View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19742_high_28 (Length: 254)

Name: NF19742_high_28
Description: NF19742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19742_high_28
NF19742_high_28
[»] chr5 (36 HSPs)
chr5 (139-203)||(11438333-11438397)
chr5 (143-254)||(15061772-15061882)
chr5 (144-254)||(15060162-15060272)
chr5 (144-254)||(15616448-15616558)
chr5 (142-254)||(41064141-41064253)
chr5 (145-254)||(21776855-21776964)
chr5 (145-202)||(37274748-37274805)
chr5 (145-254)||(30796579-30796687)
chr5 (143-254)||(11957597-11957708)
chr5 (144-254)||(11956138-11956248)
chr5 (143-254)||(15615101-15615211)
chr5 (144-202)||(40434405-40434463)
chr5 (146-203)||(28819537-28819594)
chr5 (137-177)||(22551514-22551554)
chr5 (140-203)||(35599307-35599371)
chr5 (144-203)||(9751675-9751734)
chr5 (144-203)||(38482317-38482376)
chr5 (145-203)||(12399585-12399643)
chr5 (144-254)||(41065605-41065715)
chr5 (146-203)||(10011619-10011676)
chr5 (139-192)||(10012816-10012869)
chr5 (146-203)||(13948581-13948638)
chr5 (144-203)||(4060458-4060517)
chr5 (134-177)||(10976772-10976815)
chr5 (139-202)||(11890099-11890161)
chr5 (142-254)||(30798527-30798638)
chr5 (139-177)||(33052811-33052849)
chr5 (142-191)||(889065-889114)
chr5 (146-203)||(5802416-5802473)
chr5 (143-203)||(9750445-9750506)
chr5 (141-190)||(15395540-15395589)
chr5 (144-177)||(29104443-29104476)
chr5 (145-193)||(29520136-29520182)
chr5 (141-193)||(11439806-11439858)
chr5 (144-203)||(19601265-19601325)
chr5 (143-203)||(26888456-26888516)
[»] chr1 (50 HSPs)
chr1 (144-254)||(14625369-14625478)
chr1 (136-203)||(26097026-26097093)
chr1 (140-203)||(43635830-43635893)
chr1 (144-254)||(9441566-9441676)
chr1 (144-193)||(13903380-13903429)
chr1 (147-203)||(1825296-1825352)
chr1 (143-203)||(26095812-26095872)
chr1 (139-202)||(8928809-8928872)
chr1 (144-254)||(14626727-14626837)
chr1 (146-203)||(47146367-47146425)
chr1 (141-254)||(9442938-9443051)
chr1 (141-202)||(16785718-16785779)
chr1 (146-203)||(31648585-31648642)
chr1 (144-193)||(38742390-38742439)
chr1 (139-191)||(44311202-44311254)
chr1 (144-203)||(8930345-8930404)
chr1 (143-254)||(23321261-23321372)
chr1 (143-202)||(32131903-32131962)
chr1 (140-203)||(51470124-51470187)
chr1 (144-202)||(14978709-14978767)
chr1 (140-202)||(33645009-33645071)
chr1 (142-202)||(23322609-23322670)
chr1 (143-203)||(33667631-33667692)
chr1 (144-254)||(37194438-37194547)
chr1 (146-202)||(13902066-13902122)
chr1 (143-203)||(44200325-44200385)
chr1 (140-191)||(22591275-22591326)
chr1 (144-203)||(24963002-24963061)
chr1 (140-203)||(38741470-38741533)
chr1 (143-177)||(9439427-9439461)
chr1 (145-191)||(13917281-13917327)
chr1 (143-177)||(24987606-24987640)
chr1 (141-202)||(25600926-25600988)
chr1 (139-177)||(27265936-27265973)
chr1 (143-177)||(28797386-28797420)
chr1 (140-177)||(2472385-2472422)
chr1 (144-177)||(18458827-18458860)
chr1 (144-177)||(25235773-25235806)
chr1 (144-177)||(47022094-47022127)
chr1 (158-203)||(51809769-51809814)
chr1 (140-203)||(1826433-1826497)
chr1 (139-175)||(7112748-7112784)
chr1 (145-177)||(10028002-10028034)
chr1 (139-191)||(15336369-15336421)
chr1 (141-177)||(22604687-22604723)
chr1 (140-203)||(24004514-24004578)
chr1 (140-203)||(24730051-24730115)
chr1 (139-175)||(30659435-30659471)
chr1 (140-191)||(32130639-32130691)
chr1 (143-191)||(35168019-35168067)
[»] chr4 (44 HSPs)
chr4 (144-254)||(20962193-20962302)
chr4 (144-254)||(29248241-29248350)
chr4 (144-203)||(50881421-50881480)
chr4 (140-254)||(34741342-34741456)
chr4 (144-202)||(54554382-54554440)
chr4 (144-192)||(51754210-51754258)
chr4 (143-254)||(34739886-34739997)
chr4 (145-203)||(34027193-34027251)
chr4 (145-254)||(12566887-12566996)
chr4 (148-254)||(51752686-51752791)
chr4 (142-202)||(55500405-55500466)
chr4 (145-253)||(20963649-20963757)
chr4 (146-202)||(21994328-21994384)
chr4 (144-203)||(29249708-29249768)
chr4 (143-202)||(43537836-43537895)
chr4 (143-198)||(50879907-50879962)
chr4 (141-202)||(17695972-17696034)
chr4 (142-203)||(34025911-34025972)
chr4 (145-203)||(54555350-54555408)
chr4 (141-202)||(11862026-11862087)
chr4 (133-193)||(11861891-11861951)
chr4 (144-192)||(43860923-43860971)
chr4 (144-192)||(49629634-49629681)
chr4 (144-203)||(14183610-14183669)
chr4 (141-192)||(40479526-40479577)
chr4 (147-202)||(51164020-51164075)
chr4 (145-203)||(550673-550731)
chr4 (141-203)||(6439181-6439243)
chr4 (143-177)||(11563542-11563576)
chr4 (143-177)||(37273420-37273454)
chr4 (141-203)||(40450254-40450316)
chr4 (157-203)||(44198610-44198656)
chr4 (145-203)||(50138488-50138546)
chr4 (158-203)||(13032900-13032945)
chr4 (144-177)||(20125443-20125476)
chr4 (144-177)||(21780121-21780154)
chr4 (144-177)||(24215766-24215799)
chr4 (140-177)||(35539805-35539842)
chr4 (142-191)||(41331766-41331815)
chr4 (140-176)||(9001439-9001475)
chr4 (147-191)||(12352470-12352514)
chr4 (143-203)||(20612964-20613024)
chr4 (141-177)||(50727586-50727622)
chr4 (141-177)||(50735600-50735636)
[»] chr7 (35 HSPs)
chr7 (142-254)||(17763333-17763445)
chr7 (144-203)||(9553399-9553458)
chr7 (144-203)||(48168849-48168908)
chr7 (141-191)||(1830808-1830858)
chr7 (144-254)||(9554208-9554318)
chr7 (140-254)||(17764648-17764762)
chr7 (144-193)||(1594133-1594182)
chr7 (144-191)||(33757409-33757456)
chr7 (144-254)||(34158057-34158166)
chr7 (138-203)||(8174877-8174942)
chr7 (136-191)||(13772973-13773029)
chr7 (144-191)||(23161099-23161147)
chr7 (141-177)||(44568844-44568880)
chr7 (144-202)||(8175970-8176029)
chr7 (140-203)||(13279416-13279479)
chr7 (144-191)||(19272460-19272507)
chr7 (144-203)||(42509037-42509096)
chr7 (140-203)||(11058169-11058234)
chr7 (139-177)||(23784578-23784616)
chr7 (147-193)||(48896481-48896527)
chr7 (138-202)||(1492753-1492818)
chr7 (162-203)||(1589403-1589444)
chr7 (144-177)||(6269527-6269560)
chr7 (144-177)||(9915650-9915683)
chr7 (144-177)||(9923562-9923595)
chr7 (142-203)||(14554447-14554508)
chr7 (145-202)||(35891010-35891067)
chr7 (143-176)||(35913310-35913343)
chr7 (140-177)||(38193219-38193256)
chr7 (144-203)||(5219035-5219095)
chr7 (144-203)||(11056728-11056788)
chr7 (140-203)||(13286864-13286928)
chr7 (145-177)||(23371449-23371481)
chr7 (145-177)||(39580191-39580223)
chr7 (144-203)||(47160493-47160553)
[»] chr8 (33 HSPs)
chr8 (146-254)||(27164607-27164714)
chr8 (142-254)||(39810035-39810147)
chr8 (145-203)||(2270290-2270348)
chr8 (144-254)||(27163115-27163225)
chr8 (143-203)||(39513865-39513925)
chr8 (145-254)||(39808649-39808756)
chr8 (144-203)||(14329599-14329658)
chr8 (144-203)||(40702009-40702068)
chr8 (145-203)||(1600077-1600135)
chr8 (145-203)||(6105555-6105613)
chr8 (145-202)||(42348961-42349019)
chr8 (144-254)||(42350126-42350236)
chr8 (143-203)||(1601671-1601732)
chr8 (142-203)||(12330330-12330391)
chr8 (142-198)||(31985008-31985065)
chr8 (158-203)||(34901515-34901560)
chr8 (140-177)||(34985347-34985384)
chr8 (140-176)||(27987552-27987588)
chr8 (140-176)||(28044854-28044890)
chr8 (146-190)||(28561435-28561479)
chr8 (146-190)||(28566933-28566977)
chr8 (139-203)||(39451499-39451563)
chr8 (144-175)||(12330590-12330621)
chr8 (139-177)||(29309559-29309597)
chr8 (144-177)||(25277731-25277764)
chr8 (140-177)||(27543650-27543687)
chr8 (145-203)||(31986227-31986287)
chr8 (142-203)||(39515121-39515182)
chr8 (145-177)||(960522-960554)
chr8 (140-191)||(28575122-28575174)
chr8 (143-203)||(31343601-31343661)
chr8 (139-191)||(37402478-37402530)
chr8 (139-175)||(43400665-43400701)
[»] chr3 (45 HSPs)
chr3 (146-254)||(10615276-10615383)
chr3 (144-203)||(37977505-37977564)
chr3 (145-254)||(46610009-46610117)
chr3 (144-203)||(18140939-18140998)
chr3 (140-203)||(46597507-46597570)
chr3 (143-192)||(46596093-46596142)
chr3 (143-203)||(15093713-15093773)
chr3 (139-203)||(18142196-18142260)
chr3 (145-203)||(54567742-54567800)
chr3 (144-203)||(10616772-10616832)
chr3 (144-203)||(15086221-15086281)
chr3 (140-203)||(24729629-24729693)
chr3 (147-203)||(48044276-48044332)
chr3 (139-193)||(12066223-12066277)
chr3 (147-193)||(24910940-24910986)
chr3 (144-202)||(31835841-31835899)
chr3 (141-203)||(34062337-34062399)
chr3 (142-203)||(38843548-38843610)
chr3 (145-193)||(12210028-12210076)
chr3 (144-203)||(22256201-22256261)
chr3 (140-191)||(28208155-28208207)
chr3 (144-203)||(37975968-37976028)
chr3 (141-177)||(49872974-49873010)
chr3 (144-203)||(7248864-7248923)
chr3 (140-203)||(11761077-11761140)
chr3 (144-203)||(25110060-25110119)
chr3 (144-203)||(54012587-54012646)
chr3 (139-202)||(54566506-54566568)
chr3 (146-203)||(4218865-4218923)
chr3 (143-177)||(6510213-6510247)
chr3 (146-203)||(27521521-27521579)
chr3 (142-203)||(28206979-28207041)
chr3 (145-203)||(29184980-29185038)
chr3 (138-191)||(1351478-1351531)
chr3 (144-177)||(36867882-36867915)
chr3 (140-177)||(47115587-47115624)
chr3 (144-177)||(51460788-51460821)
chr3 (143-203)||(14826074-14826134)
chr3 (144-203)||(18704952-18705012)
chr3 (144-176)||(20957195-20957227)
chr3 (143-191)||(33898283-33898331)
chr3 (139-203)||(34061338-34061402)
chr3 (139-191)||(39846591-39846643)
chr3 (159-203)||(45291434-45291478)
chr3 (145-177)||(49880762-49880794)
[»] chr6 (32 HSPs)
chr6 (144-254)||(24234328-24234438)
chr6 (145-203)||(14328645-14328703)
chr6 (145-203)||(14421655-14421713)
chr6 (141-203)||(34762178-34762240)
chr6 (145-254)||(22058227-22058336)
chr6 (144-254)||(24235579-24235689)
chr6 (144-193)||(3063492-3063541)
chr6 (145-254)||(22056482-22056591)
chr6 (143-203)||(33485074-33485135)
chr6 (143-202)||(56112-56171)
chr6 (140-191)||(6000682-6000733)
chr6 (144-202)||(12321561-12321620)
chr6 (145-203)||(33483696-33483755)
chr6 (137-203)||(14327361-14327427)
chr6 (137-203)||(14420371-14420437)
chr6 (144-202)||(12322802-12322861)
chr6 (162-254)||(24914456-24914547)
chr6 (145-203)||(54807-54864)
chr6 (157-203)||(19412402-19412448)
chr6 (139-177)||(29942468-29942506)
chr6 (136-177)||(24387786-24387827)
chr6 (139-200)||(30409671-30409732)
chr6 (143-191)||(5999715-5999763)
chr6 (141-177)||(9234811-9234847)
chr6 (145-177)||(10344050-10344082)
chr6 (145-177)||(13114398-13114430)
chr6 (147-203)||(13114624-13114680)
chr6 (144-176)||(22574056-22574088)
chr6 (143-191)||(26644700-26644748)
chr6 (143-191)||(26750666-26750714)
chr6 (146-202)||(30381567-30381623)
chr6 (131-203)||(30953810-30953882)
[»] chr2 (46 HSPs)
chr2 (143-254)||(38937457-38937567)
chr2 (138-203)||(15747744-15747809)
chr2 (143-254)||(1902928-1903039)
chr2 (145-254)||(7576325-7576434)
chr2 (142-254)||(1904357-1904469)
chr2 (146-202)||(16670500-16670556)
chr2 (145-254)||(38935945-38936052)
chr2 (144-203)||(23835771-23835830)
chr2 (145-203)||(5969725-5969783)
chr2 (148-202)||(28141691-28141745)
chr2 (136-177)||(34635697-34635738)
chr2 (145-254)||(44366867-44366976)
chr2 (139-190)||(16577359-16577410)
chr2 (144-202)||(23834580-23834639)
chr2 (140-175)||(38625162-38625197)
chr2 (144-254)||(7577725-7577835)
chr2 (144-198)||(19686183-19686237)
chr2 (139-200)||(31551903-31551965)
chr2 (143-254)||(38876970-38877080)
chr2 (143-203)||(22468223-22468284)
chr2 (143-203)||(22474444-22474505)
chr2 (144-203)||(28462492-28462552)
chr2 (143-203)||(30371383-30371443)
chr2 (142-202)||(39150223-39150282)
chr2 (139-203)||(44242354-44242418)
chr2 (145-192)||(5970764-5970810)
chr2 (134-177)||(30371621-30371664)
chr2 (144-203)||(36565235-36565294)
chr2 (144-202)||(8237988-8238046)
chr2 (143-177)||(19493473-19493507)
chr2 (157-203)||(19684215-19684261)
chr2 (143-177)||(22116153-22116187)
chr2 (146-203)||(22466982-22467040)
chr2 (139-177)||(29835096-29835134)
chr2 (144-177)||(17328091-17328124)
chr2 (142-203)||(28461065-28461125)
chr2 (142-203)||(28484591-28484652)
chr2 (140-254)||(38815042-38815155)
chr2 (162-203)||(38876006-38876047)
chr2 (139-175)||(18555834-18555870)
chr2 (145-177)||(19641446-19641478)
chr2 (145-177)||(19840039-19840071)
chr2 (139-203)||(32845661-32845725)
chr2 (142-190)||(33441502-33441550)
chr2 (145-177)||(37147551-37147583)
chr2 (143-191)||(38386170-38386218)
[»] scaffold0725 (2 HSPs)
scaffold0725 (144-203)||(3913-3972)
scaffold0725 (144-203)||(4955-5016)
[»] scaffold0228 (3 HSPs)
scaffold0228 (140-203)||(8077-8140)
scaffold0228 (140-203)||(15659-15722)
scaffold0228 (140-203)||(25611-25674)
[»] scaffold0176 (1 HSPs)
scaffold0176 (140-203)||(286-350)
[»] scaffold0250 (2 HSPs)
scaffold0250 (144-203)||(10079-10138)
scaffold0250 (143-203)||(11567-11628)
[»] scaffold0210 (1 HSPs)
scaffold0210 (140-254)||(4702-4816)
[»] scaffold0040 (2 HSPs)
scaffold0040 (145-202)||(64503-64561)
scaffold0040 (142-203)||(66042-66104)
[»] scaffold0769 (1 HSPs)
scaffold0769 (136-177)||(4176-4217)
[»] scaffold0136 (2 HSPs)
scaffold0136 (142-203)||(35596-35657)
scaffold0136 (140-202)||(636-698)
[»] scaffold0289 (1 HSPs)
scaffold0289 (144-191)||(9919-9966)
[»] scaffold0933 (1 HSPs)
scaffold0933 (145-203)||(2717-2775)
[»] scaffold0129 (1 HSPs)
scaffold0129 (145-202)||(37389-37447)
[»] scaffold0014 (2 HSPs)
scaffold0014 (142-198)||(227366-227423)
scaffold0014 (145-203)||(228585-228645)
[»] scaffold0804 (1 HSPs)
scaffold0804 (144-203)||(2732-2792)
[»] scaffold0246 (2 HSPs)
scaffold0246 (143-203)||(15870-15930)
scaffold0246 (141-192)||(17465-17516)
[»] scaffold0095 (1 HSPs)
scaffold0095 (139-203)||(10349-10413)
[»] scaffold0450 (1 HSPs)
scaffold0450 (140-175)||(7854-7889)
[»] scaffold0227 (2 HSPs)
scaffold0227 (145-203)||(24936-24995)
scaffold0227 (146-203)||(23685-23743)
[»] scaffold0039 (1 HSPs)
scaffold0039 (162-203)||(110427-110468)
[»] scaffold0032 (1 HSPs)
scaffold0032 (144-177)||(91049-91082)
[»] scaffold0384 (1 HSPs)
scaffold0384 (145-177)||(4452-4484)
[»] scaffold0142 (1 HSPs)
scaffold0142 (145-177)||(34851-34883)
[»] scaffold0031 (1 HSPs)
scaffold0031 (145-177)||(1827-1859)
[»] scaffold0010 (1 HSPs)
scaffold0010 (145-177)||(26308-26340)


