View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19732_low_5 (Length: 378)
Name: NF19732_low_5
Description: NF19732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19732_low_5 |
 | |
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| [»] chr3 (39 HSPs) |
| |
|
| [»] scaffold0083 (1 HSPs) |
| |
|
| [»] scaffold0002 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 39)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 32 - 378
Target Start/End: Original strand, 10034879 - 10035225
Alignment:
| Q |
32 |
tgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggcagaaaac |
131 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||| | ||||| || |||| | ||||| |||||||| |
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|
| T |
10034879 |
tgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaaactctctgtttttggaattgtcatcaacttgagacattgccagaaaac |
10034978 |
T |
|
| Q |
132 |
tgcctcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgaggaactcacca |
231 |
Q |
| |
|
|||||||| ||||| || |||||||||||||| | | ||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||| || |
|
|
| T |
10034979 |
tgcctcccttcctcgctgaaatcacttagattgtgggattgtaaaaagcttgagtcattaccagaagacagcctcactgactctcttagggaactctgca |
10035078 |
T |
|
| Q |
232 |
tttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatgaagtcacaat |
331 |
Q |
| |
|
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
10035079 |
tttggaattgcccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatgaagtcacaat |
10035178 |
T |
|
| Q |
332 |
atgatagacaagttgtgttcccatttcaggtatgttccacagttcct |
378 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10035179 |
atgatagacaagttgtgttcccatttcaggtatgttccacagttcct |
10035225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 25 - 378
Target Start/End: Original strand, 9841727 - 9842080
Alignment:
| Q |
25 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggc |
124 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| | |||||||||||||| ||||||| | |
|
|
| T |
9841727 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaatatctcgatttttcgttttgtccacagcttgagtcattgcc |
9841826 |
T |
|
| Q |
125 |
agaaaactgcctcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgaggaa |
224 |
Q |
| |
|
||||||||||||||| ||||| || |||||||||| ||| || | ||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9841827 |
agaaaactgcctcccttcctcgctgaaatcacttatattgtttcaatgtgaaaagcttgagtcattaccagaagacagcctccctgactctcttgagcgt |
9841926 |
T |
|
| Q |
225 |
ctcaccatttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatgaag |
324 |
Q |
| |
|
|| | ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| || ||| |
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|
| T |
9841927 |
ctgaacatttggggatgtccattgttagaagaaaggtataaaaggaaggaacattgctccaaaattgctcacatccctgtcatatggataaaccaccaag |
9842026 |
T |
|
| Q |
325 |
tcacaatatgatagacaagttgtgttcccatttcaggtatgttccacagttcct |
378 |
Q |
| |
|
||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
9842027 |
tcagaatatgatagacaagttgtgttcccgtttcaggtatgttccacagttcct |
9842080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 13 - 352
Target Start/End: Complemental strand, 10431253 - 10430914
Alignment:
| Q |
13 |
tatatatcaattatctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagct |
112 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||| ||||| | |||| || || |
|
|
| T |
10431253 |
tatatatcactgatctctctgaaatgaagtcctttgatggaaatgggctgcgacacctctcctctctccaaactctctgtttttggttttgtgatcaact |
10431154 |
T |
|
| Q |
113 |
tgggtcattggcagaaaactgcctcccctcctccctcaaatcacttagatttttg-aattgtgaaagacttgagtcattaccagaagacagcctccctga |
211 |
Q |
| |
|
|| | ||||| |||||||||||||||| ||||| || ||||||||| ||||| || || ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10431153 |
tgagacattgccagaaaactgcctcccttcctcgctgaaatcactt-gatttgtggaaatgtgaaaagcttgagtcattaccagaagacagcctccctga |
10431055 |
T |
|
| Q |
212 |
ctctcttgaggaactcaccatttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagat |
311 |
Q |
| |
|
||||||| || |||| | ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10431054 |
ctctcttaagcaactgagaattagggaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctgtcatagat |
10430955 |
T |
|
| Q |
312 |
ataaatcatgaagtcacaatatgatagacaagttgtgttcc |
352 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10430954 |
ataaatgatgaagtcacaatatgatagacaagttgtgttcc |
10430914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 25 - 378
Target Start/End: Original strand, 9980335 - 9980688
Alignment:
| Q |
25 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggc |
124 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||| |||| | ||||| | |
|
|
| T |
9980335 |
atctctctgaaatgaagtcctttgatggaaatgggctgcgacacctctcctctctccaaagtctctgttttttgttttgtcaacaacttgagacattgcc |
9980434 |
T |
|
| Q |
125 |
agaaaactgcctcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgaggaa |
224 |
Q |
| |
|
||||||||||||||| ||||| || ||||||||| ||||| ||||| ||| || ||||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
9980435 |
agaaaactgcctcccttcctcgctgaaatcacttgaattttatgattgtaaaaagctagagtcattaccagaagacagcctccctgaatctcttaaggaa |
9980534 |
T |
|
| Q |
225 |
ctcaccatttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatgaag |
324 |
Q |
| |
|
|| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | ||| |
|
|
| T |
9980535 |
ctgtacatcgatggttgcccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctgtcatatcaataaattacaaag |
9980634 |
T |
|
| Q |
325 |
tcacaatatgatagacaagttgtgttcccatttcaggtatgttccacagttcct |
378 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9980635 |
tcacaatatgatagacaagttgtgttcccatttcaggtatgttccacagttcct |
9980688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 25 - 378
Target Start/End: Original strand, 10520354 - 10520707
Alignment:
| Q |
25 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggc |
124 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| || |||| ||||| || |||| ||| |||| | ||||| | |
|
|
| T |
10520354 |
atctctctgaaatgaagtcctttgatggaaaagggcttcgtcacctctcctctctccaacgtctccgtttttgggattgtgaacaacttgagacattgcc |
10520453 |
T |
|
| Q |
125 |
agaaaactgcctcccctcctccctcaaatcacttagatttttg-aattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgagga |
223 |
Q |
| |
|
||||||||||||||| ||||| || |||| |||| ||||| || || ||||||| ||| | |||||||||||||||||||||||||||||||| || |
|
|
| T |
10520454 |
agaaaactgcctcccttcctcgctgaaattactt-gatttgtggaaatgtgaaaagcttaaatcattaccagaagacagcctccctgactctctgaagag |
10520552 |
T |
|
| Q |
224 |
actcaccatttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatgaa |
323 |
Q |
| |
|
||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | || |
|
|
| T |
10520553 |
actgctcatttgggaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatcccagtcatatcaataaattaccaa |
10520652 |
T |
|
| Q |
324 |
gtcacaatatgatagacaagttgtgttcccatttcaggtatgttccacagttcct |
378 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10520653 |
gtcacaatatgatagacaagttgtgttcccatttcaggtatgttccacagttcct |
10520707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 25 - 378
Target Start/End: Original strand, 10263570 - 10263923
Alignment:
| Q |
25 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggc |
124 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||| |||||| ||||| || |||| | ||||| | |
|
|
| T |
10263570 |
atctctctgaaatgaagtcctttgatggaaatgggcttcaacacctctcctctctccaatatctctgttttttcttttgtcatcaacttgagacattgcc |
10263669 |
T |
|
| Q |
125 |
agaaaactgcctcccctcctccctcaaatcacttagattt-ttgaattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgagga |
223 |
Q |
| |
|
||||||||||||||| ||||| || ||||||||| ||| ||| || |||||| || ||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
10263670 |
agaaaactgcctcccttcctcgctgaaatcacttctattgcttggat-gtgaaaagctagagtcattaccagaagacagcctcccttcctctcttaaact |
10263768 |
T |
|
| Q |
224 |
actcaccatttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatgaa |
323 |
Q |
| |
|
|||| | || | || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
10263769 |
actcgctatcgagttttgcccattgttagaagaaaggtataaaaggaaggaacattagtccaaaattgctcacatccctttcataagaataaatgatgaa |
10263868 |
T |
|
| Q |
324 |
gtcacaatatgatagacaagttgtgttcccatttcaggtatgttccacagttcct |
378 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10263869 |
gtcacaatatgatagacaagttgtgttcccatttcaggtatgttccacagttcct |
10263923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 25 - 367
Target Start/End: Complemental strand, 10361001 - 10360658
Alignment:
| Q |
25 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctc-tattttttgggttgtccacagcttgggtcattgg |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| | |||| |||||||| |||||| |
|
|
| T |
10361001 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacatctcgtatttttt-gaatgtcgacagcttgagtcattac |
10360903 |
T |
|
| Q |
124 |
cagaaaactgcctcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgagga |
223 |
Q |
| |
|
|||||||||||||||| ||||| || |||||||||| ||||| |||||||| ||| | ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
10360902 |
cagaaaactgcctcccttcctcgctgaaatcacttacattttatggttgtgaaaagcttaaatcattaccagaagacagcctccctgactctcttaagga |
10360803 |
T |
|
| Q |
224 |
actcaccatttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatgaa |
323 |
Q |
| |
|
||| ||| | | || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | ||||| | || |
|
|
| T |
10360802 |
actggacatctatgattgcccattgttagaagaaaggtataaaaggaaggaacattgctccaaaattgctcacatccccgtcataaaaataaacgaccaa |
10360703 |
T |
|
| Q |
324 |
gtcacaatatgatagacaagttgtgttccc-atttcaggtatgtt |
367 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
10360702 |
gtcacaatatgatagacaagttgtgttcccgttttcaggtatgtt |
