View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19728_low_8 (Length: 337)
Name: NF19728_low_8
Description: NF19728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19728_low_8 |
 | |
|
| [»] chr7 (1 HSPs) |
| |
|
| [»] chr2 (4 HSPs) |
| |
|
| [»] scaffold0257 (1 HSPs) |
| | |
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Alignment Details
Target: chr3 (Bit Score: 277; Significance: 1e-155; HSPs: 28)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 333
Target Start/End: Complemental strand, 26109951 - 26109619
Alignment:
| Q |
1 |
tgttaagcatccttctgcccgtttaaaagacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaa |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
26109951 |
tgttaagcatccttctgtccgtttaaaagacacttcacttagtaatagatacaagggttgtgcctacaatttactagctgaactattgaaattcctcaaa |
26109852 |
T |
|
| Q |
101 |
acccatagtatattggaaggattggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatg |
200 |
Q |
| |
|
||||||| ||||||||||| ||| || |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26109851 |
acccataatatattggaagaattaggatcataccactctgaatttatggagttattacaagatgcgcacagctttggttttgataaggattggttggatg |
26109752 |
T |
|
| Q |
201 |
gtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattggattccaagcaacaggttaccaaggatgttgaagt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26109751 |
gtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttgcagaaattattggattccaagcaacaggttaccaaggatgttgaagc |
26109652 |
T |
|
| Q |
301 |
gttgcgtttgaaaataggcattttaagtcaaca |
333 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |
|
|
| T |
26109651 |
gttgcgtttgaagataggcattttaagtcaaca |
26109619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 333
Target Start/End: Complemental strand, 26204243 - 26203911
Alignment:
| Q |
1 |
tgttaagcatccttctgcccgtttaaaagacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaa |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
26204243 |
tgttaagcatccttctgtccgtttaaaagacacttcacttagtaatagatacaagggttgtgcctacaatttactagctgaactattgaaattcctcaaa |
26204144 |
T |
|
| Q |
101 |
acccatagtatattggaaggattggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatg |
200 |
Q |
| |
|
||||||| | ||||||||| ||| || |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26204143 |
acccataatgtattggaagtattaggctcattccactctgaatttctggagttattacaagatgcgcacagctttggttttgataaggattggttggatg |
26204044 |
T |
|
| Q |
201 |
gtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattggattccaagcaacaggttaccaaggatgttgaagt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26204043 |
gtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttgcagaaattattggattccaagcaacaggttaccaaggatgttgaagc |
26203944 |
T |
|
| Q |
301 |
gttgcgtttgaaaataggcattttaagtcaaca |
333 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |
|
|
| T |
26203943 |
gttgcgtttgaagataggcattttaagtcaaca |
26203911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 337
Target Start/End: Complemental strand, 26138835 - 26138514
Alignment:
| Q |
1 |
tgttaagcatccttctgcccgtttaaaagacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaa |
100 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26138835 |
tgttaagcatccttctatctgtttaaaagacacttcacttagtaatacatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaa |
26138736 |
T |
|
| Q |
101 |
acccatagtatattggaaggattggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatg |
200 |
Q |
| |
|
||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
26138735 |
acccatagtatattggaagtattgggcacattccactctgaatttgtggagttattacaagatgcacgaagctttggttttgataaggattggttggatg |
26138636 |
T |
|
| Q |
201 |
gtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattggattccaagcaacaggttaccaaggatgttgaagt |
300 |
Q |
| |
|
|||||||||||||||||||||| |||||||| | ||| |||||||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
26138635 |
gtgtcgaaaggcgggctttgtttcctgatattga--------aag-------gcagaaattattggattacaagcaacaggttaccaaggatgttgaatt |
26138551 |
T |
|
| Q |
301 |
gttgcgtttgaaaataggcattttaagtcaacatgtg |
337 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
26138550 |
gttgcacttgaagataggcattttaagtcaacatgtg |
26138514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 28508658 - 28508332
Alignment:
| Q |
1 |
tgttaagcatccttctgcccgtttaaaagacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaa |
100 |
Q |
| |
|
||||||| ||||||||| | ||| || |||||| ||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||| || |