Alignment Details
Target: chr5 (Bit Score: 57; Significance: 7e-24; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 11438333 - 11438397
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  11438333 attttagggttaatagagctttaccccctgtaatatagggtacttttggttttgctccctgtaaa 11438397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 254
Target Start/End: Complemental strand, 15061882 - 15061772
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagatt 242  Q
    |||||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||           ||||||||| ||||| ||||||||||||    
T  15061882 tagggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaaaaaaataaatttagattccgtccttgt-aaaatgaagatt 15061784  T
Q  243 cttcaagattgc 254  Q
    ||||||||||||    
T  15061783 cttcaagattgc 15061772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 15060162 - 15060272
Alignment:
Q  144 agggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagatt 242  Q
    ||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||||           ||||||||| ||||| ||||||||||||    
T  15060162 agggttaataggtctttacccccctgtaatataggacacttttggttttgccccctgtaaaaatttttttttagattccgtccttgt-aaaatgaagatt 15060260  T
Q  243 cttcaagattgc 254  Q
    ||||||||||||    
T  15060261 cttcaagattgc 15060272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 15616558 - 15616448
Alignment:
Q  144 agggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagatt 242  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||||||||| |||||||||           ||||||||| ||||| ||||||||||||    
T  15616558 agggttaataggtctttacccccctgtaatataggacacttttggttttgccccctgtaaaaaaaaaaatttagattccgtccttgt-aaaatgaagatt 15616460  T
Q  243 cttcaagattgc 254  Q
    ||||||||||||    
T  15616459 cttcaagattgc 15616448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 254
Target Start/End: Original strand, 41064141 - 41064253
Alignment:
Q  142 ttagggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaaga 240  Q
    ||||||||||||| |||||||||| ||||||||||||  |||||||||||||| |||||||||           ||||||||| ||||| ||||||||||    
T  41064141 ttagggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaaattttttttttagattccgtccttgt-aaaatgaaga 41064239  T
Q  241 ttcttcaagattgc 254  Q
    ||||||||||||||    
T  41064240 ttcttcaagattgc 41064253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 21776964 - 21776855
Alignment:
Q  145 gggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagattc 243  Q
    |||||||||| |||||||||| ||||||||||||  |||||||||||||| |||||||||           ||||||||| ||||| |||||||||||||    
T  21776964 gggttaataggtctttacccctctgtaatatagggcacttttggttttgccccctgtaaatttttttttttagattccgtccttgt-aaaatgaagattc 21776866  T
Q  244 ttcaagattgc 254  Q
    |||||||||||    
T  21776865 ttcaagattgc 21776855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 37274748 - 37274805
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  37274748 gggttaatagagctttaccccctataatatagggtacttttggttttgccccctgtaa 37274805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 30796579 - 30796687
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagattct 244  Q
    |||||||||| |||||||||||| |||||||||  |||||||||||||| || ||||||           ||||||||| ||||| ||||||||||||||    
T  30796579 gggttaataggtctttaccccctataatatagggcacttttggttttgccccttgtaaatttttttttttagattccgtccttgt-aaaatgaagattct 30796677  T
Q  245 tcaagattgc 254  Q
    ||||||||||    
T  30796678 tcaagattgc 30796687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 254
Target Start/End: Complemental strand, 11957708 - 11957597
Alignment:
Q  143 tagggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagat 241  Q
    |||||||||||| ||||||||||| |||||||||||  |||||||||||||| |||||||||           ||||||||| ||||| ||||||| |||    
T  11957708 tagggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaaattttttttttagattccgtccttgt-aaaatgacgat 11957610  T
Q  242 tcttcaagattgc 254  Q
    |||||||||||||    
T  11957609 tcttcaagattgc 11957597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 11956138 - 11956248
Alignment:
Q  144 agggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagatt 242  Q
    ||||||||||| |||||||||| ||||||||||||  |||||||||||||  |||||||||           ||||||||| ||||| ||||||||||||    
T  11956138 agggttaataggtctttacccccctgtaatatagggcacttttggttttggcccctgtaaaattttttttttagattccgtccttgt-aaaatgaagatt 11956236  T
Q  243 cttcaagattgc 254  Q
    ||||||||||||    
T  11956237 cttcaagattgc 11956248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 254
Target Start/End: Original strand, 15615101 - 15615211
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagatt 242  Q
    |||||||||||| ||||||||||||||||||||||  |||||||||||||  ||| |||||           ||||||||| ||||| ||| ||||||||    
T  15615101 tagggttaataggtctttaccccctgtaatatagggcacttttggttttgtccccggtaaaattttttttttagattccgtccttgt-aaattgaagatt 15615199  T
Q  243 cttcaagattgc 254  Q
    ||||||||||||    
T  15615200 cttcaagattgc 15615211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 40434463 - 40434405
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||||||  ||||||| |||||||||| |||||||||||||||||||| |||||    
T  40434463 agggttaatagacatttaccctctgtaatataagatacttttggttttgctccatgtaa 40434405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 28819537 - 28819594
Alignment:
Q  146 ggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||  |||||||||||||||||||||  |||||||||||||| |||||||||    
T  28819537 ggttaataggcctttaccccctgtaatataggtcacttttggttttgccccctgtaaa 28819594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 22551514 - 22551554
Alignment:
Q  137 agattttagggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  22551514 agattttagggttaataggtctttaccccctgtaatatagg 22551554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 35599307 - 35599371
Alignment:
Q  140 ttttagggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||| ||||||||||| ||||||||| ||||||||||||  |||||||||||||| |||||||||    
T  35599307 tttttgggttaatagacctttacccccctgtaatataggtcacttttggttttgccccctgtaaa 35599371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 9751734 - 9751675
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||   ||||||||||||||||||||  |||||||||||||| |||||||||    
T  9751734 agggttaataggcttttaccccctgtaatataggtcacttttggttttgccccctgtaaa 9751675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 38482317 - 38482376
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||| ||||||||||||||||||||||  | || ||||||| |||||||||||    
T  38482317 agggttaataggtctttaccccctgtaatataggtcaattctggttttcctccctgtaaa 38482376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 12399643 - 12399585
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||| |||||||||||||||||||||| || ||| |||||| | |||||||||    
T  12399643 gggttaataggtctttaccccctgtaatataggttattttcggttttcccccctgtaaa 12399585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 41065715 - 41065605
Alignment:
Q  144 agggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagatt 242  Q
    ||||||||||| ||||||||||| |||||||||||  |||||||||||||  |||||||||           ||||||| | ||||| ||||||||||||    
T  41065715 agggttaataggtctttacccccctgtaatatagggcacttttggttttggcccctgtaaaattttttttttagattccttccttgt-aaaatgaagatt 41065617  T
Q  243 cttcaagattgc 254  Q
    ||||||||||||    
T  41065616 cttcaagattgc 41065605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 10011619 - 10011676
Alignment:
Q  146 ggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||| |||||| ||| |||||||||||| |||||||||||||| |||| ||||    
T  10011619 ggttaataggtctttatcccgtgtaatataggacacttttggttttgccccctctaaa 10011676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 10012869 - 10012816
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatataggatacttttggttttg 192  Q
    ||||| |||||||||| |||||| || |||||||||||| ||||||||||||||    
T  10012869 atttttgggttaataggtctttatcctctgtaatatagggtacttttggttttg 10012816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 13948638 - 13948581
Alignment:
Q  146 ggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||  ||||||| |||||||||||||  |||||||||||||| |||||||||    
T  13948638 ggttaataggcctttacctcctgtaatatagggcacttttggttttgccccctgtaaa 13948581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 4060458 - 4060517
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||| ||||||||||| ||||||||  |||| |||||||||| || ||||||    
T  4060458 agggttaatagagctttaccccctctaatatagagtactcttggttttgccccttgtaaa 4060517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 10976815 - 10976772
Alignment:
Q  134 tttagattttagggttaatagatctttaccccctgtaatatagg 177  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||    
T  10976815 tttaaattatagggttaataggtctttaccccctgtaatatagg 10976772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 11890161 - 11890099
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||| ||||||||||  ||||||||| |||||||||||  |||||||||||||| ||||||||    
T  11890161 atttttgggttaataggcctttacccc-tgtaatataggtcacttttggttttgccccctgtaa 11890099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 254
Target Start/End: Complemental strand, 30798638 - 30798527
Alignment:
Q  142 ttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagat 241  Q
    ||||||||||||| |||||||||||  |||||||||  ||| ||| |||||| ||||||||            ||||||||| ||||| |||||||||||    
T  30798638 ttagggttaataggtctttaccccccttaatatagggcactattgattttgccccctgtaattttttttttttagattccgtccttgt-aaaatgaagat 30798540  T
Q  242 tcttcaagattgc 254  Q
    |||||||||||||    
T  30798539 tcttcaagattgc 30798527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 33052811 - 33052849
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  33052811 attttagggttaataggtctttaccccttgtaatatagg 33052849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 889065 - 889114
Alignment:
Q  142 ttagggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    ||||||||||||| |||||||||| |||||||||||  || |||||||||    
T  889065 ttagggttaataggtctttaccccttgtaatataggccacatttggtttt 889114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 5802416 - 5802473
Alignment:
Q  146 ggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||||||||||||| ||||||||  | || ||||||| | |||||||||    
T  5802416 ggttaatagatctttaccccctgcaatataggtcatttctggtttttccccctgtaaa 5802473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 9750445 - 9750506
Alignment:
Q  143 tagggttaatagatctttaccccct-gtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||  ||||||||||| ||||||||||  |||||||||||||  |||||||||    
T  9750445 tagggttaataggcctttacccccttgtaatataggtcacttttggttttgtcccctgtaaa 9750506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 15395540 - 15395589
Alignment:
Q  141 tttagggttaatagatctttaccccctgtaatataggatacttttggttt 190  Q
    |||||||||||||| | |||||||||||||| |||||  |||||||||||    
T  15395540 tttagggttaataggtttttaccccctgtaaaataggtcacttttggttt 15395589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 29104443 - 29104476
Alignment:
Q  144 agggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||| ||||||||||||||||||||||    
T  29104443 agggttaataggtctttaccccctgtaatatagg 29104476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 29520136 - 29520182
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgc 193  Q
    ||||||||||||||||| ||  ||||||||||| |||||||||||||||    
T  29520136 gggttaatagatctttatcc--tgtaatatagggtacttttggttttgc 29520182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 11439858 - 11439806
Alignment:
Q  141 tttagggttaatagatctttaccccctgtaatataggatacttttggttttgc 193  Q
    |||||||||||||| |||||| | ||||||||||||   ||||||||||||||    
T  11439858 tttagggttaataggtctttatctcctgtaatatagagcacttttggttttgc 11439806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 19601325 - 19601265
Alignment:
Q  144 agggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||  |||||||||| |||||||||||  ||||||||||||||  ||||||||    
T  19601325 agggttaataggcctttacccccctgtaatataggtcacttttggttttgcatcctgtaaa 19601265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 26888516 - 26888456
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||   ||||||| || |||||||||  |||||||||||||| |||||||||    
T  26888516 tagggttaatagtgttttaccctctataatataggtcacttttggttttgccccctgtaaa 26888456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 14625369 - 14625478
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagattc 243  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||           ||||||||| ||||| |||||||||||||    
T  14625369 agggttaataggtctttaccccctgtaatataggacacttttggttttgccccctgtaaaattttttttttagattccgtccttgt-aaaatgaagattc 14625467  T
Q  244 ttcaagattgc 254  Q
    |||||||||||    
T  14625468 ttcaagattgc 14625478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 26097093 - 26097026
Alignment:
Q  136 tagattttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||| ||||||||||| ||||||||||||||||||||||  ||||||||||||||  ||||||||    
T  26097093 tagatttaagggttaataggtctttaccccctgtaatataggtcacttttggttttgcctcctgtaaa 26097026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 43635830 - 43635893
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||||| ||||||||||||||||||||||  |||||||||||||| |||| ||||    
T  43635830 ttttagggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctttaaa 43635893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 9441566 - 9441676
Alignment:
Q  144 agggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagatt 242  Q
    ||||||||||| |||||||||| |||||||||| || |||||||||||||| |||||||||           ||||||||| ||||| ||||||||||||    
T  9441566 agggttaataggtctttacccccctgtaatataagacacttttggttttgccccctgtaaaaaattttttttagattccgtccttgt-aaaatgaagatt 9441664  T
Q  243 cttcaagattgc 254  Q
    ||||||||||||    
T  9441665 cttcaagattgc 9441676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 13903429 - 13903380
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgc 193  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  13903429 agggttaatagatctttaccccctgtaatataggtcacttttggttttgc 13903380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 1825296 - 1825352
Alignment:
Q  147 gttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||    
T  1825296 gttaataggtctttaccccctgtaatataggtcacttttggttttgccccctgtaaa 1825352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 26095812 - 26095872
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||| ||||||||||||||||||||||  |||| ||||||||| |||||||||    
T  26095812 tagggttaataggtctttaccccctgtaatataggtcacttatggttttgccccctgtaaa 26095872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 8928809 - 8928872
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    |||||||||||||||| |||||||||||||||||||| |  ||||||| |||||| ||||||||    
T  8928809 attttagggttaataggtctttaccccctgtaatataaggcacttttgattttgccccctgtaa 8928872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 14626837 - 14626727
Alignment:
Q  144 agggttaatagatctttac-cccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagatt 242  Q
    ||||||||||| ||||||| |||||||||||||||  ||||||||||||||  ||||||||           ||||||||| ||||| ||||||||||||    
T  14626837 agggttaataggtctttactcccctgtaatatagggcacttttggttttgcctcctgtaaatttttttttttagattccgtccttgt-aaaatgaagatt 14626739  T
Q  243 cttcaagattgc 254  Q
    ||||||||||||    
T  14626738 cttcaagattgc 14626727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 47146425 - 47146367
Alignment:
Q  146 ggttaatagatctttaccccct-gtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||| |||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  47146425 ggttaataggtctttacccccttgtaatataggtcacttttggttttgctccctgtaaa 47146367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 9443051 - 9442938
Alignment:
Q  141 tttagggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaag 239  Q
    |||||||||||||| ||||||||||| ||||||||||   |||||||||||||| || ||||||           ||||||||| ||||| |||||||||    
T  9443051 tttagggttaataggtctttacccccctgtaatatagagcacttttggttttgccccttgtaaaaaaaattttttagattccgtccttgt-aaaatgaag 9442953  T
Q  240 attcttcaagattgc 254  Q
    |||||||||||||||    
