View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19747_high_14 (Length: 326)
Name: NF19747_high_14
Description: NF19747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19747_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 40561956 - 40561646
Alignment:
| Q |
1 |
tgcattcgtgtggggctgtatgtggtggtgttctgggtggggggtgtgaagaggaaattgagagattgaggaaatttgggtactatgttggaatcattca |
100 |
Q |
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| T |
40561956 |
tgcattcgtgtggggctgtatgtggtggtgttctgggtggggggtgtgaagaggaaattgagagattgaggaaatttgggtactatgttggaatcattca |
40561857 |
T |
|
| Q |
101 |
aggaatgataaaatggggattcaaggaagatcataaagaagttgttgaagcaagaaatttggcaatcctggaactaaagttttttaaggataaagaggtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
40561856 |
aggaatgataaaatggggattcaaggaagatcataaagaagttgttgaagcaagaaatttggcaatccaggaactaaagttttttaaggataaagaggtt |
40561757 |
T |
|
| Q |
201 |
gatgcaattaaaactttcttgaatatttaaatctcttgattatatatggagtattattcatgttaggatgtggattaata-atatatatctatactatag |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |
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| T |
40561756 |
gatgcaattaaaactttcttgaatatttaaatctcttgattatatatggagtattattcatgttaggatgtggattaatatatatatctctatactatag |
40561657 |
T |
|
| Q |
300 |
catatagataa |
310 |
Q |
| |
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||||||||||| |
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| T |
40561656 |
catatagataa |
40561646 |
T |
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