|
|
| T |
28508658 |
tgttaagaatccttctgttcatttgaaggacactgcacttagtaatagatacaagggttgtgcctacaatttactagctgaactattgaaattccttgaa |
28508559 |
T |
|
| Q |
101 |
acccatagtatattggaaggattggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatg |
200 |
Q |
| |
|
||||||||||| ||||||| ||||||||| ||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
28508558 |
acccatagtatgttggaagtattggggtcgtgccactctaaatttgtggagttaatacaagatgcgcgcagctttggttttgataaggattggttggatg |
28508459 |
T |
|
| Q |
201 |
gtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattggattccaagcaacaggttaccaaggatgttgaagt |
300 |
Q |
| |
|
|||| || ||||| |||||||| ||||| ||| |||| || ||||||||||| || || ||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
28508458 |
gtgttgagaggcgcgctttgtttcctgaaataaaagtgtcccaagatgccttgcaaaatttattagattccaagcaacaggttaccaaggatgttgaagt |
28508359 |
T |
|
| Q |
301 |
gttgcgtttgaaaataggcattttaag |
327 |
Q |
| |
|
||||| ||||| |||||||||||||| |
|
|
| T |
28508358 |
cttgcgattgaagataggcattttaag |
28508332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 333
Target Start/End: Complemental strand, 26126728 - 26126396
Alignment:
| Q |
1 |
tgttaagcatccttctgcccgtttaaaagacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaa |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||| |||| |||||||| |||||| |
|
|
| T |
26126728 |
tgttaagcatccttctgtccgtttaaaagacacttcacttagtaatagatacaagggttgtgcttacaatttactagctgaactgttgaaatttctcaaa |
26126629 |
T |
|
| Q |
101 |
acccatagtatattggaaggattggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatg |
200 |
Q |
| |
|
||||| ||| | ||||||| ||||||||||| |||||||||||||| |||||||||||||||||| | || |||||||||||||||||||||||||||| |
|
|
| T |
26126628 |
acccacagtgtgttggaagtattggggtcattccactctgaatttgaggagttattacaagatgcacgaaggtttggttttgataaggattggttggatg |
26126529 |
T |
|
| Q |
201 |
gtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattggattccaagcaacaggttaccaaggatgttgaagt |
300 |
Q |
| |
|
||||||||||| | |||||| |||||||| ||||| || ||||||| ||| ||||| |||||||||||||| |||| |||||||| || |||||||| |
|
|
| T |
26126528 |
gtgtcgaaaggagcactttgtgtcctgatatgcaagtctctcaagatgtattaaagaaactattggattccaaggaacatgttaccaaagaagttgaagt |
26126429 |
T |
|
| Q |
301 |
gttgcgtttgaaaataggcattttaagtcaaca |
333 |
Q |
| |
|
|||||| ||||| ||||||||||||||| |||| |
|
|
| T |
26126428 |
gttgcgcttgaagataggcattttaagtgaaca |
26126396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 1 - 333
Target Start/End: Complemental strand, 26176779 - 26176447
Alignment:
| Q |
1 |
tgttaagcatccttctgcccgtttaaaagacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaa |
100 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||| ||||| |||||||| |||| ||||||||||||||| |
|
|
| T |
26176779 |
tgttaagcatccttctgtccgttttaaagacacttcacttagtaatagatacaagggttgtgcttacaatttactagctgaactgttgaaattcctcaaa |
26176680 |
T |
|
| Q |
101 |
acccatagtatattggaaggattggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatg |
200 |
Q |
| |
|
||||| ||| | ||||||| |||||| |||| |||||||||||||| |||||||||||||||||| | || |||||||||||||||||||||||||||| |
|
|
| T |
26176679 |
acccacagtgtgttggaagtattgggctcattccactctgaatttgaggagttattacaagatgcacgaaggtttggttttgataaggattggttggatg |
26176580 |
T |
|
| Q |
201 |
gtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattggattccaagcaacaggttaccaaggatgttgaagt |
300 |
Q |
| |
|
||||||||||| | |||||| |||||||| ||||| || ||||||| ||| ||||| |||||||||||||| |||| |||||||| || |||||||| |
|
|
| T |
26176579 |
gtgtcgaaaggagcactttgtgtcctgatatgcaagtttctcaagatgtattaaagaaactattggattccaaggaacatgttaccaaagaagttgaagt |
26176480 |
T |
|
| Q |
301 |
gttgcgtttgaaaataggcattttaagtcaaca |
333 |
Q |
| |
|
|||||| ||||| ||||||||||||||| |||| |
|
|
| T |
26176479 |
gttgcgcttgaagataggcattttaagtgaaca |
26176447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 333
Target Start/End: Complemental strand, 26232295 - 26231963
Alignment:
| Q |
1 |
tgttaagcatccttctgcccgtttaaaagacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaa |
100 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| ||||| |||||||||||||| |
|
|
| T |
26232295 |
tgttaagaatccttctgtccgtttaaaagacacttcacttagtaatagatacaagggttgtgcctacaatttattagctgaactactgaaattcctcaaa |
26232196 |
T |
|
| Q |
101 |
acccatagtatattggaaggattggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatg |
200 |
Q |
| |
|