10360658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 25 - 353
Target Start/End: Original strand, 11772103 - 11772430
Alignment:
| Q |
25 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggc |
124 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||| | ||||| |||||| | ||||||| | |
|
|
| T |
11772103 |
atctctatgaaatgaagtcttttgatggaaatgggcttcgacacctctcctctctccaatatctctatttttggaattgtcaacagctcgagtcattgcc |
11772202 |
T |
|
| Q |
125 |
agaaaactgcctcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgaggaa |
224 |
Q |
| |
|
||||||||||||||| ||||| | ||||||||| |||| | ||||| |||||||||||||| |||||||||||||| ||||||||| || || |
|
|
| T |
11772203 |
agaaaactgcctcccttcctcgttgaaatcactttcatttcaaatgtgtgaggagcttgagtcattaccggaagacagcctccccgactctcttaagcaa |
11772302 |
T |
|
| Q |
225 |
ctcaccatttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatgaag |
324 |
Q |
| |
|
|| ||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||| | ||| |
|
|
| T |
11772303 |
ctgaccatttggggatgcccattgttagaagaaaggtataaaaggaaagaacattggtccaaaatcgctcacatccctgtcatagatataaatgaaaaag |
11772402 |
T |
|
| Q |
325 |
tcacaatatgatagacaagttgtgttccc |
353 |
Q |
| |
|
||||||||||| | ||||| ||||||||| |
|
|
| T |
11772403 |
tcacaatatgaga-acaagctgtgttccc |
11772430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 25 - 353
Target Start/End: Complemental strand, 11779182 - 11778855
Alignment:
| Q |
25 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggc |
124 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||| |||||| | ||||||| | |
|
|
| T |
11779182 |
atctctatgaaatgaagtccttcgatggaaatgggcttcgacacctctcctctctcgaatatctctatttttggaattgtcaacagctcgagtcattgcc |
11779083 |
T |
|
| Q |
125 |
agaaaactgcctcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgaggaa |
224 |
Q |
| |
|
||||||||||||||| ||||| | ||||||||| |||| | ||||| |||||||||||||| |||||||||||||| ||||||||| || || |
|
|
| T |
11779082 |
agaaaactgcctcccttcctcgttgaaatcactttcatttcaaatgtgtgaggagcttgagtcattaccggaagacagcctccccgactctcttaagcaa |
11778983 |
T |
|
| Q |
225 |
ctcaccatttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatgaag |
324 |
Q |
| |
|
|| ||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||| |||||| | ||| |
|
|
| T |
11778982 |
ctgaccatttggggatgcccattgttagaagaaaggtataaaaggaaagaacattggtccaaaatcgctcacatccctgtcatagaaataaatgaaaaag |
11778883 |
T |
|
| Q |
325 |
tcacaatatgatagacaagttgtgttccc |
353 |
Q |
| |
|
||||||||||| | ||||| ||||||||| |
|
|
| T |
11778882 |
tcacaatatgaga-acaagctgtgttccc |
11778855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 32 - 365
Target Start/End: Original strand, 10129798 - 10130125
Alignment:
| Q |
32 |
tgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggcagaaaac |
131 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||| |||| | ||||| || |||| | ||||| |||||||| |
|
|
| T |
10129798 |
tgaaatgaagtcctttgatggaaatgggcttcgacacctcttctctctccaacatctcttcttttggaattgtcatcaacttgagacattgccagaaaac |
10129897 |
T |
|
| Q |
132 |
tgcctcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgaggaactcacca |
231 |
Q |
| |
|
|||||||| ||||| || ||||||||| |||| | ||||||||| || ||||||||||||||||||||||||||||| |||||| | |||| || |
|
|
| T |
10129898 |
tgcctcccttcctcgctgaaatcacttgacttttgggattgtgaaaagctagagtcattaccagaagacagcctccctgattctcttatgcaactgtgca |
10129997 |
T |
|
| Q |
232 |
tttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatgaagtcacaat |
331 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| | ||| |||||| |
|
|
| T |
10129998 |
ttcaaggatgtccattgttagaagaaaggtataaaaggaaggaacattgctccaaaattgctcacatccctttcaaaaatatca------aaggcacaat |
10130091 |
T |
|
| Q |
332 |
atgatagacaagttgtgttcccatttcaggtatg |
365 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
10130092 |
atgatagacaagttgtgttcccatttcaggtatg |
10130125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 109 - 378
Target Start/End: Original strand, 9852830 - 9853099
Alignment:
| Q |
109 |
agcttgggtcattggcagaaaactgcctcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccc |
208 |
Q |
| |
|
|||||| |||||| |||||||||||||||| || || || ||||||||| ||| | ||| ||||||| || |||||||||||||||||||||||||| |
|
|
| T |
9852830 |
agcttgagtcattaccagaaaactgcctcccatcatcgctgaaatcacttgaattgtggaaatgtgaaaagctagagtcattaccagaagacagcctccc |
9852929 |
T |
|
| Q |
209 |
tgactctcttgaggaactcaccatttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcata |
308 |
Q |
| |
|
|||||| || || ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
9852930 |
tgactcactgaagagactggacatttatggatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctgtcata |
9853029 |
T |
|
| Q |
309 |
gatataaatcatgaagtcacaatatgatagacaagttgtgttcccatttcaggtatgttccacagttcct |
378 |
Q |
| |
|
|| |||||| | | || |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9853030 |
gaaataaatgaccaggttacaatatgatagacaagttgtgttcccatttcaggtatgttccacagttcct |
