View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19729_low_1 (Length: 358)

Name: NF19729_low_1
Description: NF19729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19729_low_1
NF19729_low_1
[»] chr8 (54 HSPs)
chr8 (14-358)||(9700090-9700434)
chr8 (291-356)||(16162851-16162916)
chr8 (290-352)||(1117402-1117464)
chr8 (290-358)||(14926895-14926963)
chr8 (286-358)||(31862581-31862652)
chr8 (307-358)||(1664458-1664509)
chr8 (293-348)||(44236739-44236794)
chr8 (292-358)||(10075468-10075534)
chr8 (288-334)||(31891924-31891970)
chr8 (289-358)||(7918694-7918762)
chr8 (294-358)||(4763983-4764047)
chr8 (289-324)||(27493060-27493095)
chr8 (291-346)||(31884854-31884909)
chr8 (292-358)||(6526167-6526233)
chr8 (293-347)||(7008698-7008752)
chr8 (291-353)||(7714336-7714398)
chr8 (296-346)||(18331815-18331865)
chr8 (297-351)||(29592488-29592542)
chr8 (296-358)||(34770957-34771019)
chr8 (294-348)||(43368617-43368671)
chr8 (292-358)||(43393687-43393753)
chr8 (298-358)||(1561366-1561426)
chr8 (296-348)||(10488562-10488614)
chr8 (291-351)||(20186378-20186438)
chr8 (291-351)||(20205445-20205505)
chr8 (288-344)||(33553343-33553399)
chr8 (291-327)||(38602447-38602483)
chr8 (293-345)||(43043770-43043822)
chr8 (295-358)||(2091852-2091915)
chr8 (295-358)||(10062059-10062122)
chr8 (291-358)||(10437972-10438039)
chr8 (288-331)||(16825454-16825497)
chr8 (311-358)||(24326120-24326167)
chr8 (288-327)||(30251365-30251404)
chr8 (288-327)||(37461261-37461300)
chr8 (293-340)||(42215216-42215263)
chr8 (307-353)||(1889065-1889111)
chr8 (288-358)||(2487919-2487989)
chr8 (288-358)||(2606138-2606208)
chr8 (290-348)||(7648063-7648121)
chr8 (296-334)||(9130238-9130276)
chr8 (292-346)||(25872340-25872394)
chr8 (292-358)||(28769254-28769320)
chr8 (309-351)||(29592129-29592171)
chr8 (288-358)||(30191052-30191122)
chr8 (301-346)||(6950423-6950468)
chr8 (290-335)||(38874817-38874862)
chr8 (293-334)||(43045641-43045682)
chr8 (309-353)||(2213502-2213546)
chr8 (297-345)||(4560604-4560652)
chr8 (293-337)||(29699381-29699425)
chr8 (314-346)||(39049373-39049405)
chr8 (302-346)||(39881646-39881690)
chr8 (313-353)||(44401654-44401694)
[»] chr3 (47 HSPs)
chr3 (291-353)||(51929835-51929897)
chr3 (291-356)||(44014712-44014777)
chr3 (294-341)||(40240738-40240785)
chr3 (296-358)||(50211824-50211886)
chr3 (308-358)||(2304202-2304252)
chr3 (296-358)||(44295616-44295678)
chr3 (296-353)||(21872214-21872271)
chr3 (290-346)||(25459543-25459599)
chr3 (290-358)||(32663727-32663795)
chr3 (294-358)||(49845457-49845521)
chr3 (294-341)||(11041376-11041423)
chr3 (295-353)||(11253595-11253653)
chr3 (296-358)||(20210847-20210909)
chr3 (308-358)||(22667492-22667542)
chr3 (308-358)||(22724131-22724181)
chr3 (296-334)||(24684741-24684779)
chr3 (296-358)||(45590740-45590802)
chr3 (297-334)||(584159-584196)
chr3 (289-358)||(34958382-34958451)
chr3 (296-353)||(36189723-36189780)
chr3 (290-358)||(2100092-2100160)
chr3 (302-358)||(27795938-27795994)
chr3 (296-344)||(31512486-31512534)
chr3 (290-358)||(41057244-41057312)
chr3 (301-341)||(41644369-41644409)
chr3 (288-348)||(45541670-45541730)
chr3 (288-344)||(53891806-53891862)
chr3 (293-344)||(3622364-3622415)
chr3 (296-351)||(22055651-22055705)
chr3 (309-340)||(23326123-23326154)
chr3 (295-354)||(37138375-37138434)
chr3 (309-348)||(48807798-48807837)
chr3 (295-358)||(49605769-49605832)
chr3 (291-358)||(50015975-50016042)
chr3 (288-325)||(5407365-5407402)
chr3 (303-344)||(39769640-39769681)
chr3 (309-346)||(49465869-49465906)
chr3 (296-345)||(49916564-49916613)
chr3 (290-335)||(53762307-53762352)
chr3 (322-358)||(1810066-1810102)
chr3 (288-324)||(1820043-1820079)
chr3 (289-325)||(15304280-15304316)
chr3 (289-353)||(26320009-26320073)
chr3 (290-334)||(39980842-39980886)
chr3 (302-342)||(41848641-41848681)
chr3 (296-344)||(50760694-50760742)
chr3 (300-344)||(52440584-52440628)
[»] chr7 (49 HSPs)
chr7 (288-358)||(529451-529521)
chr7 (308-358)||(8094395-8094445)
chr7 (296-358)||(23214944-23215006)
chr7 (289-341)||(17988945-17988997)
chr7 (296-348)||(40598404-40598456)
chr7 (296-358)||(1418508-1418570)
chr7 (288-334)||(25596145-25596191)
chr7 (296-358)||(31341224-31341286)
chr7 (288-358)||(33894716-33894786)
chr7 (292-353)||(8427107-8427168)
chr7 (295-348)||(29363607-29363660)
chr7 (294-358)||(2047959-2048023)
chr7 (290-358)||(13960637-13960704)
chr7 (286-358)||(17942160-17942232)
chr7 (290-334)||(40252036-40252080)
chr7 (290-358)||(40734731-40734799)
chr7 (291-351)||(44289957-44290017)
chr7 (298-354)||(46091686-46091742)
chr7 (296-343)||(5276594-5276641)
chr7 (297-352)||(32791665-32791720)
chr7 (276-327)||(37064367-37064418)
chr7 (295-345)||(3019885-3019935)
chr7 (297-343)||(7513663-7513709)
chr7 (290-348)||(12234802-12234860)
chr7 (286-324)||(28727672-28727710)
chr7 (295-353)||(29287320-29287378)
chr7 (296-358)||(30751608-30751670)
chr7 (290-356)||(35267440-35267506)
chr7 (296-358)||(47041958-47042020)
chr7 (297-334)||(25659805-25659842)
chr7 (295-348)||(28691754-28691807)
chr7 (302-339)||(29269474-29269511)
chr7 (298-347)||(39542221-39542270)
chr7 (309-358)||(42839911-42839960)
chr7 (296-345)||(46281061-46281110)
chr7 (295-340)||(47046026-47046071)
chr7 (302-354)||(1710822-1710874)
chr7 (293-353)||(3610656-3610716)
chr7 (298-358)||(3836604-3836664)
chr7 (292-324)||(4970707-4970739)
chr7 (310-358)||(5288200-5288248)
chr7 (294-346)||(24363517-24363569)
chr7 (291-346)||(28128316-28128369)
chr7 (295-327)||(30134252-30134284)
chr7 (310-358)||(30496794-30496842)
chr7 (302-358)||(33871330-33871386)
chr7 (290-334)||(34083521-34083565)
chr7 (290-334)||(36517690-36517734)
chr7 (288-324)||(40371565-40371601)
[»] chr1 (60 HSPs)
chr1 (288-358)||(10199319-10199389)
chr1 (297-353)||(6659774-6659830)
chr1 (295-351)||(52013983-52014039)
chr1 (294-348)||(33723299-33723353)
chr1 (291-353)||(9602568-9602630)
chr1 (290-348)||(15558310-15558368)
chr1 (292-358)||(32515356-32515422)
chr1 (299-344)||(2832075-2832120)
chr1 (290-355)||(24460314-24460379)
chr1 (298-351)||(29793619-29793672)
chr1 (288-348)||(14128382-14128442)
chr1 (289-353)||(21002249-21002313)
chr1 (288-348)||(43420357-43420417)
chr1 (295-346)||(1565064-1565115)
chr1 (290-353)||(4276563-4276626)
chr1 (290-353)||(26866407-26866470)
chr1 (290-357)||(29793847-29793914)
chr1 (296-358)||(28467522-28467584)
chr1 (297-358)||(42550284-42550345)
chr1 (299-347)||(2522696-2522744)
chr1 (296-348)||(3319865-3319917)
chr1 (294-358)||(4033934-4033998)
chr1 (298-346)||(11893514-11893562)
chr1 (302-346)||(15515657-15515701)
chr1 (308-348)||(24279848-24279888)
chr1 (298-350)||(49282635-49282686)
chr1 (288-327)||(2295311-2295350)
chr1 (298-353)||(4757432-4757487)
chr1 (291-346)||(7217988-7218043)
chr1 (295-358)||(26400067-26400130)
chr1 (308-358)||(1662662-1662712)
chr1 (296-346)||(6292593-6292643)
chr1 (308-358)||(9507320-9507370)
chr1 (288-334)||(15477666-15477712)
chr1 (296-346)||(24313595-24313645)
chr1 (295-333)||(30013997-30014035)
chr1 (308-358)||(31517671-31517721)
chr1 (298-348)||(32859868-32859918)
chr1 (295-345)||(32958739-32958789)
chr1 (308-346)||(35017683-35017721)
chr1 (295-325)||(37431858-37431888)
chr1 (307-353)||(37593614-37593660)
chr1 (292-334)||(40303994-40304036)
chr1 (297-335)||(42575389-42575427)
chr1 (313-354)||(4118807-4118848)
chr1 (309-346)||(6231748-6231785)
chr1 (297-354)||(24417655-24417712)
chr1 (307-352)||(25944536-25944581)
chr1 (299-344)||(29723592-29723637)
chr1 (296-345)||(33975676-33975725)
chr1 (296-333)||(50644174-50644211)
chr1 (289-353)||(3597193-3597257)
chr1 (298-358)||(5157161-5157221)
chr1 (298-358)||(7707279-7707339)
chr1 (309-353)||(14737658-14737702)
chr1 (290-346)||(17269351-17269407)
chr1 (296-332)||(29045852-29045888)
chr1 (296-356)||(34536249-34536309)
chr1 (290-322)||(36523201-36523233)
chr1 (294-346)||(37241738-37241789)
[»] chr6 (38 HSPs)
chr6 (293-358)||(2460067-2460132)
chr6 (290-353)||(4325218-4325281)
chr6 (285-348)||(12111066-12111129)
chr6 (295-358)||(10016712-10016775)
chr6 (307-351)||(6742907-6742951)
chr6 (301-348)||(3738200-3738247)
chr6 (292-334)||(32205928-32205970)
chr6 (296-358)||(35070386-35070448)
chr6 (290-347)||(8010457-8010514)
chr6 (295-340)||(34531507-34531552)
chr6 (314-358)||(316750-316794)
chr6 (292-356)||(21959792-21959855)
chr6 (296-348)||(34403954-34404006)
chr6 (309-341)||(34429646-34429678)
chr6 (295-334)||(835179-835218)
chr6 (307-354)||(3217042-3217089)
chr6 (298-353)||(26559160-26559215)
chr6 (298-353)||(31327527-31327582)
chr6 (293-344)||(32861645-32861696)
chr6 (307-358)||(32917286-32917337)
chr6 (295-353)||(2727801-2727859)
chr6 (296-346)||(7148767-7148817)
chr6 (295-333)||(9202903-9202941)
chr6 (291-353)||(30863340-30863402)
chr6 (296-346)||(33737831-33737881)
chr6 (293-334)||(103543-103584)
chr6 (297-346)||(738461-738510)
chr6 (296-353)||(7901750-7901807)
chr6 (296-348)||(8420115-8420168)
chr6 (301-334)||(31338090-31338123)
chr6 (290-334)||(848102-848145)
chr6 (289-341)||(7485051-7485103)
chr6 (288-324)||(9109025-9109061)
chr6 (296-344)||(13908343-13908391)
chr6 (294-358)||(28005473-28005537)
chr6 (308-348)||(29052850-29052890)
chr6 (291-327)||(30536879-30536915)
chr6 (296-344)||(31776191-31776239)
[»] chr4 (49 HSPs)
chr4 (293-358)||(27123268-27123333)
chr4 (296-356)||(56186817-56186877)
chr4 (295-354)||(18512433-18512492)
chr4 (290-345)||(21953375-21953430)
chr4 (295-346)||(28615435-28615486)
chr4 (298-348)||(32420979-32421029)
chr4 (296-345)||(24193634-24193683)
chr4 (296-357)||(46187828-46187889)
chr4 (290-358)||(7367967-7368035)
chr4 (290-358)||(47399574-47399642)
chr4 (296-356)||(55870261-55870321)
chr4 (292-327)||(17822780-17822815)
chr4 (298-353)||(50746069-50746124)
chr4 (299-353)||(1017122-1017176)
chr4 (298-340)||(3637299-3637341)
chr4 (295-353)||(17975255-17975313)
chr4 (288-334)||(18815136-18815182)
chr4 (298-348)||(25896883-25896933)
chr4 (296-358)||(32421189-32421251)
chr4 (292-334)||(39691064-39691106)
chr4 (297-358)||(2977896-2977957)
chr4 (288-333)||(23319965-23320010)
chr4 (308-344)||(1075561-1075597)
chr4 (310-358)||(18628486-18628534)
chr4 (298-358)||(19429391-19429451)
chr4 (291-339)||(22662165-22662213)
chr4 (291-339)||(22666644-22666692)
chr4 (290-334)||(35571544-35571588)
chr4 (290-358)||(47146033-47146101)
chr4 (309-356)||(4691939-4691986)
chr4 (295-358)||(11264390-11264453)
chr4 (288-327)||(27043741-27043780)
chr4 (288-323)||(42403934-42403969)
chr4 (296-358)||(2811560-2811622)
chr4 (296-358)||(37575855-37575917)
chr4 (290-352)||(52333693-52333755)
chr4 (299-356)||(10365866-10365923)
chr4 (288-353)||(29126174-29126239)
chr4 (307-348)||(30338545-30338586)
chr4 (288-317)||(41512769-41512798)
chr4 (293-334)||(54426156-54426197)
chr4 (303-358)||(21469848-21469904)
chr4 (290-346)||(22772389-22772445)
chr4 (296-348)||(22796754-22796806)
chr4 (302-342)||(25487482-25487522)
chr4 (290-326)||(32769500-32769536)
chr4 (289-333)||(44638138-44638182)
chr4 (290-358)||(53315415-53315483)
chr4 (290-334)||(55414326-55414370)
[»] chr5 (59 HSPs)
chr5 (288-351)||(9174912-9174975)
chr5 (298-353)||(31723899-31723954)
chr5 (292-353)||(40335788-40335849)
chr5 (290-358)||(14599285-14599353)
chr5 (288-351)||(8651263-8651326)
chr5 (288-347)||(11153357-11153416)
chr5 (288-334)||(7705909-7705955)
chr5 (293-346)||(25705575-25705628)
chr5 (294-358)||(25720334-25720398)
chr5 (294-342)||(26004914-26004962)
chr5 (295-355)||(34198513-34198573)
chr5 (296-348)||(36796626-36796678)
chr5 (307-358)||(444011-444062)
chr5 (292-339)||(6938648-6938695)
chr5 (298-357)||(10771809-10771868)
chr5 (289-348)||(41277274-41277333)
chr5 (296-358)||(11104994-11105056)
chr5 (297-346)||(13508541-13508590)
chr5 (297-358)||(21782576-21782637)
chr5 (294-351)||(35135569-35135626)
chr5 (288-325)||(35299887-35299924)
chr5 (298-342)||(11615575-11615619)
chr5 (290-358)||(12242623-12242691)
chr5 (298-346)||(14706205-14706253)
chr5 (294-334)||(16937800-16937840)
chr5 (295-358)||(10638453-10638516)
chr5 (295-354)||(11297114-11297173)
chr5 (288-327)||(14331486-14331525)
chr5 (293-344)||(17368775-17368826)
chr5 (291-358)||(38028625-38028692)
chr5 (309-344)||(41112830-41112865)
chr5 (298-348)||(2092458-2092508)
chr5 (296-334)||(8820873-8820911)
chr5 (294-344)||(17369306-17369356)
chr5 (284-358)||(42180992-42181066)
chr5 (307-348)||(1899252-1899293)
chr5 (300-337)||(5946487-5946524)
chr5 (295-340)||(6717221-6717266)
chr5 (290-355)||(6773298-6773363)
chr5 (301-358)||(8090025-8090082)
chr5 (307-348)||(11457197-11457238)
chr5 (309-346)||(32172754-32172791)
chr5 (289-326)||(39594928-39594965)
chr5 (302-358)||(4855784-4855840)
chr5 (295-327)||(6715869-6715901)
chr5 (282-358)||(10303885-10303961)
chr5 (290-346)||(10391443-10391499)
chr5 (291-327)||(10640073-10640109)
chr5 (294-346)||(10798341-10798393)
chr5 (306-358)||(12407659-12407711)
chr5 (298-358)||(14980598-14980658)
chr5 (292-340)||(18897633-18897681)
chr5 (298-358)||(19177534-19177594)
chr5 (298-358)||(32849267-32849327)
chr5 (308-348)||(34117479-34117519)
chr5 (282-354)||(34975457-34975528)
chr5 (290-358)||(35960502-35960569)
chr5 (308-348)||(39257325-39257365)
chr5 (292-340)||(42034167-42034215)
[»] chr2 (56 HSPs)
chr2 (294-353)||(41170704-41170763)
chr2 (296-358)||(13866967-13867029)
chr2 (292-353)||(15370238-15370299)
chr2 (288-345)||(28810363-28810420)
chr2 (288-348)||(9996837-9996897)
chr2 (292-358)||(28803445-28803511)
chr2 (290-355)||(2964722-2964787)
chr2 (295-344)||(15120286-15120335)
chr2 (295-355)||(6547981-6548041)
chr2 (288-344)||(33931481-33931537)
chr2 (291-334)||(449960-450003)
chr2 (289-344)||(10563472-10563527)
chr2 (295-353)||(3078526-3078584)
chr2 (296-358)||(11513985-11514047)
chr2 (296-358)||(22878187-22878249)
chr2 (296-346)||(35329737-35329787)
chr2 (286-344)||(43259938-43259996)
chr2 (288-348)||(2790337-2790397)
chr2 (309-353)||(29430852-29430896)
chr2 (300-348)||(33981222-33981270)
chr2 (296-348)||(35713286-35713338)
chr2 (302-358)||(35809956-35810012)
chr2 (296-351)||(36677748-36677804)
chr2 (308-344)||(39567945-39567981)
chr2 (292-348)||(40759259-40759315)
chr2 (291-346)||(12313087-12313142)
chr2 (309-348)||(14302921-14302960)
chr2 (295-334)||(18179062-18179101)
chr2 (290-324)||(26202151-26202185)
chr2 (296-358)||(33197180-33197242)
chr2 (288-353)||(757543-757608)
chr2 (290-343)||(1830143-1830196)
chr2 (293-334)||(5043476-5043517)
chr2 (288-325)||(7928209-7928246)
chr2 (295-340)||(24097916-24097961)
chr2 (293-326)||(27317500-27317533)
chr2 (293-334)||(33503111-33503152)
chr2 (292-353)||(37276838-37276899)
chr2 (293-334)||(37448693-37448734)
chr2 (289-358)||(38076985-38077054)
chr2 (293-358)||(39983434-39983499)
chr2 (297-354)||(43456627-43456684)
chr2 (293-346)||(43569808-43569861)
chr2 (293-358)||(43910929-43910993)
chr2 (298-334)||(1633421-1633457)
chr2 (294-358)||(3973631-3973695)
chr2 (290-326)||(4607046-4607082)
chr2 (290-326)||(6772446-6772482)
chr2 (288-352)||(11063288-11063352)
chr2 (307-347)||(14666648-14666688)
chr2 (308-348)||(25609895-25609935)
chr2 (295-339)||(30990357-30990401)
chr2 (314-346)||(31739919-31739951)
chr2 (290-342)||(35378445-35378497)
chr2 (298-346)||(35810726-35810774)
chr2 (288-348)||(38767493-38767553)
[»] scaffold0020 (1 HSPs)
scaffold0020 (291-352)||(159887-159948)
[»] scaffold0199 (1 HSPs)
scaffold0199 (307-358)||(6899-6950)
[»] scaffold0459 (1 HSPs)
scaffold0459 (296-358)||(6635-6697)
[»] scaffold0366 (1 HSPs)
scaffold0366 (296-358)||(6633-6695)
[»] scaffold0141 (1 HSPs)
scaffold0141 (292-358)||(9693-9759)
[»] scaffold0147 (1 HSPs)
scaffold0147 (302-347)||(12641-12686)


Alignment Details
Target: chr8 (Bit Score: 341; Significance: 0; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 14 - 358
Target Start/End: Complemental strand, 9700434 - 9700090
Alignment:
Q  14 cctgtgaaaatgaagtgattgacgcaacatccccactccaattaaatcccttatcttgcgaactttttggcatacggccttctaaataatctgacaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9700434 cctgtgaaaatgaagtgattgacgcaacatccccactccaattaaatcccttatcttgcgaactttttggcatacggccttctaaataatctgacaatat 9700335  T
Q  114 gatacttggaagaccattccttttggtgatctgtctctttttaggatcataattagaaatcaggcattcaacaaaatgcttaacagctgcataagcacgt 213  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9700334 gatacttggaagaccattccttctggtgatctgtctctttttaggatcataattagaaatcaggcattcaacaaaatgcttaacagctgcataagcacgt 9700235  T
Q  214 ttccagttgcctgaaaaatataaaaataacaatgcggcgtgaaaaaatgatataattcccatcacatgcttgagtaagggcctgtttggattaacttatt 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9700234 ttccagttgcctgaaaaatataaaaataacaatgcggcgtgaaaaaatgatataattcccatcacatgcttgagtaagggcctgtttggattaacttatt 9700135  T
Q  314 tgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9700134 tgagcttatctactagcataaacacttgtgagactatttgagaga 9700090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 16162916 - 16162851
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgaga 356  Q
    |||||||||||||||  |||||||||| |||||||||||||||||||||||||||||| |||||||    
T  16162916 gggcctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgaga 16162851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 1117464 - 1117402
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactattt 352  Q
    ||||| |||||||||| ||||| |||| ||||| |||||||||||||||||||||||||||||    
T  1117464 agggcttgtttggattgacttacttgaacttatatactagcataaacacttgtgagactattt 1117402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 14926895 - 14926963
