View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19737_high_7 (Length: 347)
Name: NF19737_high_7
Description: NF19737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19737_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 17 - 335
Target Start/End: Complemental strand, 41062376 - 41062058
Alignment:
| Q |
17 |
aactaaaacaacattgataacggttccatggccttgaaggagcttgacatccaaaacagtacactagcaggcacaatacaaacaaataagaataaggtaa |
116 |
Q |
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| T |
41062376 |
aactaaaacaacattgatagcggttccatggccttgaaggagcttgacatccaaaacagtacactagcaggcacaatacaaacaaataagaataaggtaa |
41062277 |
T |
|
| Q |
117 |
tggtttaacatggaatgataattactaataaataataggtaacctgcaactgatccgtgtatgtaagttgattaagcatagttttctgggtccacttaat |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41062276 |
tggtttaacatggaatgataattactaataaataataggtaacctgcaactgatccgtgtatgtaagttgattaagcatagttttctgggtccacttaat |
41062177 |
T |
|
| Q |
217 |
caattctgatttgatatctgagagtccttcaccacttattgcagaagtaggcacaatgctgacagtttgtagtaggatatcattgttattaagaaacata |
316 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
41062176 |
caattctgatttgatatctgagagtccttcgccacttattgcagaagtaggcacaatgctgacagtttgtcgtaggatatcattgttattaagaaacata |
41062077 |
T |
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| Q |
317 |
tcagcttttaccccatatt |
335 |
Q |
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|||||||||| |||||||| |
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| T |
41062076 |
tcagcttttatcccatatt |
41062058 |
T |
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