View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19737_low_11 (Length: 249)
Name: NF19737_low_11
Description: NF19737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19737_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 30692918 - 30693143
Alignment:
| Q |
6 |
aggagcacagacatagagaacataacaacatgcatcaatcaaaaagcaattagagcgttaagaaatgttgtgcatataaaacaacacaaaatttaattaa |
105 |
Q |
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| T |
30692918 |
aggaacacacacatagagaacataacaacatgcatcaatcaaaaagcaattagagcgttaagaaatgttgtgcatataaaacaacacaaaatttaattaa |
30693017 |
T |
|
| Q |
106 |
tatttactaattctattatcaccagaaagacaaattgaattgaagcttgtgaagtaagaaacgaaccatgtagaaagaatttgtaggtgaaaaagtagtc |
205 |
Q |
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| T |
30693018 |
tatttactaattctattatcaccagaaagacaaatcgaattgaagcttgtgacgtaagaaacgaatcatgtagaaataatttgtaggtgaaaaagtagtc |
30693117 |
T |
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| Q |
206 |
gtgtgtaacaggaaacggacagagtg |
231 |
Q |
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|||||||||||||||| ||||||||| |
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| T |
30693118 |
gtgtgtaacaggaaacagacagagtg |
30693143 |
T |
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