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||| |||||||||| |||||||||| ||||| |||| |||||| ||||||||||||| |||||||||    
T  14926895 agggcttgtttggattgacttatttgaacttatttactggcataagcacttgtgagactgtttgagaga 14926963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 286 - 358
Target Start/End: Complemental strand, 31862652 - 31862581
Alignment:
Q  286 agtaagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||||||||| ||| |||||||||||||| ||||||||||| | ||||||| ||||| |||||||||    
T  31862652 agtaagggcctgtttgaattgacttatttgagctt-tctactagcattatcacttgttagactgtttgagaga 31862581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 307 - 358
Target Start/End: Complemental strand, 1664509 - 1664458
Alignment:
Q  307 acttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||| ||||    
T  1664509 acttatttgagtttatctactagcataaacacttgtgagactgtttgggaga 1664458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 293 - 348
Target Start/End: Original strand, 44236739 - 44236794
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||||||||||||| |||||||||| ||||||||| |||||| |||||||||||||    
T  44236739 gcctgtttggattaccttatttgagtttatctactggcataagcacttgtgagact 44236794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 10075468 - 10075534
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||| ||||| |||||| ||| |||||    
T  10075468 ggcctgtttcgattaacttatttgagtttatctactggcataaatacttgcgagactgtttaagaga 10075534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 31891970 - 31891924
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||    
T  31891970 taagggcctgtttggattaatttatttgagtttatctactagcataa 31891924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 7918694 - 7918762
Alignment:
Q  289 aagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||||| ||| | |||||| | ||||||||||||||||||||||||||||||| |||| ||||    
T  7918694 aagggcctgtttgaattga-ttatttaaacttatctactagcataaacacttgtgagactgtttgggaga 7918762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 4764047 - 4763983
Alignment:
Q  294 cctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||||| |||||||||| |||||| |||||||||| ||| | ||||||||||| |||||    
T  4764047 cctgtttggattgacttatttgaacttatccactagcataagcacctatgagactatttaagaga 4763983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 324
Target Start/End: Complemental strand, 27493095 - 27493060
Alignment:
Q  289 aagggcctgtttggattaacttatttgagcttatct 324  Q
    ||||||||||||||||||||||||||||||||||||    
T  27493095 aagggcctgtttggattaacttatttgagcttatct 27493060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 346
Target Start/End: Original strand, 31884854 - 31884909
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    ||||||| |||||||   |||||||||||||||||||||||||| |||||||||||    
T  31884854 gggcctgcttggattgcgttatttgagcttatctactagcataagcacttgtgaga 31884909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 6526167 - 6526233
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||||||| ||||||| |||| |||||||| |||||| | ||||||||| | |||||||||    
T  6526167 ggcctgtttggattgacttattcgagcctatctactggcataagcccttgtgagattgtttgagaga 6526233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 7008752 - 7008698
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagac 347  Q
    ||||||||| ||| ||||||||||| ||||||||| |||||| ||||||||||||    
T  7008752 gcctgtttgaattgacttatttgagtttatctactggcataagcacttgtgagac 7008698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 353
Target Start/End: Complemental strand, 7714398 - 7714336
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    |||| |||||||||| |||||||||||||||| || |  ||||||||||||||||||| ||||    
T  7714398 gggcatgtttggattgacttatttgagcttatataatgtcataaacacttgtgagactgtttg 7714336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 346
Target Start/End: Complemental strand, 18331865 - 18331815
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||||||||| |||||||||| ||||||||||| ||||| |||||||||||    
T  18331865 tgtttggattgacttatttgatcttatctactaacataagcacttgtgaga 18331815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 29592488 - 29592542
Alignment:
Q  297 gtttggattaacttatttgagcttatctactagcataaacacttgtgagactatt 351  Q
    ||||||||| |||||||||||||| |||| | ||| |||||||||||||||||||    
T  29592488 gtttggattgacttatttgagcttgtctatttgcacaaacacttgtgagactatt 29592542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 34771019 - 34770957
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||| || ||||||||||| |||||| ||||||||| ||||||||| ||| |||||||||    
T  34771019 tgtttggtttgacttatttgagtttatctgctagcataagcacttgtgaaactgtttgagaga 34770957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 43368617 - 43368671
Alignment:
Q  294 cctgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||||||||||| |||||||||| ||||||||||| ||||| || ||||||||||    
T  43368617 cctgtttggattgacttatttgatcttatctactaacataagcatttgtgagact 43368671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 43393687 - 43393753
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||| |||||||| |||||||| |||||||||||| ||| |||||||| ||||||| |||| ||||    
T  43393687 ggcctatttggattgacttatttaagcttatctacttgcaaaaacacttttgagactgtttgggaga 43393753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 358
Target Start/End: Complemental strand, 1561426 - 1561366
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||| | |||||||| |||||||| | |||||||||||||||||| | |||||||||    
T  1561426 tttggattgatttatttgatcttatctaatggcataaacacttgtgagattgtttgagaga 1561366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 10488614 - 10488562
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    ||||||||||  |||||||||||||||| |||| ||||||||| |||||||||    
T  10488614 tgtttggattggcttatttgagcttatcaactaacataaacacatgtgagact 10488562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 351
Target Start/End: Original strand, 20186378 - 20186438
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatt 351  Q
    |||||| |||| ||| ||||||||||||||||||| | ||||| ||||| |||||||||||    
T  20186378 gggcctatttgcattgacttatttgagcttatctagtggcatagacactggtgagactatt 20186438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 351
Target Start/End: Original strand, 20205445 - 20205505
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatt 351  Q
    |||||| |||| ||| ||||||||||||||||||| | ||||| ||||| |||||||||||    
T  20205445 gggcctatttgcattgacttatttgagcttatctagtggcatagacactggtgagactatt 20205505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 33553399 - 33553343
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtga 344  Q
    ||||||| ||||||||||| ||||||||||||||||||  | ||||| |||||||||    
T  33553399 taagggcttgtttggattagcttatttgagcttatctatcaacataagcacttgtga 33553343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 38602483 - 38602447
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctact 327  Q
    ||||||||||||||| |||||||||||||||||||||    
T  38602483 gggcctgtttggattgacttatttgagcttatctact 38602447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 43043822 - 43043770
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataaacacttgtgag 345  Q
    ||||||||||||| |||| |||||||||||| ||| |||||| ||||||||||    
T  43043822 gcctgtttggattgacttgtttgagcttatcaactggcataagcacttgtgag 43043770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 2091915 - 2091852
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||| | |||||||| |||||| | | |||||||||||||||||| | |||||||||    
T  2091915 ctgtttggattgatttatttgatcttatccaatggcataaacacttgtgagattgtttgagaga 2091852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 10062059 - 10062122
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||||  ||||||||||||||||||||| ||| |||||||  || |||||||| ||||    
T  10062059 ctgtttggattggcttatttgagcttatctactaacatcaacacttacgaaactatttgggaga 10062122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 10438039 - 10437972
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||| |||||||||| |||||||||| |||||| | | |||||| |||||||||||| |||| |||||    
T  10438039 gggcatgtttggattgacttatttgaacttatccaatggcataatcacttgtgagacaattttagaga 10437972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 16825454 - 16825497
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagca 331  Q
    |||||||||||||||| || ||||||||| ||||||||||||||    
T  16825454 taagggcctgtttggactagcttatttgaacttatctactagca 16825497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 311 - 358
Target Start/End: Complemental strand, 24326167 - 24326120
Alignment:
Q  311 atttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||||||||| |||||| ||||||||||||| |||| ||||    
T  24326167 atttgagcttatctactggcataagcacttgtgagactgtttgggaga 24326120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 327
Target Start/End: Original strand, 30251365 - 30251404
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctact 327  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  30251365 taagggcctgtttggattggcttatttgagcttatctact 30251404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 327
Target Start/End: Complemental strand, 37461300 - 37461261
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctact 327  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  37461300 taagagcctgtttggattaacttatttgaacttatctact 37461261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 42215216 - 42215263
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataaacactt 340  Q
    |||||||| ||||||||||||||||||||| |||| |||||| |||||    
T  42215216 gcctgtttagattaacttatttgagcttatttactggcataagcactt 42215263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 353
Target Start/End: Original strand, 1889065 - 1889111
Alignment:
Q  307 acttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||||||||| ||||||||| |||||||||||| ||||||| ||||    
T  1889065 acttatttgagtttatctactggcataaacacttttgagactgtttg 1889111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 358
Target Start/End: Original strand, 2487919 - 2487989
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||| ||||||||||  |||||||||| | |||||||  ||||| ||||||||||||| |||| ||||    
T  2487919 taagggcatgtttggattggcttatttgagttcatctactgacataagcacttgtgagactgtttgggaga 2487989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 358
Target Start/End: Complemental strand, 2606208 - 2606138
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||| |||||||||| ||||||| |||||||||||||  ||||| |||| |||| ||| |||| ||||    
T  2606208 taagggcttgtttggattgacttattcgagcttatctactgacataatcactagtgaaactgtttgggaga 2606138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 348
Target Start/End: Original strand, 7648063 - 7648121
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||||| |||||| || |||||||||||||||||  || ||||||||| ||||||||||    
T  7648063 agggccggtttgggttgacttatttgagcttatccgctggcataaacatttgtgagact 7648121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 9130238 - 9130276
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataa 334  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  9130238 tgtttggattagcttatttgagcttatctactggcataa 9130276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 346
Target Start/End: Original strand, 25872340 - 25872394
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||||||||||||| ||| | |||| |||||| ||||||||| ||||||||||||    
T  25872340 ggcctgtttggattgactaacttgaacttatcaactagcatacacacttgtgaga 25872394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 28769254 - 28769320
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||| ||||  ||||||| ||  |||||||| |||||| ||||||||||| |||||||||||    
T  28769254 ggcctgttttgattgtcttattttaggctatctactggcataagcacttgtgagattatttgagaga 28769320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 351
Target Start/End: Original strand, 29592129 - 29592171
Alignment:
Q  309 ttatttgagcttatctactagcataaacacttgtgagactatt 351  Q
    ||||||||||||||||||  ||||||||||| |||||||||||    
T  29592129 ttatttgagcttatctacaggcataaacactcgtgagactatt 29592171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 358
Target Start/End: Original strand, 30191052 - 30191122
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||||||| || | |||||||||| ||||||| | |||||| ||||||| ||||| |||| ||||    
T  30191052 taagggcctgtttgcataagcttatttgagtttatctattggcataagcacttgttagactgtttgggaga 30191122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 346
Target Start/End: Complemental strand, 6950468 - 6950423
Alignment:
Q  301 ggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    ||||| ||||||||||| ||||||||| ||||||||| ||||||||    
T  6950468 ggattgacttatttgagtttatctactggcataaacatttgtgaga 6950423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 38874862 - 38874817
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaa 335  Q
    ||||| ||||| |||| |||||||||||||||| ||||||||||||    
T  38874862 agggcatgtttagattgacttatttgagcttatttactagcataaa 38874817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 334
Target Start/End: Original strand, 43045641 - 43045682
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    |||||||||||||  ||||||| |||||||||||||||||||    
T  43045641 gcctgtttggattggcttatttaagcttatctactagcataa 43045682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 353
Target Start/End: Complemental strand, 2213546 - 2213502
Alignment:
Q  309 ttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||||||  |||||||||||||||||||||||||| ||| ||||    
T  2213546 ttatttgaaattatctactagcataaacacttgtgatactgtttg 2213502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 4560652 - 4560604
Alignment:
Q  297 gtttggattaacttatttgagcttatctactagcataaacacttgtgag 345  Q
    ||||||||| ||||||||||||||||||| |  ||||| ||||||||||    
T  4560652 gtttggattgacttatttgagcttatctattgacataagcacttgtgag 4560604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 29699425 - 29699381
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataaaca 337  Q
    ||||||||||||| |||||||||||||| ||| || |||||||||    
T  29699425 gcctgtttggattgacttatttgagcttctctgctggcataaaca 29699381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 39049405 - 39049373
Alignment:
Q  314 tgagcttatctactagcataaacacttgtgaga 346  Q
    |||||||||||||||||||||||| ||||||||    
T  39049405 tgagcttatctactagcataaacatttgtgaga 39049373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 346
Target Start/End: Original strand, 39881646 - 39881690
Alignment:
Q  302 gattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||| |||||||||| |||||||| | ||||||||||||||||||    
T  39881646 gattgacttatttgaacttatctattggcataaacacttgtgaga 39881690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 44401694 - 44401654
Alignment:
Q  313 ttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||||||||||||| ||||| |||||||||||||| ||||    
T  44401694 ttgagcttatctactggcatatacacttgtgagactgtttg 44401654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 4e-20; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 291 - 353
Target Start/End: Complemental strand, 51929897 - 51929835
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||    
T  51929897 gggcctgtttggattgacttatttgagcttatctattagcataaacacttgtgaggctatttg 51929835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 44014712 - 44014777
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgaga 356  Q
    |||||||||||||||  |||||||||| |||||||||||||||||||||||||||||| |||||||    
T  44014712 gggcctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgaga 44014777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 294 - 341
Target Start/End: Original strand, 40240738 - 40240785
Alignment:
Q  294 cctgtttggattaacttatttgagcttatctactagcataaacacttg 341  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40240738 cctgtttggattaacttatttgagcttatatactagcataaacacttg 40240785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 50211886 - 50211824
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||| ||||| |||||||||    
T  50211886 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactgtttgagaga 50211824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 308 - 358
Target Start/End: Original strand, 2304202 - 2304252
Alignment:
Q  308 cttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||    
T  2304202 cttatttgaactgatctactagcataaacacttgtgaaactatttgagaga 2304252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 44295678 - 44295616
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||| |||| |||| ||||||||||||||| ||||||| ||||||||| |||||||||||||    
T  44295678 tgtttagattgacttgtttgagcttatctacaagcataagcacttgtgatactatttgagaga 44295616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 21872214 - 21872271
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||||||||||||||||||| ||||||||||  ||||| ||||||||||||| ||||    
T  21872214 tgtttggattaacttatttgatcttatctactgacataagcacttgtgagactgtttg 21872271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 290 - 346
Target Start/End: Original strand, 25459543 - 25459599
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||| ||||||||||| | ||||||||||||||| |||||||||| |||||||||||    
T  25459543 agggtctgtttggattgatttatttgagcttatcaactagcataagcacttgtgaga 25459599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 32663795 - 32663727
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||| |||||||||||  |||||||||||||||||||   || | ||||||||||||||||||||||||    