|| |||||| | ||||||| |||||| |||| |||||||||||||| |||||||||||||||||| | || |||||||||||||||||||||||||||| |
|
|
| T |
26232195 |
actcatagtgtgttggaagtattgggctcattccactctgaatttgaggagttattacaagatgcacgaaggtttggttttgataaggattggttggatg |
26232096 |
T |
|
| Q |
201 |
gtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattggattccaagcaacaggttaccaaggatgttgaagt |
300 |
Q |
| |
|
||||||||||||| |||||| |||||||| |||| ||| ||||||| ||| ||||| |||||||||||||| |||| |||||||| || |||||||| |
|
|
| T |
26232095 |
gtgtcgaaaggcgcactttgtgtcctgatatgcaagaatctcaagatgtattaaagaaactattggattccaaggaacatgttaccaaagaagttgaagt |
26231996 |
T |
|
| Q |
301 |
gttgcgtttgaaaataggcattttaagtcaaca |
333 |
Q |
| |
|
|| || ||||| ||| ||||||| ||| |||| |
|
|
| T |
26231995 |
tttacgcttgaagatacgcattttgagtgaaca |
26231963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 9 - 337
Target Start/End: Original strand, 28136833 - 28137161
Alignment:
| Q |
9 |
atccttctgcccgtttaaaagacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaaacccatag |
108 |
Q |
| |
|
||||||||| ||||||||||||| |||||| ||||| ||| |||||||||||| |||||| || | || | |||||||||||||| |||| ||||| |
|
|
| T |
28136833 |
atccttctgttcgtttaaaagacaattcactgcgtaatagattcaagggttgtgcttacaacttattggcagagctattgaaattccttgaaactcatag |
28136932 |
T |
|
| Q |
109 |
tatattggaaggattggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatggtgtcgaa |
208 |
Q |
| |
|
| | ||||| | ||| || ||||||||||||||||||||||| || ||| |||||||| || |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
28136933 |
tgtcttggatgtattaggctcatgccactctgaatttgtggatctactactagatgcgcgcaactttggttttgataaggattggttggatagtgtcgaa |
28137032 |
T |
|
| Q |
209 |
aggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattggattccaagcaacaggttaccaaggatgttgaagtgttgcgtt |
308 |
Q |
| |
|
||||||||| |||| |||||||||||| |||| ||||| ||| | || ||||||||||||||||||||||| |||||||||| ||||||||||||| || |
|
|
| T |
28137033 |
aggcgggctatgtttcctgatatacaaatatctcaagacgccatgcaaaaattattggattccaagcaacaaattaccaaggaagttgaagtgttgcatt |
28137132 |
T |
|
| Q |
309 |
tgaaaataggcattttaagtcaacatgtg |
337 |
Q |
| |
|
| || |||| |||||||||||||||||| |
|
|
| T |
28137133 |
taaagatagagattttaagtcaacatgtg |
28137161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 9 - 204
Target Start/End: Complemental strand, 28479467 - 28479272
Alignment:
| Q |
9 |
atccttctgcccgtttaaaagacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaaacccatag |
108 |
Q |
| |
|
||||||||| |||||||| |||| | |||| |||||| |||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||| |
|
|
| T |
28479467 |
atccttctgttcgtttaaaggacattgcactgagtaatagatacaagggttgtgcctacaatttactagccgaactattgaaattccttgaaacccatag |
28479368 |
T |
|
| Q |
109 |
tatattggaaggattggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatggtgt |
204 |
Q |
| |
|
| | ||||||| ||||||| | ||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
28479367 |
tgtgttggaagtattggggccgtgccactctaaatttgtggagttattacaagatgcgcgcagctttggtttagataaggattggttggatggtgt |
28479272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 169 - 337
Target Start/End: Original strand, 27356917 - 27357085
Alignment:
| Q |
169 |
cagctttggttttgataaggattggttggatggtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattggat |
268 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| ||||| || |||||||| | |||||| |||| || |||||||| || || ||| | |||||| |
|
|
| T |
27356917 |
cagctttggttttgataaggattggttggatagtgttgaaagacgtgctttgttttcggatataaaagtctctcaagatgcattgcaaaaactgttggat |
27357016 |
T |
|
| Q |
269 |
tccaagcaacaggttaccaaggatgttgaagtgttgcgtttgaaaataggcattttaagtcaacatgtg |
337 |
Q |
| |
|
||||||||||| || |||| || ||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
27357017 |
tccaagcaacaagtctccaaagaagttgaagtgttgcgtttgaaaatagacattttaagtcaacatgtg |
27357085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 28187167 - 28187433
Alignment:
| Q |
1 |
tgttaagcatccttctgcccgtttaaaagacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaa |
100 |
Q |
| |
|
||||||||||||||| | | |||||| ||||||||| | ||||| |||||||||||| |||||||||| |||||| | ||||||||||||||| || |
|
|
| T |
28187167 |
tgttaagcatccttcggttcttttaaacgacacttcattgagtaacagatacaagggttatgcctacaactgcctagctgagctattgaaattcctccaa |
28187266 |
T |
|
| Q |
101 |
acccatagtatattggaaggattggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatg |
200 |
Q |
| |
|
|| |||||| | ||||| | || || ||| |||||||||||||||| |||||||||||||||| || || ||||||||||||||||| |||||||||| |
