||||    
T  53876510 caattcaatatatttcactttacatttatgatagtggaaaatgcacaaatatttaacaaaagcacttaaaatcattttt 53876432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 22202463 - 22202403
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaaga 62  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||    
T  22202463 caatttaatatattcaactttgcatttatgatagtggataatgcaccaatacttaacaaga 22202403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2868606 - 2868685
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||| || ||||||||||||||||||||| |||||||||||||  ||||| |||||| |  ||||||||||||||||    
T  2868606 ccaattcgatttattccactttgcatttatgacagtggagaatgcagcaatacataacaaaagaacttaaaaccattttt 2868685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 54845589 - 54845512
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||||||||||| | |||||||||   || |||||||| | |||||||||| ||||||    
T  54845589 aattcaatatattccactttgcatttatgatactagagaatgcatcgatccttaacaaaaacacttaaaactattttt 54845512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 41031604 - 41031686
Alignment:
Q  1 ccaattcaatatattccactttgcatttat---gatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| |||||| |||||||   ||||||||| ||||||| |||||||||||||  |||||||||| ||||||    
T  41031604 ccaattcaatatatttcactttacatttattatgatagtggaaaatgcaccaatacttaacaagtgcacttaaaactattttt 41031686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 54493940 - 54494012
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaac 73  Q
    |||||| |||||||| |||||| |||||||||||||||||||| | | |||||||||||||  ||||||||||    
T  54493940 ccaatttaatatatttcactttacatttatgatagtggagaatacgccaatacttaacaagtgcacttaaaac 54494012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 11529184 - 11529125
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaaga 62  Q
    |||| ||||||||||||||||||||||||||| ||||||||| |  ||||||||||||||    
T  11529184 aatttaatatattccactttgcatttatgatattggagaatgtatcaatacttaacaaga 11529125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 15280637 - 15280715
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||  ||| | ||||||  ||||||||| |||||||    
T  15280637 ccaattcaatatattccactttccatttatgatagtggagaatacac-gatagtgaacaagtgcacttaaaatcattttt 15280715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 26832103 - 26832182
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||| |||||||| ||||||||||||||| | ||||||||||||  ||||||||| |||| ||| |||||| ||||||    
T  26832103 ccaatttaatatatttcactttgcatttatggtggtggagaatgcatcaatacttaataagagcacgtaaaactattttt 26832182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 54782995 - 54783074
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||| |||||| |||||||||||| | | ||||||| ||||||||| |||  |||||||||| ||||||    
T  54782995 ccaattcaatatatttcactttacatttatgatagcgcataatgcaccaatacttaagaagtgcacttaaaactattttt 54783074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 55415513 - 55415435
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||| |  ||||||| ||||||||||||  ||||||||| |||||||||||| | || ||||||||||||||    
T  55415513 caattcaatatgtgtcactttgtatttatgatagtaaagaatgcaccaatacttaacaaaaacagttaaaaccattttt 55415435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 45392122 - 45392199
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattt 78  Q
    ||||||||||||||| |||||| |||||| |||||| || ||||||| |||| |||||||  ||||||||||| ||||    
T  45392122 ccaattcaatatatttcactttacatttacgatagtagataatgcaccaatagttaacaaattcacttaaaactattt 45392199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 39329824 - 39329764
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaaga 62  Q
    ||||||||||||||| |||||||||||||||||    ||||||||| ||||||||||||||    
T  39329824 caattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaacaaga 39329764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 44219108 - 44219031
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||| |||||| |||||||||| ||| |||||||| || |||| |||||| |||| ||||||||||||    
T  44219108 ccaattcaatatattctactttgtatttatgataatggggaatgcaccaacactt-acaaga-cactcaaaaccattttt 44219031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 15082035 - 15082109
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccat 76  Q
    ||||| |||||||| || ||||| ||||||||| |||||||||||| |||| ||||  ||| |||||||||||||    
T  15082035 caatttaatatatttcattttgcttttatgataatggagaatgcaccaatatttaaagagagcacttaaaaccat 15082109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 26142950 - 26142992
Alignment:
Q  20 tttgcatttatgatagtggagaatgcactaatacttaacaaga 62  Q
    |||||||||||||||||||||||||||| ||||||||| ||||    
T  26142950 tttgcatttatgatagtggagaatgcaccaatacttaaaaaga 26142992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 12744848 - 12744897
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaata 52  Q
    ||||||||||| |||||||||||||| | |||||||||||||||| ||||    
T  12744848 aattcaatataatccactttgcatttctaatagtggagaatgcaccaata 12744897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 8706190 - 8706255
Alignment:
Q  9 atatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattt 78  Q
    |||||||||||||||||||||||    || ||||||||  |||||||||||||| ||||||||| |||||    
T  8706190 atatattccactttgcatttatg----tgaagaatgcatcaatacttaacaagagcacttaaaatcattt 8706255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 9058077 - 9058142
Alignment:
Q  9 atatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattt 78  Q
    |||||||||||||||||||||||    || ||||||||  |||||||||||||| ||||||||| |||||    
T  9058077 atatattccactttgcatttatg----tgaagaatgcatcaatacttaacaagagcacttaaaatcattt 9058142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 46627997 - 46627921
Alignment:
Q  4 attcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||  ||||||||||||||||| |||  ||| ||  ||||||| |||||| ||||||||| |||||||    
T  46627997 attcaatatattatactttgcatttatgataatggtaaatacatcaatacttgacaagaacacttaaaatcattttt 46627921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1334856 - 1334802
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatactt 55  Q
    |||||||||||||||| ||||| |||||||||||  | ||||||||| |||||||    
T  1334856 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatactt 1334802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1923122 - 1923168
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcac 47  Q
    |||||||||||||||| |||||||||||||||||  | |||||||||    
T  1923122 ccaattcaatatattctactttgcatttatgataaagaagaatgcac 1923168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 9218178 - 9218255
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||| ||||||| |||||||||||||||||    ||||||||| |||||||||| ||| |||| ||||| ||||||    
T  9218178 caattcattatattctactttgcatttatgataagaaagaatgcaccaatacttaacgaga-cactcaaaactattttt 9218255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 29858938 - 29858864
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatt 77  Q
    |||||||||||||| ||||| |||||||||||  | |||||| || ||||||| |||| | |||| |||||||||    
T  29858938 aattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgacaaaaacactcaaaaccatt 29858864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37041948 - 37041906
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaat 43  Q
    ||||||||||||||| ||||||  |||||||||||||||||||    
T  37041948 ccaattcaatatatttcactttatatttatgatagtggagaat 37041906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 44234123 - 44234193
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaa 72  Q
    |||||||||||||| ||||||||||||| |||| || |||| | || ||||||||| |||| || ||||||    
T  44234123 caattcaatatatttcactttgcatttacgataatgaagaacgtaccaatacttaataagaacatttaaaa 44234193  T