T  32663795 agggtctgtttggattggcttatttgagcttatctaccgacaaatacacttgtgagactatttgagaga 32663727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 49845457 - 49845521
Alignment:
Q  294 cctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||||| |||||||||||||||| |||||| ||||| |||| ||| |||||||| ||||    
T  49845457 cctgtttggattgacttatttgagcttatatactagtataaaaacttatgaaactatttgggaga 49845521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 341
Target Start/End: Original strand, 11041376 - 11041423
Alignment:
Q  294 cctgtttggattaacttatttgagcttatctactagcataaacacttg 341  Q
    |||||||||||| ||||| |||||||||||| ||||||||||||||||    
T  11041376 cctgtttggattgacttaattgagcttatctgctagcataaacacttg 11041423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 11253653 - 11253595
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||||| ||| ||||||||||| |||||||||||||||| |||||| |||||| ||||    
T  11253653 ctgtttgaattgacttatttgagattatctactagcataagcacttgagagactgtttg 11253595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 358
Target Start/End: Original strand, 20210847 - 20210909
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||| | ||||||||| |||||||||  ||||| ||||||||||||| |||||||||    
T  20210847 tgtttggattgatttatttgaggttatctactgacataaccacttgtgagactgtttgagaga 20210909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 358
Target Start/End: Complemental strand, 22667542 - 22667492
Alignment:
Q  308 cttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||||||||||||  ||||| ||||||||||||| |||||||||    
T  22667542 cttatttgagcttatctactgacataagcacttgtgagactgtttgagaga 22667492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 358
Target Start/End: Complemental strand, 22724181 - 22724131
Alignment:
Q  308 cttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||||||||||||  ||||| ||||||||||||| |||||||||    
T  22724181 cttatttgagcttatctactgacataagcacttgtgagactgtttgagaga 22724131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 24684741 - 24684779
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataa 334  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  24684741 tgtttggattaacttatttgagcttatctactggcataa 24684779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 45590802 - 45590740
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||| ||| |||| ||||| ||||||||||||||||| ||||||||||||| |||| ||||    
T  45590802 tgtttgaattgacttttttgaacttatctactagcataagcacttgtgagactgtttgggaga 45590740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 584196 - 584159
Alignment:
Q  297 gtttggattaacttatttgagcttatctactagcataa 334  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  584196 gtttggattgacttatttgagcttatctactagcataa 584159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 358
Target Start/End: Complemental strand, 34958451 - 34958382
Alignment:
Q  289 aagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||||||||||||||| |||||| | ||||| |  | ||||||||||||| |||||||| ||||    
T  34958451 aagggcctgtttggattaacttgtttgagatgatctattgacctaaacacttgtgacactatttgggaga 34958382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 353
Target Start/End: Complemental strand, 36189780 - 36189723
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    |||||| ||| |||||||||||||||| |||||| |||| ||||||||||||| ||||    
T  36189780 tgtttgaattgacttatttgagcttatttactagtataagcacttgtgagactgtttg 36189723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 2100092 - 2100160
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||| ||||||||||| ||||||||||||||||||   |||  |||||||||||||||| |||| ||||    
T  2100092 agggtctgtttggattgacttatttgagcttatctttcagctaaaacacttgtgagactgtttgtgaga 2100160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 358
Target Start/End: Original strand, 27795938 - 27795994
Alignment:
Q  302 gattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||| |||||||||||||||||||| |||||| ||||||||| ||| ||| |||||    
T  27795938 gattagcttatttgagcttatctactggcataagcacttgtgaaactgtttaagaga 27795994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 344
Target Start/End: Complemental strand, 31512534 - 31512486
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtga 344  Q
    |||||||||| |||| |||||||||| |||||||||| |||||||||||    
T  31512534 tgtttggattgacttgtttgagcttacctactagcatgaacacttgtga 31512486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 41057312 - 41057244
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||| |||| |||  |||||||||||||||||||  |||||| ||||||||||||| |||| ||||    
T  41057312 agggcctatttgaattggcttatttgagcttatctacatgcataagcacttgtgagactgtttgggaga 41057244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 341
Target Start/End: Original strand, 41644369 - 41644409
Alignment:
Q  301 ggattaacttatttgagcttatctactagcataaacacttg 341  Q
    |||||||||| ||||||||||||||||||||||| ||||||    
T  41644369 ggattaacttctttgagcttatctactagcataagcacttg 41644409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 45541730 - 45541670
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||| ||||||||||||| |||||||||||||||| || | | |||||||||||| |||||    
T  45541730 taagagcctgtttggattgacttatttgagcttatttaatggtataaacacttgtaagact 45541670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 53891806 - 53891862
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtga 344  Q
    ||||||||| || |||||  ||||| | |||||||||||||||||||||||||||||    
T  53891806 taagggcctattcggattggcttatatcagcttatctactagcataaacacttgtga 53891862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 3622415 - 3622364
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataaacacttgtga 344  Q
    ||||||||||||  |||||||| |||||||||||||| |||| |||||||||    
T  3622415 gcctgtttggatcgacttatttaagcttatctactagtataagcacttgtga 3622364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 351
Target Start/End: Complemental strand, 22055705 - 22055651
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatt 351  Q
    ||||||||||| |||||||||||||||||||| ||| | ||||||||| |||||||    
T  22055705 tgtttggatta-cttatttgagcttatctactggcacacacacttgtgggactatt 22055651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 340
Target Start/End: Original strand, 23326123 - 23326154
Alignment:
Q  309 ttatttgagcttatctactagcataaacactt 340  Q
    ||||||||||||||||||||||||||||||||    
T  23326123 ttatttgagcttatctactagcataaacactt 23326154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 37138434 - 37138375
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttga 354  Q
    |||||||||||  |||||| ||  |||||||||  |||||||||||||||||||||||||    
T  37138434 ctgtttggattggcttattagaatttatctactgacataaacacttgtgagactatttga 37138375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 348
Target Start/End: Complemental strand, 48807837 - 48807798
Alignment:
Q  309 ttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||||| ||||||| |||||||||||||||||||||||||    
T  48807837 ttatttaagcttatttactagcataaacacttgtgagact 48807798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 49605769 - 49605832
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||||  ||||||||| |||||| |||||||||  |||||||||| | |||||||||    
T  49605769 ctgtttggattagtttatttgagtttatcttctagcataagtacttgtgagagtgtttgagaga 49605832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 50016042 - 50015975
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||| ||||||||  ||||| | || ||||||| | |||||||||||||||||||| |||||||||    
T  50016042 gggcctctttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagaga 50015975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 325
Target Start/End: Original strand, 5407365 - 5407402
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatcta 325  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  5407365 taagggcctgtttgcattagcttatttgagcttatcta 5407402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 344
Target Start/End: Complemental strand, 39769681 - 39769640
Alignment:
Q  303 attaacttatttgagcttatctactagcataaacacttgtga 344  Q
    |||||||||||||| |||||||||| ||||||||||| ||||    
T  39769681 attaacttatttgaacttatctactcgcataaacactcgtga 39769640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 49465869 - 49465906
Alignment:
Q  309 ttatttgagcttatctactagcataaacacttgtgaga 346  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  49465869 ttatttgagcttatccattagcataaacacttgtgaga 49465906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 49916613 - 49916564
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgag 345  Q
    |||||||||| | |||||||| ||||||||||||||  ||||||||||||    
T  49916613 tgtttggattgatttatttgaacttatctactagcacgaacacttgtgag 49916564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 53762307 - 53762352
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaa 335  Q
    |||||||| |||||||   |||||||||||||||||||||||||||    
T  53762307 agggcctgcttggattggtttatttgagcttatctactagcataaa 53762352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 358
Target Start/End: Complemental strand, 1810102 - 1810066
Alignment:
Q  322 tctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  1810102 tctactaacataatcacttgtgagactatttgagaga 1810066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 324
Target Start/End: Original strand, 1820043 - 1820079
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatct 324  Q
    ||||||||||||||||||  |||||||||||||||||    
T  1820043 taagggcctgtttggattggcttatttgagcttatct 1820079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 15304280 - 15304316
Alignment:
Q  289 aagggcctgtttggattaacttatttgagcttatcta 325  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  15304280 aagggcctgtttgaattgacttatttgagcttatcta 15304316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 353
Target Start/End: Original strand, 26320009 - 26320073
Alignment:
Q  289 aagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||||||||||||||| |||||||||| ||| | ||||   |||||||||||||| ||| ||||    
T  26320009 aagggcctgtttggattgacttatttgatcttttatactgaaataaacacttgtgaaactttttg 26320073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 39980886 - 39980842
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    |||| |||||||||||  ||| |||||||||||||||||||||||    
T  39980886 agggtctgtttggattggcttgtttgagcttatctactagcataa 39980842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 342
Target Start/End: Original strand, 41848641 - 41848681
Alignment:
Q  302 gattaacttatttgagcttatctactagcataaacacttgt 342  Q
    |||| ||||||||||| |||||||||| |||||||||||||    
T  41848641 gattgacttatttgagtttatctactaacataaacacttgt 41848681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 344
Target Start/End: Complemental strand, 50760742 - 50760694
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtga 344  Q
    ||||| |||| ||||||||||||| |||||| ||||||| |||||||||    
T  50760742 tgtttagattgacttatttgagctcatctacaagcataagcacttgtga 50760694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 52440584 - 52440628
Alignment:
Q  300 tggattaacttatttgagcttatctactagcataaacacttgtga 344  Q
    ||||| ||||||||||| | ||||||||||||||| |||||||||    
T  52440584 tggataaacttatttgaacctatctactagcataagcacttgtga 52440628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 9e-18; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 288 - 358
Target Start/End: Complemental strand, 529521 - 529451
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||| ||| ||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  529521 taagggtctgattggattgacttatttgagcttatctactggcataaacacttgtgaggctatttgggaga 529451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 308 - 358
Target Start/End: Complemental strand, 8094445 - 8094395
Alignment:
Q  308 cttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8094445 cttatttgagcttatctactagcataagcacttgtgagactatttgagaga 8094395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 23215006 - 23214944
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| ||||||| |||||||||    
T  23215006 tgtttggattgacttatttgaccttatctactagcataaacacttatgagactgtttgagaga 23214944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 17988945 - 17988997
Alignment:
Q  289 aagggcctgtttggattaacttatttgagcttatctactagcataaacacttg 341  Q
    |||||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  17988945 aagggcttgtttggattaacttatttgagcttatctactcgcataatcacttg 17988997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 40598404 - 40598456
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  40598404 tgtttggattgacttatttgagcttatctactagcatgaacacttgcgagact 40598456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 1418570 - 1418508
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||| ||||||||||||||||||||| |||||| ||||| |||| || |||| ||||    
T  1418570 tgtttggattgacttatttgagcttatctactggcataagcacttatgaggctgtttgtgaga 1418508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 25596191 - 25596145
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    |||||||||||||||| | |||||||||||||||||||| |||||||    
T  25596191 taagggcctgtttggactgacttatttgagcttatctaccagcataa 25596145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 31341286 - 31341224
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||| |||||||||||||| |||||| |||||||||||| | ||||| |||| ||||    
T  31341286 tgtttggattgacttatttgagcttttctacttgcataaacacttttaagactgtttgggaga 31341224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 358
Target Start/End: Complemental strand, 33894786 - 33894716
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||| ||||||||||| |||||||||||||||| | |  ||||| ||||||||||||| |||| ||||    
T  33894786 taagggcatgtttggattagcttatttgagcttatcaaatgacataagcacttgtgagactgtttgtgaga 33894716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 8427168 - 8427107
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||| |||||||| | |||||||||||||||||||| |||||  |||||||||||| ||||    
T  8427168 ggcctatttggattgatttatttgagcttatctactaacataagtacttgtgagactgtttg 8427107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 29363660 - 29363607
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||||||||||  ||||||||| ||||||||||| ||||| |||||||||||||    
T  29363660 ctgtttggattggcttatttgaacttatctactaacataagcacttgtgagact 29363607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 2047959 - 2048023
Alignment:
Q  294 cctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||| | |||||||||| |  ||||||||||||||||| |||||| ||| |||||||||    
T  2047959 cctgtttggaatgacttatttgaaccaatctactagcataaacatttgtgatactctttgagaga 2048023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 13960637 - 13960704
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||| || ||||| ||||||||||||||||| | | |||||| |||||| ||||||||||||||||    
T  13960637 agggcctattcggattgacttatttgagcttatcca-ttgcataagcacttgcgagactatttgagaga 13960704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 358
Target Start/End: Complemental strand, 17942232 - 17942160
Alignment:
Q  286 agtaagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||| |||||||||||| | |||| ||||||||||||||||   |||||||| ||||||||| | |||||||    
T  17942232 agtaatggcctgtttggaatgacttgtttgagcttatctactgcaataaacacctgtgagactgtctgagaga 17942160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 40252036 - 40252080
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    |||||||||||| |||  |||||||||||||||||||||||||||    
T  40252036 agggcctgtttgaattggcttatttgagcttatctactagcataa 40252080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 40734731 - 40734799
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||||| ||  ||||| ||||||||||||||||  ||||| |||||||||| | |||||||||    
T  40734731 agggcctgtttgcatcgacttacttgagcttatctactaatataaatacttgtgagattgtttgagaga 40734799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 351
Target Start/End: Original strand, 44289957 - 44290017
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatt 351  Q
    |||||| |||| ||| ||||||||||||||||||| | ||||| ||||| |||||||||||    
T  44289957 gggcctatttgcattgacttatttgagcttatctagtggcatagacactggtgagactatt 44290017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 354
Target Start/End: Complemental strand, 46091742 - 46091686
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagactatttga 354  Q
    |||||||||||||||||||||| ||||| ||| |||| || ||||||||||| ||||    
T  46091742 tttggattaacttatttgagctcatctaatagtataagcatttgtgagactaattga 46091686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 343
Target Start/End: Complemental strand, 5276641 - 5276594
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtg 343  Q
    |||||||||| |||||  ||||||||||||||| ||||||||||||||    
T  5276641 tgtttggattgacttagatgagcttatctactaacataaacacttgtg 5276594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 352
Target Start/End: Original strand, 32791665 - 32791720
Alignment:
Q  297 gtttggattaacttatttgagcttatctactagcataaacacttgtgagactattt 352  Q
    |||||||||  |||||  |||||||||||||||||||| |||| ||||||||||||    
T  32791665 gtttggattggcttatcagagcttatctactagcataagcactagtgagactattt 32791720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 327
Target Start/End: Original strand, 37064367 - 37064418
Alignment:
Q  276 cacatgcttgagtaagggcctgtttggattaacttatttgagcttatctact 327  Q
    ||||||||| | |||||| ||||||||||| |||||||||| ||||||||||    
T  37064367 cacatgcttaattaagggtctgtttggattgacttatttgatcttatctact 37064418  T