9853099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 109 - 378
Target Start/End: Original strand, 10583535 - 10583805
Alignment:
| Q |
109 |
agcttgggtcattggcagaaaactgcctcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccc |
208 |
Q |
| |
|
||||||||||||| ||||| || ||||||| ||||| || ||||||||| |||| || ||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
10583535 |
agcttgggtcattaccagaagacagcctcccttcctcgctgaaatcacttcaatttgtgggttgtgtaagactcgagtcattaccagaagacagcctccc |
10583634 |
T |
|
| Q |
209 |
tgactctcttgaggaactcaccatttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcata |
308 |
Q |
| |
|
||||||||||||| ||| ||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
10583635 |
tgactctcttgagcgactgaccatccaattttgcccattgttagaagaaaggtataaaaggaatgaatattggtccaaaattgctcacatccctgtcata |
10583734 |
T |
|
| Q |
309 |
gatataaatcatgaagtcacaatatgatagacaagttgtgttccc-atttcaggtatgttccacagttcct |
378 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
10583735 |
caaataaatcacaaagtcacaatatgatagacaagttgtgttcccgttttcaggtatgttccacatttcct |
10583805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 124 - 363
Target Start/End: Original strand, 10666503 - 10666742
Alignment:
| Q |
124 |
cagaaaactgcctcccctcctccctcaaatcacttagatt-tttgaattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgagg |
222 |
Q |
| |
|
||||| || ||||||| ||||| || ||||||||| ||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
10666503 |
cagaagacagcctcccttcctcgctgaaatcacttgaattgtttgaat-gtgaaaagcttgagtcattaccagaagacagcctccctgactctcttaagg |
10666601 |
T |
|
| Q |
223 |
aactcaccatttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatga |
322 |
Q |
| |
|
|||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | | |
|
|
| T |
10666602 |
aactgcacattgaggaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctgtcatatcaataaattacaa |
10666701 |
T |
|
| Q |
323 |
agtcacaatatgatagacaagttgtgttcccatttcaggta |
363 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
10666702 |
agtcacaatatgatagacgagttgtgttcctgtttcaggta |
10666742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 25 - 365
Target Start/End: Original strand, 10531650 - 10531989
Alignment:
| Q |
25 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggc |
124 |
Q |
| |
|
||||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||| ||||||| | ||| | ||| |||||| ||||||| | |
|
|
| T |
10531650 |
atctctctgaaataaagtcatttgaaggaaatggacttcgacacctctcctctctcaaaaatcttcactttcttaattgcttggagcttgagtcattgcc |
10531749 |
T |
|
| Q |
125 |
agaaaactgcctcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgaggaa |
224 |
Q |
| |
|
|||||| |||||||| ||||| || || |||||| ||||| || ||||| |||||||||||||||||||||||||||||||||| ||||||| | | |
|
|
| T |
10531750 |
agaaaattgcctcccttcctcgctgaagtcacttcaattttcgagttgtgtaagacttgagtcattaccagaagacagcctcccttcctctcttaaacta |
10531849 |
T |
|
| Q |
225 |
ctcaccatttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatgaag |
324 |
Q |
| |
|
||||| || | || ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| ||||| | ||| |
|
|
| T |
10531850 |
ctcactatcgagttttgcccattgttagaagaaaggtataaaaggaaggaaaattggtccaaaatttctcacatccctgtcataataataaacaagcaag |
10531949 |
T |
|
| Q |
325 |
tcacaatatgatagacaagttgtgttcccatttcaggtatg |
365 |
Q |
| |
|
| ||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
10531950 |
ttacaatatga-agacaagttgtgttcccgtttcaggtatg |
10531989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 25 - 363
Target Start/End: Original strand, 10680448 - 10680785
Alignment:
| Q |
25 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggc |
124 |
Q |
| |
|
||||||||||||| ||||| |||| |||||||| ||||||||||||||||||||| ||||||| | ||| | ||| | |||||| |||||| | |
|
|
| T |
10680448 |
atctctctgaaataaagtcacttgaaggaaatggacttcgacacctctcctctctcaaaaatcttaactttcttaattgctcggagcttgagtcatttcc |
10680547 |
T |
|
| Q |
125 |
agaaaactgcctcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgaggaa |
224 |
Q |
| |
|
|||||| |||||||| ||||| || ||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||| ||||||| | | |
|
|
| T |
10680548 |
agaaaattgcctcccttcctcgctgaaatcacttcaatttttgagttgtgtaagacttgagttgttaccagaagacagcctcccttcctctcttaaacta |
10680647 |
T |
|
| Q |
225 |
ctcaccatttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatgaag |
324 |
Q |
| |
|
||||| || | || ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||| ||||| | ||| |
|
|
| T |
10680648 |
ctcactatcaagttttgcccattgttagaagaaaggtataaaaggaatgaacatcggtccaaaatttctcacatccctgtcataataataaacaagcaag |
10680747 |
T |
|
| Q |
325 |
tcacaatatgatagacaagttgtgttcccatttcaggta |
363 |
Q |
| |
|
||||||||||| | ||||||||||| || ||||||||| |
|
|
| T |
10680748 |
tcacaatatga-ggtcaagttgtgtttccgtttcaggta |
10680785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 25 - 209
