View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19746_low_1 (Length: 483)
Name: NF19746_low_1
Description: NF19746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19746_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 441; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 1 - 464
Target Start/End: Complemental strand, 37029626 - 37029162
Alignment:
| Q |
1 |
gtagtacacggataaacgacaaggtcggcgaagatcatcgcatactaatgataaggtcaaagtgttgcaccagagtcttattacttgattcattaataac |
100 |
Q |
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| T |
37029626 |
gtagtacacggataaacgacaaggtcggcgaagatcatcgcatactaatgataaggtcaaagtgttgcaccagagtcttattacttgattcattaataac |
37029527 |
T |
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| Q |
101 |
tataatacagaccttcaattcaactggaaacagtatatgtcatcattgttacagctgggggaatctcatcaaaatatctcccctttcaactatataactg |
200 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37029526 |
tataatacagaccttcaaatcaactggaaacagtatatgtcatcattgttacagctgggggaatctcatcaaaatatctcccctttcaactatataactg |
37029427 |
T |
|
| Q |
201 |
aaagaaagacgaactaaacacccatttgactactcttgtgtcccccaatcctcagaaataactggaaatgaccattttaccaactttaactcctcaccaa |
300 |
Q |
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|||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
37029426 |
aaagaaagacgatctaaacacccatttgactagtcttgtgtcccccaatcctcagaaataactggaaatgaccagtttaccaactttaactcctcaccaa |
37029327 |
T |
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| Q |
301 |
agcaaaagagcataggttttgaggtaatatttcttagtttttcgattttttcatgattctcccgagagaaaccctttta-tgtatgtctaaaacacatgt |
399 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
37029326 |
agcaaaagagcataggttttgaggtaatatttcttagtttttcgattttttcatgattctcccgagagaaacccttttattgtatgtctaaaacacatgt |
37029227 |
T |
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| Q |
400 |
aatatataacttcttcgacatgcattttcttagttgaactttaaaaatgcttcattagataatag |
464 |
Q |
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| T |
37029226 |
aatatataacttcttcgacatgcattttcttagttgaactttaaaaatgcttcattagataatag |
37029162 |
T |
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