|
|
| T |
28187267 |
actcatagtgtgttggatgtgttaggttcaagccactctgaatttgttgagttattacaagatgtgcgcaaatttggttttgataaggaatggttggatg |
28187366 |
T |
|
| Q |
201 |
gtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattgga |
267 |
Q |
| |
|
| | |||| || |||||||| |||| | ||||||| || |||||||| || || ||||| ||||| |
|
|
| T |
28187367 |
atattgaaaaacgcgctttgttgcctggtttacaagtctctcaagatgcattgcaaaaattgttgga |
28187433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 243 - 337
Target Start/End: Complemental strand, 28479260 - 28479166
Alignment:
| Q |
243 |
aagatgccttacagaaattattggattccaagcaacaggttaccaaggatgttgaagtgttgcgtttgaaaataggcattttaagtcaacatgtg |
337 |
Q |
| |
|
|||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
28479260 |
aagatgccttgcaaaaattattggattcaaagcaacaggttaccaaggatgttgaagtgttgcgtttgaagataggcattttaagtcaacatgtg |
28479166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 28057693 - 28057959
Alignment:
| Q |
1 |
tgttaagcatccttctgcccgtttaaaagacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaa |
100 |
Q |
| |
|
|||||| |||||||||| ||||| || ||||||||| | ||||| |||||||||||| ||||||||| |||||| | ||||||||||||||| || |
|
|
| T |
28057693 |
tgttaaacatccttctgttcgtttgaaggacacttcattgagtaacagatacaagggttatgcctacaattgcctagctgagctattgaaattcctccaa |
28057792 |
T |
|
| Q |
101 |
acccatagtatattggaaggattggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatg |
200 |
Q |
| |
|
|| |||||| | ||||| | || || ||| |||||||||||||||| |||||||||||||||| || || ||||||||||||||||| |||||||||| |
|
|
| T |
28057793 |
actcatagtgtgttggatgtgttaggttcaagccactctgaatttgttgagttattacaagatgtgcgcaaatttggttttgataaggaatggttggatg |
28057892 |
T |
|
| Q |
201 |
gtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattgga |
267 |
Q |
| |
|
| | |||| || | |||||| |||| | ||||||| || |||||||| || || ||||| ||||| |
|
|
| T |
28057893 |
atattgaaaaacgcgttttgttgcctggtttacaagtctctcaagatgcattgcaaaaattgttgga |
28057959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 28068118 - 28068384
Alignment:
| Q |
1 |
tgttaagcatccttctgcccgtttaaaagacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaa |
100 |
Q |
| |
|
|||||| |||||||||| ||||| || ||||||||| | ||||| |||||||||||| ||||||||| |||||| | ||||||||||||||| || |
|
|
| T |
28068118 |
tgttaaacatccttctgttcgtttgaaggacacttcattgagtaacagatacaagggttatgcctacaattgcctagctgagctattgaaattcctccaa |
28068217 |
T |
|
| Q |
101 |
acccatagtatattggaaggattggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatg |
200 |
Q |
| |
|
|| |||||| | ||||| | || || ||| |||||||||||||||| |||||||||||||||| || || ||||||||||||||||| |||||||||| |
|
|
| T |
28068218 |
actcatagtgtgttggatgtgttaggttcaagccactctgaatttgttgagttattacaagatgtgcgcaaatttggttttgataaggaatggttggatg |
28068317 |
T |
|
| Q |
201 |
gtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattgga |
267 |
Q |
| |
|
| | |||| || | |||||| |||| | ||||||| || |||||||| || || ||||| ||||| |
|
|
| T |
28068318 |
atattgaaaaacgcgttttgttgcctggtttacaagtctctcaagatgcattgcaaaaattgttgga |
28068384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 29 - 279
Target Start/End: Original strand, 27777077 - 27777327
Alignment:
| Q |
29 |
gacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaaacccatagtatattggaaggattggggt |
128 |
Q |
| |
|
||||||||||| |||||| |||||||| ||| | |||||||| || ||| | ||||||||||||||| ||| ||||||| | ||||| | || || | |
|
|
| T |
27777077 |
gacacttcactgagtaatagatacaagagttattcctacaactgtcttgctgagctattgaaattcctccaaaaccatagtgtgttggatgtgttaggtt |
27777176 |
T |
|
| Q |
129 |
catgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatggtgtcgaaaggcgggctttgttccctga |
228 |
Q |
| |
|
|| ||| |||||| |||| |||||||||||||||| | ||| | |||||||||||| ||||||||||||||||| |||| || |||||||| |||| |
|
|
| T |
27777177 |
caagccgctctgagtttgatgagttattacaagatgtacgcagatgtggttttgataaagattggttggatggtgttgaaaaacgtgctttgttttctga |
27777276 |
T |
|
| Q |
229 |
tatacaagtatcacaagatgccttacagaaattattggattccaagcaaca |
279 |
Q |
| |
|
||||||| | || |||| ||| ||||| ||| ||||||||||| ||||||| |
|
|
| T |
27777277 |
tatacaattctctcaagttgcattacaaaaactattggattcccagcaaca |
27777327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 33 - 277
Target Start/End: Complemental strand, 8538703 - 8538459
Alignment:
| Q |
33 |
cttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaaacccatagtatattggaaggattggggtcatg |
132 |
Q |
| |
|
||||||| ||||| |||||||||||| |||||||||| |||||| | ||||||||||||||| |||| |||| | | ||||| | || || ||| | |
