View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19736_high_12 (Length: 246)
Name: NF19736_high_12
Description: NF19736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19736_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 14408034 - 14408257
Alignment:
| Q |
1 |
aaaaactttcaacttgttagactttttcttcacacccttttccttcctctaatgcatgagttttgtttgtttgttctaacataataaaaaacaacatttt |
100 |
Q |
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| T |
14408034 |
aaaaactttcaacttgttagactttttcttcacacccttttccttcctctaatgcatgagttttgtttgtttgttctaacataataaaaaacaacatttt |
14408133 |
T |
|
| Q |
101 |
atcatatgggaagttcttgtacaaaacctgttgctcatgtctcttcatcaaacatttctggttagtttcttgtcatttcattaatctttctcttctttca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14408134 |
atcatatgggaagttcttgtacaaaacctgttgctcatgtctcttcatcaaacatttctggttagtttcttgtcatttcattaatctttctcttctttca |
14408233 |
T |
|
| Q |
201 |
tgccactataatttcaactttttg |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
14408234 |
tgccactataatttcaactttttg |
14408257 |
T |
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