T  9442952 attcttcaagattgc 9442938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 16785718 - 16785779
Alignment:
Q  141 tttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||||||||  |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  16785718 tttagggttaataggcctttaccccctgtaatgtaggtcacttttggttttgccccctgtaa 16785779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 31648642 - 31648585
Alignment:
Q  146 ggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||| ||||||||||||||||||||| || |||||||||||  |||||||||    
T  31648642 ggttaatagacctttaccccctgtaatataggttatttttggttttgtcccctgtaaa 31648585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 38742439 - 38742390
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgc 193  Q
    |||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  38742439 agggttaatagagctttaccccctgtaatatagggtacttttgattttgc 38742390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 44311202 - 44311254
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||||| ||||    
T  44311202 attttagggttaataggcctttaccccctgtaatataggacacttttgctttt 44311254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 8930404 - 8930345
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||  |||||||||||||||||| | ||||||||||||||  |||||||||    
T  8930404 agggttaatagagttttaccccctgtaatataaggtacttttggttttgtcccctgtaaa 8930345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 254
Target Start/End: Original strand, 23321261 - 23321372
Alignment:
Q  143 tagggttaatagatctttaccc-cctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagat 241  Q
    ||||||||||||||||||| || |||||||||||||  |||||||||||||| || ||||||           ||||||||| ||||| |||||||||||    
T  23321261 tagggttaatagatctttatcctcctgtaatatagggcacttttggttttgccccatgtaaaaaaaaaaaattagattccgtccttgt-aaaatgaagat 23321359  T
Q  242 tcttcaagattgc 254  Q
    |||||| ||||||    
T  23321360 tcttcacgattgc 23321372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 32131962 - 32131903
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    |||||||||||| ||||||||||||||||||||||  ||||| |||||||| || |||||    
T  32131962 tagggttaataggtctttaccccctgtaatataggtcactttcggttttgccccttgtaa 32131903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 51470124 - 51470187
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||| |||||||||| |||||||||||||||||||| |  |||||||||||||| | |||||||    
T  51470124 tttttgggttaataggtctttaccccctgtaatataagtcacttttggttttgccctctgtaaa 51470187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 14978767 - 14978709
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    |||||||||||  ||||||||||||| |||||||| |||||||||||||| || |||||    
T  14978767 agggttaataggcctttaccccctgttatataggacacttttggttttgccccttgtaa 14978709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 33645009 - 33645071
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    |||| |||||| ||||||||||||||||||||||||||  ||||||| |||||| || |||||    
T  33645009 tttttgggttattagatctttaccccctgtaatataggtcacttttgattttgccccttgtaa 33645071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 23322670 - 23322609
Alignment:
Q  142 ttagggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||||||| ||||||||||| ||||||||||   |||||||||||||| ||||||||    
T  23322670 ttagggttaataggtctttacccccctgtaatatagagcacttttggttttgccccctgtaa 23322609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 33667692 - 33667631
Alignment:
Q  143 tagggttaatagatctttac-cccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||  |||||| |||||||||||||||  |||||||||||||| |||||||||    
T  33667692 tagggttaataggcctttacacccctgtaatataggtcacttttggttttgccccctgtaaa 33667631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 37194547 - 37194438
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagattc 243  Q
    |||||||||||| |||||| ||||||||||||||| | |||||||||| | |||| ||||           ||||||||| ||||| ||||| |||||||    
T  37194547 agggttaatagaactttactccctgtaatataggacatttttggtttttccccctctaaatttttttttttagattccgtccttgt-aaaataaagattc 37194449  T
Q  244 ttcaagattgc 254  Q
    |||||||||||    
T  37194448 ttcaagattgc 37194438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 13902066 - 13902122
Alignment:
Q  146 ggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||| |||||||| |||||||||||||  | |||||||||||| ||||||||    
T  13902066 ggttaataggtctttaccacctgtaatatagggcagttttggttttgccccctgtaa 13902122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 44200325 - 44200385
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||| |||||||||| |||||||||||  | |||||||||| | |||||||||    
T  44200325 tagggttaataggtctttaccccttgtaatataggccatttttggttttccaccctgtaaa 44200385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 22591275 - 22591326
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    |||||||||||||||  ||||||||| |||||||||||  ||||||||||||    
T  22591275 ttttagggttaataggcctttaccccttgtaatataggtcacttttggtttt 22591326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 24963061 - 24963002
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||   |||||||||||||||||||| || ||||| |||| |||||||||||    
T  24963061 agggttaataggcttttaccccctgtaatataggttatttttgattttcctccctgtaaa 24963002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 38741470 - 38741533
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||||    |||| ||||||||||||| || |||||||||||||| |||||||||    
T  38741470 ttttagggttaataatgttttaacccctgtaatataagacacttttggttttgccccctgtaaa 38741533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Complemental strand, 9439461 - 9439427
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||||| ||||||||||||||||||||||    
T  9439461 tagggttaataggtctttaccccctgtaatatagg 9439427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 13917327 - 13917281
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    |||||||||||  |||| |||||||||||||||| ||||||||||||    
T  13917327 gggttaatagagttttatcccctgtaatataggacacttttggtttt 13917281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Original strand, 24987606 - 24987640
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||||| ||||||||||||||||||||||    
T  24987606 tagggttaataggtctttaccccctgtaatatagg 24987640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 25600926 - 25600988
Alignment:
Q  141 tttagggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaa 202  Q
    |||||||||||||| |||||||||| ||| ||||||||  |||||||||||| | ||||||||    
T  25600926 tttagggttaataggtctttacccctctgcaatataggtcacttttggttttcccccctgtaa 25600988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 27265973 - 27265936
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  27265973 attttagggttaatagat-tttaccccctgtaatatagg 27265936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Complemental strand, 28797420 - 28797386
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||| |||||||||||||||||||||||    
T  28797420 tagggttaataaatctttaccccctgtaatatagg 28797386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 2472385 - 2472422
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  2472385 ttttagggttaataggtctttaacccctgtaatatagg 2472422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 18458860 - 18458827
Alignment:
Q  144 agggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||| ||||||||||||||||||||||    
T  18458860 agggttaataggtctttaccccctgtaatatagg 18458827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 25235773 - 25235806
Alignment:
Q  144 agggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||| ||||||||||||||||||||||    
T  25235773 agggttaataggtctttaccccctgtaatatagg 25235806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 47022127 - 47022094
Alignment:
Q  144 agggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||| ||||||||||||||||||||||    
T  47022127 agggttaataggtctttaccccctgtaatatagg 47022094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 51809769 - 51809814
Alignment:
Q  158 tttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||||||||||| || |||||||||| | |||||||||    
T  51809769 tttaccccctgtaatataggttatttttggtttttccccctgtaaa 51809814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 1826497 - 1826433
Alignment:
Q  140 ttttagggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||||  | ||||||||| |||||||||||  ||||||| |||||| |||||||||    
T  1826497 ttttagggttaatatgtttttacccccctgtaatataggtcacttttgattttgccccctgtaaa 1826433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 7112784 - 7112748
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatata 175  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  7112784 attttaaggttaataggtctttaccccctgtaatata 7112748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Complemental strand, 10028034 - 10028002
Alignment:
Q  145 gggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||| ||||||||||||||||||||||    
T  10028034 gggttaataggtctttaccccctgtaatatagg 10028002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 15336369 - 15336421
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    ||||| || ||||||| ||||||||||||||||||||||  | ||||||||||    
T  15336369 atttttggattaataggtctttaccccctgtaatataggtcatttttggtttt 15336421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 22604723 - 22604687
Alignment:
Q  141 tttagggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||||||| |||||| |||||||||||||||    
T  22604723 tttagggttaataggtctttaacccctgtaatatagg 22604687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 24004514 - 24004578
Alignment:
Q  140 ttttagggttaatagatcttta-ccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||| | |||||| ||||||||||||||||  | |||| ||||| |||||||||||    
T  24004514 ttttagggttaatggttctttaaccccctgtaatataggtcattttttgttttcctccctgtaaa 24004578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 24730051 - 24730115
Alignment:
Q  140 ttttagggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||| |  ||||||||| ||||||||||||  | |||||||||| |||||||||||    
T  24730051 ttttagggttaatggtgctttacccccctgtaatataggtcatttttggtttttctccctgtaaa 24730115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 30659471 - 30659435
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatata 175  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  30659471 attttcgggttaataggtctttaccccctgtaatata 30659435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 32130639 - 32130691
Alignment:
Q  140 ttttagggttaatagatctttaccccct-gtaatataggatacttttggtttt 191  Q
    |||||||||||||||  ||||||||||| ||||||||||  ||||||||||||    
T  32130639 ttttagggttaataggcctttaccccctagtaatataggtcacttttggtttt 32130691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 35168067 - 35168019
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    ||||||||||||  |||||||||||||||||||||  | ||||||||||    
T  35168067 tagggttaatagtgctttaccccctgtaatataggtcatttttggtttt 35168019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 20962193 - 20962302
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagattc 243  Q
    |||||||||||||||||||||||||||||||| |  |||||||||||||| |||||||||           ||||||||| ||||| |||||||||||||    
T  20962193 agggttaatagatctttaccccctgtaatatatggcacttttggttttgccccctgtaaaaatttttttttagattccgtccttgt-aaaatgaagattc 20962291  T
Q  244 ttcaagattgc 254  Q
    |||||||||||    
T  20962292 ttcaagattgc 20962302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 29248241 - 29248350
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagattc 243  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||| | | |||||||           ||||||||| ||||| |||||||||||||    
T  29248241 agggttaataggtctttaccccctgtaatataggacacttttggttttacccgctgtaaatttatttttttagattccgtccttgt-aaaatgaagattc 29248339  T
Q  244 ttcaagattgc 254  Q
    |||||||||||    
T  29248340 ttcaagattgc 29248350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 50881480 - 50881421
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||    
T  50881480 agggttaataggtctttaccccctgtaatataggccacttttggttttgccccctgtaaa 50881421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 254
Target Start/End: Complemental strand, 34741456 - 34741342
Alignment:
Q  140 ttttagggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaa 238  Q
    ||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||| |||||||||           ||||||||| ||||| ||||||||    
T  34741456 ttttaggcttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaaattttttttttagattccgtccttgt-aaaatgaa 34741358  T
Q  239 gattcttcaagattgc 254  Q
    ||||||||||||||||    
T  34741357 gattcttcaagattgc 34741342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 54554382 - 54554440
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||    
T  54554382 agggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaa 54554440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 51754258 - 51754210
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttg 192  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  51754258 agggttaatagagctttaccccctgtaatatagggtacttttggttttg 51754210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 254
Target Start/End: Original strand, 34739886 - 34739997
Alignment:
Q  143 tagggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagat 241  Q
    |||||||||||| |||||||||| ||||||||||||  |||||||||||||  |||||||||           ||||||||| ||||| |||||||||||    
T  34739886 tagggttaataggtctttacccccctgtaatatagggcacttttggttttggcccctgtaaaaaaatttttttagattccgtccttgt-aaaatgaagat 34739984  T
Q  242 tcttcaagattgc 254  Q
    |||||||||||||    
T  34739985 tcttcaagattgc 34739997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 34027251 - 34027193
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||  |||||||||||||||||||||  |||||||||||||| |||||||||    
T  34027251 gggttaataggcctttaccccctgtaatataggtcacttttggttttgccccctgtaaa 34027193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 12566996 - 12566887
Alignment:
Q  145 gggttaatagatctttaccccct-gtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagattc 243  Q
    |||||||||| |||||||||||| ||||||||||  |||||||||||||| |||||||||           |||||| || ||||| |||||||||||||    
T  12566996 gggttaataggtctttacccccttgtaatatagggcacttttggttttgccccctgtaaaatttgtttcttagattctgtccttgt-aaaatgaagattc 12566898  T
Q  244 ttcaagattgc 254  Q
    |||||||||||    
T  12566897 ttcaagattgc 12566887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 254
Target Start/End: Original strand, 51752686 - 51752791
Alignment:
Q  148 ttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagattcttca 247  Q
    ||||||| |||||||||||||||||||| || ||||||| |||||| |||||||||           ||||||||| ||||| |||||||||||||||||    
T  51752686 ttaataggtctttaccccctgtaatatatgacacttttgattttgccccctgtaaaaaaaataaattagattccgtccttgt-aaaatgaagattcttca 51752784  T
Q  248 agattgc 254  Q
     ||||||    
T  51752785 cgattgc 51752791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 55500466 - 55500405
Alignment:
Q  142 ttagggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||||||| ||||||||||| |||||||||||| | |||||||||||| ||||||||    
T  55500466 ttagggttaataggtctttacccccctgtaatataggacatttttggttttgccccctgtaa 55500405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 253
Target Start/End: Complemental strand, 20963757 - 20963649
Alignment:
Q  145 gggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagattc 243  Q
    |||||||||| ||||||||||| |||||||||||  |||||||| ||||| |||||||||           ||||||||| ||||| |||||||||||||    
T  20963757 gggttaataggtctttacccccctgtaatatagggcacttttggctttgccccctgtaaatttttttttttagattccgtccttgt-aaaatgaagattc 20963659  T
Q  244 ttcaagattg 253  Q
    ||||||||||    
T  20963658 ttcaagattg 20963649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 21994328 - 21994384
Alignment:
Q  146 ggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||  ||||||||    
T  21994328 ggttaataggtctttaccccctgtaatataggacacttttgattttgtcccctgtaa 21994384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 29249768 - 29249708
Alignment:
Q  144 agggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||| ||||||||||| |||||||||||  |||||||||||||| |||||||||    
