View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19743_high_4 (Length: 256)
Name: NF19743_high_4
Description: NF19743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19743_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 99 - 237
Target Start/End: Complemental strand, 36206800 - 36206658
Alignment:
| Q |
99 |
ttcaaactaaggttcaattgtaatgaattactatatata----gtgcaaatgcaatgggcaatgaaagatgcaaattcaagtctgatctaaaaattatta |
194 |
Q |
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| T |
36206800 |
ttcaaactaaggtccgatcgtcatgaattactatatatatatagtgcaaatgcaatgggcaatcaaagatgcaaatttgagtctgatctaaaaattatta |
36206701 |
T |
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| Q |
195 |
ggaaataagttatagcgaattaagaagagaatagagatggcag |
237 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||| |
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| T |
36206700 |
ggaaattagttatagcgaattaagaagagaatagagatggcag |
36206658 |
T |
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