|
|
| T |
8538703 |
cttcactaagtaacagatacaagggttatgcctacaactgtctagctgagctattgaaattcctccaaactcatattgtgttggatgtgttaggttcaag |
8538604 |
T |
|
| Q |
133 |
ccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatggtgtcgaaaggcgggctttgttccctgatata |
232 |
Q |
| |
|
||| ||||||||||| |||||||||||||||| || | | ||||||||||||||||||||||||| |||| |||| ||| |||||||| |||||| || |
|
|
| T |
8538603 |
ccaatctgaatttgttgagttattacaagatgtgcgaaaatgtggttttgataaggattggttggatcgtgttgaaaagcgcgctttgtttcctgattta |
8538504 |
T |
|
| Q |
233 |
caagtatcacaagatgccttacagaaattattggattccaagcaa |
277 |
Q |
| |
|
||| | || ||| |||| || || || ||||||||||| ||||| |
|
|
| T |
8538503 |
caattctctcaaaatgcattgcaaaagatattggattcccagcaa |
8538459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 17744130 - 17743864
Alignment:
| Q |
1 |
tgttaagcatccttctgcccgtttaaaagacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaa |
100 |
Q |
| |
|
||||||||||||||| | |||||| ||||||||| | ||||| |||||||||||| ||||||||| |||||| | |||||||||||||| || |
|
|
| T |
17744130 |
tgttaagcatccttcaattcttttaaaggacacttcattgagtaacagatacaagggttatgcctacaattgcctagctgagctattgaaattccttcaa |
17744031 |
T |
|
| Q |
101 |
acccatagtatattggaaggattggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatg |
200 |
Q |
| |
|
|| | |||| | ||||| | || || ||| || ||||||||||||| |||||||||||||||| || ||| ||| |||||||||| | |||||||||| |
|
|
| T |
17744030 |
actcgtagtgtgttggatgtgttaggttcaagcaactctgaatttgtcgagttattacaagatgtgcgcagatttccttttgataagaaatggttggatg |
17743931 |
T |
|
| Q |
201 |
gtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattgga |
267 |
Q |
| |
|
|||| |||| ||| |||||||| |||| | ||||||| || |||||||| || || ||||| ||||| |
|
|
| T |
17743930 |
gtgttgaaaagcgcgctttgtttcctggtttacaagtctctcaagatgcattgcaaaaattgttgga |
17743864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 19045450 - 19045184
Alignment:
| Q |
1 |
tgttaagcatccttctgcccgtttaaaagacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaa |
100 |
Q |
| |
|
||||||||||||||| | |||||| ||||||||| | ||||| |||||||||||| ||||||||| |||||| | |||||||||||||| || |
|
|
| T |
19045450 |
tgttaagcatccttcaattcttttaaaggacacttcattgagtaacagatacaagggttatgcctacaattgcctagctgagctattgaaattccttcaa |
19045351 |
T |
|
| Q |
101 |
acccatagtatattggaaggattggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatg |
200 |
Q |
| |
|
|| | |||| | ||||| | || || ||| || ||||||||||||| |||||||||||||||| || ||| ||| |||||||||| | |||||||||| |
|
|
| T |
19045350 |
actcgtagtgtgttggatgtgttaggttcaagcaactctgaatttgtcgagttattacaagatgtgcgcagatttccttttgataagaaatggttggatg |
19045251 |
T |
|
| Q |
201 |
gtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattgga |
267 |
Q |
| |
|
|||| |||| ||| |||||||| |||| | ||||||| || |||||||| || || ||||| ||||| |
|
|
| T |
19045250 |
gtgttgaaaagcgcgctttgtttcctggtttacaagtctctcaagatgcattgcaaaaattgttgga |
19045184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 28038020 - 28038334
Alignment:
| Q |
1 |
tgttaagcatccttctgcccgtttaaaagacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaa |
100 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||| | | ||||| |||||||| ||| ||| |||||| |||| | ||||||||||||||| || |
|
|
| T |
28038020 |
tgttaagcatccttctggtcgtttaaaggacacttaattgagtaaaagatacaagagttatgcttacaactgcctagtcgatctattgaaattcctccaa |
28038119 |
T |
|
| Q |
101 |
acccatagtatattggaaggattggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatg |
200 |
Q |
| |
|
|| |||||| | ||||| | || || ||| ||||| |||||||||| ||||| |||||||||| || ||| | | |||| ||||| |||||||| |||| |
|
|
| T |
28038120 |
acgcatagtgtgttggatgtgttaggttcaagccacactgaatttgttgagttgttacaagatgtgcgcagatgtagtttcgataaagattggtttgatg |
28038219 |
T |
|
| Q |
201 |
gtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattggattccaagcaacaggttaccaaggatgttgaagt |
300 |
Q |
| |
|
||||||||| ||| |||||||| |||||| || || | || ||| |||| || || || ||||||||||| |||| | || |||||||| ||||||| |
|
|
| T |
28038220 |
gtgtcgaaaagcgtgctttgtttcctgatttaaaattctctcaaaatgcattgcaaaagctattggattcccagcagcgtgtaaccaaggaagttgaaga |
28038319 |
T |
|
| Q |
301 |
gttgcgtttgaaaat |
315 |
Q |
| |
|
| ||||||| ||||| |
|
|
| T |
28038320 |
gatgcgtttaaaaat |
28038334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 122 - 337
Target Start/End: Complemental strand, 27458326 - 27458111
Alignment:
| Q |
122 |
ttggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatggtgtcgaaaggcgggctttgt |
221 |
Q |
| |
|
||||| ||| ||| |||| ||||||| ||||||||||||||| | |||||||| ||||||||||| |||||||||| || ||||||| || || |||| |
|
|
| T |
27458326 |
ttgggttcaagccgctctaaatttgttaagttattacaagatgtacgcagctttgcttttgataaggcttggttggatagtctcgaaagacgtgcattgt |
27458227 |
T |
|
| Q |
222 |
tccctgatatacaagtatcacaagatgccttacagaaattattggattccaagcaacaggttaccaaggatgttgaagtgttgcgtttgaaaataggcat |
321 |
Q |
| |
|
| | ||||||||||| || ||| ||| || || ||| | ||||||||||||||||| || ||||||| ||||||||||||||||| || |||| | | |
|
|
| T |
27458226 |
tttcggatatacaagtctctcaaaatgaatttcaaaaactgttggattccaagcaacaagtctccaaggaagttgaagtgttgcgttttaagatagacgt |
27458127 |
T |
|
| Q |
322 |
tttaagtcaacatgtg |
337 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
27458126 |
cttaagtcaaaatgtg |
27458111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 27430602 - 27430394
Alignment:
| Q |
1 |
tgttaagcatccttctgcccgtttaaaagacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaa |
100 |
Q |
| |
|
||||||||||||||||| | |||||| ||| ||||| | ||||| |||||||||||| |||||||||| |||||| | ||||||||||||||| || |
|
|
| T |
27430602 |
tgttaagcatccttctgttcatttaaaggacccttcattgagtaacagatacaagggttatgcctacaactgcctagctgagctattgaaattcctccaa |
27430503 |
T |
|
| Q |
101 |
acccatagtatattggaaggattggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatg |
200 |
Q |
| |
|
| |||| | | ||||| | | || ||| |||||||||||||||| |||||||||||||||| || || ||| |||||||||||| |||||||||| |
|
|
| T |
27430502 |
ccacataatgtgttggatgtggtaggttcaagccactctgaatttgttgagttattacaagatgtgcgtagatttccttttgataaggaatggttggatg |
27430403 |
T |
|
| Q |
201 |
gtgtcgaaa |
209 |
Q |
| |
|
|||| |||| |
|
|
| T |
27430402 |
gtgttgaaa |
27430394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 28163157 - 28163423
Alignment:
| Q |
1 |
tgttaagcatccttctgcccgtttaaaagacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaa |
100 |
Q |
| |
|
|||||||||||||| | | |||||| ||||||||| | ||||| |||||||||||| | ||||||| ||||| | ||||||||||||||| || |
|
|
| T |
28163157 |
tgttaagcatcctttggttcttttaaacgacacttcattgagtaacagatacaagggttatacctacaattgtctagcggagctattgaaattcctccaa |
28163256 |
T |
|
| Q |
101 |
acccatagtatattggaaggattggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatg |
200 |
Q |
| |
|
|| |||||| | ||||| | || || ||| |||||||||||||||| |||||| |||||||||| | ||| ||| ||| ||||||| |||||||||| |
|
|
| T |
28163257 |
actcatagtgtgttggatgtgttaggttcaagccactctgaatttgttgagttactacaagatgcacgcagatttccatttcataaggaatggttggatg |
28163356 |
T |
|
| Q |
201 |
gtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattgga |
267 |
Q |
| |
|
| |||||| ||| |||||||| |||| | ||||||| || |||||||| || || ||||| ||||| |
|
|
| T |
28163357 |
atatcgaaaagcgcgctttgttgcctggtttacaagtctctcaagatgcattgcaaaaattgttgga |
28163423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 29 - 221
Target Start/End: Original strand, 27920743 - 27920935
Alignment:
| Q |
29 |
gacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaaacccatagtatattggaaggattggggt |
128 |
Q |
| |
|
||||||||||| |||| |||||||||||| | |||||||| |||||| | |||||| ||||||| |||| |||||| ||||| | || || | |
|
|
| T |
27920743 |
gacacttcactgagtagcagatacaagggttattcctacaactgcctagctgagctattgcgattcctccaaactcatagtgcgttggatgtgttaggtt |
27920842 |
T |
|
| Q |
129 |
catgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatggtgtcgaaaggcgggctttgt |
221 |
Q |
| |
|
|| |||||||||||||||| || ||||||||||||| || ||| | |||||||||||| ||||||||||||||||| |||| ||| ||||||| |
|
|
| T |
27920843 |
caagccactctgaatttgttgatttattacaagatgtgcgcagatgtggttttgataaagattggttggatggtgttgaaaagcgcgctttgt |
27920935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 48 - 276
Target Start/End: Original strand, 28152207 - 28152435
Alignment:
| Q |
48 |
gatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaaacccatagtatattggaaggattggggtcatgccactctgaatttgt |
147 |
Q |
| |
|
|||||||||||| |||||||||| ||||| | |||||||||||||| |||| |||||| | ||||| | || || ||| || ||||||||||||| |
|
|
| T |
28152207 |
gatacaagggttatgcctacaacagcctagcagagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagcaactctgaatttgt |
28152306 |
T |
|
| Q |
148 |
ggagttattacaagatgcgcacagctttggttttgataaggattggttggatggtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagat |
247 |
Q |
| |
|
|||||||||||||||| || || ||| ||||||||||| |||||||||| ||| |||| ||| |||||||| |||||| ||||| | || ||| || |
|
|
| T |
28152307 |