Target Start/End: Original strand, 10583382 - 10583566
Alignment:
| Q |
25 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggc |
124 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||| |||||| ||||| || |||| | ||||| | |
|
|
| T |
10583382 |
atctctctgaaatgaagtcctttgatggaaatgggctgcgacacctctcctctctccaatatctctgttttttcatttgtcatcaacttgagacattgcc |
10583481 |
T |
|
| Q |
125 |
agaaaactgcctcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccct |
209 |
Q |
| |
|
||||||||||||||| ||||| || ||||||||| |||| || ||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
10583482 |
agaaaactgcctcccttcctcactgaaatcactttcatttatggattgtgaaaagcttgggtcattaccagaagacagcctccct |
10583566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 26 - 164
Target Start/End: Original strand, 9852609 - 9852747
Alignment:
| Q |
26 |
tctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggca |
125 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||| |||||||| |||||||||||||||| || |
|
|
| T |
9852609 |
tctctctgaaatgaagtcctttgatggaaatgggcttcgacacctcttctctctccaatatctctattttgcgggttgtcaacagcttgggtcattgcca |
9852708 |
T |
|
| Q |
126 |
gaaaactgcctcccctcctccctcaaatcacttagattt |
164 |
Q |
| |
|
||||||||| |||| ||||| || |||||||||| |||| |
|
|
| T |
9852709 |
gaaaactgcttcccttcctcactgaaatcacttaaattt |
9852747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 162 - 367
Target Start/End: Complemental strand, 10372974 - 10372768
Alignment:
| Q |
162 |
tttttgaattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgaggaactcaccatttggaaatgtccattgttagaagaaaggt |
261 |
Q |
| |
|
||||| |||||||||| |||||||||||||||||||||||||||||| |||||| || ||| |||| | ||| ||||||||||||||||||| |
|
|
| T |
10372974 |
ttttttaattgtgaaaagcttgagtcattaccagaagacagcctcccttcctctctgaagagactggtcattatgggatgcccattgttagaagaaaggt |
10372875 |
T |
|
| Q |
262 |
ataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatgaagtcacaatatgatagacaagttgtgttccc-atttcag |
360 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| | ||||| | || ||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10372874 |
ataaaaggaaggaacattggtccaaaattgctcacatccccgtcataaaaataaacgaccaaatcacaatatgatagacaagttgtgttcccgttttcag |
10372775 |
T |
|
| Q |
361 |
gtatgtt |
367 |
Q |
| |
|
||||||| |
|
|
| T |
10372774 |
gtatgtt |
10372768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 10373050 - 10372970
Alignment:
| Q |
17 |
tatcaattatctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctatttttt |
97 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
10373050 |
tatcaattatctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcaaaaatctctatttttt |
10372970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 10503439 - 10503584
Alignment:
| Q |
13 |
tatatatcaattatctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagct |
112 |
Q |
| |
|
||||||||| | |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||| | ||||| |||||| |
|
|
| T |
10503439 |
tatatatcagtgatctctatgaaatgaagtcctttgatggaaatgggcttcgacaaatctcctctctcgaaaatcttgaatttcttaattgtctacagct |
10503538 |
T |
|
| Q |
113 |
tgggtcattggcagaaaactgcctcccctcctccctcaaatcactt |
158 |
Q |
| |
|
|| ||||||| |||||||||||||||| ||||| || |||| |||| |
|
|
| T |
10503539 |
tgagtcattgccagaaaactgcctcccttcctcgctgaaattactt |
10503584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 151 - 363
Target Start/End: Original strand, 10503646 - 10503857
Alignment:
| Q |
151 |
aatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgaggaactcaccatttggaaatgtccattgtt |
250 |
Q |
| |
|
||||||||||||||| |||||||| ||| | |||||||||||||||||||| ||||| |||||| || ||| | |||| | ||| ||| || |
|
|
| T |
10503646 |
aatcacttagattttatggttgtgaaaagctttactcattaccagaagacagccttcctgattctcttaagctactgatcattcaaagatgcccaacatt |
10503745 |
T |
|
| Q |
251 |
agaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatgaagtcacaatatgatagacaagttgtgtt |
350 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| || |||||||||||||| |||| | |||||| |
|
|
| T |
10503746 |
agaagaaaggtataaaaggaaggaacattggtccaaaatttctcacatccctgtcatagaaatagatggacaagtcacaatatga-ggacaggctgtgtt |
10503844 |
T |
|
| Q |
351 |
cccatttcaggta |
363 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
10503845 |
cccgtttcaggta |
10503857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 307
Target Start/End: Original strand, 10091948 - 10092146
Alignment:
| Q |
109 |
agcttgggtcattggcagaaaactgcctcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccc |
208 |
Q |
| |
|
|||||| |||||| |||| ||||||||||| ||||| || |||||||||||||| ||||| ||| ||||| ||||||||||||||||||||||| |
|
|
| T |
10091948 |
agcttgagtcatttccagacaactgcctcccgtcctcgctgaaatcacttagattgagtgattgtaaaatgcttgattcattaccagaagacagcctccc |
10092047 |
T |
|
| Q |
209 |
tgactctcttgaggaactcaccatttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcat |
307 |
Q |
| |
|