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Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 3019935 - 3019885
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgag 345  Q
    |||||| |||| ||||||||||||||||||||||| ||||  |||||||||    
T  3019935 ctgttttgattgacttatttgagcttatctactagtataagtacttgtgag 3019885  T

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Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 343
Target Start/End: Complemental strand, 7513709 - 7513663
Alignment:
Q  297 gtttggattaacttatttgagcttatctactagcataaacacttgtg 343  Q
    ||||| ||| ||||||||||||||||||||| |||||| ||||||||    
T  7513709 gtttgaattgacttatttgagcttatctactggcataagcacttgtg 7513663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 348
Target Start/End: Original strand, 12234802 - 12234860
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    ||||||| |||||||| ||||| ||||||||||||||| |||| | ||| |||||||||    
T  12234802 agggcctatttggattgacttagttgagcttatctactggcattagcacgtgtgagact 12234860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Original strand, 28727672 - 28727710
Alignment:
Q  286 agtaagggcctgtttggattaacttatttgagcttatct 324  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  28727672 agtaagagcctatttggattaacttatttgagcttatct 28727710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 29287378 - 29287320
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||||||||| ||| ||||||| ||||||| ||  ||||||||| |||||||||||||    
T  29287378 ctgtttggattgactaatttgagtttatctagtaatataaacactcgtgagactatttg 29287320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 30751670 - 30751608
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||||||||||| | ||||||||||  ||||| |||||||| |||| |||| ||||    
T  30751670 tgtttggattaacttatttaaacttatctactgacataagcacttgtgcgactgtttgggaga 30751608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 356
Target Start/End: Complemental strand, 35267506 - 35267440
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgaga 356  Q
    ||||||| |||| ||| |||||||||||||||||||||| ||||   |||| |||| ||||||||||    
T  35267506 agggcctatttgaattgacttatttgagcttatctactaccatatgaacttatgagcctatttgaga 35267440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 358
Target Start/End: Original strand, 47041958 - 47042020
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||| |||||||||||| |||||| |  ||| ||||||||||||||| |||| ||||    
T  47041958 tgtttggattgacttatttgagcatatctattgacattaacacttgtgagactttttgtgaga 47042020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 25659805 - 25659842
Alignment:
Q  297 gtttggattaacttatttgagcttatctactagcataa 334  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  25659805 gtttggattaacttatttgagattatctactaacataa 25659842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 28691754 - 28691807
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    ||||||||||| ||||||||||| |||||| ||| ||||| || ||||||||||    
T  28691754 ctgtttggattgacttatttgagtttatctgctaacataagcatttgtgagact 28691807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 29269511 - 29269474
Alignment:
Q  302 gattaacttatttgagcttatctactagcataaacact 339  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  29269511 gattaacttatttgagcttatgtactaacataaacact 29269474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 347
Target Start/End: Original strand, 39542221 - 39542270
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagac 347  Q
    ||||| || ||||||||||| |||||||||||||||| |||||| |||||    
T  39542221 tttgggttgacttatttgagtttatctactagcataagcacttgcgagac 39542270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 42839911 - 42839960
Alignment:
Q  309 ttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||| |||| ||||||||||| ||||| |||||||||||| ||||    
T  42839911 ttatttgagattatgtactagcataagcacttttgagactatttgggaga 42839960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 46281061 - 46281110
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgag 345  Q
    ||||||||||  ||||||||| ||||||||||| ||||||||||| ||||    
T  46281061 tgtttggattggcttatttgaacttatctactaacataaacacttttgag 46281110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 340
Target Start/End: Original strand, 47046026 - 47046071
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacactt 340  Q
    ||||||||||| ||||||||| |||||||||||  |||||||||||    
T  47046026 ctgtttggattgacttatttgtgcttatctactgacataaacactt 47046071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 354
Target Start/End: Complemental strand, 1710874 - 1710822
Alignment:
Q  302 gattaacttatttgagcttatctactagcataaacacttgtgagactatttga 354  Q
    ||||| ||||||||||||||||||||| ||||| | ||||||| ||| |||||    
T  1710874 gattagcttatttgagcttatctactaacataatcccttgtgacactgtttga 1710822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 353
Target Start/End: Original strand, 3610656 - 3610716
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||||||| |||  |||||||||||||||||||| || ||| ||||||||| ||| ||||    
T  3610656 gcctgtttgaattggcttatttgagcttatctactggcctaaccacttgtgatactttttg 3610716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 358
Target Start/End: Original strand, 3836604 - 3836664
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||  |||||||||||||||||||| || ||| ||||||||| ||| |||| ||||    
T  3836604 tttggattgccttatttgagcttatctactggcttaagcacttgtgaaactgtttgggaga 3836664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 4970707 - 4970739
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatct 324  Q
    |||||||||||||| ||||||||||||||||||    
T  4970707 ggcctgtttggattgacttatttgagcttatct 4970739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 358
Target Start/End: Complemental strand, 5288248 - 5288200
Alignment:
Q  310 tatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||| |||||||||||||| ||||| ||||||| |||| ||||    
T  5288248 tatttgagctaatctactagcataagcacttatgagactgtttgggaga 5288200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 24363517 - 24363569
Alignment:
Q  294 cctgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    ||||||||||||   ||||||||| |||||||||||||||| ||||| |||||    
T  24363517 cctgtttggattgttttatttgagtttatctactagcataagcacttatgaga 24363569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 346
Target Start/End: Original strand, 28128316 - 28128369
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||||||||||||||| ||||||||||  | ||||| ||||||| |||||||||||    
T  28128316 gggcctgtttggattagcttatttgag--tgtctacgagcataagcacttgtgaga 28128369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 327
Target Start/End: Complemental strand, 30134284 - 30134252
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctact 327  Q
    ||||||| |||||||||||||||||||||||||    
T  30134284 ctgtttgaattaacttatttgagcttatctact 30134252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 358
Target Start/End: Complemental strand, 30496842 - 30496794
Alignment:
Q  310 tatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||| |||||||||||||||| | |||| ||||||| ||||||||    
T  30496842 tatttgagtttatctactagcataagcccttgcgagactacttgagaga 30496794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 358
Target Start/End: Complemental strand, 33871386 - 33871330
Alignment:
Q  302 gattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||| |||| ||||||||||||||||  |||||||||||| || |||||||| ||||    
T  33871386 gattgacttttttgagcttatctacttacataaacacttgcgaaactatttgggaga 33871330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 34083521 - 34083565
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    ||||| |||||||||| ||||||||||||| ||||||| ||||||    
T  34083521 agggcatgtttggattgacttatttgagctcatctacttgcataa 34083565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 36517734 - 36517690
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    |||||||||||||||| | ||||||||||||| ||||| ||||||    
T  36517734 agggcctgtttggattcatttatttgagcttagctactggcataa 36517690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 324
Target Start/End: Original strand, 40371565 - 40371601
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatct 324  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  40371565 taagggcatgtttggattgacttatttgagcttatct 40371601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 9e-18; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 288 - 358
Target Start/End: Original strand, 10199319 - 10199389
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||| ||||||||| |||||||| ||||    
T  10199319 taagggcctggttggattgacttatttgagcttatctactaacataagcacttgtgacactatttgggaga 10199389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 6659830 - 6659774
Alignment:
Q  297 gtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  6659830 gtttggattgacttattttagcttatctactagcataagcacttgtgagactatttg 6659774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 295 - 351
Target Start/End: Complemental strand, 52014039 - 52013983
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatt 351  Q
    ||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||    
T  52014039 ctgtttggattaacttatttgagcttatctattggcataaacacgtgtgagactatt 52013983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 33723299 - 33723353
Alignment:
Q  294 cctgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||||||||||| |||||||||| ||||||||||| |||||||||||||||||||    
T  33723299 cctgtttggattgacttatttgaacttatctactaccataaacacttgtgagact 33723353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 353
Target Start/End: Original strand, 9602568 - 9602630
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    |||||| |||||||| |||||| ||||||||||||||| | ||| ||||||||||||||||||    
T  9602568 gggcctatttggattgacttatctgagcttatctactaacttaagcacttgtgagactatttg 9602630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 348
Target Start/End: Complemental strand, 15558368 - 15558310
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||||||||||||||| | ||||||||||||||| ||| || |||||||||||||||||    
T  15558368 agggcctgtttggattgagttatttgagcttatcgactggcttaaacacttgtgagact 15558310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 32515356 - 32515422
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||||||| | |||||||| |||||||||| ||||| ||||||||||||| |||| ||||    
T  32515356 ggcctgtttggattagcatatttgagtttatctactaacataagcacttgtgagactgtttgggaga 32515422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 2832120 - 2832075
Alignment:
Q  299 ttggattaacttatttgagcttatctactagcataaacacttgtga 344  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||    
T  2832120 ttggattagcttatttgagcttatctactagcataagcacttgtga 2832075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 355
Target Start/End: Original strand, 24460314 - 24460379
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgag 355  Q
    |||||||||||||||| |||||||||| ||||||||||  ||| | ||||||||||||| ||||||    
T  24460314 agggcctgtttggattgacttatttgaacttatctactgacatgagcacttgtgagactgtttgag 24460379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 351
Target Start/End: Original strand, 29793619 - 29793672
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagactatt 351  Q
    |||| ||| |||||||||||||||||||||  ||||||||||||||||||||||    
T  29793619 tttgtattgacttatttgagcttatctactgacataaacacttgtgagactatt 29793672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 14128382 - 14128442
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    ||||||| |||||||||||  |||| ||| |||||||||||||||||||| ||||||||||    
T  14128382 taagggcttgtttggattagattatgtgaacttatctactagcataaacatttgtgagact 14128442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 353
Target Start/End: Complemental strand, 21002313 - 21002249
Alignment:
Q  289 aagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    |||||| ||||||||||  |||||||||||||||||||| ||||||  |||||||||||| ||||    
T  21002313 aagggcttgtttggattggcttatttgagcttatctacttgcataagaacttgtgagactgtttg 21002249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 43420417 - 43420357
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||||| ||||| |||||| |||||||||||||||||||   |||||||||||||||||||    
T  43420417 taagggtctgttaggattagcttatttgagcttatctacagacataaacacttgtgagact 43420357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 1565064 - 1565115
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||||||||||||||| |||||| ||||||||||||| || |||||||||||    
T  1565064 ctgtttggattaacttttttgagattatctactagcacaagcacttgtgaga 1565115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 353
Target Start/End: Original strand, 4276563 - 4276626
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||| |||||||||| |||||||||||||||||| || |||||| || |||| ||||||||||    
T  4276563 agggcatgtttggatttacttatttgagcttatcttctggcataagcatttgttagactatttg 4276626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 353
Target Start/End: Complemental strand, 26866470 - 26866407
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    |||| ||||||||||| |||||||| ||||||||||||| || ||| |||| ||||||||||||    
T  26866470 agggtctgtttggattgacttatttcagcttatctactaacacaaatacttctgagactatttg 26866407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 357
Target Start/End: Complemental strand, 29793914 - 29793847
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagag 357  Q
    |||| ||||||| ||| ||||||||||  |||| ||| ||||||| ||||||||||||||||||||||    
T  29793914 agggtctgtttgaattgacttatttgaatttatttaccagcataagcacttgtgagactatttgagag 29793847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 28467584 - 28467522
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||| ||||||||||| |||| ||||||||| | ||||| |||||||||||| ||||    
T  28467584 tgtttggattgacttatttgagtttatttactagcattagcacttatgagactatttgggaga 28467522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 358
Target Start/End: Complemental strand, 42550345 - 42550284
Alignment:
Q  297 gtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||| ||||| ||||| |||||||| |||||||||||||||||  || |||||||||    
T  42550345 gtttggattgacttagttgaggttatctaccagcataaacacttgtgaagctctttgagaga 42550284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 347
Target Start/End: Complemental strand, 2522744 - 2522696
Alignment:
Q  299 ttggattaacttatttgagcttatctactagcataaacacttgtgagac 347  Q
    ||||||| ||||||||||| ||||||||| |||||||||||||| ||||    
T  2522744 ttggattgacttatttgagtttatctactggcataaacacttgtaagac 2522696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 3319865 - 3319917
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||||||||| ||||||||||||||||||||||||| || || || |||||||    
T  3319865 tgtttggattgacttatttgagcttatctactagcaaaagcaattatgagact 3319917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 4033934 - 4033998
Alignment:
Q  294 cctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||| ||| ||| |||||| ||| |||||| |||||||||||||||||| | |||||||||    
T  4033934 cctgtttgcattgactcatttgaacttgtctactggcataaacacttgtgagattgtttgagaga 4033998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 346
Target Start/End: Original strand, 11893514 - 11893562
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||||||| |||||||||| |||||||||||||| ||| ||||||||||    
T  11893514 tttggattgacttatttgaacttatctactagcacaaatacttgtgaga 11893562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 346
Target Start/End: Complemental strand, 15515701 - 15515657
Alignment:
Q  302 gattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||| ||||||||||||||||||||| |||||||||| |||||||    
T  15515701 gattgacttatttgagcttatctactggcataaacacgtgtgaga 15515657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 24279888 - 24279848
Alignment:
Q  308 cttatttgagcttatctactagcataaacacttgtgagact 348  Q
    ||||||||| ||||| |||||||||||||||||||||||||    
T  24279888 cttatttgaacttatttactagcataaacacttgtgagact 24279848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 49282635 - 49282686
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagactat 350  Q
    ||||||||| |||||||||| || ||||||| |||||||||||||||||||||    
T  49282635 tttggattagcttatttgag-ttgtctactaacataaacacttgtgagactat 49282686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 327
Target Start/End: Complemental strand, 2295350 - 2295311
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctact 327  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  2295350 taagggcctgtttggattggcttatttgagcttatctact 2295311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 353
Target Start/End: Complemental strand, 4757487 - 4757432
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||| || ||||||||||||||||||| |  |||||||||||||||||| |||||    
T  4757487 tttggtttgacttatttgagcttatctattgacataaacacttgtgagaccatttg 4757432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 346
Target Start/End: Original strand, 7217988 - 7218043
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||| |||||||||| |||||||| |||||||||||  |||||||||||| |||||    
T  7217988 gggcatgtttggattgacttatttaagcttatctaccggcataaacacttctgaga 7218043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 26400130 - 26400067
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||||  |||||||||| |||| |||||||||||  |||||||||| | |||||||||    
T  26400130 ctgtttggatttgcttatttgagattatatactagcataataacttgtgagattgtttgagaga 26400067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 358
