View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19738_low_18 (Length: 238)
Name: NF19738_low_18
Description: NF19738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19738_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 26878459 - 26878661
Alignment:
| Q |
18 |
atttgttttgaaatcaacaagcgtatttgtatattttgatgtcttaggtgacataatttcattattaccaacaagttatacgtttatcatgttttaagta |
117 |
Q |
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| T |
26878459 |
atttgttttgaaatcaacaagcgtatttgtaaattttgatgtcttaggtgacataatttcattattaccaacaagttatacgtttgtt---ttttaccta |
26878555 |
T |
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| Q |
118 |
acgtgttttaactatgatgctatagcctataggtgacacaatttcaccatcacaaaaatattacaaatgtaatggcataatcaactactttattatgtga |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26878556 |
acgtgttttaactatgatgctatagcctataggtgacacaatttcaccatcacaaaaatattacaaatgtaatggcataatcaactactttattatgtga |
26878655 |
T |
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| Q |
218 |
attcat |
223 |
Q |
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|||||| |
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| T |
26878656 |
attcat |
26878661 |
T |
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