| |||||| || |||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
10092048 |
ttcatctcttatcactctgtacattatgggatgcccattgttagaagaaaggtataaaaggaaggaacattggtccaaaatttctcacatccctgtcat |
10092146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 307
Target Start/End: Original strand, 10198830 - 10199028
Alignment:
| Q |
109 |
agcttgggtcattggcagaaaactgcctcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccc |
208 |
Q |
| |
|
|||||| |||||| |||| ||||||||||| ||||| || |||||||||||||| ||||| ||| ||||| ||||||||||||||||||||||| |
|
|
| T |
10198830 |
agcttgagtcatttccagacaactgcctcccgtcctcgctgaaatcacttagattgagtgattgtaaaatgcttgattcattaccagaagacagcctccc |
10198929 |
T |
|
| Q |
209 |
tgactctcttgaggaactcaccatttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcat |
307 |
Q |
| |
|
| |||||| || |||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
10198930 |
ttcatctcttatcactctgtacattatgggatgcccattgttagaagaaaggtataaaaggaaggaacattggtccaaaatttctcacatccctgtcat |
10199028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 10091668 - 10091805
Alignment:
| Q |
36 |
atgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggcagaaaactgcc |
135 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| || |||| |||| | |||| ||||||| ||||||| |||||||||||| |
|
|
| T |
10091668 |
atgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacgtctcgatttctgtcaatgtcgacagcttcagtcattgccagaaaactgcc |
10091767 |
T |
|
| Q |
136 |
tcccctcctccctcaaatcacttagatttttgaattgt |
173 |
Q |
| |
|
|||| ||||| || ||| ||||| ||||| || ||||| |
|
|
| T |
10091768 |
tcccttcctcgctgaaaacacttcgatttgtggattgt |
10091805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 10198550 - 10198687
Alignment:
| Q |
36 |
atgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggcagaaaactgcc |
135 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| || |||| |||| | |||| ||||||| ||||||| |||||||||||| |
|
|
| T |
10198550 |
atgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacgtctcgatttctgtcaatgtcgacagcttcagtcattgccagaaaactgcc |
10198649 |
T |
|
| Q |
136 |
tcccctcctccctcaaatcacttagatttttgaattgt |
173 |
Q |
| |
|
|||| ||||| || ||| ||||| ||||| || ||||| |
|
|
| T |
10198650 |
tcccttcctcgctgaaaacacttcgatttgtggattgt |
10198687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 335
Target Start/End: Original strand, 10086056 - 10086354
Alignment:
| Q |
36 |
atgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggcagaaaactgcc |
135 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| |||||||| ||| | ||| ||||| ||| |||| | |||| | ||||| ||| |
|
|
| T |
10086056 |
atgaagtcctttgatggaaatgggcttcaacacctctcctttctcgaaa-tcttcactttcgtaattgtcaacaacttgagccatttcctgaaaattgcg |
10086154 |
T |
|
| Q |
136 |
tcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgaggaactcaccatttg |
235 |
Q |
| |
|
| || ||||| || ||||||||| | ||| || ||||||||||||||| |||||||| |||||| |||||||||| ||||| || || | ||| | |
|
|
| T |
10086155 |
ttccttcctcgctgaaatcacttgaaatttggagttgtgaaagacttgaatcattaccggaagactgcctccctgattctctgaagcgtctgagcatc-g |
10086253 |
T |
|
| Q |
236 |
gaaatgtccatt-gttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatgaagtcacaatatg |
334 |
Q |
| |
|
| | ||| || |||| |||||||||||||||||||||||||||||||||||||| ||| ||| ||| ||||| | |||||| ||| |||||||||| |
|
|
| T |
10086254 |
tatttttccctttgttaaaagaaaggtataaaaggaaggaacattggtccaaaatttctctcattcctgtcataaaaataaatggcgaaatcacaatatg |
10086353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 335
Target Start/End: Original strand, 10192976 - 10193274
Alignment:
| Q |
36 |
atgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggcagaaaactgcc |
135 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| |||||||| ||| | ||| ||||| ||| |||| | |||| | ||||| ||| |
|
|
| T |
10192976 |
atgaagtcctttgatggaaatgggcttcaacacctctcctttctcgaaa-tcttcactttcgtaattgtcaacaacttgagccatttcctgaaaattgcg |
10193074 |
T |
|
| Q |
136 |
tcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgaggaactcaccatttg |
235 |
Q |
| |
|
| || ||||| || ||||||||| | ||| || ||||||||||||||| |||||||| |||||| |||||||||| ||||| || || | ||| | |
|
|
| T |
10193075 |
ttccttcctcgctgaaatcacttgaaatttggagttgtgaaagacttgaatcattaccggaagactgcctccctgattctctgaagcgtctaagcatc-g |
10193173 |
T |
|
| Q |
236 |
gaaatgtccatt-gttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatgaagtcacaatatg |
334 |
Q |
| |
|
| | ||| || |||| |||||||||||||||||||||||||||||||||||||| ||| ||| ||| ||||| | |||||| ||| |||||||||| |
|
|
| T |
10193174 |
tatttttccctttgttaaaagaaaggtataaaaggaaggaacattggtccaaaatttctctcattcctgtcataaaaataaatggcgaaatcacaatatg |
10193273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 13852642 - 13852579
Alignment:
| Q |
26 |
tctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctc |
89 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||||||||| |||||||||||| | |||||| |
|
|
| T |