T  29249768 agggttaataggtctttacccccctgtaatatagggaacttttggttttgccccctgtaaa 29249708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 43537895 - 43537836
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||| ||| ||||||| ||| ||||||||||||||||||||||| | ||||||||    
T  43537895 tagggttaaaagagctttacctcctctaatataggatacttttggttttcccccctgtaa 43537836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 198
Target Start/End: Original strand, 50879907 - 50879962
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggttttgctccct 198  Q
    |||||||||||| |||||||  |||||||||||||  |||||||||||||||||||    
T  50879907 tagggttaataggtctttacttcctgtaatataggccacttttggttttgctccct 50879962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 17696034 - 17695972
Alignment:
Q  141 tttagggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||||||||  |||||||||| ||||||||| || |||||||||||||| ||||||||    
T  17696034 tttagggttaatagtcctttacccccctgtaatataagacacttttggttttgccccctgtaa 17695972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 34025911 - 34025972
Alignment:
Q  142 ttagggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||||| |||||||||| |||||||||||  |||||||||||||| |||||||||    
T  34025911 ttagggttaatagacctttacccccttgtaatataggtcacttttggttttgc-ccctgtaaa 34025972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 54555408 - 54555350
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||  |||||||||||||||||||| |  |||||||||||||| |||||||||    
T  54555408 gggttaataagtctttaccccctgtaatatatggcacttttggttttgccccctgtaaa 54555350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 11862087 - 11862026
Alignment:
Q  141 tttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||||||||  ||||||||  |||||||||| | |||||||||||||| ||||||||    
T  11862087 tttagggttaataggcctttaccctttgtaatatagaacacttttggttttgccccctgtaa 11862026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 11861891 - 11861951
Alignment:
Q  133 ttttagattttagggttaatagatctttaccccctgtaatataggatacttttggttttgc 193  Q
    ||||| |||||||||||||| |  ||||||||||||||||||||   ||||||||||||||    
T  11861891 ttttaaattttagggttaatgggcctttaccccctgtaatatagagcacttttggttttgc 11861951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 43860971 - 43860923
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttg 192  Q
    ||||||||||| |||||||| |||||||||||||  |||||||||||||    
T  43860971 agggttaataggtctttacctcctgtaatatagggcacttttggttttg 43860923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 49629634 - 49629681
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttg 192  Q
    |||||||||||| ||||||||||||||| |||||| |||||||||||||    
T  49629634 agggttaatagacctttaccccctgtaa-ataggacacttttggttttg 49629681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 14183610 - 14183669
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||   |||||||||| |||||||||  |||||||||||||||| |||||||    
T  14183610 agggttaatagtgttttaccccctctaatatagggcacttttggttttgctctctgtaaa 14183669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 40479577 - 40479526
Alignment:
Q  141 tttagggttaatagatctttaccccctgtaatataggatacttttggttttg 192  Q
    |||||||||||||| || ||| || |||||||||||| ||||||||||||||    
T  40479577 tttagggttaataggtcattatcctctgtaatatagggtacttttggttttg 40479526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 51164075 - 51164020
Alignment:
Q  147 gttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||  ||||||||||| |||||||||  |||||||||||||| ||||||||    
T  51164075 gttaataggcctttaccccctataatataggtcacttttggttttgccccctgtaa 51164020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 550673 - 550731
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||| ||||||||||||||||||||||  | |||| ||||||| || ||||||    
T  550673 gggttaataggtctttaccccctgtaatataggtcatttttagttttgccccttgtaaa 550731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 6439181 - 6439243
Alignment:
Q  141 tttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||||  |||||||||||||||||||||  | ||| |||||| | |||||||||    
T  6439181 tttagggttaatagtgctttaccccctgtaatataggtcattttcggttttacaccctgtaaa 6439243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Complemental strand, 11563576 - 11563542
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||||| ||||||||||||||||||||||    
T  11563576 tagggttaataggtctttaccccctgtaatatagg 11563542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Complemental strand, 37273454 - 37273420
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||||| ||||||||||||||||||||||    
T  37273454 tagggttaataggtctttaccccctgtaatatagg 37273420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 40450254 - 40450316
Alignment:
Q  141 tttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||| |   |||||||||||||||||||| || |||| ||||| |||||||||||    
T  40450254 tttagggttaatggtgttttaccccctgtaatataggttattttttgttttcctccctgtaaa 40450316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 44198610 - 44198656
Alignment:
Q  157 ctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||||||||||   ||||||||||||||||| ||||||    
T  44198610 ctttaccccctgtaatatagaccacttttggttttgctccatgtaaa 44198656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 50138488 - 50138546
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||| ||||||||||||||||||||||  | ||| |||||| | |||||||||    
T  50138488 gggttaataggtctttaccccctgtaatataggtcattttcggtttttccccctgtaaa 50138546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 13032900 - 13032945
Alignment:
Q  158 tttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||||||||||  | |||||||||| |||||||||||    
T  13032900 tttaccccctgtaatataggtcatttttggttttcctccctgtaaa 13032945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 20125476 - 20125443
Alignment:
Q  144 agggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||| ||||||||||||||||||||||    
T  20125476 agggttaataggtctttaccccctgtaatatagg 20125443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 21780121 - 21780154
Alignment:
Q  144 agggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||| ||||||||||||||||||||||    
T  21780121 agggttaataggtctttaccccctgtaatatagg 21780154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 24215799 - 24215766
Alignment:
Q  144 agggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||| ||||||||||||||||||||||    
T  24215799 agggttaataggtctttaccccctgtaatatagg 24215766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 35539842 - 35539805
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  35539842 ttttagggttaataggtatttaccccctgtaatatagg 35539805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 41331766 - 41331815
Alignment:
Q  142 ttagggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    ||||||||||||| |||||| |||||| ||||||||  ||||||||||||    
T  41331766 ttagggttaataggtctttatcccctgcaatataggtcacttttggtttt 41331815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 9001439 - 9001475
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatatag 176  Q
    ||||||||||||||| | |||||||||||||||||||    
T  9001439 ttttagggttaataggtttttaccccctgtaatatag 9001475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 12352514 - 12352470
Alignment:
Q  147 gttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    ||||||||  |||||||||||||||||||||  ||||||||||||    
T  12352514 gttaataggcctttaccccctgtaatataggtcacttttggtttt 12352470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 20612964 - 20613024
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||| |||||||  |||||||||||| ||||||||  |||||||||||| | |||||||||    
T  20612964 taggattaataggcctttaccccctgcaatataggtcacttttggttttcccccctgtaaa 20613024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 50727586 - 50727622
Alignment:
Q  141 tttagggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||||||| | ||||||||||||||||||||    
T  50727586 tttagggttaataggtttttaccccctgtaatatagg 50727622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 50735600 - 50735636
Alignment:
Q  141 tttagggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||||||| | ||||||||||||||||||||    
T  50735600 tttagggttaataggtttttaccccctgtaatatagg 50735636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 254
Target Start/End: Original strand, 17763333 - 17763445
Alignment:
Q  142 ttagggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaaga 240  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||||           ||||||||| ||||| ||||||||||    
T  17763333 ttagggttaataggtctttacccctctgtaatataggacacttttggttttgccccctgtaaaattttttttttagattccgtccttgt-aaaatgaaga 17763431  T
Q  241 ttcttcaagattgc 254  Q
    ||||||||||||||    
T  17763432 ttcttcaagattgc 17763445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 9553399 - 9553458
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||||||  ||||||||    
T  9553399 agggttaataggtctttaccccctgtaatatagggcacttttggttttgcctcctgtaaa 9553458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 48168849 - 48168908
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||| ||||||||| ||||||||||||  |||||||||||||| |||||||||    
T  48168849 agggttaataggtctttaccctctgtaatatagggcacttttggttttgccccctgtaaa 48168908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 1830808 - 1830858
Alignment:
Q  141 tttagggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    ||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  1830808 tttagggttaatagggctttaccccctgtaatataggatacttttgatttt 1830858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 9554318 - 9554208
Alignment:
Q  144 agggttaatagatctttaccc-cctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagatt 242  Q
    |||||||||| |||||||||| |||||||||||||  |||||||||||||| |||||||||           ||||||||| ||||| ||||||||||||    
T  9554318 agggttaataaatctttaccctcctgtaatatagggcacttttggttttgccccctgtaaaaaaaaaaaattagattccgtccttgt-aaaatgaagatt 9554220  T
Q  243 cttcaagattgc 254  Q
    ||||| ||||||    
T  9554219 cttcacgattgc 9554208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 254
Target Start/End: Complemental strand, 17764762 - 17764648
Alignment:
Q  140 ttttagggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaa 238  Q
    |||| |||||||||| ||||||| || ||||||||||||  |||||||||||||| |||||||||           ||||||||| ||||| ||||||||    
T  17764762 tttttgggttaataggtctttactccactgtaatatagggcacttttggttttgccccctgtaaaaaaaattttttagattccgtccttgt-aaaatgaa 17764664  T
Q  239 gattcttcaagattgc 254  Q
    ||||||||||||||||    
T  17764663 gattcttcaagattgc 17764648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 1594182 - 1594133
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgc 193  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  1594182 agggttaataggtctttaccccctgtaatataggtcacttttggttttgc 1594133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 33757409 - 33757456
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    ||||||||||||||||||||||||||||||||||  ||||||| ||||    
T  33757409 agggttaatagatctttaccccctgtaatataggtcacttttgatttt 33757456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 34158057 - 34158166
Alignment:
Q  144 agggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagatt 242  Q
    ||||||||||| |||||||||| ||||||||||||  |||||||||||||| ||||| |||           ||||||||| ||||| ||||||||||||    
T  34158057 agggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgnaaa-aaaaaaaattagattccgtccttgt-aaaatgaagatt 34158154  T
Q  243 cttcaagattgc 254  Q
    ||||||||||||    
T  34158155 cttcaagattgc 34158166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 8174877 - 8174942
Alignment:
Q  138 gattttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||| ||| |||||| ||||||||||||||||||||||  | ||||||||||||  ||||||||    
T  8174877 gatttttgggctaataggtctttaccccctgtaatatagggcatttttggttttgcatcctgtaaa 8174942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 13773029 - 13772973
Alignment:
Q  136 tagattttagggttaatagatctttaccccc-tgtaatataggatacttttggtttt 191  Q
    ||||||| |||||||||||| |||||||||| |||||||||||| |||||| |||||    
T  13773029 tagatttaagggttaatagagctttacccccttgtaatataggacacttttagtttt 13772973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 23161099 - 23161147
Alignment:
Q  144 agggttaatagatctttaccc-cctgtaatataggatacttttggtttt 191  Q
    ||||||||||| ||||||||| ||||||||||||| |||||||||||||    
T  23161099 agggttaataggtctttaccctcctgtaatataggttacttttggtttt 23161147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 44568844 - 44568880
Alignment:
Q  141 tttagggttaatagatctttaccccctgtaatatagg 177  Q
    |||| ||||||||||||||||||||||||||||||||    
T  44568844 tttaaggttaatagatctttaccccctgtaatatagg 44568880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 8176029 - 8175970
Alignment:
Q  144 agggttaatagatctttac-cccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||||||  ||||| ||||||||||||| | ||||||||||||||| ||||||||    
T  8176029 agggttaatagagttttactcccctgtaatataaggtacttttggttttgccccctgtaa 8175970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 13279479 - 13279416
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||| |||||||||| ||||||||||||||||||||||  | ||| |||||| | |||||||||    
T  13279479 tttttgggttaataggtctttaccccctgtaatataggtcattttcggtttttccccctgtaaa 13279416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 19272507 - 19272460
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    ||||||||||| ||||||||||||||||||||||  | ||||||||||    
T  19272507 agggttaataggtctttaccccctgtaatataggtcatttttggtttt 19272460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 42509096 - 42509037
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||   ||||||| ||||||||||||  |||||||||||||| |||||||||    
T  42509096 agggttaatagtgttttaccctctgtaatatagggcacttttggttttgccccctgtaaa 42509037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 11058234 - 11058169
Alignment:
Q  140 ttttagggttaatagatctttaccccc--tgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||| ||||  |||||||||  ||||||||||| |||||||||||||||  ||||||||    
T  11058234 ttttagggttactagagttttaccccccctgtaatatagggtacttttggttttgcctcctgtaaa 11058169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 23784578 - 23784616
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatatagg 177  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  23784578 atttaagggttaataggtctttaccccctgtaatatagg 23784616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 48896481 - 48896527
Alignment:
Q  147 gttaatagatctttaccccctgtaatataggatacttttggttttgc 193  Q
    |||||||| |||||||| |||||||||||||  ||||||||||||||    
T  48896481 gttaataggtctttacctcctgtaatataggtcacttttggttttgc 48896527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 1492753 - 1492818
Alignment:
Q  138 gattttagggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaa 202  Q
    |||||||||||||||||  |||||||||| |||||||||||  | |||||||||| | ||||||||    
T  1492753 gattttagggttaatagtgctttacccccttgtaatataggtcatttttggttttcccccctgtaa 1492818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 1589403 - 1589444
Alignment:
Q  162 ccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||||||  |||||||||||||| |||||||||    
T  1589403 ccccctgtaatataggtcacttttggttttgccccctgtaaa 1589444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 6269527 - 6269560
Alignment:
Q  144 agggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||| ||||||||||||||||||||||    
T  6269527 agggttaataggtctttaccccctgtaatatagg 6269560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 9915650 - 9915683
Alignment:
Q  144 agggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||| ||||||||||||||||||||||    
T  9915650 agggttaataggtctttaccccctgtaatatagg 9915683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 9923562 - 9923595
Alignment:
Q  144 agggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||| ||||||||||||||||||||||    
T  9923562 agggttaataggtctttaccccctgtaatatagg 9923595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 14554508 - 14554447
Alignment:
Q  142 ttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||||  |||||||||||||||||||||  | |||| ||||| | |||||||||    
T  14554508 ttagggttaataggcctttaccccctgtaatataggtcattttttgttttcccccctgtaaa 14554447  T