Target Start/End: Complemental strand, 1662712 - 1662662
Alignment:
Q  308 cttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||||||||||||||||||||  || || ||||||||||| ||||    
T  1662712 cttatttgagcttatctactagcataagtacatgcgagactatttgcgaga 1662662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 346
Target Start/End: Complemental strand, 6292643 - 6292593
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||||||||| |||||||||||||||||||||  ||||| ||||| |||||    
T  6292643 tgtttggattgacttatttgagcttatctactgacataagcacttttgaga 6292593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 358
Target Start/End: Complemental strand, 9507370 - 9507320
Alignment:
Q  308 cttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||||||||||||||||||  || |||||||||| |||| ||||    
T  9507370 cttatttgagcttatctactagcataggcatttgtgagactgtttgggaga 9507320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 15477712 - 15477666
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    ||||||||||||||||||  |||||| ||||||||||||| ||||||    
T  15477712 taagggcctgtttggattggcttattagagcttatctacttgcataa 15477666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 24313595 - 24313645
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||||||||| |  |||||||| ||||||||||||| ||||||||||||||    
T  24313595 tgtttggatttatctatttgagtttatctactagcacaaacacttgtgaga 24313645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 333
Target Start/End: Original strand, 30013997 - 30014035
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcata 333  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  30013997 ctgtttggattgacttatttgagtttatctactagcata 30014035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 358
Target Start/End: Original strand, 31517671 - 31517721
Alignment:
Q  308 cttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||||||| |||| |||||| ||||||||||||| |||| ||||    
T  31517671 cttatttgagcttatttactggcataagcacttgtgagactgtttgggaga 31517721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 348
Target Start/End: Original strand, 32859868 - 32859918
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||| ||| ||||| ||||||||||||||||||||||  ||||||||||||    
T  32859868 tttgaattgacttacttgagcttatctactagcataagtacttgtgagact 32859918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 32958789 - 32958739
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgag 345  Q
    |||||| |||| |||||||||||||||||||||  ||||| ||||||||||    
T  32958789 ctgtttagattgacttatttgagcttatctactgtcataagcacttgtgag 32958739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 346
Target Start/End: Complemental strand, 35017721 - 35017683
Alignment:
Q  308 cttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  35017721 cttatttgagcttatctattggcataaacacttgtgaga 35017683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 325
Target Start/End: Complemental strand, 37431888 - 37431858
Alignment:
Q  295 ctgtttggattaacttatttgagcttatcta 325  Q
    |||||||||||||||||||||||||||||||    
T  37431888 ctgtttggattaacttatttgagcttatcta 37431858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 353
Target Start/End: Original strand, 37593614 - 37593660
Alignment:
Q  307 acttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    |||||||||||||||| |||| |||||||||||||| ||||| ||||    
T  37593614 acttatttgagcttatatactggcataaacacttgttagactgtttg 37593660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 334
Target Start/End: Original strand, 40303994 - 40304036
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    ||||||||||||||||||||||| || ||||||||| ||||||    
T  40303994 ggcctgtttggattaacttatttcagattatctactggcataa 40304036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 42575389 - 42575427
Alignment:
Q  297 gtttggattaacttatttgagcttatctactagcataaa 335  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  42575389 gtttggattgccttatttgagcttatctactagcataaa 42575427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 4118807 - 4118848
Alignment:
Q  313 ttgagcttatctactagcataaacacttgtgagactatttga 354  Q
    ||||||||||||||||| |||||||||| ||||||| |||||    
T  4118807 ttgagcttatctactagtataaacacttttgagactctttga 4118848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 6231748 - 6231785
Alignment:
Q  309 ttatttgagcttatctactagcataaacacttgtgaga 346  Q
    ||||||||| ||||||||||||||||||| ||||||||    
T  6231748 ttatttgaggttatctactagcataaacatttgtgaga 6231785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 354
Target Start/End: Original strand, 24417655 - 24417712
Alignment:
Q  297 gtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttga 354  Q
    ||||||||| ||||||||||| ||||||| ||  ||||  ||||||||||||||||||    
T  24417655 gtttggattgacttatttgagtttatctattaatataagtacttgtgagactatttga 24417712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 25944581 - 25944536
Alignment:
Q  307 acttatttgagcttatctactagcataaacacttgtgagactattt 352  Q
    ||||||||| |||||| ||||  |||||||||||||||||||||||    
T  25944581 acttatttgcgcttatttactgacataaacacttgtgagactattt 25944536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 29723637 - 29723592
Alignment:
Q  299 ttggattaacttatttgagcttatctactagcataaacacttgtga 344  Q
    ||||||| ||| |||||||||||| ||||||||||| |||||||||    
T  29723637 ttggattgactaatttgagcttatttactagcataagcacttgtga 29723592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 33975725 - 33975676
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgag 345  Q
    ||||||| || |||||||||||||||||||||| || || ||||||||||    
T  33975725 tgtttgggttcacttatttgagcttatctactaacacaagcacttgtgag 33975676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 50644174 - 50644211
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcata 333  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  50644174 tgtttggattgacttatttgagcttatctactaacata 50644211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 353
Target Start/End: Original strand, 3597193 - 3597257
Alignment:
Q  289 aagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    |||| |||||||||||| ||||||||||| ||||||| |   |||| ||||||||||||| ||||    
T  3597193 aaggacctgtttggattgacttatttgaggttatctaatgatataaccacttgtgagactgtttg 3597257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 358
Target Start/End: Complemental strand, 5157221 - 5157161
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||| |||||||||| |||||||||   ||||||||||||||| ||| |||| ||||    
T  5157221 tttggattgacttatttgaacttatctacggacataaacacttgtgaaactgtttgggaga 5157161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 358
Target Start/End: Complemental strand, 7707339 - 7707279
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||| ||| ||||||||||  ||||||||||| ||||| |||||| ||| |||||||||||    
T  7707339 tttgcattgacttatttgaatttatctactagtataaatacttgtaagattatttgagaga 7707279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 353
Target Start/End: Original strand, 14737658 - 14737702
Alignment:
Q  309 ttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    |||||||||||||| |||||| |||| ||||||||||||| ||||    
T  14737658 ttatttgagcttatttactagaataagcacttgtgagactgtttg 14737702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 17269407 - 17269351
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||||||||||||||| |||||||||| ||||||| ||    |||||||||||||||    
T  17269407 agggcctgtttggattgacttatttgaacttatcttcttatttaaacacttgtgaga 17269351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 332
Target Start/End: Original strand, 29045852 - 29045888
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcat 332  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  29045852 tgtttggattgacttatttgagtttatctactagcat 29045888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 356
Target Start/End: Complemental strand, 34536309 - 34536249
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgaga 356  Q
    |||||||| | |||||||||| | |||||| |  ||||||||||||||||||| |||||||    
T  34536309 tgtttggaatgacttatttgaacgtatctattgacataaacacttgtgagactgtttgaga 34536249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 322
Target Start/End: Original strand, 36523201 - 36523233
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttat 322  Q
    ||||||||||||||||||||||||| |||||||    
T  36523201 agggcctgtttggattaacttatttaagcttat 36523233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 37241738 - 37241789
Alignment:
Q  294 cctgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||||||||||| |||||||| |||||||||||| |||||| |||||| ||||    
T  37241738 cctgtttggattgacttatttaagcttatctact-gcataagcacttgcgaga 37241789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 2460067 - 2460132
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||||||||||||||||||||||  ||||||||||  |||||||||||| |||||||||    
T  2460067 gcctgtttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagaga 2460132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 290 - 353
Target Start/End: Original strand, 4325218 - 4325281
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    |||||||||||||||| ||| |||| || |||||||||| ||||||||||||||||||||||||    
T  4325218 agggcctgtttggattgactaattttagtttatctactaacataaacacttgtgagactatttg 4325281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 285 - 348
Target Start/End: Complemental strand, 12111129 - 12111066
Alignment:
Q  285 gagtaagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    ||||| |||||| |||||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  12111129 gagtatgggcctatttggattgacttatttgagcttatctactagcataagcacttgcgagact 12111066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 10016775 - 10016712
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||||   ||||||||||||||||||  |||||||||||||||||||||||| |||||    
T  10016775 ctgtttggattggtttatttgagcttatctacaggcataaacacttgtgagactatttcagaga 10016712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 6742951 - 6742907
Alignment:
Q  307 acttatttgagcttatctactagcataaacacttgtgagactatt 351  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||    
T  6742951 acttatttgagcttacctactagcataatcacttgtgagactatt 6742907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 3738247 - 3738200
Alignment:
Q  301 ggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    ||||| ||||||||||| |||||||||||||||| |||||||||||||    
T  3738247 ggattgacttatttgagtttatctactagcataagcacttgtgagact 3738200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 334
Target Start/End: Original strand, 32205928 - 32205970
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  32205928 ggcctgtttggattgacttatttgaccttatctactagcataa 32205970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 358
Target Start/End: Original strand, 35070386 - 35070448
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||  ||||||||||||||||||||| ||||| |||||||| |||| |||| ||||    
T  35070386 tgtttggattttcttatttgagcttatctactaacataagcacttgtgggactgtttgggaga 35070448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 8010514 - 8010457
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagac 347  Q
    |||| ||||||||||| |||||| |||||||||||| | ||||||||| |||||||||    
T  8010514 agggtctgtttggattgacttatgtgagcttatctattggcataaacatttgtgagac 8010457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 340
Target Start/End: Complemental strand, 34531552 - 34531507
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacactt 340  Q
    ||||||||||| ||| |||||||||||||| |||||||||||||||    
T  34531552 ctgtttggattgactgatttgagcttatctcctagcataaacactt 34531507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 358
Target Start/End: Original strand, 316750 - 316794
Alignment:
Q  314 tgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||||||||||||||||||||||| || ||| ||||||    
T  316750 tgagcttatctactagcataaacacttgtgacacgattcgagaga 316794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 356
Target Start/End: Complemental strand, 21959855 - 21959792
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgaga 356  Q
    ||||||||||||||||||||||||| ||||| |||| || ||| ||||| ||||||| |||||||    
T  21959855 ggcctgtttggattaacttatttgaacttatatacttgc-taagcacttctgagactgtttgaga 21959792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 34404006 - 34403954
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    ||||||||||||||||||| |||| ||  |||||||||||||||||| |||||    
T  34404006 tgtttggattaacttatttcagctaataaactagcataaacacttgttagact 34403954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 34429646 - 34429678
Alignment:
Q  309 ttatttgagcttatctactagcataaacacttg 341  Q
    |||||||||||||||||||||||||||||||||    
T  34429646 ttatttgagcttatctactagcataaacacttg 34429678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 835179 - 835218
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataa 334  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  835179 ctgtttggattgccttatttgagcttatctactagcataa 835218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 3217042 - 3217089
Alignment:
Q  307 acttatttgagcttatctactagcataaacacttgtgagactatttga 354  Q
    ||||||||||||||||||||| ||||||||| ||| || |||||||||    
T  3217042 acttatttgagcttatctacttgcataaacatttgcgaaactatttga 3217089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 353
Target Start/End: Original strand, 26559160 - 26559215
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    |||||||||||||||||||| ||| ||||| |||||| || |||||||||| ||||    
T  26559160 tttggattaacttatttgagtttacctactggcataagcatttgtgagactgtttg 26559215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 353
Target Start/End: Original strand, 31327527 - 31327582
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    |||| ||| |||||||| ||||||| ||||||| ||||||||||||| ||||||||    
T  31327527 tttgaattgacttatttaagcttatttactagcctaaacacttgtgaaactatttg 31327582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 32861696 - 32861645
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataaacacttgtga 344  Q
    |||| ||||||||  |||||||||||||||||||||| |||| |||||||||    
T  32861696 gcctttttggatttgcttatttgagcttatctactagaataagcacttgtga 32861645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 358
Target Start/End: Complemental strand, 32917337 - 32917286
Alignment:
Q  307 acttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||| ||||||| ||||||| |||||||||||||||||| |||| ||||    
T  32917337 acttattagagcttacctactagaataaacacttgtgagactgtttgggaga 32917286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 2727801 - 2727859
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    |||||||||||  ||| |||||||||||||| | |||||||||||||||| ||| ||||    
T  2727801 ctgtttggattggcttgtttgagcttatctaatcgcataaacacttgtgacactgtttg 2727859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 346
Target Start/End: Complemental strand, 7148817 - 7148767
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    ||||||| || ||||||||||||||||||| | |||||| |||||||||||    
T  7148817 tgtttggtttgacttatttgagcttatctagtcgcataagcacttgtgaga 7148767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 333
Target Start/End: Original strand, 9202903 - 9202941
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcata 333  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  9202903 ctgtttggattgacttatttgagcttatctactggcata 9202941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 353
Target Start/End: Complemental strand, 30863402 - 30863340
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||||||||||| | |||||||||||| ||| || | |||||||||||||| ||||| ||||    
T  30863402 gggcctgtttggagtgacttatttgagcctatttattggcataaacacttgttagactctttg 30863340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 346
Target Start/End: Complemental strand, 33737881 - 33737831
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||| ||||| ||||||||||| |||||||||| |||||||||||| ||||    
T  33737881 tgttaggattgacttatttgagtttatctactaccataaacacttgagaga 33737831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 334
Target Start/End: Complemental strand, 103584 - 103543
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    ||||||||||||| |||||||||||||||| || ||||||||    
T  103584 gcctgtttggattgacttatttgagcttatatattagcataa 103543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 738461 - 738510
Alignment:
Q  297 gtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    ||||||||||||||||||||||||||||| |   ||||||| ||||||||    
T  738461 gtttggattaacttatttgagcttatctattgagataaacatttgtgaga 738510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 7901750 - 7901807
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    |||||||||||||||||||||| |||| || || ||||| | ||||||||||| ||||    
T  7901750 tgtttggattaacttatttgagtttatatagtatcataagcccttgtgagactgtttg 7901807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 8420115 - 8420168
Alignment:
Q  296 tgtttggattaactt-atttgagcttatctactagcataaacacttgtgagact 348  Q
    |||||||||| |||| ||||||||||||||| |  |||||||||||||||||||    
T  8420115 tgtttggattgactttatttgagcttatctattgacataaacacttgtgagact 8420168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 334
Target Start/End: Complemental strand, 31338123 - 31338090
Alignment:
Q  301 ggattaacttatttgagcttatctactagcataa 334  Q
    ||||| ||||||||||||||||||||||||||||    
