View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1973_high_3 (Length: 361)
Name: NF1973_high_3
Description: NF1973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1973_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 16 - 333
Target Start/End: Complemental strand, 30988923 - 30988606
Alignment:
| Q |
16 |
atagtccaatcattcaacttcatttctgattttgcctccttcttccagttaaagtttgaaatgaatatgaagttttctgctaaatattggcatcagctaa |
115 |
Q |
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| T |
30988923 |
atagtccaatcattcaacttcatttctgattttgcctccttcttccagttaaagtttgaaatgaatatgaagttttctgctaaatattggcatcagctaa |
30988824 |
T |
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| Q |
116 |
tcaaactttaggtatattaatctttttgagtaaagtcatattcttattcacatgatgttaattgttataataatgagaagcactttactgctttattctt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30988823 |
tcaaactttaggtatattaatctttttgagtaaagtcatattcttattcacatgctgttaattgttataataatgagaagcactttactgctttattctt |
30988724 |
T |
|
| Q |
216 |
tccctggttggttttgagtatgatatgtgttttgcatctgtgttctctgttcatgttattatcttccaaatatagagagaaaaataaggttactgtaaaa |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30988723 |
tccctggttggttttgagtatgatatgtgttttgcatctgtgttctctgttcatgttattatcttccaaatatagagagaaaaataaggttactgtaaaa |
30988624 |
T |
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| Q |
316 |
ataggccatgaaaaaatt |
333 |
Q |
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|||||||||||||||||| |
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| T |
30988623 |
ataggccatgaaaaaatt |
30988606 |
T |
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