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Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 35891010 - 35891067
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    |||||||||||  |||||||||||||||||| | ||||||||| ||||| | ||||||    
T  35891010 gggttaatagagttttaccccctgtaatataaggtacttttggatttgccctctgtaa 35891067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 176
Target Start/End: Complemental strand, 35913343 - 35913310
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatatag 176  Q
    |||||||||||| |||||||||||||||||||||    
T  35913343 tagggttaataggtctttaccccctgtaatatag 35913310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 38193256 - 38193219
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatatagg 177  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  38193256 tttttgggttaataggtctttaccccctgtaatatagg 38193219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 5219095 - 5219035
Alignment:
Q  144 agggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||  |||||||||| |||||||||||  ||||||| |||||| |||||||||    
T  5219095 agggttaataggcctttacccccctgtaatataggtcacttttgattttgccccctgtaaa 5219035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 11056728 - 11056788
Alignment:
Q  144 agggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||| |||||||||| |||||||||| |  |||||||||||||| || ||||||    
T  11056728 agggttaataggtctttacccccctgtaatataaggcacttttggttttgccccttgtaaa 11056788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 13286928 - 13286864
Alignment:
Q  140 ttttagggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||||| ||||||||||| |||||||||||  | || ||||||| | |||||||||    
T  13286928 ttttagggttaataggtctttacccccttgtaatataggtcatttctggttttcccccctgtaaa 13286864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 23371449 - 23371481
Alignment:
Q  145 gggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||| ||||||||||||||||||||||    
T  23371449 gggttaataggtctttaccccctgtaatatagg 23371481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Complemental strand, 39580223 - 39580191
Alignment:
Q  145 gggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||| ||||||||||||||||||||||    
T  39580223 gggttaataggtctttaccccctgtaatatagg 39580191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 47160493 - 47160553
Alignment:
Q  144 agggttaatagatcttta-ccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||| | |||||| |||||||||||||||| ||||||| |||||| ||||| ||||    
T  47160493 agggttaatgggtctttagccccctgtaatataggttacttttagttttgttccctataaa 47160553  T