13852642 |
tctctctgaaatgaagtctttcgatggaaatgggcttcgacatctctcctctctcaacaatctc |
13852579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 10892187 - 10892246
Alignment:
| Q |
25 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaa |
84 |
Q |
| |
|
|||||||||||||||| | ||| | |||||||||||||||||||||||||||||| |||| |
|
|
| T |
10892187 |
atctctctgaaatgaaatgcttaggtggaaatgggcttcgacacctctcctctctggaaa |
10892246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 10666347 - 10666390
Alignment:
| Q |
37 |
tgaagtcctttgatggaaatgggcttcgacacctctcctctctc |
80 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
10666347 |
tgaagtcctttaatggaaatgggcttctacacctctcctctctc |
10666390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 11128217 - 11128158
Alignment:
| Q |
25 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaa |
84 |
Q |
| |
|
||||||||||| |||| | ||| | |||||||||||||||||||||||||||||| |||| |
|
|
| T |
11128217 |
atctctctgaagtgaaatgcttaggtggaaatgggcttcgacacctctcctctcttgaaa |
11128158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 11242551 - 11242500
Alignment:
| Q |
247 |
tgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacat |
298 |
Q |
| |
|
||||||||||||||||| ||| | ||||||||||||||||||| |||||||| |
|
|
| T |
11242551 |
tgttagaagaaaggtatcaaaagcaggaacattggtccaaaatagctcacat |
11242500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 11157206 - 11157149
Alignment:
| Q |
27 |
ctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaa |
84 |
Q |
| |
|
||||||||| |||| | ||| | |||||||||||||||||||||||||||||| |||| |
|
|
| T |
11157206 |
ctctctgaagtgaaatgcttaggtggaaatgggcttcgacacctctcctctctggaaa |
11157149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 8864167 - 8864226
Alignment:
| Q |
25 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaa |
84 |
Q |
| |
|
||||||||||| ||| | ||| |||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
8864167 |
atctctctgaagcgaaatgcttagatggaaatgggcttcgatacctctcctctctggaaa |
8864226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 317
Target Start/End: Complemental strand, 8585578 - 8585532
Alignment:
| Q |
271 |
aggaacattggtccaaaattgctcacatccctttcatagatataaat |
317 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||| ||||| |||||||| |
|
|
| T |
8585578 |
aggaacattggtccaacattgctcacatacctgtcataaatataaat |
8585532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 12131117 - 12131167
Alignment:
| Q |
23 |
ttatctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctc |
73 |
Q |
| |
|
|||||||||||||||||| || ||||| |||||||||||||| ||||||| |
|
|
| T |
12131117 |
ttatctctctgaaatgaaatcatttgaaagaaatgggcttcgaaacctctc |
12131167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 13163852 - 13163906
Alignment:
| Q |
25 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctct |
79 |
Q |
| |
|
|||||| |||||| || ||||||||||||||||| || |||||||| |||||||| |
|
|
| T |
13163852 |
atctctgtgaaataaaatcctttgatggaaatggactccgacacctatcctctct |
13163906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 10091894 - 10091966
Alignment:
| Q |
124 |
cagaaaactgcctcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccaga |
196 |
Q |
| |
|
|||||||||||||||| | || || ||||||||| ||||| ||||||||||| ||||||||||| ||||| |
|
|
| T |
10091894 |
cagaaaactgcctccctttgtcgctgaaatcacttcgatttgcgaattgtgaaaagcttgagtcatttccaga |
10091966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 10198776 - 10198848
Alignment:
| Q |
124 |
cagaaaactgcctcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccaga |
196 |
Q |
| |
|
|||||||||||||||| | || || ||||||||| ||||| ||||||||||| ||||||||||| ||||| |
|
|
| T |
10198776 |
cagaaaactgcctccctttgtcgctgaaatcacttcgatttgcgaattgtgaaaagcttgagtcatttccaga |
10198848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 182; Significance: 3e-98; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 25 - 378
Target Start/End: Complemental strand, 54802 - 54449
Alignment:
| Q |
25 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggc |
124 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||| |||| | ||||| | |
|
|
| T |
54802 |
atctctctgaaatgaagtcctttgatggaaatgggctgcgacacctctcctctctccaaagtctctgttttttgttttgtcaacaacttgagacattgcc |
54703 |
T |
|
| Q |
125 |
agaaaactgcctcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgaggaa |
224 |
Q |
| |
|
||||||||||||||| ||||| || ||||||||| ||||| ||||| ||| || ||||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
54702 |
agaaaactgcctcccttcctcgctgaaatcacttgaattttatgattgtaaaaagctagagtcattaccagaagacagcctccctgaatctcttaaggaa |
54603 |
T |
|
| Q |
225 |
ctcaccatttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatgaag |
324 |
Q |
| |
|
|| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | ||| |
|
|
| T |
54602 |
ctgtacatcgatggttgcccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctgtcatatcaataaattacaaag |
