View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19745_high_5 (Length: 431)
Name: NF19745_high_5
Description: NF19745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19745_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 379; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 16 - 425
Target Start/End: Complemental strand, 2304688 - 2304281
Alignment:
| Q |
16 |
atggtaaactaaagctggctaaagtttaaattctggttaaaagaaatactcatattaaagataaacgttaaatatgtgacatgtccacacaaaaataaaa |
115 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
2304688 |
atggtaaactaaagctggctaaagtttaaattctggttaaaagaaatactcatattaaagataaacgttaaatatgtgacatgtccacacaaaaacaaaa |
2304589 |
T |
|
| Q |
116 |
tcttctatatggttctgtatttcatggctttggtgataggagcatggacttatttcttcattgcaattatgtcagttgcagcatcaaaatcatcaccact |
215 |
Q |
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|||||||| |||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2304588 |
tcttctat--ggttctgtctttaatggctttggtgataggagcatggacatatttcttcattgcaattatgtcagttgcagcatcaaaatcatcaccact |
2304491 |
T |
|
| Q |
216 |
acaactagagaaagaagcacaagctcttgttaacagtgcttggtggaatgacttcaccaaccatgctccaactcgttgtcaatggccaggtataacatgc |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2304490 |
acaactagagaaagaagcacaagctcttgttaacagtggttggtggaatgacttcaccaaccatgctccaactcgttgtcaatggccaggtataacatgc |
2304391 |
T |
|
| Q |
316 |
aacaatgaaggaagcattacaaacatttcattgccacctgaaattcaattaggagacaagtttggtaaattccatttctcatctttcacaaaccttgttc |
415 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2304390 |
aacaatgaaggaagcattacaaacatttcattgccacctgaaattcaattaggagacaagtttggtaaattccatttctcatctttcacaaaccttgttc |
2304291 |
T |
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| Q |
416 |
accttaattt |
425 |
Q |
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|||||||||| |
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| T |
2304290 |
accttaattt |
2304281 |
T |
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