tgagttattacaagatgtgcgtagatttccgtttgataaggagtggttggatgatgttgaaatgcgcgctttgtttcctgatttacaattctctcaaaat |
28152406 |
T |
|
| Q |
248 |
gccttacagaaattattggattccaagca |
276 |
Q |
| |
|
|| || || ||| ||||||||||| |||| |
|
|
| T |
28152407 |
gcattgcaaaaactattggattccgagca |
28152435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 27954731 - 27954892
Alignment:
| Q |
48 |
gatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaaacccatagtatattggaaggattggggtcatgccactctgaatttgt |
147 |
Q |
| |
|
|||||||||||| | |||||||| |||||| | |||||| ||||||| |||| |||||| ||||| | || || ||| |||||||||||||||| |
|
|
| T |
27954731 |
gatacaagggttattcctacaactgcctagctgagctattgcgattcctccaaactcatagtgcgttggatgtgttaggttcaagccactctgaatttgt |
27954830 |
T |
|
| Q |
148 |
ggagttattacaagatgcgcacagctttggttttgataaggattggttggatggtgtcgaaa |
209 |
Q |
| |
|
|| ||||||||||||| || ||| | |||||||||||| ||||||||||||||||| |||| |
|
|
| T |
27954831 |
tgatttattacaagatgtgcgcagatgtggttttgataaagattggttggatggtgttgaaa |
27954892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 18078829 - 18078689
Alignment:
| Q |
23 |
ttaaaagacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaaacccatagtatattggaaggat |
122 |
Q |
| |
|
||||| ||||||||| | ||||| |||||||||||| ||||||||| |||||| | ||||||||||||||| |||| |||| | | ||||| | | |
|
|
| T |
18078829 |
ttaaaggacacttcattgagtaacagatacaagggttatgcctacaattgcctagctgagctattgaaattcctccaaacgcataatgtgttggatgtgt |
18078730 |
T |
|
| Q |
123 |
tggggtcatgccactctgaatttgtggagttattacaagat |
163 |
Q |
| |
|
| || ||| |||| ||||||||||| ||||||||||||||| |
|
|
| T |
18078729 |
taggttcaagccattctgaatttgttgagttattacaagat |
18078689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 249
Target Start/End: Original strand, 11421779 - 11421980
Alignment:
| Q |
48 |
gatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaaacccatagtatattggaaggattggggtcatgccactctgaatttgt |
147 |
Q |
| |
|
|||||||||||| ||||||||| |||||| | ||||||||||||||| | ||||||||| | || || | || || ||| | ||||| |||||| |
|
|
| T |
11421779 |
gatacaagggttatgcctacaattgcctagctgagctattgaaattcctccagacccatagtgtgttagacgtgttaggttcaagaaactctacatttgt |
11421878 |
T |
|
| Q |
148 |
ggagttattacaagatgcgcacagctttggttttgataaggattggttggatggtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagat |
247 |
Q |
| |
|
|||||| ||||||||| || || ||| |||||| || || |||||||||||||| |||| ||| |||||||| |||| | ||||||| || |||||| |
|
|
| T |
11421879 |
tgagttaatacaagatgtgcgtagatttccttttgacaaagaatggttggatggtgttgaaaagcgcgctttgtttcctggtttacaagtctctcaagat |
11421978 |
T |
|
| Q |
248 |
gc |
249 |
Q |
| |
|
|| |
|
|
| T |
11421979 |
gc |
11421980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 30993893 - 30994007
Alignment:
| Q |
48 |
gatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaaacccatagtatattggaaggattggggtcatgccactctgaatttgt |
147 |
Q |
| |
|
|||| ||||||| |||||||||| |||||| | ||||||||||||||| |||| ||| || | ||||| | || || ||| |||||||||||||||| |
|
|
| T |
30993893 |
gatataagggttatgcctacaactgtctagctgatctattgaaattcctccaaacgcattgtgtgttggatgtgttaggttcaagccactctgaatttgt |
30993992 |
T |
|
| Q |
148 |
ggagttattacaaga |
162 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
30993993 |
tgagttattagaaga |
30994007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 42 - 337
Target Start/End: Complemental strand, 8692601 - 8692306
Alignment:
| Q |
42 |
gtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaaacccatagtatattggaaggattggggtcatgccactctga |
141 |
Q |
| |
|
||||| ||| ||||||||||||||||||| |||| ||| | |||||||||||||| |||| |||||| | ||||| | ||| || |||||||||||||| |
|
|
| T |
8692601 |
gtaatagattcaagggttgtgcctacaacttactggctgagctattgaaattccttgaaactcatagtgtcttggatgtattaggttcatgccactctga |
8692502 |
T |
|
| Q |
142 |
atttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatggtgtcgaaaggcgggctttgttccctgatatacaagtatca |
241 |
Q |
| |
|
|||||||||| || ||| |||||||| || |||||||||||||||||||||||||||| |||||||||| |||||| |||| |||||||||||| |||| |
|
|
| T |
8692501 |
atttgtggagctactactagatgcgcgcaactttggttttgataaggattggttggatagtgtcgaaagacgggctatgtttcctgatatacaaatatcg |
8692402 |
T |
|
| Q |
242 |
caagatgccttacagaaattattggattccaagcaacaggttaccaaggatgttgaagtgttgcgtttgaaaataggcattttaagtcaacatgtg |
337 |
Q |
| |
|
||||| ||| | || | ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| |||||||||||||||||| |
|
|
| T |
8692401 |
caagacgccatgcaaacattattggattccaagcaacaggttaccaaggaagttgaagtgttgcatttgaagatagagattttaagtcaacatgtg |