T  31338123 ggattgacttatttgagcttatctactagcataa 31338090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 848145 - 848102
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    ||||||||||||||||  |||||||||||||||||| ||||||||    
T  848145 agggcctgtttggattgccttatttgagcttatcta-tagcataa 848102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 7485051 - 7485103
Alignment:
Q  289 aagggcctgtttggattaacttatttgagcttatctactagcataaacacttg 341  Q
    ||||||||||||||||  |||| |||| ||||||||||| | |||||||||||    
T  7485051 aagggcctgtttggatatacttgtttgtgcttatctactggtataaacacttg 7485103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 324
Target Start/End: Original strand, 9109025 - 9109061
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatct 324  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  9109025 taagggcctgtttggattaacttacttgagtttatct 9109061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 344
Target Start/End: Complemental strand, 13908391 - 13908343
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtga 344  Q
    |||||| ||| |||||||||| ||||||||||  |||||||||||||||    
T  13908391 tgtttgaattgacttatttgaacttatctactgacataaacacttgtga 13908343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 28005473 - 28005537
Alignment:
Q  294 cctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||| ||||| || ||||||||||| ||||| |||||| ||||||| ||||| ||| |||||    
T  28005473 cctgtttagattagctcatttgagcttacctactggcataagcacttgtaagactgtttaagaga 28005537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 29052850 - 29052890
Alignment:
Q  308 cttatttgagcttatctactagcataaacacttgtgagact 348  Q
    ||||||||| || |||||||||||||| |||||||||||||    
T  29052850 cttatttgaactaatctactagcataagcacttgtgagact 29052890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 30536879 - 30536915
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctact 327  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  30536879 gggcctgtttggattgacttatttgagtttatctact 30536915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 344
Target Start/End: Original strand, 31776191 - 31776239
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtga 344  Q
    |||||||||| |||||||||||||||||||||   ||| ||||||||||    
T  31776191 tgtttggattgacttatttgagcttatctactgatatatacacttgtga 31776239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 27123268 - 27123333
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||||||||||||||||||||||  ||||||||||  |||||||||||| |||||||||    
T  27123268 gcctgtttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagaga 27123333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 296 - 356
Target Start/End: Original strand, 56186817 - 56186877
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgaga 356  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||||||||||||| ||||    
T  56186817 tgtttggattaacttattcgagtttatctactaacataaacacttgtgagactattcgaga 56186877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 18512433 - 18512492
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttga 354  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||||||||||| ||||    
T  18512433 ctgtttcgattaacttatttgagcttatctactgacataaacacttgtgagactagttga 18512492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 345
Target Start/End: Complemental strand, 21953430 - 21953375
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgag 345  Q
    |||| ||||||||||| ||||||||||||||||||| |||||||| ||||||||||    
T  21953430 agggtctgtttggattgacttatttgagcttatctagtagcataatcacttgtgag 21953375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 28615486 - 28615435
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||    
T  28615486 ctgtttggattgacttatttaagtttatctactagcataaacacttgtgaga 28615435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 348
Target Start/End: Original strand, 32420979 - 32421029
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||    
T  32420979 tttggattgacttatttgagcttacctactagcataagcacttgtgagact 32421029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 24193683 - 24193634
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgag 345  Q
    |||||||||| |||||||||||||||||| || |||||||||||||||||    
T  24193683 tgtttggattgacttatttgagcttatctcctggcataaacacttgtgag 24193634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 357
Target Start/End: Original strand, 46187828 - 46187889
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagag 357  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| ||||||| ||| ||||    
T  46187828 tgtttggatgatcttatttgagcttatctactggcataaacacttatgagactgtttaagag 46187889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 7367967 - 7368035
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||| ||||||||||| ||||||||||| ||||||||  |||||||| ||||||||||| |||| ||||    
T  7367967 agggtctgtttggattgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgggaga 7368035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 47399642 - 47399574
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||| ||||||| |||||||||||||| ||||| |||| ||||||| ||||||||||||  ||||||||    
T  47399642 agggtctgtttgaattaacttatttgaacttatatactggcataaaaacttgtgagactgattgagaga 47399574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 356
Target Start/End: Original strand, 55870261 - 55870321
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgaga 356  Q
    |||||||||||||||||||||| ||||||| |  |||||||| |||||||||| |||||||    
T  55870261 tgtttggattaacttatttgagtttatctaatgacataaacatttgtgagactctttgaga 55870321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 327
Target Start/End: Original strand, 17822780 - 17822815
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctact 327  Q
    ||||||||||||||||||||||||||||||||||||    
T  17822780 ggcctgtttggattaacttatttgagcttatctact 17822815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 353
Target Start/End: Complemental strand, 50746124 - 50746069
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    |||| ||| ||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  50746124 tttgtattgacttatttgagtttatctacttgcataagcacttgtgagactatttg 50746069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 353
Target Start/End: Complemental strand, 1017176 - 1017122
Alignment:
Q  299 ttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||||| ||||||||||||| |||||||  ||||||||||||||||||| ||||    
T  1017176 ttggattgacttatttgagctaatctactgacataaacacttgtgagactgtttg 1017122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 340
Target Start/End: Original strand, 3637299 - 3637341
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacactt 340  Q
    |||||||| ||||||||||||||||||| ||||||||||||||    
T  3637299 tttggattgacttatttgagcttatctattagcataaacactt 3637341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 17975255 - 17975313
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||||||||| |||||||||||||||||||| | || |||||||||| | ||||||||    
T  17975255 ctgtttggattgacttatttgagcttatctaccaacacaaacacttgtcaaactatttg 17975313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 18815182 - 18815136
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||||    
T  18815182 taagggcctgtttggattggcttatttgagcttacctactagcataa 18815136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 348
Target Start/End: Complemental strand, 25896933 - 25896883
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||||||| ||||||||||| |||||||||||||| | |||||||||||||    
T  25896933 tttggattcacttatttgagtttatctactagcattagcacttgtgagact 25896883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 32421251 - 32421189
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||| |||||||||||| |||  ||||||||||  ||||||||||||| ||||||||    
T  32421251 tgtttggattgacttatttgagcatattcactagcataaggacttgtgagactacttgagaga 32421189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 334
Target Start/End: Original strand, 39691064 - 39691106
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    |||||||||| ||| ||||||||||||||||||||||||||||    
T  39691064 ggcctgtttgaattgacttatttgagcttatctactagcataa 39691106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 358
Target Start/End: Original strand, 2977896 - 2977957
Alignment:
Q  297 gtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||||||||||||||| ||||| | |||||| ||| ||||||||| ||| |||||    
T  2977896 gtttggattaacttatttgagctgatctagtggcataagcacgtgtgagactgtttaagaga 2977957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 23320010 - 23319965
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcata 333  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||    
T  23320010 taagggcctgtttggattggcttatttgagattatctactagcata 23319965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 344
Target Start/End: Complemental strand, 1075597 - 1075561
Alignment:
Q  308 cttatttgagcttatctactagcataaacacttgtga 344  Q
    |||||||||||||||||||| ||||||||||||||||    
T  1075597 cttatttgagcttatctactggcataaacacttgtga 1075561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 358
Target Start/End: Original strand, 18628486 - 18628534
Alignment:
Q  310 tatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||||||||||  ||||||||||||||||||| |||| ||||    
T  18628486 tatttgagcttatctactgacataaacacttgtgagactgtttgggaga 18628534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 358
Target Start/End: Original strand, 19429391 - 19429451
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||  ||||||||||||||| |||| | |||||||||||||||||| |||| ||||    
T  19429391 tttggattggcttatttgagcttatttactggtataaacacttgtgagactgtttgggaga 19429451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 22662165 - 22662213
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataaacact 339  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||| ||||    
T  22662165 gggcctgtttggattgacttatttgagtttatctactaacataagcact 22662213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 22666644 - 22666692
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataaacact 339  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||| ||||    
T  22666644 gggcctgtttggattgacttatttgagtttatctactaacataagcact 22666692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 35571544 - 35571588
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    |||| |||||||||||  |||||||||||||||||||||||||||    
T  35571544 agggtctgtttggattggcttatttgagcttatctactagcataa 35571588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 47146101 - 47146033
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||| |||||||| |||||||||| ||||| || | |||||| |||||||||||||| ||| ||||    
T  47146101 agggcctatttggattgacttatttgaacttatatattggcataagcacttgtgagactacttgggaga 47146033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 356
Target Start/End: Complemental strand, 4691986 - 4691939
Alignment:
Q  309 ttatttgagcttatctactagcataaacacttgtgagactatttgaga 356  Q
    |||||||||||||||||||  || || |||||||||||||||||||||    
T  4691986 ttatttgagcttatctactgtcacaatcacttgtgagactatttgaga 4691939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 11264453 - 11264390
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||||  ||||||||||  ||||||||||||||||||  ||||||||| |||| ||||    
T  11264453 ctgtttggattggcttatttgagtctatctactagcataaacatctgtgagactgtttgggaga 11264390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 327
Target Start/End: Original strand, 27043741 - 27043780
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctact 327  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  27043741 taagggtctgtttggattgacttatttgagcttatctact 27043780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 323
Target Start/End: Original strand, 42403934 - 42403969
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatc 323  Q
    |||||||||||||||||| |||||||||||||||||    
T  42403934 taagggcctgtttggattgacttatttgagcttatc 42403969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 2811622 - 2811560
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||| ||| ||||||||||| ||||||||| |||||| || || ||||||| |||||||||    
T  2811622 tgtttgaattgacttatttgaggttatctactggcataagcatttatgagactgtttgagaga 2811560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 358
Target Start/End: Original strand, 37575855 - 37575917
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||| ||||||||||| |||||| ||||||||||| || |||| | | |||||||||    
T  37575855 tgtttggattgacttatttgagtttatctgctagcataaactctcgtgacattgtttgagaga 37575917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 52333755 - 52333693
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactattt 352  Q
    ||||||||||| ||||  ||||||||||||||| ||||  | ||| |||||||||||||||||    
T  52333755 agggcctgtttcgattggcttatttgagcttatttactgacctaagcacttgtgagactattt 52333693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 10365923 - 10365866
Alignment:
Q  299 ttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgaga 356  Q
    ||||||| |||||||| | ||||||||||  |||||||||| | ||||||||||||||    
T  10365923 ttggattgacttatttaatcttatctactgacataaacactggagagactatttgaga 10365866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 353
Target Start/End: Original strand, 29126174 - 29126239
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||||| ||||||||||  |||||||||||||||||||  |||||| |||||  || ||||||||    
T  29126174 taagggcttgtttggattggcttatttgagcttatctaccggcataagcacttacgaaactatttg 29126239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 348
Target Start/End: Original strand, 30338545 - 30338586
Alignment:
Q  307 acttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||| |||||||||||||||| | ||||||||||||||||||    
T  30338545 acttttttgagcttatctactgggataaacacttgtgagact 30338586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 317
Target Start/End: Complemental strand, 41512798 - 41512769
Alignment:
Q  288 taagggcctgtttggattaacttatttgag 317  Q
    ||||||||||||||||||||||||||||||    
T  41512798 taagggcctgtttggattaacttatttgag 41512769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 334
Target Start/End: Complemental strand, 54426197 - 54426156
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    |||||||||||||  |||||||||||||||||||| ||||||    
T  54426197 gcctgtttggattggcttatttgagcttatctactggcataa 54426156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 358
Target Start/End: Original strand, 21469848 - 21469904
Alignment:
Q  303 attaacttatttgagcttatctactagcataaacac-ttgtgagactatttgagaga 358  Q
    |||| ||||||||||||||||||| | ||||||||| |||| | |||||||||||||    
T  21469848 attagcttatttgagcttatctacaaacataaacactttgtaacactatttgagaga 21469904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 346
Target Start/End: Original strand, 22772389 - 22772445
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||||||||||||||| ||| ||||    |||||||||||||||||||||| |||||    
T  22772389 agggcctgtttggattgactcatttagttttatctactagcataaacacttttgaga 22772445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 22796806 - 22796754
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||||||||| | ||||||||| |||||||||||||||| || || |||||||    
T  22796806 tgtttggattgatttatttgagtttatctactagcataagcatttatgagact 22796754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 342
Target Start/End: Original strand, 25487482 - 25487522
Alignment:
Q  302 gattaacttatttgagcttatctactagcataaacacttgt 342  Q
    |||||||||||||||| ||||||| |||||||| |||||||    
T  25487482 gattaacttatttgagtttatctattagcataagcacttgt 25487522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 326
Target Start/End: Complemental strand, 32769536 - 32769500
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctac 326  Q
    |||||||||||||||| |||||||| |||||||||||    
T  32769536 agggcctgtttggattgacttattttagcttatctac 32769500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 333
Target Start/End: Original strand, 44638138 - 44638182
Alignment:
Q  289 aagggcctgtttggattaacttatttgagcttatctactagcata 333  Q
    |||||| |||||||||| ||||||||||| |||| ||||||||||    
T  44638138 aagggcatgtttggattgacttatttgagtttatttactagcata 44638182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 53315483 - 53315415
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||| ||||||||||| ||||||||||||||||| ||| | |||| ||| | | |||||||||| ||||    
T  53315483 agggtctgtttggattgacttatttgagcttatccactggtataagcacatataagactatttgtgaga 53315415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 55414326 - 55414370
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    |||||||||||||||| |||||||||||  |||||||| ||||||    
T  55414326 agggcctgtttggattgacttatttgagagtatctactggcataa 55414370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 288 - 351
Target Start/End: Complemental strand, 9174975 - 9174912
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatt 351  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||||| || |||||||||||    
T  9174975 taagggcatgtttggattgacttatttgagcttatctattagcataaacgctcgtgagactatt 9174912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 298 - 353
Target Start/End: Complemental strand, 31723954 - 31723899
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  31723954 tttggattgacttatttgagcttatgtactagcataaacacttatgagactatttg 31723899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 40335788 - 40335849
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    |||||||||||||| ||||||||||| ||||||||| ||| |||||||||||||||| ||||    
