View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19747_low_14 (Length: 335)
Name: NF19747_low_14
Description: NF19747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19747_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 19 - 329
Target Start/End: Original strand, 28899809 - 28900138
Alignment:
| Q |
19 |
catccaatttaaagtactccctttcatatttcaaattttggaaccaaatagatcatgccctttttcaggtctttgaccaagcact--------------- |
103 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
28899809 |
catccaatttaaagtactccctttcatatttcaaattttggaaccaaatagatcatgccctttttcaggtctttaaccaagcacttcccacatactagta |
28899908 |
T |
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| Q |
104 |
----aaccttgggaaaaagaagataaaagtgttcaattaagacatgcacaaacttaaaatgattaatcacaccataaaagcaaaaaatataggtacaaat |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
28899909 |
tcataaccttgggaaaaagaagataaaagtgttcaattaagacatgcacaaacttaaaatgattaatcacactataaaagcaaaaaatataggtacaaat |
28900008 |
T |
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| Q |
200 |
agagctagcaaatagcagctatagcgctattacatagcagaactcaaacaaaccgttattgttccgtgataacagaaggcagtgtagcactatatagcat |
299 |
Q |
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||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28900009 |
agagctagcaaatagcagctatagcgctattacatagaagaattcaaacaaaccgttattgttccgtgataacagaaggcagtgtagcactatatagcat |
28900108 |
T |
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| Q |
300 |
agcagaatttgaataaactgatattcttcg |
329 |
Q |
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||||||||||||||||||||||||| |||| |
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| T |
28900109 |
agcagaatttgaataaactgatatttttcg |
28900138 |
T |
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