8692306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 169 - 337
Target Start/End: Original strand, 22400831 - 22400999
Alignment:
| Q |
169 |
cagctttggttttgataaggattggttggatggtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattggat |
268 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| ||||| || |||||||| | |||||| |||| || |||||||| || || ||| | |||||| |
|
|
| T |
22400831 |
cagctttggttttgataaggattggttggatagtgttgaaagacgtgctttgttttcggatataaaagtctctcaagatgcattgcaaaaactgttggat |
22400930 |
T |
|
| Q |
269 |
tccaagcaacaggttaccaaggatgttgaagtgttgcgtttgaaaataggcattttaagtcaacatgtg |
337 |
Q |
| |
|
||||||||||| || |||| || ||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
22400931 |
tccaagcaacaagtctccaaagaagttgaagtgttgcgtttgaaaatagacattttaagtcaacatgtg |
22400999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 169 - 337
Target Start/End: Original strand, 22966008 - 22966176
Alignment:
| Q |
169 |
cagctttggttttgataaggattggttggatggtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattggat |
268 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| ||||| || |||||||| | |||||| |||| || |||||||| || || ||| | |||||| |
|
|
| T |
22966008 |
cagctttggttttgataaggattggttggatagtgttgaaagacgtgctttgttttcggatataaaagtctctcaagatgcattgcaaaaactgttggat |
22966107 |
T |
|
| Q |
269 |
tccaagcaacaggttaccaaggatgttgaagtgttgcgtttgaaaataggcattttaagtcaacatgtg |
337 |
Q |
| |
|
||||||||||| || |||| || |||||||||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
22966108 |
tccaagcaacaagtctccaaagaagttgaagtgttgggtttgaaaatagacattttaagtcaacatgtg |
22966176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 170 - 337
Target Start/End: Original strand, 22792536 - 22792703
Alignment:
| Q |
170 |
agctttggttttgataaggattggttggatggtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattggatt |
269 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| ||||| || |||||||| | |||||| |||| || |||||||| || || ||| | ||||||| |
|
|
| T |
22792536 |
agctttggttttgataaggattggttggatagtgttgaaagacgtgctttgttttcggatataaaagtctctcaagatgcattgcaaaaactgttggatt |
22792635 |
T |
|
| Q |
270 |
ccaagcaacaggttaccaaggatgttgaagtgttgcgtttgaaaataggcattttaagtcaacatgtg |
337 |
Q |
| |
|
|||| ||||| || |||| || |||||||||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
22792636 |
ccaatcaacaagtctccaaagaagttgaagtgttgtgtttgaaaatagacattttaagtcaacatgtg |
22792703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 8021426 - 8021565
Alignment:
| Q |
83 |
ctattgaaattcctcaaaacccatagtatattggaaggattggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttg |
182 |
Q |
| |
|
|||||||||||||| |||| |||||| | ||||| | || || ||| ||| |||||||||| | |||||||||||||||| ||||| ||| ||||| |
|
|
| T |
8021426 |
ctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagcctctctgaatttatcgagttattacaagatgtacacagttttccttttg |
8021525 |
T |
|
| Q |
183 |
ataaggattggttggatggtgtcgaaaggcgggctttgtt |
222 |
Q |
| |
|
||||||| |||||||||| | |||||| ||| |||||||| |
|
|
| T |
8021526 |
ataaggaatggttggatgatatcgaaaagcgtgctttgtt |
8021565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0257 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0257
Description:
Target: scaffold0257; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 19608 - 19874
Alignment:
| Q |
1 |
tgttaagcatccttctgcccgtttaaaagacacttcacttagtaatggatacaagggttgtgcctacaacgtactagctaaactattgaaattcctcaaa |
100 |
Q |
| |
|
|||||| |||||||||| ||||| || ||||||||| | ||||| |||||||||||| ||||||||| |||||| | ||||||||||||||| || |
|
|
| T |
19608 |
tgttaaacatccttctgttcgtttgaaggacacttcattgagtaacagatacaagggttatgcctacaattgcctagctgagctattgaaattcctccaa |
19707 |
T |
|
| Q |
101 |
acccatagtatattggaaggattggggtcatgccactctgaatttgtggagttattacaagatgcgcacagctttggttttgataaggattggttggatg |
200 |
Q |
| |
|
|| |||||| | ||||| | || || ||| |||||||||||||||| |||||| ||||||||| || || | ||||||||||||| | |||||||||| |
|
|
| T |
19708 |
actcatagtgtgttggatgtgttaggttcaagccactctgaatttgttgagttactacaagatgtgcgcaaatgtggttttgataagaaatggttggatg |
19807 |
T |
|
| Q |
201 |
gtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttacagaaattattgga |
267 |
Q |
| |
|
||| |||| ||| |||||||| |||| | |||||| || |||||||| || || ||||| ||||| |
|
|
| T |
19808 |
atgtggaaaagcgcgctttgtttcctggttcacaagtctctcaagatgcattgcaaaaattgttgga |
19874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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