View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19732_high_5 (Length: 211)
Name: NF19732_high_5
Description: NF19732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19732_high_5 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 25210223 - 25210402
Alignment:
| Q |
13 |
aagaatatgaaggaccacgttatgcaataaaatatataaagaataaagagcaccaccagacaaccaagagcacgttttctaacataagttttgtaaccaa |
112 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25210223 |
aagaaaatgaaggaccacgttatgcaataaaatatataaagaataaagagcaccaccaaacaaccaagagcacgttttctaacataagttttgtaaccaa |
25210322 |
T |
|
| Q |
113 |
ccatctaacccaaaaaataaagcatttactatttataatttattattataagcaagaaatgtgtctcacactcacattga |
192 |
Q |
| |
|
|||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25210323 |
ccatctaaccaaaaaaatatagcatttacaatttataatttattattataagcaagaaatgtgtctcacactcacattga |
25210402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University