View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19736_high_8 (Length: 359)
Name: NF19736_high_8
Description: NF19736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19736_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 10 - 344
Target Start/End: Original strand, 28201319 - 28201653
Alignment:
| Q |
10 |
aagaatatgagccaaaaattgtcatgataatgctaaaatgattagcatatgaaggccaacatagccaagctctgaaggataaatagtaacctaatatgcc |
109 |
Q |
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| T |
28201319 |
aagaaaatgagccaaaaattgtcatgataatgctaaaatgattagcatatgaaggccaacatatccaagctctgaaggataaatagtaacctaatatgcc |
28201418 |
T |
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| Q |
110 |
aaacaagcaaacttttgtggtcaaagggtgaacttggaatggggaaattgtgttattacctgcagtttgaacttgaaggaatcctaatagtgtgggaaat |
209 |
Q |
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| T |
28201419 |
aaacaagcaaacttttgtggtcaaagggtgaacttggaatggggaaattgtgttattacctgcagtttgaacttgaaggaatcctaatagtgtgggaaat |
28201518 |
T |
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| Q |
210 |
gtaaatgcatagattttatgccggtgggttgtgaaggaataatgagtttggttacatgcaatcgagataggagttgttatgttgaaggtttgctggtgga |
309 |
Q |
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| T |
28201519 |
gtaaatgcatagattttatgccggtgggttgtgaaggaataatgagtttggttacatgcaatcgagataggagttgttatgttgaaggtttgctggtgga |
28201618 |
T |
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| Q |
310 |
catagaaggtggctcgccattgatgagaggttggt |
344 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
28201619 |
catagaaggtggctcgccattgatgagaggttggt |
28201653 |
T |
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