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Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 42547181 - 42547120
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaaga 62  Q
    ||||||||||||||||   |||||||||||||||    ||||||||| ||||||||||||||    
T  42547181 ccaattcaatatattctcttttgcatttatgataagaaagaatgcaccaatacttaacaaga 42547120  T

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Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 53754137 - 53754084
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatactta 56  Q
    |||||||||||||| ||||| |||||||||||  | ||||||||| ||||||||    
T  53754137 aattcaatatattctactttacatttatgataaagaagaatgcaccaatactta 53754084  T

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Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 46194280 - 46194248
Alignment:
Q  2 caattcaatatattccactttgcatttatgata 34  Q
    ||||||||||||||| |||||||||||||||||    
T  46194280 caattcaatatattctactttgcatttatgata 46194248  T

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Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 51164986 - 51165038
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatactt 55  Q
    |||||||||||||| ||||| |||||||||||  | ||||||||| |||||||    
T  51164986 aattcaatatattctactttacatttatgataaagaagaatgcaccaatactt 51165038  T

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Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 108
Target Start/End: Complemental strand, 54122185 - 54122157
Alignment:
Q  80 tgtgaaatgaaaaaatggctcagctaatt 108  Q
    |||||||||||||||||||||||||||||    
T  54122185 tgtgaaatgaaaaaatggctcagctaatt 54122157  T

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Target: scaffold0006 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 229855 - 229927
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaac 73  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  229855 ccaattcaatatataccactttgcatttatgataatggagaatgcaccaatacttaacaagagcacttaaaac 229927  T

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Target: scaffold0321 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 9617 - 9548
Alignment:
Q  11 atattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||||| |||||||| || ||||||||||||||| |||||||||||||||||    
T  9617 atattccactttgcatttatgataatggagaatacattaatacttaacaagagcacttaaaaccattttt 9548  T

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Target: scaffold0221 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 8920 - 8977
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaaca 59  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||    
T  8920 caattcaatatattccactttgcatttataatagtggagaatgcaccaatacataaca 8977  T

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Target: scaffold0028 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 26646 - 26702
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaac 58  Q
    ||||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  26646 caattcaatatattccactttgcatttatgatagtggagaatagaccaatacttaac 26702  T

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Target: scaffold0045 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 26354 - 26405
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaata 52  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  26354 ccaattcaatatattccactttacatttatgatagtggataatgcactaata 26405  T

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Target: scaffold0058 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 14489 - 14567
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||  |||||||| ||||  || ||||||| ||||||    
T  14489 caattcaatatattccactttacatttatgacagtggagaatgcatcaatacttagcaagtgcaattaaaactattttt 14567  T

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Target: scaffold0034 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 98858 - 98936
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||||||  |||||| || ||||| ||||||| |||||||| ||||| ||||||||| |||||||    
T  98858 caattcaatatattccactttatatttattatggtggataatgcaccaatacttatcaagagcacttaaaatcattttt 98936  T

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Target: scaffold0007 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 230288 - 230367
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||||||| |||||||||||||||   ||||||| ||  || ||||||||||  ||||||||||||||||    
T  230288 ccaattcaatatattccattttgcatttatgataacagagaatgtacccatgcttaacaagaatacttaaaaccattttt 230367  T

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Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 352536 - 352477
Alignment:
Q  1 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaa 60  Q
    |||||||||||||||| ||||| |||||||||||  | ||||||||| ||||||||||||    
T  352536 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaacaa 352477  T

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Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 171260 - 171337
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccattttt 80  Q
    |||||||||||||| ||||| ||||||||||| |||  || |||| ||||||| |||||| || |||||||| |||||    
T  171260 aattcaatatattctactttacatttatgataatggtaaacgcaccaatacttgacaagaacatttaaaacctttttt 171337  T

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Target: scaffold0262 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 12509 - 12435
Alignment:
Q  3 aattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagatcacttaaaaccatt 77  Q
    |||||||||||||| ||||| ||||||| |||  | ||||||||||||||||| ||||   |||| |||||||||    
T  12509 aattcaatatattctactttacatttataataaagaagaatgcactaatacttgacaaagacactcaaaaccatt 12435  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 394811 - 394869
Alignment:
Q  2 caattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaa 60  Q
    ||||||| |||||||||||||| ||||||||||| | |||||  || ||||||||||||    
T  394811 caattcactatattccactttgtatttatgatagagaagaatagaccaatacttaacaa 394869  T

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