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Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 254
Target Start/End: Complemental strand, 27164714 - 27164607
Alignment:
Q  146 ggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagattctt 245  Q
    ||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||           ||||||||| ||||| |||||||||||||||    
T  27164714 ggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaaaattttttttttagattccgtccttgt-aaaatgaagattctt 27164616  T
Q  246 caagattgc 254  Q
    |||||||||    
T  27164615 caagattgc 27164607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 254
Target Start/End: Complemental strand, 39810147 - 39810035
Alignment:
Q  142 ttagggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaaga 240  Q
    ||||||||||||| ||||||||||| |||||||||||  |||||||||||||| |||||||||           ||||||||| ||||| ||||||||||    
T  39810147 ttagggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaattattttttttagattccgtccttgt-aaaatgaaga 39810049  T
Q  241 ttcttcaagattgc 254  Q
    ||||||||||||||    
T  39810048 ttcttcaagattgc 39810035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 2270348 - 2270290
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||| ||||||||||||||| ||||||  |||||||||||||| |||||||||    
T  2270348 gggttaataggtctttaccccctgtattataggtcacttttggttttgccccctgtaaa 2270290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 27163115 - 27163225
Alignment:
Q  144 agggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagatt 242  Q
    ||||||||||| |||||||||| ||||||||||||  |||||||||||||  |||||||||           ||||||||| ||||| ||||||||||||    
T  27163115 agggttaataggtctttacccccctgtaatatagggcacttttggttttggcccctgtaaaaaaatttttttagattccgtccttgt-aaaatgaagatt 27163213  T
Q  243 cttcaagattgc 254  Q
    ||||||||||||    
T  27163214 cttcaagattgc 27163225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 39513865 - 39513925
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||   ||||||||||||||||||||  |||||||||||||| |||||||||    
T  39513865 tagggttaataggcatttaccccctgtaatataggtcacttttggttttgccccctgtaaa 39513925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 39808649 - 39808756
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagattct 244  Q
    |||||||||| |||||||||| |||||||||||  |||||||||||||| |||||||||           |||||| || ||||| ||||||||||||||    
T  39808649 gggttaataggtctttacccc-tgtaatatagggcacttttggttttgccccctgtaaaaaaaaaaatttagattctgtccttgt-aaaatgaagattct 39808746  T
Q  245 tcaagattgc 254  Q
    ||||||||||    
T  39808747 tcaagattgc 39808756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 14329658 - 14329599
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||| ||||||||||||||||||||||  | ||| |||||| |||||||||||    
T  14329658 agggttaataggtctttaccccctgtaatataggtcattttcggttttcctccctgtaaa 14329599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 40702068 - 40702009
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||  |||||||||||||||||||||  |||||| ||||||| |||||||||    
T  40702068 agggttaataggcctttaccccctgtaatataggtcacttttcgttttgccccctgtaaa 40702009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 1600077 - 1600135
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||| |||||||||||||||||||| |  |||||||||||||| |||| ||||    
T  1600077 gggttaataggtctttaccccctgtaatataagccacttttggttttgccccctataaa 1600135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 6105555 - 6105613
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||   |||||||| || ||||||||| ||||||||||||||||||||||||    
T  6105555 gggttaatagtgttttaccccgtgcaatataggacacttttggttttgctccctgtaaa 6105613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 42348961 - 42349019
Alignment:
Q  145 gggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaa 202  Q
    |||||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||    
T  42348961 gggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaa 42349019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 42350236 - 42350126
Alignment:
Q  144 agggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagatt 242  Q
    ||||||||||| ||||||||||| ||||||||||   | |||||||||||| |||||||||           ||||||||| ||||| ||||||||||||    
T  42350236 agggttaataggtctttacccccctgtaatatagagcatttttggttttgccccctgtaaatttttttttttagattccgtccttgt-aaaatgaagatt 42350138  T
Q  243 cttcaagattgc 254  Q
    ||||||||||||    
T  42350137 cttcaagattgc 42350126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 1601671 - 1601732
Alignment:
Q  143 tagggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||| ||||||||| ||||||||||||  |||||||||||||| |||| ||||    
T  1601671 tagggttaatagacctttacccctctgtaatatagggcacttttggttttgccccctataaa 1601732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 12330330 - 12330391
Alignment:
Q  142 ttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||| |||||||||||||||||||||| || || | ||||| | |||||||||    
T  12330330 ttagggttaataggtctttaccccctgtaatataggttatttctagtttttccccctgtaaa 12330391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 31985008 - 31985065
Alignment:
Q  142 ttagggttaatagatctttacc-ccctgtaatataggatacttttggttttgctccct 198  Q
    ||||||||||||| |||||||| ||||||||||||||  |||||||||||||| ||||    
T  31985008 ttagggttaataggtctttacctccctgtaatataggtcacttttggttttgccccct 31985065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 34901515 - 34901560
Alignment:
Q  158 tttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||||||||||  |||||||||||||| |||||||||    
T  34901515 tttaccccctgtaatataggtcacttttggttttgccccctgtaaa 34901560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 34985384 - 34985347
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  34985384 ttttagggttaataggtctttaccccctgtaatatagg 34985347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 27987588 - 27987552
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatatag 176  Q
    ||||||||||||||| |||||||||||||||||||||    
T  27987588 ttttagggttaataggtctttaccccctgtaatatag 27987552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 28044890 - 28044854
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatatag 176  Q
    ||||||||||||||| |||||||||||||||||||||    
T  28044890 ttttagggttaataggtctttaccccctgtaatatag 28044854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 28561435 - 28561479
Alignment:
Q  146 ggttaatagatctttaccccctgtaatataggatacttttggttt 190  Q
    |||||||||| |||||||||||||||||||||  |||||||||||    
T  28561435 ggttaatagagctttaccccctgtaatatagggcacttttggttt 28561479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 28566933 - 28566977
Alignment:
Q  146 ggttaatagatctttaccccctgtaatataggatacttttggttt 190  Q
    |||||||||| |||||||||||||||||||||  |||||||||||    
T  28566933 ggttaatagagctttaccccctgtaatatagggcacttttggttt 28566977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 39451499 - 39451563
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||||||| | |||||||||| ||||||| |  | |||||||||| |||||||||||    
T  39451499 attttagggttaataggtttttaccccctctaatataagtcatttttggttttcctccctgtaaa 39451563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 175
Target Start/End: Complemental strand, 12330621 - 12330590
Alignment:
Q  144 agggttaatagatctttaccccctgtaatata 175  Q
    ||||||||||||||||||||||||||||||||    
T  12330621 agggttaatagatctttaccccctgtaatata 12330590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 29309559 - 29309597
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatatagg 177  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  29309559 atttaagggttaataggtctttaccccctgtaatatagg 29309597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 25277764 - 25277731
Alignment:
Q  144 agggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||| ||||||||||||||||||||||    
T  25277764 agggttaataggtctttaccccctgtaatatagg 25277731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 27543687 - 27543650
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatatagg 177  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  27543687 tttttgggttaataggtctttaccccctgtaatatagg 27543650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 31986287 - 31986227
Alignment:
Q  145 gggttaatagatctttaccccc--tgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||| |||||||||||  |||||||||||  |||||| ||||||| |||||||||    
T  31986287 gggttaataggtctttaccccccgtgtaatataggtcacttttagttttgccccctgtaaa 31986227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 39515182 - 39515121
Alignment:
Q  142 ttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||||  |||||| ||||||||||||||  |||||||||||  | |||||||||    
T  39515182 ttagggttaataggcctttactccctgtaatataggtcacttttggtttgaccccctgtaaa 39515121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Complemental strand, 960554 - 960522
Alignment:
Q  145 gggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||| ||||||||||||||||||||||    
T  960554 gggttaataggtctttaccccctgtaatatagg 960522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 28575174 - 28575122
Alignment:
Q  140 ttttagggttaatagatctttacc-ccctgtaatataggatacttttggtttt 191  Q
    |||||||||||||||  ||||||| ||||||||||||||  ||||||||||||    
T  28575174 ttttagggttaataggactttaccaccctgtaatatagggcacttttggtttt 28575122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 31343661 - 31343601
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||| |  ||||||||| |||||||||||  |||||||||||| | |||||||||    
T  31343661 tagggttaatggtgctttaccccatgtaatataggtcacttttggttttcccccctgtaaa 31343601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 37402478 - 37402530
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    |||||||||||||||   |||||||||||| ||||||||  ||||||||||||    
T  37402478 attttagggttaataagcctttaccccctgcaatataggtcacttttggtttt 37402530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 43400665 - 43400701
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatata 175  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  43400665 atttaagggttaataggtctttaccccctgtaatata 43400701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 254
Target Start/End: Original strand, 10615276 - 10615383
Alignment:
Q  146 ggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagattctt 245  Q
    ||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||           ||||||||| ||||| |||||||||||||||    
T  10615276 ggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaaatttttttttttagattccgtccttgt-aaaatgaagattctt 10615374  T
Q  246 caagattgc 254  Q
    |||||||||    
T  10615375 caagattgc 10615383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 37977564 - 37977505
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  37977564 agggttaataggtctttaccccctgtaatataggacacttttggttttgccccctgtaaa 37977505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 46610009 - 46610117
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagattct 244  Q
    |||||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||            ||||||||| ||||| ||||||||||||||    
T  46610009 gggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaattttttttttttagattccgtccttgt-aaaatgaagattct 46610107  T
Q  245 tcaagattgc 254  Q
    ||||||||||    
T  46610108 tcaagattgc 46610117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 18140939 - 18140998
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||  |||||||||||||||||||||  ||||||||||||||||||||||||    
T  18140939 agggttaataggcctttaccccctgtaatataggtcacttttggttttgctccctgtaaa 18140998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 46597570 - 46597507
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||  ||||||||    
T  46597570 ttttagggttaataggtctttaccccctgtaatatagggcacttttggttttgcctcctgtaaa 46597507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 46596093 - 46596142
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggttttg 192  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  46596093 tagggttaatagagctttaccccctgtaatatagggtacttttggttttg 46596142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 15093773 - 15093713
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||| |||||| |||||||||    
T  15093773 tagggttaatagaactttaccccctataatatagggtacttttgattttgccccctgtaaa 15093713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 18142260 - 18142196
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||| |||||||||||  |||||||||||||||||||||  |||||||||||||| |||||||||    
T  18142260 atttaagggttaataggcctttaccccctgtaatataggtcacttttggttttgccccctgtaaa 18142196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 54567800 - 54567742
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||| ||||||||||||||||||||||  |||||||||||||| |||| ||||    
T  54567800 gggttaataggtctttaccccctgtaatataggtcacttttggttttgccccctataaa 54567742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 10616832 - 10616772
Alignment:
Q  144 agggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||| ||||||||||| |||||||||||  |||||||||||||| |||||||||    
T  10616832 agggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaa 10616772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 15086221 - 15086281
Alignment:
Q  144 agggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||| |||||||||| ||||||||||||  |||||||||||||| |||||||||    
T  15086221 agggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaa 15086281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 24729693 - 24729629
Alignment:
Q  140 ttttagggttaatagatctttac-cccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||||||  |||||| ||||||||||||||| |||||||||||||||  ||||||||    
T  24729693 ttttagggttaataggcctttactcccctgtaatataggttacttttggttttgcctcctgtaaa 24729629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 48044276 - 48044332
Alignment:
Q  147 gttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||| |||||||||||||| |||||||  |||||||||||||| |||||||||    
T  48044276 gttaataggtctttaccccctgtgatatagggcacttttggttttgccccctgtaaa 48044332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 12066223 - 12066277
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatataggatacttttggttttgc 193  Q
    |||||||||||||||| | ||||||||||||||||||||  ||||||| ||||||    
T  12066223 attttagggttaatagttttttaccccctgtaatataggtcacttttgattttgc 12066277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 24910986 - 24910940
Alignment:
Q  147 gttaatagatctttaccccctgtaatataggatacttttggttttgc 193  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||    
T  24910986 gttaatagatctttaccccctgtaatatagatcacttttggttttgc 24910940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 31835899 - 31835841
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||||  |||||||||||||||||||| || ||||||| |||||| ||||||||    
T  31835899 agggttaatatgtctttaccccctgtaatatatgacacttttgattttgccccctgtaa 31835841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 34062399 - 34062337
Alignment:
Q  141 tttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||| || ||||| |||||||||||||||  |||||||||||| | |||||||||    
T  34062399 tttagggttaattgacctttatcccctgtaatataggtcacttttggtttttccccctgtaaa 34062337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 38843610 - 38843548
Alignment:
Q  142 ttagggttaatagatctttaccccct-gtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||| |||| |||||||||| | ||||||||||| |||||||||||||| |||||||||    
T  38843610 ttagggttgataggtctttacccctttgtaatataggacacttttggttttgccccctgtaaa 38843548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 12210028 - 12210076
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgc 193  Q
    |||||||||||  ||||||||||||||||||||  ||||||||||||||    
T  12210028 gggttaatagacttttaccccctgtaatataggtcacttttggttttgc 12210076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 22256201 - 22256261
Alignment:
Q  144 agggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||  |||||||||| |||||||||| || |||||||||||||| |||||||||    
T  22256201 agggttaataagtctttacccccctgtaatatatgacacttttggttttgccccctgtaaa 22256261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 28208207 - 28208155
Alignment:
Q  140 ttttagggttaatagatcttta-ccccctgtaatataggatacttttggtttt 191  Q
    |||||||||||||||| ||||| ||||||||||||||||  ||||||||||||    
T  28208207 ttttagggttaatagagctttacccccctgtaatatagggcacttttggtttt 28208155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 37975968 - 37976028
Alignment:
Q  144 agggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||  |||||||| |||||||||||| ||||||||||||||| |||| ||||    
T  37975968 agggttaatagagttttacccccctgtaatatagggtacttttggttttgccccctataaa 37976028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 49873010 - 49872974
Alignment:
Q  141 tttagggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||||||| ||||||||||||||||||||||    
T  49873010 tttagggttaataggtctttaccccctgtaatatagg 49872974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 7248864 - 7248923
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||  ||||||||||||||||||||   | |||||||||||| |||||||||    
T  7248864 agggttaataggcctttaccccctgtaatatagatcatttttggttttgccccctgtaaa 7248923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 11761077 - 11761140
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||| |  |||||||||||||||||||||  | |||||||||| |||||| ||||    
T  11761077 ttttagggttaatggtgctttaccccctgtaatataggtcatttttggttttcctccctataaa 11761140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 25110119 - 25110060
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||| ||||||| ||||||||||||||  | ||| |||||| |||||||||||    
T  25110119 agggttaataggtctttacaccctgtaatataggtcattttcggttttcctccctgtaaa 25110060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 54012646 - 54012587
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||| |  |||||||||||||||||||||  | |||||||||| |||||||||||    
T  54012646 agggttaatggtgctttaccccctgtaatataggtcatttttggttttcctccctgtaaa 54012587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 54566506 - 54566568
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    |||| |||||||||||| ||||||||| |||||||||||  |||||||||||||  ||||||||    
T  54566506 atttaagggttaatagacctttacccc-tgtaatataggtcacttttggttttgtcccctgtaa 54566568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 4218923 - 4218865
Alignment:
Q  146 ggttaatagatctttaccccctg-taatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||  |||||||||||| |||||||||  |||||||||||||| |||||||||    
T  4218923 ggttaataggcctttaccccctggtaatataggtcacttttggttttgccccctgtaaa 4218865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Original strand, 6510213 - 6510247
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||||| ||||||||||||||||||||||    
T  6510213 tagggttaataggtctttaccccctgtaatatagg 6510247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 27521521 - 27521579
Alignment:
Q  146 ggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||| ||||||||||| ||||||||||| || |||||||||| | |||||||||    
T  27521521 ggttaataggtctttacccccgtgtaatataggttatttttggttttcccccctgtaaa 27521579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 28206979 - 28207041
Alignment:
Q  142 ttagggttaatagatctttaccc-cctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||||  |||||||| |||||||||||||  |||||||||||| | |||||||||    
T  28206979 ttagggttaatagggctttaccctcctgtaatatagggcacttttggttttcccccctgtaaa 28207041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 29185038 - 29184980
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||  |||||| ||||||||||||||  ||||||||||||||  ||||||||    
T  29185038 gggttaataggcctttactccctgtaatataggtcacttttggttttgcctcctgtaaa 29184980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 1351531 - 1351478
Alignment:
Q  138 gattttagggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    ||||||||||||||| |  |||||||||||||||||||||  | ||||||||||    
T  1351531 gattttagggttaatggtgctttaccccctgtaatataggtcatttttggtttt 1351478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 36867915 - 36867882
Alignment:
Q  144 agggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||||||||||||||||| |||||||||    
T  36867915 agggttaatagatctttaccccctataatatagg 36867882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 47115624 - 47115587
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatatagg 177  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  47115624 tttttgggttaataggtctttaccccctgtaatatagg 47115587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 51460821 - 51460788
Alignment:
Q  144 agggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||| ||||||||||||||||||||||    
T  51460821 agggttaataggtctttaccccctgtaatatagg 51460788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 14826134 - 14826074
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||   |||||||||||||||||  |  |||||||||||||| |||||||||    
T  14826134 tagggttaatagtgttttaccccctgtaatatttgtcacttttggttttgccccctgtaaa 14826074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 18704952 - 18705012
Alignment:
Q  144 agggttaatagatctttaccccct-gtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||| ||||||||||  ||||||||||  |||||||||||| | |||||||||    
T  18704952 agggttaatagagctttaccccccagtaatatagggcacttttggttttcccccctgtaaa 18705012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 176
Target Start/End: Complemental strand, 20957227 - 20957195
Alignment:
Q  144 agggttaatagatctttaccccctgtaatatag 176  Q
    ||||||||||| |||||||||||||||||||||    
T  20957227 agggttaataggtctttaccccctgtaatatag 20957195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 33898331 - 33898283
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    |||||||||| |  ||||||||||||||||||||| || ||||||||||    
T  33898331 tagggttaatggtgctttaccccctgtaatataggttatttttggtttt 33898283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 34061338 - 34061402
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||| ||||||||  ||||||| ||||||||||||  |||||| ||||| ||| |||||||    
T  34061338 attttaggattaatagacatttaccctctgtaatataggtcactttttgttttcctctctgtaaa 34061402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 39846643 - 39846591
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    |||||||||||||| |  |||||||||||||||||||||  | ||||||||||    
T  39846643 attttagggttaatggtgctttaccccctgtaatataggtcatttttggtttt 39846591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 45291434 - 45291478
Alignment:
Q  159 ttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||||||||||  |||||||||||||| || ||||||    
T  45291434 ttaccccctgtaatataggtcacttttggttttgccccttgtaaa 45291478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Complemental strand, 49880794 - 49880762
Alignment:
Q  145 gggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||| ||||||||||||||||||||||    
T  49880794 gggttaataggtctttaccccctgtaatatagg 49880762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 24234328 - 24234438
Alignment:
Q  144 agggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagatt 242  Q
    ||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||||           ||||||||| ||||| ||||||||||||    
T  24234328 agggttaataggtctttacccccctgtaatataggacacttttggttttgccccctgtaaaaaaaaaaatttagattccgtccttgt-aaaatgaagatt 24234426  T
Q  243 cttcaagattgc 254  Q
    ||||||||||||    
T  24234427 cttcaagattgc 24234438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 14328703 - 14328645
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||    
T  14328703 gggttaataggtctttaccccctgtaatataggtcacttttggttttgccccctgtaaa 14328645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 14421713 - 14421655
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||    
T  14421713 gggttaataggtctttaccccctgtaatataggtcacttttggttttgccccctgtaaa 14421655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 34762178 - 34762240
Alignment:
Q  141 tttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||| |||||| |||||||| |||||||||||||  ||||||||||||||||||||||||    
T  34762178 tttagggctaataggtctttacctcctgtaatatagggcacttttggttttgctccctgtaaa 34762240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 22058336 - 22058227
Alignment:
Q  145 gggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagattc 243  Q
    |||||||||| ||||||||||| |||||||||||  |||||||||||||| |||||||||           ||||||||| ||||| |||||||||||||    
T  22058336 gggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaattcttttttttagattccgtccttgt-aaaatgaagattc 22058238  T
Q  244 ttcaagattgc 254  Q
    |||||||||||    
T  22058237 ttcaagattgc 22058227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 24235689 - 24235579
Alignment:
Q  144 agggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagatt 242  Q
    ||||||||||| |||||||||| ||||||||||||  |||||||||||||| |||||||||           |||||| || ||||| ||||||||||||    
T  24235689 agggttaataggtctttacccctctgtaatatagggcacttttggttttgccccctgtaaaaatttatttttagattctgtccttgt-aaaatgaagatt 24235591  T
Q  243 cttcaagattgc 254  Q
    ||||||||||||    
T  24235590 cttcaagattgc 24235579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 3063541 - 3063492
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgc 193  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  3063541 agggttaataggtctttaccccctgtaatataggtcacttttggttttgc 3063492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 22056482 - 22056591
Alignment:
Q  145 gggttaatagatctttacc-ccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagattc 243  Q
    |||||||||| |||||| | ||||||||||||||  |||||||||||||| |||||||||           ||||||||| ||||| |||||||||||||    
T  22056482 gggttaataggtctttaactccctgtaatatagggcacttttggttttgccccctgtaaatttttttttttagattccgtccttgt-aaaatgaagattc 22056580  T
Q  244 ttcaagattgc 254  Q
    |||||||||||    
T  22056581 ttcaagattgc 22056591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 33485135 - 33485074
Alignment:
Q  143 tagggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||| ||| |||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  33485135 tagggttaacagagctttacccccctgtaatatagggtacttttggttttgccccctgtaaa 33485074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 56171 - 56112
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    |||||||||||| ||||||||||||||||||||||  ||||||| |||||  ||||||||    
T  56171 tagggttaataggtctttaccccctgtaatatagggcacttttgattttgtcccctgtaa 56112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 6000733 - 6000682
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    |||||||||||||||| ||||||||||||||||||||   ||||||||||||    
T  6000733 ttttagggttaatagagctttaccccctgtaatatagagcacttttggtttt 6000682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 12321561 - 12321620
Alignment:
Q  144 agggttaatagatcttta-ccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||||| |||||| |||||||||||||||| |||||||||||||||  |||||||    
T  12321561 agggttaataggtctttatccccctgtaatatagggtacttttggttttgcctcctgtaa 12321620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 33483696 - 33483755
Alignment:
Q  145 gggttaatagatctttacc-ccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||| |||||||| ||||||||||||||| |||||||||||||| | |||||||    
T  33483696 gggttaataggtctttaccaccctgtaatataggacacttttggttttgccctctgtaaa 33483755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 14327361 - 14327427
Alignment:
Q  137 agattttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||| | |||||||||  ||||||||||||||||||| |  |||||||||||||| |||||||||    
T  14327361 agatttaaaggttaataggcctttaccccctgtaatatacgtcacttttggttttgccccctgtaaa 14327427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 14420371 - 14420437
Alignment:
Q  137 agattttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||| | |||||||||  ||||||||||||||||||| |  |||||||||||||| |||||||||    
T  14420371 agatttaaaggttaataggcctttaccccctgtaatatacgtcacttttggttttgccccctgtaaa 14420437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 12322861 - 12322802
Alignment:
Q  144 agggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||||| ||||||||||| |||||||||||  ||||||| |||||| ||||||||    
T  12322861 agggttaataggtctttacccccctgtaatatagggcacttttgattttgccccctgtaa 12322802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 24914456 - 24914547
Alignment:
Q  162 ccccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagattcttcaagattgc 254  Q
    ||||||||||||||||| ||||||| |||||| ||||||||            ||||||||| ||||| ||||||||||||||||||||||||    
T  24914456 ccccctgtaatataggacacttttgattttgccccctgtaattttttttttttagattccgtccttgt-aaaatgaagattcttcaagattgc 24914547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 54807 - 54864
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||| ||||| || |||||||||||||| |||||||||||||  |||||||||    
T  54807 gggttaataggtcttt-cctcctgtaatataggacacttttggttttgtcccctgtaaa 54864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 19412402 - 19412448
Alignment:
Q  157 ctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||||||||||| || |||||||||| | |||||||||    
T  19412402 ctttaccccctgtaatataggttatttttggttttcccccctgtaaa 19412448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 29942506 - 29942468
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatatagg 177  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  29942506 atttaagggttaataggtctttaccccctgtaatatagg 29942468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 24387827 - 24387786
Alignment:
Q  136 tagattttagggttaatagatctttaccccctgtaatatagg 177  Q
    |||| ||| |||||||||| ||||||||||||||||||||||    
T  24387827 tagaattttgggttaataggtctttaccccctgtaatatagg 24387786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 30409732 - 30409671
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgt 200  Q
    ||||||||||||||||  ||||||| |||| ||||||||  |||||||||||| | ||||||    
T  30409732 attttagggttaataggcctttacctcctgcaatataggtcacttttggttttcccccctgt 30409671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 5999715 - 5999763
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    ||||||||||||| ||||||||||| |||||||||  | ||||||||||    
T  5999715 tagggttaatagagctttaccccctctaatatagggcatttttggtttt 5999763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 9234811 - 9234847
Alignment:
Q  141 tttagggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||||||||  ||||||||||||||||||||    
T  9234811 tttagggttaatagagttttaccccctgtaatatagg 9234847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 10344050 - 10344082
Alignment:
Q  145 gggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||| ||||||||||||||||||||||    
T  10344050 gggttaataggtctttaccccctgtaatatagg 10344082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 13114398 - 13114430
Alignment:
Q  145 gggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||| ||||||||||||||||||||||    
T  13114398 gggttaataggtctttaccccctgtaatatagg 13114430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 13114680 - 13114624
Alignment:
Q  147 gttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||| |||||||||||||||||||| |  | ||| |||||| |||||||||||    
T  13114680 gttaataggtctttaccccctgtaatatatgtcattttcggttttcctccctgtaaa 13114624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 176
Target Start/End: Complemental strand, 22574088 - 22574056
Alignment:
Q  144 agggttaatagatctttaccccctgtaatatag 176  Q
    ||||||||||| |||||||||||||||||||||    
T  22574088 agggttaataggtctttaccccctgtaatatag 22574056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 26644748 - 26644700
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    |||||||||||| ||||| |||| |||||||||||  ||||||||||||    
T  26644748 tagggttaataggtcttttccccttgtaatataggtcacttttggtttt 26644700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 26750714 - 26750666
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    |||||||||||| ||||| |||| |||||||||||  ||||||||||||    
T  26750714 tagggttaataggtcttttccccttgtaatataggtcacttttggtttt 26750666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 30381567 - 30381623
Alignment:
Q  146 ggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||| |||||| ||||||||||||||| || ||| |||||| ||| ||||||    
T  30381567 ggttaataggtctttatcccctgtaatataggttattttcggttttcctcactgtaa 30381623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 30953882 - 30953810
Alignment:
Q  131 ctttttagattttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||  |||||| ||||||||   |||| ||| ||||||||| || |||||||||||| |||||||||||    
T  30953882 ctttttattttttagagttaatagggttttatcccatgtaatatatgaaacttttggttttactccctgtaaa 30953810  T