54503 |
T |
|
| Q |
325 |
tcacaatatgatagacaagttgtgttcccatttcaggtatgttccacagttcct |
378 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54502 |
tcacaatatgatagacaagttgtgttcccatttcaggtatgttccacagttcct |
54449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 25 - 333
Target Start/End: Original strand, 26909757 - 26910065
Alignment:
| Q |
25 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggc |
124 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| | ||| | |||| ||| || |||||| | |
|
|
| T |
26909757 |
atctctatgaaatgaagtcctttgatggaaatgggcttcgacgcctctcctctctccaaaatcttcactttattaattgtgaacaactcaagtcatttcc |
26909856 |
T |
|
| Q |
125 |
agaaaactgcctcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgaggaa |
224 |
Q |
| |
|
||||||||||||||| ||||| || |||| ||| ||||| ||||| | |||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
26909857 |
agaaaactgcctcccttcctcgctgaaatatcttcaattttatggctgtgagaaacttgagtcattaccagaagacagcctccccgactctcttgagatg |
26909956 |
T |
|
| Q |
225 |
ctcaccatttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatgaag |
324 |
Q |
| |
|
|| || | || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| | |||||||| ||| |
|
|
| T |
26909957 |
ctggaaatgtcatcttgcccattgttagaagaaaggtacaaaaggaaggaacattggtccaaaattgctcacatccctgtcatacaaataaatcaacaag |
26910056 |
T |
|
| Q |
325 |
tcacaatat |
333 |
Q |
| |
|
||| ||||| |
|
|
| T |
26910057 |
tcataatat |
26910065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 37 - 310
Target Start/End: Complemental strand, 17850111 - 17849838
Alignment:
| Q |
37 |
tgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggcagaaaactgcct |
136 |
Q |
| |
|
|||| ||||||||||||||||| |||||||| || |||||||| |||| ||| | ||| | |||| ||| |||| ||||||| || |||||||||| |
|
|
| T |
17850111 |
tgaactcctttgatggaaatggacttcgacatctttcctctcttgaaagtcttgactttcttaactgtcaacaacttgagtcattgccacaaaactgcct |
17850012 |
T |
|
| Q |
137 |
cccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgaggaactcaccatttgg |
236 |
Q |
| |
|
||| ||||| || ||||| ||| ||||| ||||| ||||||||||||| ||||||||||||||||||||| ||||||| || ||| ||||||| |
|
|
| T |
17850011 |
cccttcctcactgaaatcgcttgaattttgttattgtaaaagacttgagtcgttaccagaagacagcctcccttcctctcttaagcgactggtcatttgg |
17849912 |
T |
|
| Q |
237 |
aaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcataga |
310 |
Q |
| |
|
||| || | ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
17849911 |
cgatgccctatattagaagaaaggtataaaaggcaggaacattggtccaaaattgctcacatccctgtcataga |
17849838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 32 - 293
Target Start/End: Complemental strand, 44954853 - 44954592
Alignment:
| Q |
32 |
tgaaatgaagtcctttgatggaaatgggcttcgacacct-ctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggcagaaaa |
130 |
Q |
| |
|
|||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||||| | ||| |||| |||||||| |||||| ||||||| |
|
|
| T |
44954853 |
tgaaatgaagtcctttcaaggaaatgggcttcaacacctactcctctctcgaaaatctccactttcgtaactgtcaacagcttgagtcatttccagaaaa |
44954754 |
T |
|
| Q |
131 |
ctgcctcccctcctccctcaaatcacttagatttttgaattgtgaaagacttgagtcattaccagaagacagcctccctgactctcttgaggaactcacc |
230 |
Q |
| |
|
||| || || ||||| || ||||||||| ||||||| ||||||| |||||||||| ||||||||||| |||||||| |||||||| | ||| | |
|
|
| T |
44954753 |
ctgtcttccttcctcgctgaaatcacttcaatttttgttttgtgaa-gacttgagtcgttaccagaagaaagcctccccaactctcttaatcgactggtc |
44954655 |
T |
|
| Q |
231 |
atttggaaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgct |
293 |
Q |
| |
|
|||||| ||| || | | |||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
44954654 |
atttggcgatgccctgtatcagaagaaaggtatagaaggaaggaacattggtccaaaattgct |
44954592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 166
Target Start/End: Original strand, 11487907 - 11488039
Alignment:
| Q |
34 |
aaatgaagtcctttgatggaaatgggcttcgacacctctcctctctcgaaaatctctattttttgggttgtccacagcttgggtcattggcagaaaactg |
133 |
Q |
| |
|
|||||||| ||| |||||||| |||||||||| |||||||||||||| || |||| | |||| | || || ||| ||| |||||| ||||||||| |
|
|
| T |
11487907 |
aaatgaagccctatgatggaagtgggcttcgatacctctcctctctcaaagatctttcattttggtgtagtgaacactttgagtcattaccagaaaactt |
11488006 |
T |
|
| Q |
134 |
cctcccctcctccctcaaatcacttagattttt |
166 |
Q |
| |
|
|||||| ||||| || | |||||||| |||||| |
|
|
| T |
11488007 |
cctcccatcctcgctgatatcacttaaattttt |
11488039 |
T |
|
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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 143136 - 143082
Alignment:
| Q |
25 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctct |
79 |
Q |
| |
|
|||||| |||||| || ||||||||||||||||| || |||||||| |||||||| |
|
|
| T |
143136 |
atctctgtgaaataaaatcctttgatggaaatggactccgacacctatcctctct |
143082 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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