T  40335788 ggcctgtttggattgacttatttgagtttatctactcgcacaaacacttgtgagactgtttg 40335849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 14599285 - 14599353
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||||||||| | |||||||| ||||| ||||||||||||||||||| ||| | |||||||||    
T  14599285 agggcctgtttggattcagttatttgaacttatttactagcataaacacttgtaagattgtttgagaga 14599353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 351
Target Start/End: Original strand, 8651263 - 8651326
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatt 351  Q
    ||||||| ||||||||||  ||||||||||||||||| |||||||||||||| |||||| ||||    
T  8651263 taagggcatgtttggattgccttatttgagcttatcttctagcataaacactcgtgagagtatt 8651326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 11153357 - 11153416
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagac 347  Q
    |||||| |||||||||||  ||| |||||||||||||||||||||||||||||| |||||    
T  11153357 taaggggctgtttggattggcttgtttgagcttatctactagcataaacacttgcgagac 11153416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 334
Target Start/End: Original strand, 7705909 - 7705955
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||    
T  7705909 taagggcctgtttggattgacttatttgagcatatctactagcataa 7705955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 25705575 - 25705628
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    ||||||||||||||| |||||||| ||||||||||| ||||| |||||||||||    
T  25705575 gcctgtttggattaaattatttgaacttatctactaacataagcacttgtgaga 25705628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 25720334 - 25720398
Alignment:
Q  294 cctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||| |||| |||||||||| ||||||||| |||||| ||||||||||||| | |||||||    
T  25720334 cctgtttgaattagcttatttgaggttatctactggcataagcacttgtgagactgtctgagaga 25720398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 26004914 - 26004962
Alignment:
Q  294 cctgtttggattaacttatttgagcttatctactagcataaacacttgt 342  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||||||    
T  26004914 cctgtttggattgacttattttagcttatctactagcataagcacttgt 26004962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 34198573 - 34198513
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgag 355  Q
    ||||||||||| ||||||||||| |||| ||||| ||||||||||||||| || |||||||    
T  34198573 ctgtttggattgacttatttgagtttatttactaacataaacacttgtgataccatttgag 34198513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 36796626 - 36796678
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||||||||| ||||||||||||||||||| |  |||||||||||||||||||    
T  36796626 tgtttggattgacttatttgagcttatctaatgacataaacacttgtgagact 36796678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 307 - 358
Target Start/End: Complemental strand, 444062 - 444011
Alignment:
Q  307 acttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||||||||||| | |||||||||||||||||||| |||| ||||    
T  444062 acttatttgagcttatctaattgcataaacacttgtgagactgtttgggaga 444011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 6938648 - 6938695
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataaacact 339  Q
    |||||||||||||||  |||||||||||||||||||||||||| ||||    
T  6938648 ggcctgtttggattaggttatttgagcttatctactagcataagcact 6938695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 357
Target Start/End: Original strand, 10771809 - 10771868
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagag 357  Q
    ||||||||  |||||||||||||||||||| |||||| ||||||||||| | ||||||||    
T  10771809 tttggattggcttatttgagcttatctactggcataagcacttgtgagattgtttgagag 10771868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 41277274 - 41277333
Alignment:
Q  289 aagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    ||||||||||||||||| | |||||||| ||||| ||||| |||||| ||||||||||||    
T  41277274 aagggcctgtttggatttatttatttgaacttatgtactaccataaatacttgtgagact 41277333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 11105056 - 11104994
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||| | ||||||||||||||| || ||||||| ||||||||| |||||||| ||||    
T  11105056 tgtttggattgatttatttgagcttatcaaccagcataagcacttgtgatactatttgggaga 11104994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 346
Target Start/End: Complemental strand, 13508590 - 13508541
Alignment:
Q  297 gtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||||| || |||||||||| |||||||||| ||||||||||||||||||    
T  13508590 gtttggcttgacttatttgaacttatctactggcataaacacttgtgaga 13508541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 358
Target Start/End: Original strand, 21782576 - 21782637
Alignment:
Q  297 gtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||| || ||||||||||  ||||||||| ||||||||||||||||| || |||||||||    
T  21782576 gtttggcttgacttatttgaaattatctactggcataaacacttgtgaggctgtttgagaga 21782637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 35135569 - 35135626
Alignment:
Q  294 cctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatt 351  Q
    ||||||||||||||||||||| ||||| ||||||  ||||| ||||||||| ||||||    
T  35135569 cctgtttggattaacttatttcagcttctctactgacataaccacttgtgatactatt 35135626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 325
Target Start/End: Complemental strand, 35299924 - 35299887
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatcta 325  Q
    |||||||||||||||||| |||||||||||||||||||    
T  35299924 taagggcctgtttggattgacttatttgagcttatcta 35299887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 11615575 - 11615619
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgt 342  Q
    ||||||||  ||||||||||||||||||||| |||||||||||||    
T  11615575 tttggattggcttatttgagcttatctactaacataaacacttgt 11615619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 12242623 - 12242691
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||||| |||||||||||||||  |||||||| | || | || |||||||| |||||||||||    
T  12242623 agggcctgtttgcattaacttatttgagactatctactggtatgagcatttgtgagattatttgagaga 12242691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 346
Target Start/End: Original strand, 14706205 - 14706253
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||||||| ||||||||||||||| |||||  |||||||||||||||||    
T  14706205 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 14706253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 16937800 - 16937840
Alignment:
Q  294 cctgtttggattaacttatttgagcttatctactagcataa 334  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  16937800 cctgtttggattggcttatttgagcttatctactagcataa 16937840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 10638453 - 10638516
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||| |||||||| || |||||||| | ||||| ||||||| |||||||||| ||||    
T  10638453 ctgtttggattgacttatttaagattatctaccaacataagcacttgtaagactatttgggaga 10638516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 11297114 - 11297173
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttga 354  Q
    ||||||| ||| |||||||| |||||||||| | |||||||||||||| ||||| |||||    
T  11297114 ctgtttgaattgacttatttaagcttatctagtggcataaacacttgtaagactgtttga 11297173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 327
Target Start/End: Complemental strand, 14331525 - 14331486
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctact 327  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  14331525 taagggtctgtttggattgacttatttgagcttatctact 14331486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 17368826 - 17368775
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataaacacttgtga 344  Q
    ||||||||||||| |||||||| | |||||||||| |||||| |||||||||    
T  17368826 gcctgtttggattgacttatttaaacttatctactggcataagcacttgtga 17368775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 38028692 - 38028625
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||||||   ||||||||||||||||||||| | || || |||| ||||||||||| |||||    
T  38028692 gggcctgtttggaccgacttatttgagcttatctactggtatgaaaacttatgagactatttcagaga 38028625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 344
Target Start/End: Original strand, 41112830 - 41112865
Alignment:
Q  309 ttatttgagcttatctactagcataaacacttgtga 344  Q
    ||||||||||||||||||| ||||||||||||||||    
T  41112830 ttatttgagcttatctacttgcataaacacttgtga 41112865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 348
Target Start/End: Complemental strand, 2092508 - 2092458
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||||||  ||||||||||| ||||||||||||||||| ||||||| ||||    
T  2092508 tttggatcgacttatttgagtttatctactagcataaatacttgtgggact 2092458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 8820911 - 8820873
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataa 334  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  8820911 tgtttggatttacttatttgatcttatctactagcataa 8820873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 17369356 - 17369306
Alignment:
Q  294 cctgtttggattaacttatttgagcttatctactagcataaacacttgtga 344  Q
    |||||||||||| |||||||||| ||||||||||  ||||| |||||||||    
T  17369356 cctgtttggattgacttatttgaacttatctactgacataatcacttgtga 17369306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 358
Target Start/End: Original strand, 42180992 - 42181066
Alignment:
Q  284 tgagtaagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||| |||| ||||||||||| ||| |||||| ||||| ||||||||||  || ||||||||| ||||| ||||    
T  42180992 tgagtcaggggctgtttggattgactaatttgaacttatttactagcatatgcatttgtgagacaatttgggaga 42181066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 1899293 - 1899252
Alignment:
Q  307 acttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||||||||||||||| ||||||||||||||  |||||||||    
T  1899293 acttatttgagcttatttactagcataaacatatgtgagact 1899252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 5946487 - 5946524
Alignment:
Q  300 tggattaacttatttgagcttatctactagcataaaca 337  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  5946487 tggattgacttatttgaacttatctactagcataaaca 5946524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 340
Target Start/End: Complemental strand, 6717266 - 6717221
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacactt 340  Q
    ||||||| ||| |||||||| ||||||||| |||||||||||||||    
T  6717266 ctgtttgaattgacttatttaagcttatctgctagcataaacactt 6717221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 355
Target Start/End: Original strand, 6773298 - 6773363
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgag 355  Q
    |||| |||||||||||||||||||||| ||| |||||||| | || ||||  ||||||| ||||||    
T  6773298 agggactgtttggattaacttatttgaacttttctactagtacaaccactactgagactgtttgag 6773363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 358
Target Start/End: Complemental strand, 8090082 - 8090025
Alignment:
Q  301 ggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||| |||||||||| ||||||||||| || || |||| | ||||||||||||||||    
T  8090082 ggattgacttatttgaacttatctactaacacaagcactcgcgagactatttgagaga 8090025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 11457238 - 11457197
Alignment:
Q  307 acttatttgagcttatctactagcataaacacttgtgagact 348  Q
    ||||||||||||||||||| | ||| ||||||||||||||||    
T  11457238 acttatttgagcttatctattggcagaaacacttgtgagact 11457197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Complemental strand, 32172791 - 32172754
Alignment:
Q  309 ttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  32172791 ttatttgagcttatatactagcataagcacttgtgaga 32172754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 326
Target Start/End: Complemental strand, 39594965 - 39594928
Alignment:
Q  289 aagggcctgtttggattaacttatttgagcttatctac 326  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  39594965 aagggcttgtttggattgacttatttgagcttatctac 39594928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 358
Target Start/End: Complemental strand, 4855840 - 4855784
Alignment:
Q  302 gattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||| |||||||||||||||| || |  | ||||||||||||||||| |||||||||    
T  4855840 gattgacttatttgagcttatataatgacttaaacacttgtgagactgtttgagaga 4855784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 327
Target Start/End: Original strand, 6715869 - 6715901
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctact 327  Q
    ||||||||||||||||||| |||||||||||||    
T  6715869 ctgtttggattaacttattcgagcttatctact 6715901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 358
Target Start/End: Complemental strand, 10303961 - 10303885
Alignment:
Q  282 cttgagtaagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||| |||||| |||||| ||||  | |||||||||||||||||   ||||| || |||||||| |||||||||||    
T  10303961 cttgattaagggtctgtttagattggcatatttgagcttatctacggacataagcatttgtgagattatttgagaga 10303885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 10391499 - 10391443
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    ||||||||||| ||||  ||||||| ||||||||| || |||||| |||||||||||    
T  10391499 agggcctgtttcgattggcttatttaagcttatctgctggcataatcacttgtgaga 10391443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 10640109 - 10640073
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctact 327  Q
    |||||||||||||||| |||||||||| |||||||||    
T  10640109 gggcctgtttggattagcttatttgagtttatctact 10640073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 10798341 - 10798393
Alignment:
Q  294 cctgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||||||||||| | |||||| |||||||||||||| |||  |||||||||||    
T  10798341 cctgtttggattgatttattttagcttatctactagtatatgcacttgtgaga 10798393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 12407659 - 12407711
Alignment:
Q  306 aacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||| |||||||| |  ||||||||||||||||||  |||||||||    
T  12407659 aacttatttgaacttatctattgacataaacacttgtgagacggtttgagaga 12407711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 358
Target Start/End: Complemental strand, 14980658 - 14980598
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||| | ||||||||||||||||||||| |||||| ||||   |||||| |||||||||    
T  14980658 tttggaatgacttatttgagcttatctactggcataagcactatagagactgtttgagaga 14980598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 340
Target Start/End: Original strand, 18897633 - 18897681
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataaacactt 340  Q
    |||||||||||||| |  ||||||| ||||||||||||||||| |||||    
T  18897633 ggcctgtttggattgaagtatttgaacttatctactagcataagcactt 18897681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 358
Target Start/End: Complemental strand, 19177594 - 19177534
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||| ||||||||||| ||| ||| | |||| ||||||||||||||| |||| ||||    
T  19177594 tttggattgacttatttgagtttacctattggcatgaacacttgtgagactgtttgggaga 19177534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 358
Target Start/End: Complemental strand, 32849327 - 32849267
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||| ||| |||||||| ||||||||||||| ||||| |||||||||| || |||| ||||    
T  32849327 tttgaattgacttatttaagcttatctactatcataagcacttgtgaggctgtttgggaga 32849267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 34117479 - 34117519
Alignment:
Q  308 cttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||||| ||||||||||||| |||||||||||||| |||||    
T  34117479 cttattggagcttatctactggcataaacacttgttagact 34117519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 34975528 - 34975457
Alignment:
Q  282 cttgagtaagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttga 354  Q
    ||||||| ||||  |||||| ||| ||||||| |||||||||||||| ||||| ||||| ||||||| |||||    
T  34975528 cttgagtcaggggttgtttgaattgacttatt-gagcttatctactaacataatcacttatgagactgtttga 34975457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 35960569 - 35960502
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||| ||||||| |||||||||||||||||||| | | |||||| ||  ||| |||||||||||||||    
T  35960569 agggcttgtttgggttaacttatttgagcttatcaattggcataagca-atgtcagactatttgagaga 35960502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 39257325 - 39257365
Alignment:
Q  308 cttatttgagcttatctactagcataaacacttgtgagact 348  Q
    ||||||| ||||||||||||| ||||| |||||||||||||    
T  39257325 cttatttaagcttatctactaacataagcacttgtgagact 39257365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 42034215 - 42034167
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataaacactt 340  Q
    ||||||||||||||| |||||||||||||| |||||  ||||| |||||    
T  42034215 ggcctgtttggattagcttatttgagcttacctactgacataagcactt 42034167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 41170763 - 41170704
Alignment:
Q  294 cctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||||||||||  |||||||||| |||||||||| ||||||||||||||||||||||||    
T  41170763 cctgtttggattggcttatttgagtttatctactaacataaacacttgtgagactatttg 41170704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 13867029 - 13866967
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||| || ||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  13867029 tgtttggattgacctatttgagcttatctactgccataaacacttgtgagactgtttgagaga 13866967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 15370238 - 15370299
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    |||||||||||||| ||||||||||||||||||||| |||||| || |||||||||| ||||    