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Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 254
Target Start/End: Complemental strand, 38937567 - 38937457
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagatt 242  Q
    |||||||||||| ||||||||||||||||||||||  |||||||||||||| |||| ||||           ||||||||| ||||| ||||||||||||    
T  38937567 tagggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctataaaaaaaaaaaattagattccgtccttgt-aaaatgaagatt 38937469  T
Q  243 cttcaagattgc 254  Q
    ||||||||||||    
T  38937468 cttcaagattgc 38937457  T

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Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 15747744 - 15747809
Alignment:
Q  138 gattttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||| |||||||||||| |||||||||||||||||||||  ||||||||||||| ||||||||||    
T  15747744 gatttaagggttaatagacctttaccccctgtaatataggtcacttttggttttgttccctgtaaa 15747809  T

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Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 254
Target Start/End: Original strand, 1902928 - 1903039
Alignment:
Q  143 tagggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagat 241  Q
    |||||||||||| |||||||||| ||||||||||||  |||||||||||||| |||||||||           ||||||||| ||||| |||||||||||    
T  1902928 tagggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaaattttttttttagattccgtccttgt-aaaatgaagat 1903026  T
Q  242 tcttcaagattgc 254  Q
    |||||||||||||    
T  1903027 tcttcaagattgc 1903039  T

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Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 7576325 - 7576434
Alignment:
Q  145 gggttaatagatcttta-ccccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagattc 243  Q
    |||||||||| |||||| ||||||||||||||||  |||||||||||||| |||||||||           ||||||||| ||||| |||||||||||||    
T  7576325 gggttaataggtctttatccccctgtaatatagggcacttttggttttgccccctgtaaaatattttttttagattccgtccttgt-aaaatgaagattc 7576423  T
Q  244 ttcaagattgc 254  Q
    |||||||||||    
T  7576424 ttcaagattgc 7576434  T

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Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 254
Target Start/End: Complemental strand, 1904469 - 1904357
Alignment:
Q  142 ttagggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaaga 240  Q
    ||||||||||||| ||||||||||| |||||||||||  |||||||||||||| |||||| ||           ||||||||| ||||| ||||||||||    
T  1904469 ttagggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtgaaaaaaaatttttagattccgtccttgt-aaaatgaaga 1904371  T
Q  241 ttcttcaagattgc 254  Q
    ||||||||||||||    
T  1904370 ttcttcaagattgc 1904357  T

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Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 16670500 - 16670556
Alignment:
Q  146 ggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||    
T  16670500 ggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaa 16670556  T

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Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 38935945 - 38936052
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagattct 244  Q
    |||||||||| |||||||||| |||||||||||| |||||||||||||| | |||||||           ||||||||| ||||| ||||||||||||||    
T  38935945 gggttaataggtctttacccc-tgtaatataggacacttttggttttgcccactgtaaaaaaaaaaatttagattccgtccttgt-aaaatgaagattct 38936042  T
Q  245 tcaagattgc 254  Q
    ||||||||||    
T  38936043 tcaagattgc 38936052  T

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Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 23835830 - 23835771
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||| ||||||||||||||||||||||  |||||| ||||||| |||||||||    
T  23835830 agggttaataggtctttaccccctgtaatatagggcacttttagttttgccccctgtaaa 23835771  T

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Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 5969725 - 5969783
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||| ||||| ||||||||||||||| |||||||||||||||  ||||||||    
T  5969725 gggttaatagagctttatcccctgtaatatagggtacttttggttttgcctcctgtaaa 5969783  T

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Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 28141691 - 28141745
Alignment:
Q  148 ttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||||||||||||||||||||||||  |||||||||||| | ||||||||    
T  28141691 ttaatagatctttaccccctgtaatataggtcacttttggttttacaccctgtaa 28141745  T

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Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 34635697 - 34635738
Alignment:
Q  136 tagattttagggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  34635697 tagattttagggttaataggtctttaccccctgtaatatagg 34635738  T

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Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 44366867 - 44366976
Alignment:
Q  145 gggttaatagatctttacc-ccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagattc 243  Q
    |||||||||| |||||| | ||||||||||||||  |||||||||||||| |||||||||           ||||||||| ||||| |||||||||||||    
T  44366867 gggttaataggtctttaactccctgtaatatagggcacttttggttttgccccctgtaaatttttttttttagattccgtccttgt-aaaatgaagattc 44366965  T
Q  244 ttcaagattgc 254  Q
    |||||||||||    
T  44366966 ttcaagattgc 44366976  T

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Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 16577410 - 16577359
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatataggatacttttggttt 190  Q
    |||||||||||||||| |||||||||||||||||||||| || || ||||||    
T  16577410 attttagggttaataggtctttaccccctgtaatataggttatttctggttt 16577359  T

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Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 23834580 - 23834639
Alignment:
Q  144 agggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||    
T  23834580 agggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaa 23834639  T

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Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 175
Target Start/End: Complemental strand, 38625197 - 38625162
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatata 175  Q
    ||||||||||||||||||||||||||||||||||||    
T  38625197 ttttagggttaatagatctttaccccctgtaatata 38625162  T

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Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 7577835 - 7577725
Alignment:
Q  144 agggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagatt 242  Q
    ||||||||||| ||||||||||| |||||||||||  |||||||||||| | |||||||||           ||||||||| ||||| ||||||||||||    
T  7577835 agggttaataggtctttacccccctgtaatatagggcacttttggttttaccccctgtaaatttttttttttagattccgtccttgt-aaaatgaagatt 7577737  T
Q  243 cttcaagattgc 254  Q
    | ||||||||||    
T  7577736 catcaagattgc 7577725  T

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Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 19686237 - 19686183
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccct 198  Q
    |||||||||||  |||||||||||||||||||||  |||||||||||||| ||||    
T  19686237 agggttaatagtgctttaccccctgtaatatagggcacttttggttttgccccct 19686183  T

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Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 31551903 - 31551965
Alignment:
Q  139 attttagggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgt 200  Q
    ||||||||||||||||| |||||||||| ||||||||||   |||||||||||| ||||||||    
T  31551903 attttagggttaatagagctttacccccttgtaatatagagcacttttggttttcctccctgt 31551965  T

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Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 254
Target Start/End: Complemental strand, 38877080 - 38876970
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaagatt 242  Q
    ||||||||||||  ||||||||||||||||||| |  |||||||||||| || ||||||||           ||||||||| ||||| ||||| ||||||    
T  38877080 tagggttaatagggctttaccccctgtaatataaggcacttttggttttccttcctgtaaatttttttttttagattccgtccttgt-aaaataaagatt 38876982  T
Q  243 cttcaagattgc 254  Q
    ||||||||||||    
T  38876981 cttcaagattgc 38876970  T

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Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 22468284 - 22468223
Alignment:
Q  143 tagggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||  |||||||||| |||||||||||  |||||||||||||| |||||||||    
T  22468284 tagggttaataggcctttacccccctgtaatataggtcacttttggttttgccccctgtaaa 22468223  T

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Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 22474505 - 22474444
Alignment:
Q  143 tagggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||  |||||||||| |||||||||||  |||||||||||||| |||||||||    
T  22474505 tagggttaataggcctttacccccctgtaatataggtcacttttggttttgccccctgtaaa 22474444  T

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Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 28462552 - 28462492
Alignment:
Q  144 agggttaatagatcttta-ccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||  ||||| ||||||||||||||||  |||||||||||||| |||||||||    
T  28462552 agggttaataggcctttatccccctgtaatataggtcacttttggttttgcaccctgtaaa 28462492  T

