View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19747_high_4 (Length: 457)
Name: NF19747_high_4
Description: NF19747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19747_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 410; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 1 - 442
Target Start/End: Complemental strand, 28899785 - 28899344
Alignment:
| Q |
1 |
tttatcaatatatagctttctggtgtcataaattatgagtgctttggggtgttttcggaacactgcatcctcttcaatttggctgcgggttggtgttagt |
100 |
Q |
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| T |
28899785 |
tttatcaatatatagctttctggtgtcataaattatgagtgctttggggtgttttcagaacactgcatccacttcaatttggctgcggattggtgttagt |
28899686 |
T |
|
| Q |
101 |
gtaagaagtcatatgtctaaattaactgcttattagatttaagattatgatttgtccaaagttgtaggcttttttatagcatgtttgaaaccccgaccaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
28899685 |
ataagaagtcatatgtctaaattaactgcttattagatttaagattatgatttgtccaaagctgtaggcttttttatagcatgtttgaaaccccgaccaa |
28899586 |
T |
|
| Q |
201 |
atgcctttcattcgcgcatccagcaaaagctaggaatcctggcttcttatattcacagaaaatacgatattgggacgcaagaaatgtatgccaaacacga |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
28899585 |
atgcctttcattcgcgcatccagcaaaagctaggaatcctggcttcttatattcacagaaaatacgatattgggacgcaagaaatgtataccaaacacga |
28899486 |
T |
|
| Q |
301 |
aaccaaacacaccataaataggttggagtcaatatattaaacttagttgtggatgaatgggatttgtttcttgaaagattattttgttcttttagctatt |
400 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
28899485 |
aaccaaacacaccataaataggttggagtcaatatattaaacttagttgtggatgaatgggatttgtttcttgaaaggttattttgttcttttagctatt |
28899386 |
T |
|
| Q |
401 |
agcctattgttaacttgttgtcttcgctttgatattgtaggt |
442 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||| |
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| T |
28899385 |
agcctattgttaacttgttgtctttgctttgatattgtaggt |
28899344 |
T |
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