T  15370238 ggcctgtttggattgacttatttgagcttatctactggcataagcatttgtgagactgtttg 15370299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 28810363 - 28810420
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgag 345  Q
    |||||||||||||||||| |||||||||||||| |||| | |||||||||||||||||    
T  28810363 taagggcctgtttggattgacttatttgagcttctctattggcataaacacttgtgag 28810420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 9996897 - 9996837
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||||  ||||||||||||    
T  9996897 taagggcctgtttggcttgacttatttgagcttatcaactagcataagtacttgtgagact 9996837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 28803445 - 28803511
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||| |||||||| ||||||||||||||||||||  |||||| ||| ||||||||| |||||||||    
T  28803445 ggcctatttggattgacttatttgagcttatctaccggcataagcacatgtgagactgtttgagaga 28803511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 355
Target Start/End: Original strand, 2964722 - 2964787
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgag 355  Q
    ||||| ||||||||||||||||||||| |||||||||  ||||||||||||| |||| | ||||||    
T  2964722 agggcatgtttggattaacttatttgaacttatctaccggcataaacacttgcgagaatgtttgag 2964787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 15120335 - 15120286
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtga 344  Q
    ||||||||||| |||||||||| |||||||||||||||||||| ||||||    
T  15120335 ctgtttggattgacttatttgaacttatctactagcataaacagttgtga 15120286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 6548041 - 6547981
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgag 355  Q
    ||||||||||| |||||||  |||||||||||||||||||  |||||||||||| ||||||    
T  6548041 ctgtttggattgacttattcaagcttatctactagcataagaacttgtgagactgtttgag 6547981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 33931481 - 33931537
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtga 344  Q
    |||||| |||| |||||||||||||||||||||| ||| |||||||| |||||||||    
T  33931481 taagggtctgtctggattaacttatttgagcttacctaatagcataagcacttgtga 33931537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 450003 - 449960
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    |||| |||||| ||||||||||||||||||||||||||||||||    
T  450003 gggcatgtttgcattaacttatttgagcttatctactagcataa 449960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 10563472 - 10563527
Alignment:
Q  289 aagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtga 344  Q
    ||||||||||||||||| |||||||||| ||||||||| ||||||| || ||||||    
T  10563472 aagggcctgtttggattgacttatttgaacttatctaccagcataagcaattgtga 10563527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 3078526 - 3078584
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||||||||| |||||||||||||||||||| | || |||||||||| | ||||||||    
T  3078526 ctgtttggattgacttatttgagcttatctaccaacacaaacacttgtcaaactatttg 3078584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 11514047 - 11513985
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||   ||||||||| |||||||||||||||| ||||||||||||| ||| |||||    
T  11514047 tgtttggattggtttatttgagattatctactagcataagcacttgtgagactgttttagaga 11513985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 22878249 - 22878187
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||| ||||||||||||||||| |||  ||||| ||||||||||||| |||| ||||    
T  22878249 tgtttggattgacttatttgagcttatccactgacataagcacttgtgagactgtttgggaga 22878187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 35329737 - 35329787
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    |||||||||| |||||| ||||||||||||||| |||||||||| ||||||    
T  35329737 tgtttggattgacttatgtgagcttatctactaccataaacactagtgaga 35329787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 43259996 - 43259938
Alignment:
Q  286 agtaagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtga 344  Q
    ||||||||  ||||||||||  ||||||||| ||||||||||||||||| |||||||||    
T  43259996 agtaagggattgtttggattggcttatttgaacttatctactagcataagcacttgtga 43259938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 2790397 - 2790337
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    ||||||||||||||||||  ||||||||| |||||||||||| ||||  |||||| |||||    
T  2790397 taagggcctgtttggattggcttatttgaacttatctactagtataagtacttgtcagact 2790337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 353
Target Start/End: Complemental strand, 29430896 - 29430852
Alignment:
Q  309 ttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    |||||||||||||||||||  |||||||||||||| |||||||||    
T  29430896 ttatttgagcttatctactgacataaacacttgtgggactatttg 29430852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 33981270 - 33981222
Alignment:
Q  300 tggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    ||||||| |||||||||||||| |||||||| ||| |||||||||||||    
T  33981270 tggattagcttatttgagcttacctactagcttaagcacttgtgagact 33981222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 35713338 - 35713286
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    |||||| ||| | ||||||||||| ||||||| ||||||||||||||||||||    
T  35713338 tgtttgtattgatttatttgagctaatctacttgcataaacacttgtgagact 35713286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 358
Target Start/End: Complemental strand, 35810012 - 35809956
Alignment:
Q  302 gattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||| ||||||||||||||||||||  |||||| || ||||||||||||||| ||||    
T  35810012 gattgacttatttgagcttatctaccggcataagcagttgtgagactatttgggaga 35809956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 351
Target Start/End: Complemental strand, 36677804 - 36677748
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactag-cataaacacttgtgagactatt 351  Q
    |||||||||||||||||||||| ||||||| | | ||||| ||||||||||||||||    
T  36677804 tgtttggattaacttatttgagtttatctatttgacataagcacttgtgagactatt 36677748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 344
Target Start/End: Complemental strand, 39567981 - 39567945
Alignment:
Q  308 cttatttgagcttatctactagcataaacacttgtga 344  Q
    ||||||||||||||||||| |||||||||||||||||    
T  39567981 cttatttgagcttatctaccagcataaacacttgtga 39567945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 348
Target Start/End: Complemental strand, 40759315 - 40759259
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    ||||||||||||||  |||||||||||||||||| |  ||||| |||||||||||||    
T  40759315 ggcctgtttggattgccttatttgagcttatctattgacataagcacttgtgagact 40759259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 346
Target Start/End: Original strand, 12313087 - 12313142
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    ||||||||||| |||| ||||||||| |||| | |||||||||| |||||||||||    
T  12313087 gggcctgtttgtattagcttatttgatcttacccactagcataagcacttgtgaga 12313142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 348
Target Start/End: Complemental strand, 14302960 - 14302921
Alignment:
Q  309 ttatttgagcttatctactagcataaacacttgtgagact 348  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  14302960 ttatttgagcttatctattagcataaacatttgtgagact 14302921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 18179101 - 18179062
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataa 334  Q
    ||||||||||| |||||||||||||||||||||| |||||    
T  18179101 ctgtttggattgacttatttgagcttatctactaacataa 18179062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 324
Target Start/End: Complemental strand, 26202185 - 26202151
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatct 324  Q
    ||||||||||||||||||||||||||| |||||||    
T  26202185 agggcctgtttggattaacttatttgaacttatct 26202151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 358
Target Start/End: Original strand, 33197180 - 33197242
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||| ||||||||||| ||||| |||  |||  | ||||||||||||||||||||||    
T  33197180 tgtttggattgacttatttgagtttatcaactgacattgatacttgtgagactatttgagaga 33197242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 353
Target Start/End: Complemental strand, 757608 - 757543
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    ||||||| ||||||| ||  | ||||||||||||| |||||||||||| |||| ||||||| ||||    
T  757608 taagggcttgtttgggttggcatatttgagcttatttactagcataaatacttatgagactgtttg 757543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 343
Target Start/End: Complemental strand, 1830196 - 1830143
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtg 343  Q
    |||||||||||||||| ||||||||||| |||| ||||  ||||| ||||||||    
T  1830196 agggcctgtttggattgacttatttgagtttatttactgacataagcacttgtg 1830143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 334
Target Start/End: Original strand, 5043476 - 5043517
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    |||| |||||||| |||||||||| |||||||||||||||||    
T  5043476 gcctttttggattgacttatttgaccttatctactagcataa 5043517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 325
Target Start/End: Original strand, 7928209 - 7928246
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatcta 325  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  7928209 taagggcctgtttggattggcttatttgagcttatcta 7928246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 340
Target Start/End: Complemental strand, 24097961 - 24097916
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacactt 340  Q
    ||||||||||||| |||||||||||| |||||| | ||||||||||    
T  24097961 ctgtttggattaatttatttgagcttgtctacttggataaacactt 24097916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 326
Target Start/End: Complemental strand, 27317533 - 27317500
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctac 326  Q
    ||||||||||||| ||||||||||||||||||||    
T  27317533 gcctgtttggattgacttatttgagcttatctac 27317500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 334
Target Start/End: Complemental strand, 33503152 - 33503111
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    ||||||||| |||  |||||||||||||||||||||||||||    
T  33503152 gcctgtttgtattggcttatttgagcttatctactagcataa 33503111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 37276899 - 37276838
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 353  Q
    |||||||||||||  |||||||| || ||||||||||  |||| ||||||||||||| ||||    
T  37276899 ggcctgtttggatcgacttatttaagtttatctactaatataagcacttgtgagactgtttg 37276838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 334
Target Start/End: Original strand, 37448693 - 37448734
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataa 334  Q
    |||||||| |||| |||||||||||||||||||| |||||||    
T  37448693 gcctgtttagattgacttatttgagcttatctaccagcataa 37448734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 38076985 - 38077054
Alignment:
Q  289 aagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||| |||||| |||| || ||||||||||| |||| |  ||||||||||||||||| | |||||||||    
T  38076985 aagggtctgtttcgattgacatatttgagcttttctattcacataaacacttgtgagattgtttgagaga 38077054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 39983499 - 39983434
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||||||  |||||||||| ||||||||  |||||||  |||||||||||  ||||||||    
T  39983499 gcctgtttggatttgcttatttgaggttatctaccggcataaatccttgtgagactgattgagaga 39983434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 354
Target Start/End: Original strand, 43456627 - 43456684
Alignment:
Q  297 gtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttga 354  Q
    ||||||||| |||||||||| ||||| ||||  ||||||||||||| ||||| |||||    
T  43456627 gtttggatttacttatttgaacttatttactcacataaacacttgtaagactgtttga 43456684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 43569861 - 43569808
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    ||||||||| ||| ||||||||||| ||||| ||| ||||||||| ||||||||    
T  43569861 gcctgtttgaattgacttatttgaggttatccactggcataaacatttgtgaga 43569808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 43910929 - 43910993
Alignment:
Q  293 gcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||||| ||||||||||| |||| | | || |||| || ||||||||||||||||||||    
T  43910929 gcctgtttggattgacttatttgagtttat-ttccagaataagcatttgtgagactatttgagaga 43910993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 1633421 - 1633457
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataa 334  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  1633421 tttggatttacttatttgagtttatctactagcataa 1633457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 3973695 - 3973631
Alignment:
Q  294 cctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||||| ||||||||||||||||| |||   |||| ||||| | ||||| |||||||||    
T  3973695 cctgtttggattcacttatttgagcttatccactgatataagcacttataagactgtttgagaga 3973631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 326
Target Start/End: Complemental strand, 4607082 - 4607046
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctac 326  Q
    ||||||||||||||||  |||||||||||||||||||    
T  4607082 agggcctgtttggattggcttatttgagcttatctac 4607046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 326
Target Start/End: Original strand, 6772446 - 6772482
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctac 326  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  6772446 agggcatgtttggattgacttatttgagcttatctac 6772482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 11063352 - 11063288
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactattt 352  Q
    |||||| | |||||||||| ||||||||| ||||||||||| || || || ||| ||||||||||    
T  11063352 taagggtccgtttggattagcttatttgaacttatctactaacacaagcatttgcgagactattt 11063288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 14666688 - 14666648
Alignment:
Q  307 acttatttgagcttatctactagcataaacacttgtgagac 347  Q
    |||||||||||||||| ||||  ||||||||||||||||||    
T  14666688 acttatttgagcttatttacttccataaacacttgtgagac 14666648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 25609935 - 25609895
Alignment:
Q  308 cttatttgagcttatctactagcataaacacttgtgagact 348  Q
    ||||||||||||||||||||| |||||  ||||||||||||    
T  25609935 cttatttgagcttatctactaacataagaacttgtgagact 25609895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 30990357 - 30990401
Alignment:
Q  295 ctgtttggattaacttatttgagcttatctactagcataaacact 339  Q
    |||||||||||  ||||||||||||||||||||| ||||| ||||    
T  30990357 ctgtttggattggcttatttgagcttatctactaacataagcact 30990401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 31739919 - 31739951
Alignment:
Q  314 tgagcttatctactagcataaacacttgtgaga 346  Q
    ||||||||||||||| |||||||||||||||||    
T  31739919 tgagcttatctactaacataaacacttgtgaga 31739951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 35378445 - 35378497
Alignment:
Q  290 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgt 342  Q
    ||||| ||||||||||  ||||||||||||||| || |||||||| |||||||    
T  35378445 agggcatgtttggattggcttatttgagcttatataatagcataagcacttgt 35378497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 346
Target Start/End: Original strand, 35810726 - 35810774
Alignment:
Q  298 tttggattaacttatttgagcttatctactagcataaacacttgtgaga 346  Q
    ||||||| | ||||||  ||||||||||||||||||| |||||||||||    
T  35810726 tttggatcagcttattccagcttatctactagcataagcacttgtgaga 35810774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 38767493 - 38767553
Alignment:
Q  288 taagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 348  Q
    ||||| ||||||| ||||  |||||  ||||||||||||| |||||| |||||||||||||    
T  38767493 taaggccctgtttagattggcttatacgagcttatctactggcataagcacttgtgagact 38767553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 291 - 352
Target Start/End: Original strand, 159887 - 159948
Alignment:
Q  291 gggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactattt 352  Q
    |||||||||||||||  |||||||||||||||||||||  |||||||||||||| |||||||    
T  159887 gggcctgtttggattggcttatttgagcttatctactaatataaacacttgtgaaactattt 159948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 307 - 358
Target Start/End: Complemental strand, 6950 - 6899
Alignment:
Q  307 acttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||| ||||    
T  6950 acttatttgagtttatctactagcataaacacttgtgagactgtttgggaga 6899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 6697 - 6635
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||| |||||||||||||||| || | | |||| ||||||||||||  |||||||||    
T  6697 tgtttggattgacttatttgagcttatatattggtataatcacttgtgagacagtttgagaga 6635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 6695 - 6633
Alignment:
Q  296 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    |||||||||| |||||||||||||||| || | | |||| ||||||||||||  |||||||||    
T  6695 tgtttggattgacttatttgagcttatatattggtataatcacttgtgagacagtttgagaga 6633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 9693 - 9759
Alignment:
Q  292 ggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagaga 358  Q
    ||||| ||| |||| | ||||||||| |||||||||| |||||| |||||||||||| |||| ||||    
T  9693 ggcctatttagattgatttatttgagtttatctactaacataaatacttgtgagactgtttgggaga 9759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 347
Target Start/End: Original strand, 12641 - 12686
Alignment:
Q  302 gattaacttatttgagcttatctactagcataaacacttgtgagac 347  Q
    |||| |||||||||| |||||| |||||||||| ||||||||||||    
T  12641 gattgacttatttgaacttatccactagcataagcacttgtgagac 12686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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