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Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 30371383 - 30371443
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||| ||||||| ||||||||||||||  | |||||||||| | |||||||||    
T  30371383 tagggttaataggtctttactccctgtaatataggtcatttttggttttcccccctgtaaa 30371443  T

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Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 39150223 - 39150282
Alignment:
Q  142 ttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    |||||||||||||  | ||||||||||||||||||||  ||||||||||||| ||||||||    
T  39150223 ttagggttaatagtgcattaccccctgtaatataggactcttttggttttgc-ccctgtaa 39150282  T

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Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 44242418 - 44242354
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||| ||||||||||  ||||||| ||||||||||||   |||||||||||||| |||||||||    
T  44242418 atttttgggttaataggcctttacctcctgtaatatagatcacttttggttttgccccctgtaaa 44242354  T

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Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 5970810 - 5970764
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttg 192  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  5970810 gggttaataggtctttacccc-tgtaatatagggtacttttggttttg 5970764  T

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Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 30371664 - 30371621
Alignment:
Q  134 tttagattttagggttaatagatctttaccccctgtaatatagg 177  Q
    |||| ||||||| |||||||| ||||||||||||||||||||||    
T  30371664 tttacattttagagttaataggtctttaccccctgtaatatagg 30371621  T

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Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 36565235 - 36565294
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||| |||||  ||||||||||||  | |||||||||||| |||||||||||    
T  36565235 agggttaatagagctttattccctgtaatataaaacacttttggttttcctccctgtaaa 36565294  T

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Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 8237988 - 8238046
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    |||||||||||   |||||||| |||||||||| | |||||||||||||| ||||||||    
T  8237988 agggttaatagtgttttaccccatgtaatatagaacacttttggttttgccccctgtaa 8238046  T

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Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Complemental strand, 19493507 - 19493473
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||||| ||||||||||||||||||||||    
T  19493507 tagggttaataggtctttaccccctgtaatatagg 19493473  T

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Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 19684215 - 19684261
Alignment:
Q  157 ctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||||||||| || |||||||||||||  |||||||||    
T  19684215 ctttaccccctgtaatatatgacacttttggttttgtcccctgtaaa 19684261  T

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Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Original strand, 22116153 - 22116187
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||||| ||||||||||||||||||||||    
T  22116153 tagggttaataggtctttaccccctgtaatatagg 22116187  T

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Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 22466982 - 22467040
Alignment:
Q  146 ggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||| |||||||||| ||||||||||||  |||||||||||||  |||||||||    
T  22466982 ggttaataggtctttacccccctgtaatataggtcacttttggttttgtcccctgtaaa 22467040  T

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Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 29835096 - 29835134
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatatagg 177  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  29835096 atttttgggttaataggtctttaccccctgtaatatagg 29835134  T

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Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 17328091 - 17328124
Alignment:
Q  144 agggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||| ||||||||||||||||||||||    
T  17328091 agggttaataggtctttaccccctgtaatatagg 17328124  T

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Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 28461065 - 28461125
Alignment:
Q  142 ttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||   ||||||||||||||||||||| | ||||||||||||  |||||||||    
T  28461065 ttagggttaataagcctttaccccctgtaatatagg-tccttttggttttggcccctgtaaa 28461125  T

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Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 28484652 - 28484591
Alignment:
Q  142 ttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||| ||||||| ||||||| ||||||||||||||  | |||||||||| | |||||||||    
T  28484652 ttaggattaataggtctttactccctgtaatataggtcatttttggttttccgccctgtaaa 28484591  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 254
Target Start/End: Complemental strand, 38815155 - 38815042
Alignment:
Q  140 ttttagggttaatagatctttac-cccctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaa 238  Q
    |||| |||||||||| ||||||| ||||||||||||| |  |||||||||||||| | |||||||           ||||||||| ||||| ||||||||    
T  38815155 tttttgggttaataggtctttactcccctgtaatataaggcacttttggttttgccctctgtaaa-aaaaaaatttagattccgtccttgt-aaaatgaa 38815058  T
Q  239 gattcttcaagattgc 254  Q
    ||||||||||||||||    
T  38815057 gattcttcaagattgc 38815042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 38876006 - 38876047
Alignment:
Q  162 ccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||||||| |||||||||||| | |||||||||    
T  38876006 ccccctgtaatataggacacttttggtttttccccctgtaaa 38876047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 18555870 - 18555834
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatata 175  Q
    |||||||||||||||| |||||| |||||||||||||    
T  18555870 attttagggttaataggtctttatcccctgtaatata 18555834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 19641446 - 19641478
Alignment:
Q  145 gggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||| ||||||||||||||||||||||    
T  19641446 gggttaataggtctttaccccctgtaatatagg 19641478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 19840039 - 19840071
Alignment:
Q  145 gggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||| ||||||||||||||||||||||    
T  19840039 gggttaataggtctttaccccctgtaatatagg 19840071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 32845725 - 32845661
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||||| |  |||||||||||||||||||||  | |||| ||||| | |||||||||    
T  32845725 attttagggttaatggtgctttaccccctgtaatataggtcattttttgttttcccccctgtaaa 32845661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 33441502 - 33441550
Alignment:
Q  142 ttagggttaatagatctttaccccctgtaatataggatacttttggttt 190  Q
    ||||||||||| |  ||||||||||||||||||||| || |||||||||    
T  33441502 ttagggttaatggtgctttaccccctgtaatataggttatttttggttt 33441550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 37147551 - 37147583
Alignment:
Q  145 gggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||| ||||||||||||||||||||||    
T  37147551 gggttaataggtctttaccccctgtaatatagg 37147583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 38386218 - 38386170
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    |||||||||||  |||||| ||||||||||||||| || ||||||||||    
T  38386218 tagggttaatatgtctttatcccctgtaatataggttatttttggtttt 38386170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 3913 - 3972
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||||    
T  3913 agggttaataggtctttaccccctgtaatgtaggacacttttggttttgccccctgtaaa 3972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 5016 - 4955
Alignment:
Q  144 agggttaatagatctttaccccc--tgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||  |||||||||||  |||||||||||  |||||||||||||| |||||||||    
T  5016 agggttaataagtctttaccccccctgtaatataggtcacttttggttttgccccctgtaaa 4955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 8077 - 8140
Alignment:
Q  140 ttttagggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||||    
T  8077 ttttagggttaataggtctttacccccctgtaatataggacacttttggttttgc-ccctgtaaa 8140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 15659 - 15722
Alignment:
Q  140 ttttagggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||||    
T  15659 ttttagggttaataggtctttacccccctgtaatataggacacttttggttttgc-ccctgtaaa 15722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 25611 - 25674
Alignment:
Q  140 ttttagggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||||    
T  25611 ttttagggttaataggtctttacccccctgtaatataggacacttttggttttgc-ccctgtaaa 25674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 350 - 286
Alignment:
Q  140 ttttagggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||||| ||||||||||| |||||||||||  |||||||||||||| |||||||||    
T  350 ttttagggttaataggtctttacccccatgtaatatagggcacttttggttttgccccctgtaaa 286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 10079 - 10138
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||| ||||||||||||||||||||||  |||||| ||||||| |||||||||    
T  10079 agggttaataggtctttaccccctgtaatatagggcacttttagttttgccccctgtaaa 10138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 11628 - 11567
Alignment:
Q  143 tagggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||| |||||||||| |||||||||   ||||||||||||||| |||||||||    
T  11628 tagggttaatagagctttacccccctgtaatatatagtacttttggttttgccccctgtaaa 11567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 254
Target Start/End: Original strand, 4702 - 4816
Alignment:
Q  140 ttttagggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaaannnnnnnnnnnagattccgttcttgtaaaaatgaa 238  Q
    ||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||  ||||||||           ||||||||| ||||| ||||||||    
T  4702 ttttagggttaataggtctttacccccctgtaatatagggcacttttggttttgcctcctgtaaaaaaaaaaaattagattccgtccttgt-aaaatgaa 4800  T
Q  239 gattcttcaagattgc 254  Q
    ||||||||| ||||||    
T  4801 gattcttcacgattgc 4816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 64503 - 64561
Alignment:
Q  145 gggttaatagatctttacccc-ctgtaatataggatacttttggttttgctccctgtaa 202  Q
    |||||||||| |||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  64503 gggttaataggtctttacccccctgtaatatagggtacttttggttttgccccctgtaa 64561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 66104 - 66042
Alignment:
Q  142 ttagggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||| ||||||||||| ||||||||| || |||||||||||||| |||||||||    
T  66104 ttagggttaataggtctttacccccctgtaatatatgacacttttggttttgccccctgtaaa 66042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 4217 - 4176
Alignment:
Q  136 tagattttagggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  4217 tagattttagggttaataggtctttaccccctgtaatatagg 4176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 35596 - 35657
Alignment:
Q  142 ttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||||| ||||||||||||  ||||||||  |||||||||||||| |||||||||    
T  35596 ttagggttaataggtctttaccccctaaaatataggtcacttttggttttgccccctgtaaa 35657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 698 - 636
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    ||||||||||||||| ||||||||| ||||||||||||  | || ||||||| | ||||||||    
T  698 ttttagggttaataggtctttaccctctgtaatataggtcatttatggttttcccccctgtaa 636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 9919 - 9966
Alignment:
Q  144 agggttaatagatctttaccccctgtaatataggatacttttggtttt 191  Q
    |||||||||| | ||||||||||||||||||||| |||||||||||||    
T  9919 agggttaataaaactttaccccctgtaatatagggtacttttggtttt 9966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0933 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 2775 - 2717
Alignment:
Q  145 gggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||  |||||||||||||||||||| ||||||||| ||||| || ||||||    
T  2775 gggttaatagagttttaccccctgtaatatagggtacttttggatttgccccatgtaaa 2717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 37447 - 37389
Alignment:
Q  145 gggttaatagatctttac-cccctgtaatataggatacttttggttttgctccctgtaa 202  Q
    |||||||||||  ||||| ||||||| ||||||||||||||||||||||| ||||||||    
T  37447 gggttaatagagttttacacccctgtcatataggatacttttggttttgccccctgtaa 37389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 227366 - 227423
Alignment:
Q  142 ttagggttaatagatctttacc-ccctgtaatataggatacttttggttttgctccct 198  Q
    ||||||||||||| |||||||| ||||||||||||||  |||||||||||||| ||||    
T  227366 ttagggttaataggtctttacctccctgtaatataggtcacttttggttttgccccct 227423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 228645 - 228585
Alignment:
Q  145 gggttaatagatctttaccccc--tgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||| |||||||||||  |||||||||||  |||||| ||||||| |||||||||    
T  228645 gggttaataggtctttaccccccgtgtaatataggtcacttttagttttgccccctgtaaa 228585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0804 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0804
Description:

Target: scaffold0804; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 2732 - 2792
Alignment:
Q  144 agggttaatagatctttac-cccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||| ||||||| |||||||||||||||  ||||||||||||||  ||||||||    
T  2732 agggttaataggtctttactcccctgtaatatagggcacttttggttttgcctcctgtaaa 2792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 15870 - 15930
Alignment:
Q  143 tagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||| |||||| ||||||||||||| || |||||| ||||||  |||||||||    
T  15870 tagggttaataggtctttatcccctgtaatatatgacactttttgttttgtcccctgtaaa 15930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 17516 - 17465
Alignment:
Q  141 tttagggttaatagatctttaccccctgtaatataggatacttttggttttg 192  Q
    |||||||||||||| || ||| || |||||||||||| ||||||||||||||    
T  17516 tttagggttaataggtcattatcctctgtaatatagggtacttttggttttg 17465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 10349 - 10413
Alignment:
Q  139 attttagggttaatagatctttaccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||||||| | |||||||||| ||||||| |  | |||||||||| |||||||||||    
T  10349 attttagggttaataggtttttaccccctctaatataagtcatttttggttttcctccctgtaaa 10413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 175
Target Start/End: Original strand, 7854 - 7889
Alignment:
Q  140 ttttagggttaatagatctttaccccctgtaatata 175  Q
    ||||||||||||||| ||||||||||||||||||||    
T  7854 ttttagggttaataggtctttaccccctgtaatata 7889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 24995 - 24936
Alignment:
Q  145 gggttaatagatctttaccccct-gtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||||| ||||||||||| |||||||||| |||||||| |||||| |||| ||||    
T  24995 gggttaatagagctttacccccttgtaatatagggtacttttgattttgccccctataaa 24936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 23685 - 23743
Alignment:
Q  146 ggttaatagatctttaccccc-tgtaatataggatacttttggttttgctccctgtaaa 203  Q
    ||||||||| ||||||||||| ||||||||| || ||||||| |||||| |||||||||    
T  23685 ggttaataggtctttacccccatgtaatataagacacttttgattttgccccctgtaaa 23743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 110427 - 110468
Alignment:
Q  162 ccccctgtaatataggatacttttggttttgctccctgtaaa 203  Q
    |||||||||||||| |  ||||||||||||||||||||||||    
T  110427 ccccctgtaatatatgtcacttttggttttgctccctgtaaa 110468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 91049 - 91082
Alignment:
Q  144 agggttaatagatctttaccccctgtaatatagg 177  Q
    ||||||||||| ||||||||||||||||||||||    
T  91049 agggttaataggtctttaccccctgtaatatagg 91082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Complemental strand, 4484 - 4452
Alignment:
Q  145 gggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||| ||||||||||||||||||||||    
T  4484 gggttaataggtctttaccccctgtaatatagg 4452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Complemental strand, 34883 - 34851
Alignment:
Q  145 gggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||| ||||||||||||||||||||||    
T  34883 gggttaataggtctttaccccctgtaatatagg 34851  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 1827 - 1859
Alignment:
Q  145 gggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||| ||||||||||||||||||||||    
T  1827 gggttaataggtctttaccccctgtaatatagg 1859  T

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Target: scaffold0010 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 26308 - 26340
Alignment:
Q  145 gggttaatagatctttaccccctgtaatatagg 177  Q
    |||||||||| ||||||||||||||||||||||    
T  26308 gggttaataggtctttaccccctgtaatatagg 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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